Concentrations of CO2 and O2 in floodwater and in internodal lacunae of floating rice growing at 1–2 metre water depths

Abstract. Environment and plant measurements were made to determine what factors may limit growth of deepwater and floating rice plants during partial or complete submergence. Field surveys included measurements of temperature, pH, light, O₂ and CO₂ in floodwater in Thailand. In addition, measurements were made of O₂ and CO₂ concentrations inside internodal lacunae of deepwater and floating rice growing at 0.5–2.0 m water depths. The bulk of measurements were taken during periods when the changes in water level were less than 50 mm d^?1. In the 0–0.02 m surface layer of floodwater at any location there were large changes in oxygen concentrations over diurnal cycles: there were decreases during the night down to 0.02–0.18 mol m^?3 O₂ at 0600 h and increases during the day to 0.13–0.28 mol m^?3 O₂ at 1500 h (0.28 mol m^?3 being 120% of the O₂ concentration of air saturated water at 30°C). During the day oxygen concentrations decreased with increasing water depth; concentrations just above the soil surface were occasionally zero. Most of this gradient disappeared during the night, and at dawn the 0.6 m surface layer of water had uniform low O₂ concentrations. O₂ concentrations were also measured during flash floods in Thailand. In contrast to the conditions with only small increases in water level, the O₂ concentrations in the water during flash floods were more uniform with depth and changed little over a diurnal cycle, the O₂ ranging between 0.14–0.19 mol m^?3. In most locations floodwater contained 0.2–1.9 mol m^?3 CO₂ and 0.7–1.6 mol m^?3 bicarbonate; however, in a location with acid sulphate soil CO₂ was only 0.05–0.2 mol m^?3, and bicarbonate concentrations were several fold lower. Concentrations of CO₂ in floodwater increased with increasing water depth. O₂ and CO₂ concentrations inside internodal lacunae of rice were determined in the field when water depth were 1–2 m. Concentrations of O₂ in internodes at the water surface were 16–20%, and decreased to 10% and 5% at 0.8 and 1.8 m water depth respectively. There was no diurnal cycle in O₂ concentrations inside internodes. In contrast, CO₂ concentrations in the lacunae increased with water depth and ranged from 1–3% in internodes at the water surface to 5–10% in internodes at 1.8 m water depth. There was evidence for a diurnal cycle in CO₂ concentrations in the basal internode near the soil surface, CO₂ increased during the day and decreased during the night. The above data are used to show that there is little or no relationship between gas concentrations in floodwater and internodal lacunae of rice plants. Results are discussed in relation to O₂ supply to submerged portions of rice and metabolism of these tissues at low O₂ concentrations.     

Oxygen Microelectrode That Is Insensitive to Medium Chemical Composition: Use in an Acid Microbial Mat Dominated by Cyanidium caldarium

A novel oxygen microelectrode with a tip diameter of 2 to 20 μm was constructed which could function satisfactorily under a variety of environmental conditions and in a variety of media, including human blood serum, citric acid at pH 2.5, moist air, and paraffin oil. Measurement of oxygen by this electrode does not require stirring of the medium. Electrodes could be made so that the 90% response time necessary to detect changes in oxygen concentration was less than 0.2 s, and response was linear with oxygen concentration. To demonstrate the performance of the electrode, oxygen and photosynthesis profiles of an acid microbial mat (pH 2.8) dominated by the eucaryotic alga Cyanidium caldarium were made. Photosynthetic rates as high as 95 mmol of O₂ dm⁻³ h⁻¹ were measured within the most active 0.1-mm layer, which was ca. 0.2 mm below the surface of the microbial mat. The total photosynthetic activity was 47 mmol of O₂ m⁻² h⁻¹. Vertical profiles of photosynthesis at different light intensities showed that the microalgae within the mat were not photoinhibited at bright sunlight (2,090 μEinsteins m⁻² s⁻¹).     

Photoexcretion and Fate of Glycolate in a Hot Spring Cyanobacterial Mat

Photosynthesis by Synechococcus lividus, the sole oxygenic phototroph inhabiting the surface of the 55°C cyanobacterial mat in Mushroom Spring, Yellowstone National Park, causes superoxic and alkaline conditions which promote glycolate photoexcretion. At O₂ concentrations characteristic of the top 2 mm of mat during the day, up to 11.8% of NaH¹⁴CO₃ fixed in the light was excreted, and glycolate accounted for up to 58% of the excreted photosynthate. Glycolate was neither incorporated nor metabolized by S. lividus, but it was incorporated by filamentous microorganisms in the mat. Incubation of mat samples with NaH¹⁴CO₃ resulted in labeling of both S. lividus and filaments, but the addition of nonradioactive glycolate increased the level of ¹⁴C in the aqueous phase and decreased the extent of labeling of filaments. This suggests that cross-feeding of glycolate from S. lividus to filamentous heterotrophs occurs and that underestimation of the extent of photoexcretion is probable.     

Spatio-temporal patterns of grassland evapotranspiration and water use efficiency in arid areas

Understanding spatio-temporal patterns of grassland evapotranspiration (ET) and water use efficiency (WUE) in arid areas is important for livestock production and ecological conservation. Xinjiang, China, was used as an example in the Biome-BGC model to explore spatio-temporal patterns of grassland ET and WUE from 1979 to 2012 in arid areas. The ET ranked from high to low as follows: among seasons, summer (142.4 mm), spring (49.7 mm), autumn (45.9 mm) and winter (7.7 mm); among regions, the Tianshan Mountains (357.9 mm), northern Xinjiang (221.3 mm) and southern Xinjiang (183.2 mm); among grassland types, mid-mountain meadow (387.7 mm), swamp meadow (358.3 mm), typical grassland (343.9 mm), desert grassland (236.2 mm), alpine meadow (229.7 mm), and saline meadow (154.7 mm). The WUE ranked from high to low as follows: among seasons, summer (0.60 g C kg H₂O^?1), autumn (0.48 g C kg H₂O^?1) and spring (0.43 g C kg H₂O^?1); among regions, northern Xinjiang (0.73 g C kg H₂O^?1), the Tianshan Mountains (0.69 g C kg H₂O^?1) and southern Xinjiang (0.26 g C kg H₂O^?1); among grassland types, mid-mountain meadow (0.86 g C kg H₂O^?1), typical grassland (0.84 g C kg H₂O^?1), swamp meadow (0.77 g C kg H₂O^?1), saline meadow (0.52 g C kg H₂O^?1), alpine grassland (0.37 g C kg H₂O^?1) and desert grassland (0.34 g C kg H₂O^?1). In Xinjiang grasslands, the spatio-temporal ET patterns were more strongly influenced by precipitation than by temperature, whereas most high WUE values occurred when precipitation and temperature were relatively conducive to grass growth.     

PerR-Regulated Manganese Ion Uptake Contributes to Oxidative Stress Defense in an Oral Streptococcus

Metal homeostasis plays a critical role in antioxidative stress. Streptococcus oligofermentans, an oral commensal facultative anaerobe lacking catalase activity, produces and tolerates abundant H₂O₂, whereas Dpr (an Fe²⁺-chelating protein)-dependent H₂O₂ protection does not confer such high tolerance. Here, we report that inactivation of perR, a peroxide-responsive repressor that regulates zinc and iron homeostasis in Gram-positive bacteria, increased the survival of H₂O₂-pulsed S. oligofermentans 32-fold and elevated cellular manganese 4.5-fold. perR complementation recovered the wild-type phenotype. When grown in 0.1 to 0.25 mM MnCl₂, S. oligofermentans increased survival after H₂O₂ stress 2.5- to 23-fold, and even greater survival was found for the perR mutant, indicating that PerR is involved in Mn²⁺-mediated H₂O₂ resistance in S. oligofermentans. Mutation of mntA could not be obtained in brain heart infusion (BHI) broth (containing ∼0.4 μM Mn²⁺) unless it was supplemented with ≥2.5 μM MnCl₂ and caused 82 to 95% reduction of the cellular Mn²⁺ level, while mntABC overexpression increased cellular Mn²⁺ 2.1- to 4.5-fold. Thus, MntABC was identified as a high-affinity Mn²⁺ transporter in S. oligofermentans. mntA mutation reduced the survival of H₂O₂-pulsed S. oligofermentans 5.7-fold, while mntABC overexpression enhanced H₂O₂-challenged survival 12-fold, indicating that MntABC-mediated Mn²⁺ uptake is pivotal to antioxidative stress in S. oligofermentans. perR mutation or H₂O₂ pulsing upregulated mntABC, while H₂O₂-induced upregulation diminished in the perR mutant. This suggests that perR represses mntABC expression but H₂O₂ can release the suppression. In conclusion, this work demonstrates that PerR regulates manganese homeostasis in S. oligofermentans, which is critical to H₂O₂ stress defenses and may be distributed across all oral streptococci lacking catalase.     

Seasonal distribution of nitrifying bacteria and rates of nitrification in coastal marine sediments

The distribution of nitrification potential (NP) with depth in sediment and season was investigated in a shallow sandy sediment (0.5 m water) and a deeper muddy sediment (17m water). In both sediments, nitrifying bacteria were present in the anoxic strata (oxygen penetration was 5 mm below the surface). The NP at 6–8 cm depth in the sediment was 50% and 10% of the surface NP at the sandy and muddy sediment, respectively. It is suggested that bioturbation and physical disturbance of the sediment were the most likely reasons for this distribution. The NP increased as sediment temperature decreased. This effect was less marked in the muddy sediment. It is concluded that during the summer, the numbers or specific activity of nitrifying bacteria diminished for the following reasons: There was decreased O₂ penetration into the sediment and increased competition for O₂ by heterotrophs; there was increased competition for NH₄ ⁺ and there was inhibition by H₂S. These effects counteracted the potentially higher growth rates and increased rates of NH₄ ⁺ production at the elevated summer temperatures. The potential nitrification rates in the upper 1 cm, which were measured at 22°C, were converted to calculated rates at the in situ temperature (Q₁₀=2.5) and in situ oxygen penetration. These calculated rates were shown to closely resemble the measured in situ rates of nitrification. The relationship between the in situ rates of nitrification and the nitrification potential is discussed.     

Oxidative Stress Alters Physiological and Morphological Neuronal Properties

We investigated the effects of H₂O₂-induced oxidative stress on the delayed-rectifier current (IK_DR), neuronal physiological and morphological properties. Measurements were obtained from hippocampal CA1 neurons in control solution and from the same neurons after exposure to oxidative stress (short- and long-term H₂O₂ external applications at 0.1, 1, and 10 mM). With short-term (6 min) H₂O₂ (1 mM) treatment, IK_DR measured in the H₂O₂-containing solution (778 ± 23 pA, n = 20), was smaller than that measured in the control Ca²⁺-free Hepes solution (1,112 ± 38 pA, n = 20). Coenzyme Q₁₀ (0.1 mM) pretreatment prevented the H₂O₂-induced inhibition of IK_DR. With long-term (40, 80 min) H₂O₂ (0.1, 10 mM) treatment, the neuron lost its distinctive shape (rounded up) and the neurite almost disappeared. These results suggest that oxidative stress, which inhibits IK_DR, can alter neural activity. The morphological changes caused by H₂O₂ support the idea that oxidative stress causes intracellular damage and compromises neural function.     

Diurnal Oscillations in Gas Production (O2, CO2, CH4, and N2) in Soil Monoliths

Soil cores (35 cm long, 7 cm diameter) from the Macaulay Land Use Research Institute's Sourhope Research Station in the Scottish Borders were kept and monitored at constant temperature (18± 1°C) for gas production using a 1.6 mm diameter stainless steel probe fitted with a membrane inlet and connected to a quadrupole mass spectrometer. This provided a novel method for on-line, real time monitoring of soil gas dynamics. In closed-system headspace experiments, O₂ and CO₂ (measured at m/z values 32 and 44, respectively) showed anti-phase diurnal fluctuations in low-intensity simulated daylight and under a light-dark (LD, 12:12 h) regime. O₂ increased during periods of illumination and decreased in the dark. The inverse was true for CO₂ production. Ar (m/z = 40) concentration and temperature (°C) remained constant throughout the experiments. The same phase-related oscillations, in CO₂ and O₂ concentrations, were observed at 2 and 5 cm depth in soil cores. The O₂ concentration did not oscillate diurnally at 10 cm depth. In below-ground experiments, CH₄ (m/z = 15) concentration showed diurnal cycles at 2, 5 and 10 cm depth. The CH₄ production had the same diurnal phase cycle as CO₂ but with lower amplitude. Evidence of below-ground diurnal oscillations in N₂ (m/z = 28) concentration was provided at 5 cm depth. The scale of production and consumption of gases associated with soil-atmosphere interactions and below-ground processes, are shown to be a multifaceted output of several variables. These include light, circadian-controlled physiological rhythms of plants and microbes, and the interactions between these organisms.     

PHOTOSYNTHESIS-IRRADIANCE PATTERNS IN BENTHIC MICROALGAE: VARIATIONS AS A FUNCTION OF ASSEMBLAGE THICKNESS AND COMMUNITY STRUCTURE

Photosynthesis-irradiance (P-I) characteristics of periphyton (microphytobenthos) have been considered primarily for entire assemblages. How P-I responses vary with mat thickness and with community composition has not been considered in detail. We used a combined approach of modeling, microscale determinations of photosynthetic rate and light attenuation, and whole-assemblage O₂ flux measurements to explore P-I relationships. The modeling approach suggested that the onset of photosynthetic saturation and photoinhibition will occur at higher irradiance and that whole-mat photoinhibition (decreased photosynthesis at very high irradiance), biomass-specific maximum photosynthetic rate, and initial slope of the P-I function (α) should decrease as assemblage thickness increases or light attenuation increases. Spherical light microsensor profiles for a variety of stream algae indicated a strongly compressed photic zone with attenuation coefficients of 70–1791 m^?1 for scalar photosynthetic photon fluence density. The O₂ microelectrode measurements showed little if any photoinhibition at 2 and 4 mm depths in one filamentous green algal (Ulothrix) assemblage, with a relatively low attenuation coefficient, and no photoinhibition in a second Ulothrix community. An assemblage dominated by a unicellular cyanobacterium exhibited little photoinhibition at 2 and 4 mm, and a dense cyanobacterial (Phormidium)/xanthophyte (Vaucheria) community exhibited no photoinhibition at all. The microelectrode data revealed increases in α over several millimeters of depth (photoacclimation). These data supported the model predictions with regard to the effects of mat optical thickness on whole-assemblage values for α and photoinhibition. Whole-community O₂ flux data from 15 intact assemblages revealed positive relationships between chlorophyll a density and maximum photosynthetic rate or α expressed per unit area; the relationships with chlorophyll a were negative when photosynthetic rates were expressed per unit chlorophyll a. None of the whole assemblages exhibited photoinhibition. Thus, the data from the whole communities were consistent with model predictions.     

The novel non-heme vanadium bromoperoxidase from marine algae: Phosphate inactivation

Summary Vanadium bromoperoxidase is a naturally occurring vanadium-containing enzyme isolated from marine algae. V-BrPO catalyzes the oxidation of halides by hydrogen peroxide which can result in the halogenation of organic substrates. Bromoperoxidase activity is measured by the halogenation of monochlorodimedone (2-chloro-5,5-dimethyl-1,3-dimedone, MCD). In the absence of an organic substrate, V-BrPO catalyzes the halide-assisted disproportionation of hydrogen peroxide yielding dioxygen. The dioxygen formed is in the singlet excited state (¹O₂). V-BrPO is quite stable to thermal denaturation and denaturation by certain organic solvents which makes V-BrPO an excellent candidate for industrial applications. The stability of V-BrPO in the presence of strong oxidants and in the presence of phosphate is reported. Incubation of V-BrPO in phosphate buffer (1–100 mM at pH 6; 2–10 mM at pH 5) inactivates the enzyme. The inactivity can be fully restored by the addition of vanadate if excess phosphate is removed. The inactivation of V-BrPO by phosphate can be prevented by the presence of H₂O₂ (4–40 mM). We are currently investigating the mechanism of V-BrPO inactivation by phosphate. V-BrPO was not inactivated by HOCl (1 mM) nor H₂O₂. In addition V-BrPO was not inactivated under turnover conditions of 1 mM H₂O₂ with 0.1–1 M Cl^– at pH 5 nor 2 mM H₂O₂ with 0.1 M Br^–.     

Transition from Anoxygenic to Oxygenic Photosynthesis in a Microcoleus chthonoplastes Cyanobacterial Mat

Benthic cyanobacterial mats with the filamentous Microcoleus chthonoplastes as the dominant phototroph grow in oxic hypersaline environments such as Solar Lake, Sinai. The cyanobacteria are in situ exposed to chemical variations between 200 μmol of sulfide liter⁻¹ at night and 1 atm pO₂ during the day. During experimental H₂S to O₂ transitions the microbial community was shown to shift from anoxygenic photosynthesis, with H₂S as the electron donor, to oxygenic photosynthesis. Microcoleus filaments could carry out both types of photosynthesis concurrently. Anoxygenic photosynthesis dominated at high sulfide levels, 500 μmol liter⁻¹, while the oxygenic reaction became dominant when the sulfide level was reduced below 100 to 300 μmol liter⁻¹ (25 to 75 μmol of H₂S liter⁻¹). An increasing inhibition of the oxygenic photosynthesis was observed upon transition to oxic conditions from increasing sulfide concentrations. Oxygen built up within the Microcoleus layer of the mat even under 5 mmol of sulfide liter⁻¹ (500 μmol of H₂S liter⁻¹) in the overlying water. The implications of such a localized O₂ production in a highly reducing environment are discussed in relation to the evolution of oxygenic photosynthesis during the Proterozoic era.     

Stability of crude ligninases: Effect of different hydrogen peroxide concentrations in the presence of aromatic alcohols

Summary In absence of veratryl alcohol (VA),Phanerochaete chrysosporium ligninases were extensively inactivated by H₂O₂ concentrations as low as 5.0 μM (1 hr exposure time, pH 4.5, 38°C). In the presence of 2.5 mM VA (but not 2.5 mM benzyl alcohol), protection occurred below 500 μM H₂O₂.     

Light-dependent reduction of hydrogen peroxide by intact spinach chloroplasts

Intact spinach chloroplasts, washed four times in buffered sorbitol to decrease catalase contamination, supported O₂ evolution in the dark at very low rates (less than 2 μmol/mg Chl per h) in the presence of low concentrations of H₂O₂ (0.25 mM); H₂O₂ was not significantly metabolished under these conditions. In the light, washed chloroplasts supported H₂O₂-dependent O₂ evolution at rates of 28–46 μmol/mg Chl per h in the presence of 0.1–0.25 mM H₂O₂; the concentration of H₂O₂ supporting 0.5V_max was estimated to be 25 μM. O₂ evolution in the light was associated with H₂O₂ consumption and ceased after the production of 0.45 mol per mol H₂O₂ consumed. Both O₂ evolution and H₂O₂ consumption were abolished by 5 μM 3-(3,4-dichlorophenyl)-1,1-dimethylurea. Washed intact chloroplasts contained endogenous pools of GSH and ascorbate estimated at 10 and 33 mM, respectively. H₂O₂-dependent O₂ evolution in the light was associated with a decrease in these levels which increased as O₂ evolution gradually ceased. The results are consistent with the hypothesis that H₂O serves as eventual electron donor for the reduction of H₂O₂ in illuminated chloroplasts and that GSH/GSSG and ascorbate/dehydroascorbate serve as intermediate electron carriers. Preincubation of chloroplasts in the dark with 0.1 mM H₂O₂ abolished O₂ evolution in the light.     

Competitive inhibition of hydrogen peroxide-induced aggregation of calf platelets by prostaglandin H2/thromboxane A2 receptor ligands

Hydrogen peroxide (H₂O₂)-induced aggregation of calf platelets and its modification by agents with specific properties were characterized employing a spectrophotometric assay. An Arrhenius activation energy of 20 ± 1 kcal/mol was found in the temperature range of 25‡-36‡C. Rate inhibition occurred on either side of this temperature range, and under anaerobic conditions. Exogenous Ca²⁺ ions were not required but Ca²⁺ ions, at 1 mM-concentration, optimally increased rates and extent of aggregation at suboptimal H₂O₂ concentrations but only extent of aggregation at optimal H₂O₂ concentrations. Ba²⁺, Sr²⁺, Cd²⁺, Mn²⁺ and Ni²⁺ ions (1 mM) and Zn²⁺, Pb²⁺ and Hg²⁺ ions (10 mM) were inhibitory. The cyclo-oxygenase inhibitor, indomethacin (10-30 mM) exerted only mild inhibition by a competitive mechanism. Another cyclo-oxygenase inhibitor, aspirin, functioned to increase aggregation. Ligands acting directly at the prostaglandin H₂/thromboxane A, receptor (5Z. 9, 11, 13E, 15(S) 15-hydroxy 9(11) epoxy methano prosta 5, 13-dien-1-oic acid, pinane thromboxane A₂, arachidonic acid, eicosapentaenoic acid, and N-ethylmaleimide) functioned as competitive inhibitors. Another platelet-activating sulphydryl reagent, thimerosal, also inhibited competitively while the protein kinase C inhibitor, sphingosine, and the protein kinase C modulator, Zn²⁺ ions, inhibited by different mechanisms. The results indicate direct action of H₂O₂ at the prostaglandin H₂/thromboxane A₂ receptor, possibly its sulphydryls, to activate the protein kinase C pathway, independently of cyclo-oxygenase products. The results underscored the power of the kinetic approach for investigating mechanisms of platelet activation.     

Sulfate-Reducing Bacteria and Their Activities in Cyanobacterial Mats of Solar Lake (Sinai, Egypt)

The sulfate-reducing bacteria within the surface layer of the hypersaline cyanobacterial mat of Solar Lake (Sinai, Egypt) were investigated with combined microbiological, molecular, and biogeochemical approaches. The diurnally oxic surface layer contained between 10⁶ and 10⁷ cultivable sulfate-reducing bacteria ml⁻¹ and showed sulfate reduction rates between 1,000 and 2,200 nmol ml⁻¹ day⁻¹, both in the same range as and sometimes higher than those in anaerobic deeper mat layers. In the oxic surface layer and in the mat layers below, filamentous sulfate-reducing Desulfonema bacteria were found in variable densities of 10⁴ to 10⁶ cells ml⁻¹. A Desulfonema-related, diurnally migrating bacterium was detected with PCR and denaturing gradient gel electrophoresis within and below the oxic surface layer. Facultative aerobic respiration, filamentous morphology, motility, diurnal migration, and aggregate formation were the most conspicuous adaptations of Solar Lake sulfate-reducing bacteria to the mat matrix and to diurnal oxygen stress. A comparison of sulfate reduction rates within the mat and previously published photosynthesis rates showed that CO₂ from sulfate reduction in the upper 5 mm accounted for 7 to 8% of the total photosynthetic CO₂ demand of the mat.     

Diurnal changes in the xanthophyll cycle pigments of freshwater algae correlate with the environmental hydrogen peroxide concentration rather than non-photochemical quenching

Background and Aims In photosynthetic organisms exposure to high light induces the production of reactive oxygen species (ROS), such as hydrogen peroxide (H₂O₂), which in part is prevented by non-photochemical quenching (NPQ). As one of the most stable and longest-lived ROS, H₂O₂ is involved in key signalling pathways in development and stress responses, although in excess it can induce damage. A ubiquitous response to high light is the induction of the xanthophyll cycle, but its role in algae is unclear as it is not always associated with NPQ induction. The aim of this study was to reveal how diurnal changes in the level of H₂O₂ are regulated in a freshwater algal community.Methods A natural freshwater community of algae in a temporary rainwater pool was studied, comprising photosynthetic Euglena species, benthic Navicula diatoms, Chlamydomonas and Chlorella species. Diurnal measurements were made of photosynthetic performance, concentrations of photosynthetic pigments and H₂O₂. The frequently studied model organisms Chlamydomonas and Chlorella species were isolated to study photosynthesis-related H₂O₂ responses to high light.Key Results NPQ was shown to prevent H₂O₂ release in Chlamydomonas and Chlorella species under high light; in addition, dissolved organic carbon excited by UV-B radiation was probably responsible for a part of the H₂O₂ produced in the water column. Concentrations of H₂O₂ peaked at 2 µm at midday and algae rapidly scavenged H₂O₂ rather than releasing it. A vertical H₂O₂ gradient was observed that was lowest next to diatom-rich benthic algal mats. The diurnal changes in photosynthetic pigments included the violaxanthin and diadinoxanthin cycles; the former was induced prior to the latter, but neither was strictly correlated with NPQ.Conclusions The diurnal cycling of H₂O₂ was apparently modulated by the organisms in this freshwater algal community. Although the community showed flexibility in its levels of NPQ, the diurnal changes in xanthophylls correlated with H₂O₂ concentrations. Alternative NPQ mechanisms in algae involving proteins of the light-harvesting complex type and antioxidant protection of the thylakoid membrane by de-epoxidized carotenoids are discussed.     

Newly synthesized Fe-doped CDs for colorimetric and fluorometric nanozyme-based levodopa sensing

A simple single-pot hydrothermal method was used to fabricate a Fe, N, and S co-doped carbon dots (Fe-CDs) nanozyme using ferric chloride and sunset yellow as precursors. The fabricated Fe-CDs exhibited intense green fluorescence at 460 nm with excitation-independent properties and a high quantum yield of 40.23%. This nanozyme mimics peroxidase by catalyzing the oxidation of tetramethylbenzidine (TMB) by H₂O₂ to yield a blue-coloured TMB_ox product at 652 nm. Dual detection methods were established for determining levodopa (l -dopa) by taking advantage of the high nanozyme activity and the distinct fluorescence aspect. Both determination methods are based on the oxidation of l -dopa by H₂O₂ in the presence of Fe-CDs and fading of the blue colour of the TMB_ox. The colorimetric method monitors the amount of colour fading of TMB_ox. In the fluorometric method, the formed blue TMB_ox absorbs the emission light of the Fe-CDs; when l -dopa is present, this effect decreases and the intensity of the emission light increases. The nanozyme-based detection procedures exhibit good linearity in the ranges 2.17 × 10⁻³ to 34.78 × 10⁻³ mM [limit of detection (LOD) = 0.84 × 10⁻³ mM] and 0.85 × 10³ to 16.95 × 10³ nM (LOD = 0.102 × 10³ nM) for colorimetric and fluorometric methods, respectively.     

Lethality of hydrogen peroxide in wild type and superoxide dismutase mutants of Escherichia coli. (A hypothesis on the mechanism of H2O2-induced inactivation of Escherichia coli)

The toxicity of H₂O₂ in Escherichia coli wild type and superoxide dismutase mutants was investigated under different experimental conditions. Cells were either grown aerobically, and then treated in M9 salts or K medium, or grown anoxically, and then treated in K medium. Results have demonstrated that the wild type and superoxide dismutase mutants display a markedly different sensitivity to both modes of lethality produced by H₂O₂ (i.e. mode one killing, which is produced by concentrations of H₂O₂ lower than 5 mM, and mode two killing which results from the insult generated by concentrations of H₂O₂ higher than 10 mM). Although the data obtained do not clarify the molecular basis of H₂O₂ toxicity and/or do not explain the specific function of superoxide ions in H₂O₂-induced bacterial inactivation, they certainly demonstrate that the latter species plays a key role in both modes of H₂O₂ lethality. A mechanism of H₂O₂ toxicity in E. coli is proposed, involving the action of a hypothetical enzyme which should work as an O₂^-• generating system. This enzyme should be active at low concentrations of H₂O₂ (<5 mM) and high concentrations of the oxidant (>5 mM) should inactivate the same enzyme. Superoxide ions would then be produced and result in mode one lethality. The resistance at intermediate H₂O₂ concentrations may be dependent on the inactivation of such enzyme with no superoxide ions being produced at levels of H₂O₂ in the range 5–10 mM. Mode two killing could be produced by the hydroxyl radical in concert with superoxide ions, chemically produced via the reaction of high concentrations of H₂O₂ (>10 mM) with hydroxyl radicals. The rate of hydroxyl radical production may be increased by the higher availability of Fe²⁺ since superoxide ions may also reduce trivalent iron to the divalent form.     

Purification and properties of a highly active catalase from cabbage loopers,Trichoplusia ni

Using ethanol-chloroform fractionation in conjunction with standard column chromatography techniques catalase has been purified to electrophoretic homogeneity from mid-fifth instar larvae of the cabbage looper moth, Trichoplusia ni. The specific activity of purified catalase was 2.2 × 10⁵ units (IU = 1 μmol H₂O₂ decomposed mg protein⁻¹ min⁻¹). The purified enzyme's native molecular weight was in the 247,000–259,000 Da range and was tetrameric with an apparent molecular weight of 63,000 Da for each subunit. In addition, biochemical properties of the enzyme were studied with emphasis on substrate specificity, kinetics, and the mechanism of inactivation by the irreversible inhibitor 3-amino-1,2,4-triazole (AT). The apparent K_m of the purified catalase for H₂O₂ was 54.2 mM and 50% of the maximal rate occurred at 16 mM H₂O₂. Purified catalase was ineffective in metabolizing organic hydroperoxides and, unlike other catalases, lacked peroxidase activity. Lastly, AT in the presence and absence of H₂O₂ was an effective inhibitor of catalase activity (I₅₀ = 100 mM) suggesting that a portion of the purified catalase was complexed with hydrogen peroxide in a compound 1 configuration.