HCMV基因在人和小鼠胚胎成纤维细胞中表达的差异性研究

人巨细胞病毒（human cytomegalovirus, HCMV）种属特异性机制尚不清楚。研究通过检测HCMVADl69体外感染人胚胎成纤维细胞（Human embryo fibroblast, HEF）和小鼠胚胎成纤维细胞（mouse embryo fibroblast, MEF）后病毒基因的表达情况,探讨HCMV种属特异性的可能分子机制。首先用HCMV AD169（MOI=5）分别感染HEF和MEF,相差显微镜逐日观察细胞的形态学变化;RT—PCR检测HCMV即刻早期（IE1、IE2）、早期（uL84）和晚期基因（UL83）的表达情况;Western—blot和免疫荧光检测病毒基因编码蛋白表达的情况。形态学观察发现HEF感染HCMV后逐渐变大变圆并相互融合,第4天可见典型的HCMV特征性病变效应,而MEF则未出现上述的变化;RT-PCR和Western—blot表明HEF组表达即刻早期基因IE1和IE2、早期基因uL84和晚期基因UL83 mRNA以及各基因所编码的蛋白,且相对表达量显著高于模拟感染组（P〈0．01）;而MEF组仅IEl和IE2mRNA和蛋白相对表达量显著低于HEF组（P〈0．05）,而高于模拟感染组（P〈0．01）。免疫荧光检测发现HEF感染72h表达IE和UL83蛋白,而MEF则无明显表达。以上结果表明,HC—MV不能在MEF中复制并产生完整子代病毒颗粒,且病毒基因表达阻止在IE2基因表达之后和UL84基因表达之前,其种属特异性可能与即刻早期蛋白低水平的表达量有关。     

4℃保存的绵羊皮肤成纤维细胞的培养及冷冻

为了探讨利用死亡珍稀动物皮肤建立成纤维细胞库的方法,本研究采集幼龄绵羊耳廓皮肤,在4℃条件下保存0 h(对照组)、24 h、48 h和72 h后进行原代培养,达到85%汇合后再进行了继代培养或者经冷冻-复苏后继代培养。结果:(1)与对照组相比,各保存组皮肤成纤维细胞经原代培养后达到85%汇合时间滞后(分别为4 d和8d~15 d);(2)各保存组成纤维细胞经4代培养后,与对照组继代培养达到85%汇合时间相同(对照组继代培养第1~4代均为4 d);(3)原代培养成纤维细胞通过冷冻-复苏后经第2代培养,即可在4 d内均达到85%汇合。表明动物死亡后立即采取其耳廓皮肤并在4℃下保存一段时间后,经原代培养和继代培养,或经原代培养、冷冻-复苏和继代培养,可获得具有正常继代能力的成纤维细胞。     

表达红色荧光及转胸腺素β4基因绵羊胎儿成纤维细胞系的制备

旨在构建胸腺素β4(thymosin beta4,Tβ4)基因真核表达载体并转染绵羊胎儿成纤维细胞,获得稳定表达胸腺素β4及红色荧光蛋白的转基因细胞克隆。将克隆载体pMD19TT中的胸腺素β4基因亚克隆到表达载体pIRES2-DsRed2的多克隆位点,构建表达载体pIRES2-DsRed2-Tβ4,脂质体介导转染绵羊胎儿成纤维细胞,G418筛选获得稳定转染的细胞克隆。RT-PCR检测Tβ4基因在宿主细胞中的转录。测序结果显示,构建的表达载体pIRES2-DsRed2-Tβ4序列中,Tβ4基因正确连接在CMV启动子下游,顺序连接IRES2序列和红色荧光蛋白基因,载体构建正确。脂质体介导的稳定转染效率约为15%,经G418筛选得到转基因细胞克隆并高效表达红色荧光蛋白。RT-PCR检测显示外源Tβ4基因在绵羊胎儿成纤维细胞中得到转录。成功构建具有红色荧光蛋白和新霉素抗性双选择标记的胸腺素β4基因真核表达载体并稳定转染绵羊胎儿成纤维细胞,筛选得到的超表达胸腺素β4绵羊胎儿成纤维细胞系为下一步通过核移植和克隆技术获得转基因绵羊提供了条件。     

Smad4基因siRNA表达载体的构建与鉴定

目的:以Smad4基因为靶标构建小干扰RNA(siRNA)真核表达载体.方法:根据GenBank公布的人Smad4核酸序列及SiRNA设计原则,用AmbionRNAi在线软件,筛选得到2个19 bp片段为靶序列,合成两端带有Bam H Ⅰ、HindⅢ酶切位点的发夹结构寡核苷酸序列,经过退火,将此序列克隆到真核表达质粒pSilencerTM3.1-H1 neo vector中,构建成重组质粒,酶切及测序验证.脂质体介导转染人原代增生性瘢痕成纤维细胞,经G418筛选细胞克隆,并用RT-PCR检测Smad4基因的表达.结果:成功构建了pSilencerTM3.1.H1 neo-Smad4 shRNA表达载体克隆,插入片段测序结果与合成的siRNA序列一致.RT-PCR结果显示转染shRNA1、shRNA2重组质粒的成纤维细胞内Smad4 mRNA水平均降低,其中以pSilencerTM3.1-H1-Smad4 shRNA1更为明显(P＜0.01).结论:构建P-Smad4 shRNA袁达载体成功,为进一步研究Smad4基因的RNA干扰奠定了基础.     

青鳉p53基因克隆、结构分析及同源重组载体构建

应用“Long PCR”技术 ,用 6对 p5 3引物从青胚胎干细胞基因组DNA中扩增出 6个相互重叠的片段 ,其中最大的片段长达 4 5kb ,这 6个PCR片段覆盖了整个 p5 3基因。序列分析表明青p5 3基因长约 8 7kb ,由 11个外显子和 10个内含子组成。结构比较表明 ,青 p5 3基因在大小上与人和小鼠 p5 3基因存在较大差异。青p5 3基因的内含子 1仅为 0 85kb ,而人和小鼠p5 3基因的内含子 1则分别长达 10kb和 6kb ;青 p5 3基因的外显子 3(86bp)明显大于人和小鼠 p5 3基因的外显子 3(2 2bp) ;外显子 4 (170bp)比人 (2 80bp)和小鼠 (2 6 0bp)的外显子 4小 ;内含子 10 (3 5kb)则比人和小鼠内含子 10 (0 7kb和 0 9kb)大得多。用SVTK neo基因作正选择标记基因 ,用SVTK tk基因作负选择标记基因 ,用青 p5 3基因组片段作同源序列 ,构建了鱼类 p5 3基因同源重组载体。将此载体转染青胚胎干细胞 ,并经G4 18和Ganc药物选择后证明上述正、负选择标记基因在干细胞中能够有效表达 ,并提供对G4 18的抗性和对Ganc的敏感性。     

利用TALE-TFs在小鼠成纤维细胞中激活β-酪蛋白基因启动子表达载体

目的利用TALE-TFs,在小鼠成纤维细胞中激活β-酪蛋白基因启动子,为检测β-酪蛋白基因启动子—目的基因表达框的表达结果,提供一种检测途径。方法将构建的TALE-TFs和β-酪蛋白基因启动子—Red报告基因质粒电转染进入小鼠成纤维细胞,通过荧光显微镜直接观察报告基因表达情况。结果与结论利用TALE人工转录因子,在小鼠成纤维细胞中能够激活β-酪蛋白基因启动子表达框,为替代乳腺上皮细胞表达验证系统提供了新的途径。     

腺病毒载体介导的GFP基因在鸭胚成纤维细胞中的表达及RNA干扰

目的：建立在鸭胚成纤维细胞（DEF）中进行RNA干扰（RNAi）的技术平台,为鸭基因组功能的研究提供新的技术手段。方法：以绿色荧光蛋白（GFP）基因为报告基因,脂质体转染化学合成的GFP特异小干扰RNA（GFP-siRNA）,用流式细胞仪测定GFP-siRNA对重组腺病毒（Adv-GFP）介导的GFP基因在DEF中表达的干扰效果。结果：200MOI（感染复数）Adv-GFP介导的GFP基因在DEF中表达效率最高,为31．20％±3．1l％,对DEF的活力无明显影响;GFP-siRNA能有效干扰GFP基因在DEF中的表达,相对抑制率为98．56％。结论：在DEF中进行RNAi是可行的,Adv-GFP是介导外源基因在DEF中表达较为理想的载体;首次建立了在DEF中进行RNAi的技术平台,为鸭基因组的功能等研究提供了新的技术手段。     

绵羊胎儿成纤维细胞不同处理对核移植重构胚发育的影响

研究供体细胞代数、大小、周期以及基因转染处理对重构胚发育的影响. 结果如下: (i)体外培养5~7代细胞做供体核, 重构胚的桑椹/囊胚率显著高于16~18代细胞的桑椹/囊胚率(17.3% vs. 4.9%, P < 0.05); (ii) 15~25 μm细胞做供体核, 重构胚的桑椹/囊胚率为20.0%, 高于8~15 mm细胞、25~33 μm细胞桑椹/囊胚率(8.0%, 9.7%), 但效果不显著(P > 0.05); (iii) 血清饥饿与非血清饥饿的细胞做供体核, 重构胚的桑椹/囊胚发育率没有显著性差异(11.8% vs. 18.6%, P > 0.05), 但非血清饥饿的效果要好于血清饥饿; (iv) 用0.05 μmol/L秋水仙素处理供体细胞效果最好, 重构胚的桑椹/囊胚率可达27.5%, 而未处理或用0.1 μmol/L秋水仙素处理供体细胞, 重构胚的桑椹/囊胚率分别为17.1%和12.1%, 但三者之间差异不显著(P > 0.05); (v) 以转染绿色荧光蛋白基因(GFP)细胞做供体核, 重构胚的桑椹/囊胚率显著低于非转基因细胞做供体核的桑椹/囊胚率(3.1% vs. 20.4%, P < 0.05). 上述结果表明, 传代少、中等大小的细胞更适合做供体核; 血清饥饿没有必要; 用0.05 μmol/L秋水仙素处理供体细胞有利于重构胚的发育; 转基因供体细胞对重构胚发育有影响.     

过表达ω-3多不饱和脂肪酸脱氢酶基因fat-1保护小鼠胚胎成纤维细胞避免凋亡

由于膳食原因,人体摄入ω-6PUFAs/ω-3PUFAs比例过高,脂类代谢严重失衡.鉴于ω-3PUFAs获取困难而且人体无催化ω-6PUFAs向ω-3PUFAs转化的ω-3多不饱和脂肪酸脱氢酶,本研究体外扩增来源于秀丽线虫(Caenorhabditis elegans)的ω-3多不饱和脂肪酸脱氢酶基因（fat-l）cDNA,构建了真核表达载体pEGFPC1-fat-1,将该基因转染入小鼠胚胎成纤维细胞;激发荧光与RT-PCR方法检测转染pEGFPC1-fat-1细胞表达该基因,气相色谱分析显示该转染细胞中ω-6PUFAs/ω-3PUFAs的比例降低;细胞抑制率实验显示转染细胞的MTT吸光值升高（P <0.05）;双染法流式细胞仪分析转染细胞凋亡降低,结果表明fat-1基因即使在高浓度ω-6PUFAs的细胞毒作用下,依然能够发挥将ω-6PUFAs脱氢转化为与ω-3PUFAs的生理功能,抑制3T3细胞凋亡,促进细胞生长增殖,实现了较强的细胞保护功能.     

慢病毒重组同源盒基因HOXA4表达载体的构建及其感染人脐带间充质干细胞的实验性研究

目的 构建携带同源基因HOXA4的慢病毒表达载体,并测定其对人脐带间充质干细胞的感染效率.方法 使用酶切及PCR技术从含有HOXA4基因的质粒克隆模版HOXA4-MSCV逆转录载体中获取目的 基因HOXA4,并将HOXA4基因重组到慢病毒载体表达质粒上Lenti-GFP-CTB,通过酶切、测序验证HOXA4基因后,将Lenti-GFP-HOXA4质粒、和辅助包装质粒pRsv-REV、pMDlg-pRRE、PMD2G共同转染人胚胎肾上皮细胞系293T细胞,获得携带HOXA4基因的重组慢病毒Lentiviral-HOXA4;然后感染人脐带间充质干细胞,通过荧光显微镜及流式细胞术检测其感染效率.结果 成功构建携带HOXA4基因的慢病毒表达载体Lentiviral-HOXA4,并获得高纯度的慢病毒浓缩液.经检测病毒滴度达2.11×108 TU/ml.成功转染HOXA4基因的脐带间充质干细胞表达绿色荧光蛋白,当病毒感染复数（MOI）值为60时转染效率最高,达（95.4±4.3）%.结论 成功构建携带人HOXA4基因的慢病毒,并可以在体外有效转染人脐带间充质干细胞.     

Genistein-induced DNA damage is repaired by nonhomologous end joining and homologous recombination in TK6 cells

Genistein (GES), a phytoestrogen, has potential chemopreventive and chemotherapeutic effects on cancer. The anticancer mechanism of GES may be related with topoisomerase II associated DNA double-strand breaks (DSBs). However, the precise molecular mechanism remains elusive. Here, we performed genetic analyses using human lymphoblastoid TK6 cell lines to investigate whether non-homologous DNA end joining (NHEJ) and homologous recombination (HR), the two major repair pathways of DSBs, were involved in repairing GES-induced DNA damage. Our results showed that GES induced DSBs in TK6 cells. Cells lacking Ligase4, an NHEJ enzyme, are hypersensitive to GES. Furthermore, the sensitivity of Ligase4^−/− cells was associated with enhanced DNA damage when comparing the accumulation of γ-H2AX foci and number of chromosomal aberrations (CAs) with WT cells. In addition, cells lacking Rad54, a HR enzyme, also presented hypersensitivity and increased DNA damages in response to GES. Meanwhile, Treatment of GES-lacking enhanced the accumulation of Rad51, an HR factor, in TK6 cells, especially in Ligase4^−/−. These results provided direct evidence that GES induced DSBs in TK6 cells and clarified that both NHEJ and HR were involved in the repair of GES-induced DNA damage, suggesting that GES in combination with inhibition of NHEJ or HR would provide a potential anticancer strategy.     

Increased efficiency of homologous recombination in ES cells by cleavage at both ends of homology in the targeting vector

Transgenic Research -     

Factors affecting the efficiency of introducing precise genetic changes in ES cells by homologous recombination: tag-and-exchange versus the Cre-loxp system

The introduction of genetic modifications in specific genes by homologous recombination provides a powerful tool for elucidation of structure-function relationships of proteins of biological interest. Presently, there are several alternative methods of homologous recombination that permit the introduction of small genetic modifications in specific loci. Two of the most widely used methods are the tag-and-exchange, based on the use of positive--negative selection markers, and the Cre-loxP system, based on the use of a site-specific recombinase. The efficiency of detection of targeting events at different loci using the two systems was compared. Additionally, we analysed how the distance between two gene markers placed within the region of homology of a targeting vector affects the rate at which both markers are introduced into the locus during the homologous recombination event. Our results indicate that the method based on the use of positive--negative selection markers was les s efficient than the Cre-loxP based system, irrespective of locus or type of positive--negative selection. It was also determined that as the distance between the selectable marker and the genetic modification being introduced increases, there is a progressive reduction in the efficiency of detecting events with the desired genetic modification     

RNA polymerase III is required for the repair of DNA double-strand breaks by homologous recombination

1. Download : Download high-res image (94KB)
2. Download : Download full-size image

     

Elevated levels of intrachromosomal homologous recombination in Arabidopsis overexpressing the MIM gene

The Arabidopsis MIM gene encodes a protein belonging to the SMC family (structure maintenance of chromosomes) which is required for intrachromosomal homologous recombination (ICR). Both ICR and MIM gene expression are enhanced by DNA-damaging treatments, suggesting that MIM is a factor limiting DNA repair by homologous recombination (HR) under genotoxic stress. We tested this hypothesis by measuring the levels of recombination in the mim mutant under genotoxic stress, using methyl methanesulfonate. Although the mutant clearly showed diminished basal and induced levels of ICR, enhancement of ICR by DNA-damaging treatments was similar to that observed in the wild type. This suggests that the MIM gene product is required for DNA repair by HR, but is not critical for HR induction. To determine whether enhanced availability of MIM would increase basal HR levels in Arabidopsis, we examined ICR frequencies in transgenic Arabidopsis strains overexpressing the MIM gene after ectopic insertion of additional MIM copies. Two independent lines showed a twofold increase in ICR frequency relative to the wild type. Thus MIM is required for efficient ICR in plants, and its manipulation can be used to change homologous recombination frequencies. Since MIM is one of the components responsible for chromatin dynamics, our results suggest that the chromatin environment determines the frequency of homologous recombination.     

Efficient gene targeting and removal of foreign DNA by homologous recombination in the picoeukaryote Ostreococcus

With fewer than 8000 genes and a minimalist cellular organization, the green picoalga Ostreococcus tauri is one of the simplest photosynthetic eukaryotes. Ostreococcus tauri contains many plant‐specific genes but exhibits a very low gene redundancy. The haploid genome is extremely dense with few repeated sequences and rare transposons. Thanks to the implementation of genetic transformation and vectors for inducible overexpression/knockdown this picoeukaryotic alga has emerged in recent years as a model organism for functional genomics analyses and systems biology. Here we report the development of an efficient gene targeting technique which we use to knock out the nitrate reductase and ferritin genes and to knock in a luciferase reporter in frame to the ferritin native protein. Furthermore, we show that the frequency of insertion by homologous recombination is greatly enhanced when the transgene is designed to replace an existing genomic insertion. We propose that a natural mechanism based on homologous recombination may operate to remove inserted DNA sequences from the genome.     

Efficient gene targeting in ligase IV-deficient Monascus ruber M7 by perturbing the non-homologous end joining pathway

Inactivating the non-homologous end joining (NHEJ) pathway is a well established method to increase gene replacement frequency (GRF) in filamentous fungi because NHEJ is predominant for the repair of DNA double strand breaks (DSBs), while gene targeting is based on homologous recombination (HR). DNA ligase IV, a component of the NHEJ system, is strictly required for the NHEJ in Saccharomyces cerevisiae and Neurospora crassa. To enhance the GRF in Monascus ruber M7, we deleted the Mrlig4 gene encoding a homolog of N. crassa DNA ligase IV. The obtained mutant (MrΔlig4) showed no apparent defects in vegetative growth, colony phenotype, microscopic morphology, spore yield, and production of Monascus pigments and citrinin compared with the wild-type strain (M. ruber M7). Gene targeting of ku70 and triA genes revealed that GRF in the MrΔlig4 strain increased four-fold compared with that in the wild-type strain, reached 68 % and 85 %, respectively. Thus, the MrΔlig4 strain is a promising host for efficient genetic manipulation. In addition, the MrΔlig4 strain is more sensitive than M. ruber M7 to a DNA-damaging agent, methyl methanesulfonate.