Carbon reservoir perturbations induced by Deccan volcanism: Stable isotope and biomolecular perspectives from shallow marine environment in Eastern India

The Deccan Traps in Western India is hypothesized to have caused significant fluctuations in climatic condition and organic matter (OM) productivity across the Cretaceous-Paleogene Boundary (K/PgB). The periodic release of large amounts of volatiles into the atmosphere is thought to drive these changes. Yet, direct impact of volcanism on the carbon cycle and ecosystem remains relatively unconstrained. For the first time, we attempt to trace changes in both marine and terrestrial carbon reservoirs from pre- and intervolcanic sedimentary units (infra- and inter-trappeans respectively) from Rajahmundry, ~1500 km SE of main eruption sites in Western India. Molecular level characterization of OM and stable isotope composition of carbonates (δ¹³C_carb), bulk OM (δ¹³C_org), and n-alkane (δ¹³C_alk and δD_alk) have been analysed to provide a chemo-stratigraphic framework. In Rajahmundry, high CO₂ concentration estimated from infra-trappean carbonate nodule is synchronous with the onset of the Deccan Traps and the Late Maastrichtian warming episode. Impact of the warming event is reflected in Rajahmundry from a major shift in the terrestrial ecosystem. Marine OM production also seems to have been low throughout the infra-trappean. A steady decrease in δ¹³C_carb values, increase in mortality rates and dwarfism in invertebrates immediately below the first volcanic units in Rajahmundry suggest stressed conditions from eruption in the western part of India ~40–60 kyrs prior to K/PgB. A significant increase in heterotrophic activity is observed after the volcanic deposits in Rajahmundry that seems to have controlled the marine carbon reservoir for a maximum of ~200 kyrs after the boundary. Advent of pteridophytes, increase in carbon content and positive shifts in δ¹³C_carb and δ¹³C_alk values in the upper inter-trappean units mark the onset of recovery in terrestrial and marine environments. Overall, our results suggest significant perturbations in the carbon reservoir as a consequence of the Deccan eruption.     

Photodegradation leads to increased carbon dioxide losses from terrestrial organic matter

CO₂ production in terrestrial ecosystems is generally assumed to be solely biologically driven while the role of abiotic processes has been largely overlooked. In addition to microbial decomposition, photodegradation – the direct breakdown of organic matter (OM) by solar irradiance – has been found to contribute to litter mass loss in dry ecosystems. Previous small‐scale studies have shown that litter degradation by irradiance is accompanied by emissions of CO₂. However, the contribution of photodegradation to total CO₂ losses at ecosystems scales is unknown. This study determined the proportion of the total CO₂ losses caused by photodegradation in two ecosystems: a bare peatland in New Zealand and a seasonally dry grassland in California. The direct effect of solar irradiance on CO₂ production was examined by comparing daytime CO₂ fluxes measured using eddy covariance (EC) systems with simultaneous measurements made using an opaque chamber and the soil CO₂ gradient technique, and with night‐time EC measurements under the same soil temperature and moisture conditions. In addition, a transparent chamber was used to directly measure CO₂ fluxes from OM caused by solar irradiance. Photodegradation contributed 19% of the annual CO₂ flux from the peatland and almost 60% of the dry season CO₂ flux from the grassland, and up to 62% and 92% of the summer mid‐day CO₂ fluxes, respectively. Our results suggest that photodegradation may be important in a wide range of ecosystems with exposed OM. Furthermore, the practice of partitioning daytime ecosystem CO₂ exchange into its gross components by assuming that total daytime CO₂ losses can be approximated using estimates of biological respiration alone may be in error. To obtain robust estimates of global ecosystem–atmosphere carbon transfers, the contribution of photodegradation to OM decomposition must be quantified for other ecosystems and the results incorporated into coupled carbon–climate models.     

Significance of ocean carbonate budgets for the global carbon cycle

Changes in the trace gas composition of the atmosphere over glacial–interglacial cycles are linked to changes in the oceanic carbon cycle. This paper examines the role of biologically driven fluxes of organic and inorganic carbon in modifying the carbon dioxide chemistry of the oceans, and the corresponding implications for the partitioning of CO₂ between the atmosphere and ocean. Relevant details of the marine carbon system are presented together with an assessment of the significance of remineralization and dissolution processes. Recent estimates of the marine carbonate fluxes show significant uncertainties and inconsistencies which must be resolved in order to assess fully the role of the oceans' biota in the marine carbon system. Various types of ocean carbon cycle models have been developed in order to interpret the changes in past atmospheric carbon dioxide. Some take account of the role of the oceans' biota, focussing in the main on the cycling of organic matter. Relatively few have considered the role of the carbonate pump and the subtle interactions between organic and inorganic carbon cycling. The significance of carbonate formation and dissolution, and of the effects of global change on the marine carbonate system, for air–sea fluxes of CO₂ are discussed. Finally some recommendations for future research are made in order to improve our understanding of how spatial and temporal variation in marine carbonate fluxes, in conjunction with processes determining the oxidation and burial of organic matter in the oceans, affect levels of CO₂ in the atmosphere.     

Constraining future terrestrial carbon cycle projections using observation‐based water and carbon flux estimates

The terrestrial biosphere is currently acting as a sink for about a third of the total anthropogenic CO₂ emissions. However, the future fate of this sink in the coming decades is very uncertain, as current earth system models (ESMs) simulate diverging responses of the terrestrial carbon cycle to upcoming climate change. Here, we use observation‐based constraints of water and carbon fluxes to reduce uncertainties in the projected terrestrial carbon cycle response derived from simulations of ESMs conducted as part of the 5th phase of the Coupled Model Intercomparison Project (CMIP5). We find in the ESMs a clear linear relationship between present‐day evapotranspiration (ET) and gross primary productivity (GPP), as well as between these present‐day fluxes and projected changes in GPP, thus providing an emergent constraint on projected GPP. Constraining the ESMs based on their ability to simulate present‐day ET and GPP leads to a substantial decrease in the projected GPP and to a ca. 50% reduction in the associated model spread in GPP by the end of the century. Given the strong correlation between projected changes in GPP and in NBP in the ESMs, applying the constraints on net biome productivity (NBP) reduces the model spread in the projected land sink by more than 30% by 2100. Moreover, the projected decline in the land sink is at least doubled in the constrained ensembles and the probability that the terrestrial biosphere is turned into a net carbon source by the end of the century is strongly increased. This indicates that the decline in the future land carbon uptake might be stronger than previously thought, which would have important implications for the rate of increase in the atmospheric CO₂ concentration and for future climate change.     

Organic Biogeochemistry of Detrital Flocculent Material (Floc) in a Subtropical, Coastal Wetland

Flocculent materials (floc), in aquatic systems usually consist of a non-consolidated layer of biogenic, detrital material relatively rich in organic matter which represents an important food-web component for invertebrates and fish. Thus, variations in its composition could impact food webs and change faunal structure. Transport, remineralization rates and deposition of floc may also be important factors in soil/sediment formation. In spite of its relevance and sensitivity to external factors, few chemical studies have been carried out on the biogeochemistry of floc material. In this study, we focused on the molecular characterization of the flocculent organic matter (OM), the assessment of its origin and its environmental fate at five stations along a freshwater to marine ecotone, namely the Taylor Slough, Everglades National Park (ENP), Florida. To tackle this issue, suspended, unconsolidated, detrital floc samples, soils/sediments and plants were analyzed for bulk properties, biomarkers and pigments. Both geochemical proxies and biomass-specific biomarkers were used to assess OM sources and transformations. Our results show that the detrital organic matter of the flocculent material is largely regulated by local vegetation inputs, ranging from periphyton, emergent and submerged plants and terrestrial plants such as mangroves, with molecular evidence of different degrees of diagenetic reworking, including fungal activity. Evidence is presented for both hydrodynamic transport of floc materials, and incorporation of floc OM into soils/sediments. However, some molecular parameters showed a decoupling between floc and underlying soil/sediment OM, suggesting that physical transport, incorporation and degradation/remineralization of OM in floc may be controlled by a combination of a variety of complex biogeochemical variables including hydrodynamic transport, hydroperiod characteristics, primary productivity, nutrient availability, and OM quality among others. Further investigations are needed to better understand the ecological role of floc in freshwater and coastal wetlands.     

Paradigm shifts in soil organic matter research affect interpretations of aquatic carbon cycling: transcending disciplinary and ecosystem boundaries

New conceptual models that highlight the importance of environmental, rather than molecular, controls on soil organic matter affect interpretations of organic matter (OM) persistence across terrestrial and aquatic boundaries. We propose that changing paradigms in our thinking about OM decomposition explain some of the uncertainties surrounding the fate of land-derived carbon (C) in marine environments. Terrestrial OM, which historically has been thought to be chemically recalcitrant to decay in soil and aquatic environments, dominates inputs to rivers yet is found in trace amounts in the ocean. We discuss three major transformations in our understanding of OM persistence that influence interpretations of the fate of aquatic OM: (1) a shift away from an emphasis on chemical recalcitrance as a primary predictor of turnover; (2) new interpretations of radiocarbon ages, which affect predictions of reactivity; and (3) the recognition that most OM leaving soils in dissolved form has been microbially processed. The first two explain rapid turnover for terrigenous OM in aquatic ecosystems once it leaves the soil matrix. The third suggests that the presence of terrestrial OM in aquatic ecosystems may be underestimated by the use of plant biomarkers. Whether these mechanisms occur in isolation of each other or in combination, they provide insight into the missing terrestrial C signature in the ocean. Spatially and temporally varying transformations of OM along land–water networks require that common terrestrial source indicators be interpreted within specific environmental contexts. We identify areas of research where collaborations between aquatic and terrestrial scientists will enhance quantification of C transfer from soils to inland water bodies, the ocean, and the atmosphere. Accurate estimates of OM processing are essential for improving predictions of the response of vulnerable C pools at the interface of soil and water to changes in climate and land use.     

Biogeochemistry of organic carbon, CO2, CH4, and trace elements in thermokarst water bodies in discontinuous permafrost zones of Western Siberia

Active processes of permafrost thaw in Western Siberia increase the number of soil subsidencies, thermokarst lakes and thaw ponds. In continuous permafrost zones, this process promotes soil carbon mobilisation to water reservoirs, as well as organic matter (OM) biodegradation, which produces a permanent flux of carbon dioxide (CO₂) to the atmosphere. At the same time, the biogeochemical evolution of aquatic ecosystems situated in the transition zone between continuous permafrost and permafrost-free terrain remains poorly known. In order to better understand the biogeochemical processes that occur in thaw ponds and lakes located in discontinuous permafrost zones, we studied ~30 small (1–100,000 m²) shallow (<1 m depth) lakes and ponds formed as a result of permafrost subsidence and thaw of the palsa bog located in the transition zone between the tundra and forest-tundra (central part of Western Siberia). There is a significant increase in dissolved CO₂ and methane (CH₄) concentration with decreasing water body surface area, with the largest supersaturation with respect to atmospheric CO₂ and CH₄ in small (<100 m²) permafrost depressions filled with thaw water. Dissolved organic carbon (DOC), conductivity, and metal concentrations also progressively increase from large lakes to thaw ponds and depressions. As such, small water bodies with surface areas of 1–100 m² that are not accounted for in the existing lake and pond databases may significantly contribute to CO₂ and CH₄ fluxes to the atmosphere, as well as to the stocks of dissolved trace elements and organic carbon. In situ lake water incubation experiments yielded negligible primary productivity but significant oxygen consumption linked to the mineralisation rate of dissolved OM by heterotrophic bacterioplankton, which produce a net CO₂ flux to the atmosphere of 5 ± 2.5 mol C m² year^?1. The most significant result of this study, which has long-term consequences on our prediction of aquatic ecosystem development in the course of permafrost degradation is CO₂, CH₄, and DOC concentrations increase with decreasing lake age and size. As a consequence, upon future permafrost thaw, the increase in the number of small water bodies, accompanied by the drainage of large thermokarst lakes to the hydrological network, will likely favour (i) the increase of DOC and colloidal metal stocks in surface aquatic systems, and (ii) the enhancement of CO₂ and CH₄ fluxes from the water surface to the atmosphere. According to a conservative estimation that considers that the total area occupied by water bodies in Western Siberia will not change, this increase in stocks and fluxes could be as high as a factor of ten.     

Effects of plant species diversity, atmospheric [CO2], and N addition on gross rates of inorganic N release from soil organic matter

A significant challenge in predicting terrestrial ecosystem response to global changes comes from the relatively poor understanding of the processes that control pools and fluxes of plant nutrients in soil. In addition, individual global changes are often studied in isolation, despite the potential for interactive effects among them on ecosystem processes. We studied the response of gross N mineralization and microbial respiration after 6 years of application of three global change factors in a grassland field experiment in central Minnesota (the BioCON experiment). BioCON is a factorial manipulation of plant species diversity (1, 4, 9 and 16 prairie species), atmospheric [CO₂] (ambient and elevated: 560 μmol mol^?1), and N inputs (ambient and ambient +4 g N m^?2 yr^?1). We hypothesized that gross N mineralization would increase with increasing levels of all factors because of stimulated plant productivity and thus greater organic inputs to soils. However, we also hypothesized that N addition would enhance, while elevated [CO₂] and greater diversity would temper, gross N mineralization responses because of increased and reduced plant tissue N concentrations, respectively. In partial support of our hypothesis, gross N mineralization increased with greater diversity and N addition, but not with elevated [CO₂]. The ratio of gross N mineralization to microbial respiration (i.e. the ‘yield’ of inorganic N mineralized per unit C respired) declined with greater diversity and [CO₂] suggesting increasing limitation of microbial processes by N relative to C in these treatments. Based on these results, we conclude that the plant supply of organic matter primarily controls gross N mineralization and microbial respiration, but that the concentration of N in organic matter input secondarily influences these processes. Thus, in systems where N limits plant productivity these global change factors could cause different long‐term ecosystem trajectories because of divergent effects on soil N and C cycling.     

Ratio [13C]/[12C] as an index for express estimation of hydrocarbon-oxidizing potential of microbiota in soil polluted with crude oil

The hydrocarbon-oxidizing potential of soil microbiota and hydrocarbon-oxidizing microorganisms introduced into soil was studied based on the quantitative and isotopic characteristics of carbon in products formed in microbial degradation of oil hydrocarbons. Comparison of CO₂ production rates in native soil and that polluted with crude oil showed the intensity of microbial mineralization of soil organic matter (SOM) in the presence of oil hydrocarbons to be higher as compared with non-polluted soil, that is, revealed a priming effect of oil. The amount of carbon of newly synthesized organic products (cell biomass and exometabolites) due to consumed petroleum was shown to significantly exceed that of SOM consumed for production of CO₂. The result of microbial processes in oil-polluted soil was found to be a potent release of carbon dioxide to the atmosphere.     

Carbon isotopic composition in suspended organic matter and bottom sediments of the East Arctic seas

The samples of water and bottom sediments of the East Siberian and Chukchi Seas collected during the second Russian-American RUSALCA expedition were used to analyze patterns of the isotopic composition of carbon in the organic matter (OM) of suspended material (SOM) and bottom sediments (BOM). Similar to other marine environments, the SOM isotopic composition depended on the ratio between the terrigenous and planktonic OM, both in the water body as a whole and in its parts. Thus, in the East Siberian Sea the carbon of SOM was poorer in ¹³C (??¹³C = ?24.51??) than the open part of the more productive Chukchi Sea (??¹³C = ?22.16??). In the less productive coastal waters of the Chukchi Sea, the ratio of terrigenous OM increased, resulting in a ??¹³C shift to lower values (?23.40??). Due to the influx of reduced products of anaerobic diagenesis of the sediments, elevated total number of microorganisms and dark CO₂ fixation were found in the near-bottom water at the water-sediment biogeochemical barrier. The newly formed biomass of autotrophic microorganisms shifted the carbon isotopic composition of the near-bottom suspended material to more positive ??¹³C values, with the average values of ?23.39 and ?20.37?? for the East Siberian and Chukchi Sea, respectively. Changes in the carbon isotopic composition of OM resulting from microbial activity continued in the upper sediment layers. When the rate of biomass synthesis increased that of biomass consumption, the ¹³C content increased further. At higher rates of OM mineralization, ¹²C accumulated in its remaining part.     

Sedimentation in Boreal Lakes—The Role of Flocculation of Allochthonous Dissolved Organic Matter in the Water Column

We quantified sedimentation of organic carbon in 12 Swedish small boreal lakes (<0.48 km²), which ranged in dissolved organic carbon (DOC) from 4.4 to 21.4 mg C l⁻¹. Stable isotope analysis suggests that most of the settling organic matter is of allochthonous origin. Annual sedimentation of allochthonous matter per m² lake area was correlated to DOC concentration in the water (R ² = 0.41), and the relationship was improved when sedimentation data were normalized to water depth (R ² = 0.58). The net efflux of C as CO₂ from the water to the atmosphere was likewise correlated to DOC concentration (R ² = 0.52). The losses of organic carbon from the water column via mineralization to CO₂ and via sedimentation were approximately of equal importance throughout the year. Our results imply that DOC is a precursor of the settling matter, resulting in an important pathway in the carbon cycle of boreal lakes. Thus, flocculation of DOC of terrestrial origin and subsequent sedimentation could lead to carbon sequestration by burial in lake sediments.     

Ocean carbon sequestration: Particle fragmentation by copepods as a significant unrecognised factor?

Ocean biology helps regulate global climate by fixing atmospheric CO₂ and exporting it to deep waters as sinking detrital particles. New observations demonstrate that particle fragmentation is the principal factor controlling the depth to which these particles penetrate the ocean's interior, and hence how long the constituent carbon is sequestered from the atmosphere. The underlying cause is, however, poorly understood. We speculate that small, particle-associated copepods, which intercept and inadvertently break up sinking particles as they search for attached protistan prey, are the principle agents of fragmentation in the ocean. We explore this idea using a new marine ecosystem model. Results indicate that explicitly representing particle fragmentation by copepods in biogeochemical models offers a step change in our ability to understand the future evolution of biologically-mediated ocean carbon storage. Our findings highlight the need for improved understanding of the distribution, abundance, ecology and physiology of particle-associated copepods.     

Using microbial communities and extracellular enzymes to link soil organic matter characteristics to greenhouse gas production in a tidal freshwater wetland

To gain a more mechanistic understanding of how soil organic matter (OM) characteristics can affect carbon mineralization in tidal freshwater wetlands, we conducted a long-term in situ field manipulation of OM type and monitored associated changes in carbon dioxide (CO₂) and methane (CH₄) production. In addition, we characterized microbial community structure and quantified the activity of several extracellular enzymes (EEA) involved in the acquisition of carbon, nitrogen, and phosphorus. Treatments included a plant litter addition, prepared using naturally-senescing vegetation from the site, and a compost amendment, designed to increase the concentration of aged, partially humified, OM. Both types of OM-amended soils had CO₂ production rates 40–50 % higher than unamended control soils, suggesting that the added OM had inherently higher quality and/or availability than the native soil OM. Rates of CO₂ production were not correlated with microbial community structure or EEA except a modest relationship with cellulose breakdown via the K_m of β-1,4-glucosidase. We interpret this lack of correlation to be a consequence of high functional redundancy of microorganisms that are capable of producing CO₂. Rates of CH₄ production were also influenced by OM quality, increasing by an order of magnitude with plant litter additions relative to compost-amended and control soils. Unlike CO₂, rates of CH₄ production were significantly correlated with the microbial community structure and with enzyme kinetic parameters (V_max and K_m) for both carbon (β-1,4-glucosidase, 1,4-β-cellobiosidase, and β-d-xylosidase) and nitrogen acquisition (leucyl aminopeptidase). The monophyletic nature of methanogenic archaea, combined with their reliance on a small select group of organic substrates produced via enzyme-mediated hydrolysis and subsequent bacterial fermentation, provides a basis for the strong links between microbial community structure, EEA, and CH₄ production. Our results suggest that incorporating microbial community structure and EEA into conceptual models of wetland OM decomposition may enhance our mechanistic understanding of, and predictive capacity for, biogeochemical process rates.     

Enhanced terrestrial carbon uptake in the Northern High Latitudes in the 21st century from the Coupled Carbon Cycle Climate Model Intercomparison Project model projections

The ongoing and projected warming in the northern high latitudes (NHL; poleward of 60 °N) may lead to dramatic changes in the terrestrial carbon cycle. On the one hand, warming and increasing atmospheric CO₂ concentration stimulate vegetation productivity, taking up CO₂. On the other hand, warming accelerates the decomposition of soil organic matter (SOM), releasing carbon into the atmosphere. Here, the NHL terrestrial carbon storage is investigated based on 10 models from the Coupled Carbon Cycle Climate Model Intercomparison Project. Our analysis suggests that the NHL will be a carbon sink of 0.3 ± 0.3 Pg C yr^?1 by 2100. The cumulative land organic carbon storage is modeled to increase by 38 ± 20 Pg C over 1901 levels, of which 17 ± 8 Pg C comes from vegetation (43%) and 21 ± 16 Pg C from the soil (8%). Both CO₂ fertilization and warming enhance vegetation growth in the NHL. Although the intense warming there enhances SOM decomposition, soil organic carbon (SOC) storage continues to increase in the 21st century. This is because higher vegetation productivity leads to more turnover (litterfall) into the soil, a process that has received relatively little attention. However, the projected growth rate of SOC begins to level off after 2060 when SOM decomposition accelerates at high temperature and then catches up with the increasing input from vegetation turnover. Such competing mechanisms may lead to a switch of the NHL SOC pool from a sink to a source after 2100 under more intense warming, but large uncertainty exists due to our incomplete understanding of processes such as the strength of the CO₂ fertilization effect, permafrost, and the role of soil moisture. Unlike the CO₂ fertilization effect that enhances vegetation productivity across the world, global warming increases the productivity at high latitudes but tends to reduce it in the tropics and mid‐latitudes. These effects are further enhanced as a result of positive carbon cycle–climate feedbacks due to additional CO₂ and warming.     

The role of the terrestrial biosphere in Holocene carbon cycle dynamics

Measurements of atmospheric CO₂ concentration, and its stable carbon isotope composition, from gas samples trapped in ice at Taylor Dome, Antarctica, indicate that the global carbon cycle has not been in steady state during the Holocene epoch. Inverse carbon cycle modelling has led to the hypothesized cumulative release from the terrestrial biosphere of 195 Gt C between 7 and 1 kyr before present (bp ). Here, three independent lines of evidence testing this hypothesis are critically examined: global reconstructions of terrestrial carbon reservoirs, vegetation–climate modelling, and high latitude subfossil plant stable carbon isotope records. Despite inherent uncertainties associated with each approach, it emerges that none strongly upholds the suggestion that terrestrial ecosystems released large amounts of carbon between 7 and 1 kyr bp . Consequently, our understanding of the processes involved in the exchange of CO₂ between the atmosphere, oceans and land biota continues to remain incomplete and to require further investigation.     

Implications of CO2 fertilization for future climate change in a coupled climate–carbon model

The terrestrial carbon cycle plays a critical role in determining levels of atmospheric CO₂ that result from anthropogenic carbon emissions. Elevated atmospheric CO₂ is thought to stimulate terrestrial carbon uptake, through the process of CO₂ fertilization of vegetation productivity. This negative carbon cycle feedback results in reduced atmospheric CO₂ growth, and has likely accounted for a substantial portion of the historical terrestrial carbon sink. However, the future strength of CO₂ fertilization in response to continued carbon emissions and atmospheric CO₂ rise is highly uncertain. In this paper, the ramifications of CO₂ fertilization in simulations of future climate change are explored, using an intermediate complexity coupled climate–carbon model. It is shown that the absence of future CO₂ fertilization results in substantially higher future CO₂ levels in the atmosphere, as this removes the dominant contributor to future terrestrial carbon uptake in the model. As a result, climate changes are larger, though the radiative effect of higher CO₂ on surface temperatures in the model is offset by about 30% due to reduced positive dynamic vegetation feedbacks; that is, the removal of CO₂ fertilization results in less vegetation expansion in the model, which would otherwise constitute an important positive surface albedo‐temperature feedback. However, the effect of larger climate changes has other important implications for the carbon cycle – notably to further weaken remaining carbon sinks in the model. As a result, positive climate–carbon cycle feedbacks are larger when CO₂ fertilization is absent. This creates an interesting synergism of terrestrial carbon cycle feedbacks, whereby positive (climate–carbon cycle) feedbacks are amplified when a negative (CO₂ fertilization) feedback is removed.     

Upward increase of kerogen δ13C in the Peru Margin Upper Oligocene: possible implications for the Cenozoic evolution of atmospheric CO2

Carbon isotopic composition of predominantly marine kerogen in latest Oligocene mudstones of the Peru Margin ODP 682A Hole shows an about 3.5‰ increase with decreasing age. Py-GC and elemental (C/N ratio) analysis of the kerogen plus sulphur isotopic study together with earlier knowledge on geological setting and organic geochemistry results in a better understanding of depositionary environment and allows to separation of the influence of concentration of water dissolved carbon dioxide (c_e) on kerogen δ¹³C from that of other factors (bacterial degradation, sea surface temperature, DIC δ¹³C, productivity, and admixture of land plant OM). Based on this analysis, the major part of the kerogen shift is considered as a result of the latest Oligocene decrease of marine photosynthetic carbon isotopic fractionation in the Peru Margin photic zone, which in turn possibly reflects a simultaneous drop in atmospheric CO₂ level. Uncertainties in the evaluation of the factors affecting the marine photosynthetic carbon isotopic fractionation and the extent of ocean–atmosphere disequilibrium do not permit calculation of the decrease of the atmospheric CO₂.     

Terrestrial fluxes of carbon in GCP carbon budgets

The Global Carbon Project (GCP) has published global carbon budgets annually since 2007 (Canadell et al. [2007], Proc Natl Acad Sci USA, 104, 18866–18870; Raupach et al. [2007], Proc Natl Acad Sci USA, 104, 10288–10293). There are many scientists involved, but the terrestrial fluxes that appear in the budgets are not well understood by ecologists and biogeochemists outside of that community. The purpose of this paper is to make the terrestrial fluxes of carbon in those budgets more accessible to a broader community. The GCP budget is composed of annual perturbations from pre‐industrial conditions, driven by addition of carbon to the system from combustion of fossil fuels and by transfers of carbon from land to the atmosphere as a result of land use. The budget includes a term for each of the major fluxes of carbon (fossil fuels, oceans, land) as well as the rate of carbon accumulation in the atmosphere. Land is represented by two terms: one resulting from direct anthropogenic effects (Land Use, Land‐Use Change, and Forestry or land management) and one resulting from indirect anthropogenic (e.g., CO₂, climate change) and natural effects. Each of these two net terrestrial fluxes of carbon, in turn, is composed of opposing gross emissions and removals (e.g., deforestation and forest regrowth). Although the GCP budgets have focused on the two net terrestrial fluxes, they have paid little attention to the gross components, which are important for a number of reasons, including understanding the potential for land management to remove CO₂ from the atmosphere and understanding the processes responsible for the sink for carbon on land. In contrast to the net fluxes of carbon, which are constrained by the global carbon budget, the gross fluxes are largely unconstrained, suggesting that there is more uncertainty than commonly believed about how terrestrial carbon emissions will respond to future fossil fuel emissions and a changing climate.     

Terrestrial ecosystems and the carbon cycle

The terrestrial biosphere plays an important role in the global carbon cycle. In the 1994 Intergovernmental Panel Assessment on Climate Change (IPCC), an effort was made to improve the quantification of terrestrial exchanges and potential feedbacks from climate, changing CO₂, and other factors; this paper presents the key results from that assessment, together with expanded discussion. The carbon cycle is the fluxes of carbon among four main reservoirs: fossil carbon, the atmosphere, the oceans, and the terrestrial biosphere. Emissions of fossil carbon during the 1980s averaged 5.5 Gt y^?1. During the same period, the atmosphere gained 3.2 Gt C y^?1 and the oceans are believed to have absorbed 2.0 Gt C y^?1. The regrowing forests of the Northern Hemisphere may have absorbed 0.5 Gt C y^?1 during this period. Meanwhile, tropical deforestation is thought to have released an average 1.6 Gt C y^?1 over the 1980s. While the fluxes among the four pools should balance, the average 198Ds values lead to a ‘missing sink’ of 1.4 Gt C y^?1 Several processes, including forest regrowth, CO₂ fertilization of plant growth (c. 1.0 Gt C y^?1), N deposition (c. 0.6 Gt C y^?1), and their interactions, may account for the budget imbalance. However, it remains difficult to quantify the influences of these separate but interactive processes. Uncertainties in the individual numbers are large, and are themselves poorly quantified. This paper presents detail beyond the IPCC assessment on procedures used to approximate the flux uncertainties. Lack of knowledge about positive and negative feedbacks from the biosphere is a major limiting factor to credible simulations of future atmospheric CO₂ concentrations. Analyses of the atmospheric gradients of CO₂ and ¹³ CO₂ concentrations provide increasingly strong evidence for terrestrial sinks, potentially distributed between Northern Hemisphere and tropical regions, but conclusive detection in direct biomass and soil measurements remains elusive. Current regional-to-global terrestrial ecosystem models with coupled carbon and nitrogen cycles represent the effects of CO₂ fertilization differently, but all suggest longterm responses to CO₂ that are substantially smaller than potential leaf- or laboratory whole plant-level responses. Analyses of emissions and biogeochemical fluxes consistent with eventual stabilization of atmospheric CO₂ concentrations are sensitive to the way in which biospheric feedbacks are modeled by c. 15%. Decisions about land use can have effects of 100s of Gt C over the next few centuries, with similarly significant effects on the atmosphere. Critical areas for future research are continued measurements and analyses of atmospheric data (CO₂ and ¹³CO₂) to serve as large-scale constraints, process studies of the scaling from the photosynthetic response to CO₂ to whole-ecosystem carbon storage, and rigorous quantification of the effects of changing land use on carbon storage.     

Evaluation of ecosystem dynamics, plant geography and terrestrial carbon cycling in the LPJ dynamic global vegetation model

The Lund–Potsdam–Jena Dynamic Global Vegetation Model (LPJ) combines process‐based, large‐scale representations of terrestrial vegetation dynamics and land‐atmosphere carbon and water exchanges in a modular framework. Features include feedback through canopy conductance between photosynthesis and transpiration and interactive coupling between these ‘fast’ processes and other ecosystem processes including resource competition, tissue turnover, population dynamics, soil organic matter and litter dynamics and fire disturbance. Ten plants functional types (PFTs) are differentiated by physiological, morphological, phenological, bioclimatic and fire‐response attributes. Resource competition and differential responses to fire between PFTs influence their relative fractional cover from year to year. Photosynthesis, evapotranspiration and soil water dynamics are modelled on a daily time step, while vegetation structure and PFT population densities are updated annually. Simulations have been made over the industrial period both for specific sites where field measurements were available for model evaluation, and globally on a 0.5°° × 0.5°° grid. Modelled vegetation patterns are consistent with observations, including remotely sensed vegetation structure and phenology. Seasonal cycles of net ecosystem exchange and soil moisture compare well with local measurements. Global carbon exchange fields used as input to an atmospheric tracer transport model (TM2) provided a good fit to observed seasonal cycles of CO₂ concentration at all latitudes. Simulated inter‐annual variability of the global terrestrial carbon balance is in phase with and comparable in amplitude to observed variability in the growth rate of atmospheric CO₂. Global terrestrial carbon and water cycle parameters (pool sizes and fluxes) lie within their accepted ranges. The model is being used to study past, present and future terrestrial ecosystem dynamics, biochemical and biophysical interactions between ecosystems and the atmosphere, and as a component of coupled Earth system models.