Revisione delle specie: Actinomyces albus,A. chromogenus,A. odorifer,A. thermophylus,A. viridis,A. viridochromogenes,A. hominis,A. innominatus

Riassunto Lo studio comprende una revisione critico-sperimentale della specie Actinomyces albus, della quale vengono considerati come sinonimi circa 30 nomi speeifici, fra i quale A. chromogenus, A. odorifer, A. thermophylus p.p.; della specie é data una diagnosi ed una particolareggiata descrizione.Sono inoltre studiate le specie A. viridis, (= A. viridochromogenus) e A. innominatus, n. nomen. Quest'ultima é preceduta da una breve discussione sulla specie A. homini.

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Summary Twenty-six strains of Actinomyces albus are studied redescribed from morphological, cultural and biochemical standpoints. Many biological activities of A. chromogenus, A. odorifer and A. thermophilus are in common with other species of the same genus, so that they may be considered for sub-specific, (not specific) differentiation. A discussion on A. farcinicus, A. albidoflavus and A. aureus has been originated from mislabeling as A. albus; the group including the two last named species (flavus group) must be revised. A few strains classified A. farcinicus are in no doubt true A. albus, but this real specific entity remains to be revised from Nocard's strain. A. viridis, for the first time described by Lombardo-Pellegrino, has been redescribed three times as a new species under the same binomial, and the fourth as A. viridochromogenes. A. hominis Bostroem is an uncorrect determination for the species originally described by Waksmann and Curtiss, and it is renamed A. innominatus, the binomial A. (Streptothrix) hominis Auct. being a nomen ambiguum. In conclusion, 30 bionmial are appended in sinonimy to A. albus, including Cladothrix dichotoma Macé (1888) non Cohn, G. invulnerabilis Acosta et G. Rossi, C. odorifera Rullm. Actinomyces chromogenus Gasp., A. thermophilus Auct., p.p., A. (Streptothrix) Sanninii (Cif.) Westerd., A. Almquisti Duché, A. Gougeroti Duché, and so on.

     

Patterns of intraspecific variation inAntennaria alborosea,A. corymbosa,A. marginata,A. microphylla,A. parvifolia,andA. umbrinella (Asteraceae:Inuleae)

Patterns of intraspecific variation were examined inAntennaria alborosea A. E. Porsild,A. corymbosa E. Nels,A. marginata Greene,A. microphylla Rydb.,A. parvifolia Nutt., andA. umbrinella Rydb. AlthoughA. alborosea was initially considered arctic in distribution, it became apparent that a southern montane element also exists. Our results suggest that morphological differences between arctic and southern montane specimens represent clinal variation. The additional morphological data for specimens that occur more than 1,500 km south of the species' range as it was initially described result in a better understanding of this once presumed arctic taxon. Morphological variation in the dioecious speciesA. corymbosa, A. marginata, A. microphylla, A. parvifolia, andA. umbrinella was greater between the genders than was geographic variation within each gender. These results demonstrate that both pistillate and staminate specimens must be examined in dioecious species ofAntennaria if morphological variation in the respective species is to be fully understood. Character size or number of broadly distributed species (A. microphylla andA. parvifolia) generally decreased with increasing longitude, whereas characters of species with more restricted distributions (A. alborosea, A. corymbosa, andA. marginata) generally increased in size or number with increasing latitude or longitude.Antennaria umbrinella was an exception in this respect.     

The genusAntennaria (Asteraceae: Inuleae) in western North America: Morphometric analysis ofAntennaria alborosea,A. corymbosa,A. marginata,A. microphylla,A. parvifolia,A. rosea,andA. umbrinella

Multivariate analysis of vegetative and reproductive characters was used to examine morphological relatedness amongAntennaria alborosea A. E. Porsild,A. corymbosa E. Nels.,A. marginata Greene,A. microphylla Rydb.,A. parvifolia Nutt.,A. rosea Greene, andA. umbrinella Rydb. Both pistillate and staminate plants were examined. Some of the characters examined were variable in one species, but stable in another (i.e., presence or absence of papillae on the achenes). Our analyses indicate that the seven species are morphologically distinct. It is hypothesized that theA. rosea agamic complex arose through hybridization amongA. corymbosa, A. microphylla, A. umbrinella, and possiblyA. dioica (L.)Gaertn. However, hybridization between the three former species and others, as well as their subsequent morphological responses to different environmental conditions causes confusion in recognizing the taxa.Antennaria angustifolia Rydb.,A. arida E. Nels.,A. confinis Greene,A. scariosa E. Nels.,A. foliacea humilis Rydb.,A. concinna E. Nels., andA. viscidula E. Nels. are considered to represent F 1 hybrids.     

Aspidistra albopurpurea,A. khangii,A. lubae and A. stellata spp. nov. (Asparagaceae,Convallariaceae s.s.) from Indochina

Aspidistra albopurpurea, A. khangii, A. lubae and A. stellata discovered recently are described and illustrated as species new to science. All novelties are local endemics of northern Vietnam and southeastern Laos. Aspidistra albopurpurea is unique in the genus with a white/red stigma in striking contrast to the large milk‐white tube base. Aspidistra stellata belongs to a group of species with extraordinary long and narrow lineate perigone lobes. Aspidistra khangii and A. lubae belong to a small group of species having erect, vertical shoots. The first species is easily distinguished by its stout stem, down‐curved peduncle and obpyramidal, container‐shaped perianth. Aspidistra lubae has characteristic horizontal, peduncles and urceolate flowers. Besides the type variety, A. lubae includes var. lancifolia, which differs in its erect, lanceolate, immaculate, shortly petiolate leaves. Both varieties of A. lubae were found growing, often intermixed, in the same locality in very similar ecological conditions.     

Secondary metabolite profiling of Alternaria dauci, A. porri, A. solani, and A. tomatophila

Chemotaxonomy (secondary metabolite profiling) has been shown to be of great value in the classification and differentiation in Ascomycota. However, few studies have investigated the use of metabolite production for classification and identification purposes of plant pathogenic Alternaria species. The purpose of the present study was to describe the methodology behind metabolite profiling in chemotaxonomy using A. dauci, A. porri, A. solani, and A. tomatophila strains as examples of the group. The results confirmed that A. dauci, A. solani, and A. tomatophila are three distinct species each with their own specific metabolite profiles, and that A. solani and A. tomatophila both produce altersolanol A, altertoxin I, and macrosporin. By using automated chemical image analysis and other multivariate statistic analyses, three sets of species-specific metabolites could be selected, one each for A. dauci, A. solani, and A. tomatophila.     

SYNTHETIC AGROPYRON-ELYMUS HYBRIDS: III. ELYMUS CANADENSIS X AGROPYRON CANINUM,A. TRACHYCAULUM,AND A. STRIATUM

Hybrids were produced with relative ease from controlled crosses of Elymus canadensis L. with European Agropyron caninum (L.) Beauv., North American A. trachycaulum (Link) Malte ex H. F. Lewis, and Asian A. striatum Nees ex Steud. All hybrids appeared to be completely sterile and were, for the most part, morphologically intermediate between their parents. The E. canadensis × A. caninum hybrids were exceptionally vigorous and leafy and may have some potential as forage grasses if fertility can be achieved. All parent plants were tetraploid, 2n = 28, and they behaved cytologically as alloploids. Chromosome pairing in the hybrids indicated that both E. canadensis genomes were closely homologous with those of A. trachycaulum and somewhat less homologous with those of A. caninum. Interchanged and inverted chromosome segments apparently constitute the major differences between E. canadensis, A. trachycaulum, and A. caninum genomes; however, cryptic structural differences must also exist. Partial homologies were detected between one A. striatum and E. canadensis genome, but their other genomes were distinctly different. The genome relations between the parent species were expressed in terms of the following genome formulas: E. canadensis, S₁S₁X₁X₁; A. trachycaulum, S₂S₂X₂X₂; A. caninum, S₃S₃X₃X₃ : and A. striatum S₄S₄YY or X₄X₄YY, where “S” refers to a genome derived from A. spicatum and “X” and “Y” are genomes of unknown origin.     

Handbook of Spatial Statistics edited by GELFAND,A. E., DIGGLE,P. J., FUENTES,M. and GUTTORP,P.

Handbook of Spatial Statistics (A. E. Gelfand, P. J. Diggle, M. Fuentes, and P. Guttorp, Editors) Daniel Commenges Computational Statistics (J. E. Gentle) Thomas Lumley Bayesian Missing Data Problems: EM, Data Augmentation and Noniterative Computation (M. T. Tan, G.‐L. Tian, and K. W. Ng) Alessandra Mattei A First Course in Bayesian Statistical Methods (P. D. Hoff) Dalene Stangl Environmental and Ecological Statistics with R (S. S. Qian) Andrew Finley A Modern Approach to Regression with R (S. J. Sheather) Mervyn G. Marasinghe Exercises and Solutions in Biostatistical Theory (L. L. Kupper, B. H. Neelon, and S. M. O’Brien) Scott S. Emerson ggplot2 : Elegant Graphics for Data Analysis (H. Wickham) Leland Wilkinson     

TAXONOMY OF ADAMSIELLA L.E. PHILLIPS ET W.A. NELSON,GEN. NOV. AND EPIGLOSSUM KÜTZING (RHODOMELACEAE,CERAMIALES)1

In a taxonomic/phylogenetic study of the genus Lenormandia, several species were found to differ significantly from the type species, L. spectabilis Sonder, in apical morphology, blade‐surface pattern, medullary construction, the presence of pseudopericentral cells, and the position of reproductive structures. These species constitute two groups that differ morphologically, a finding largely supported by analysis of 18S rRNA sequences, as reported previously. The two putative Lenormandia species from New Zealand, along with two previously undescribed species also from New Zealand, comprised one such group, designated here by the new genus name Adamsiella L.E. Phillips et W.A. Nelson, gen. nov. and including A. melchiori L.E. Phillips et W.A. Nelson, sp. nov., A. lorata L.E. Phillips et W.A. Nelson, sp. nov., A. angustifolia (Harvey) L.E. Phillips et W.A. Nelson, comb. nov., and A. chauvinii (Harvey) L.E. Phillips et W.A. Nelson comb. nov. Adamsiella differs from Lenormandia by incurved apices, a chevron surface pattern, and reproductive structures on dorsi‐ventrally flattened apically incurved polysiphonous branchlets usually produced at the margins. Two species endemic to Australia formed the second group designated by the resurrected generic name Epiglossum and also characterized by a strongly incurved apex and chevron surface pattern but with reproductive structures produced on terete polysiphonous branchlets found either on the midrib or elsewhere on the blade surface but not the margins. Epiglossum contains E. smithiae (J.D. Hooker et Harvey) Kützing and E. proliferum (C. Agardh) L.E. Phillips, comb. nov.     

Caprine blood groups. 2. The C,G, H,I, J,K, L,N, and Q systems

Nine blood group systems of goats were identified using 12 caprine reagents produced by absorption of alloimmune antisera. The caprine C blood group system, possibly homologous to the ovine C blood group system, was characterized by two reagents and shown to be controlled by three alleles,C ¹²,C ²⁵, andC ⁻. A more complex blood group system of goats, designated G, was identified using three reagents and shown to be controlled by six codominant alleles (G ^10.19.20,G ^10.19,G ^10.20,G ¹⁰,G ¹⁹,G ²⁰) and a recessive allele (G ⁻). A further seven one-factor two-allelic systems were identified by seven reagents. The nine genetic systems provided exclusion probabilities of 0.479, 0.492, 0.548, and 0.572 in Australian Angora, Dairy, Cashmere, and Texan Angora goat breeds, respectively. This work was supported by a grant from the Australian Stud Book, Alison Road, Randwick, New South Wales 2031, Australia.     

Bryophytes of St Helena,South Atlantic Ocean. 8. Lepidopilidium crispifolium,sp. nov. (Hookeriales,Pilotrichaceae)

Abstract

A new species of Lepidopilidium (Pilotrichaceae, Hookeriales), L. crispifolium, sp. nov. from St Helena, South Atlantic Ocean is described and illustrated.     

New red alga, Acanthopeltis longiramulosa sp. nov. (Gelidiales, Rhodophyta) from Jeju Island, Korea

A new red alga from Jeju Island, Korea is described. The alga is assigned to Acanthopeltis, Gelidiaceae by the characteristics of terete erect axes, sympodial growth, and suborbicular branchlets that are amplexi‐caul at the base. Acanthopeltis longiramulosaY. Lee et Kim is characterized by a discoid holdfast with a few stolons, rhizoids arising from the apex of the branchlet, an erect terete axis diverging into a few branches, longish obpyriform to lanceolate branchlets with smooth surfaces, and tetrasporangial stichidia or sper‐matangial and cystocarps appendages on the marginal region of the branchlet. A. longiramulosa is more closely related to Acanthopeltis japonica than Acanthopeltis hirsuta in terms of thallus morphology. However, A. longiramulosa is easily distinguished from A. japonica, which has suborbicular branchlets with setaceous processes on both surfaces.     

Development of enzyme technology for Aspergillus oryzae,A. sojae,and A. luchuensis,the national microorganisms of Japan

This paper describes the modern enzymology in Japanese bioindustries. The invention of Takadiastase by Jokiti Takamine in 1894 has revolutionized the world of industrial enzyme production by fermentation. In 1949, a new γ-amylase (glucan 1,4-α-glucosidase, EC 3.2.1.3) from A. luchuensis (formerly designated as A. awamori), was found by Kitahara. RNase T₁ (guanyloribonuclease, EC 3.1.27.3) was discovered by Sato and Egami. Ando discovered Aspergillus nuclease S₁ (single-stranded nucleate endonuclease, EC 3.1.30.1). Aspergillopepsin I (EC 3.4.23.18) from A. tubingensis (formerly designated as A. saitoi) activates trypsinogen to trypsin. Shintani et al. demonstrated Asp76 of aspergillopepsin I as the binding site for the basic substrate, trypsinogen. The new oligosaccharide moieties Man₁₀GlcNAc₂ and Man₁₁GlcNAc₂ were identified with α-1,2-mannosidase (EC 3.2.1.113) from A. tubingensis. A yeast mutant compatible of producing Man₅GlcNAc₂ human compatible sugar chains on glycoproteins was constructed. The acid activation of protyrosinase from A. oryzae at pH 3.0 was resolved. The hyper-protein production system of glucoamylase was established in a submerged culture.     

The Statistical Analysis of Recurrent Events by COOK, R. J. and LAWLESS, J. F.

The Statistical Analysis of Recurrent Events (R. J. Cook and J. F. Lawless) Chiung‐Yu Huang and Xianghua Luo Introduction to Empirical Processes and Semiparametric Inference (M. R. Kosorok) Changyong Feng Uncertain Judgements: Eliciting Experts' Probabilities (A. O'Hagan, C. E. Buck, A. Daneshkhah, J. R. Eiser, P. H. Garthwaite, D. J. Jenkinson, J. E. Oakley, and T. Rakow) James M. Dickey Models for Intensive Longitudinal Data (T. A. Walls and J. L. Schafer, editors) Daniel Farewell Quantitative Environmental Risk Analysis for Human Health (R. A. Fjeld, N. A. Eisenberg, and K. L. Compton) Scott M. Bartell Reliable Reasoning: Induction and Statistical Learning Theory (G. Harman and S. Kulkarni) Oliver Schulte Modeling Infectious Diseases in Humans and Animals (M. J. Keeling and P. Rohani) Carol Y. Lin Cluster and Classification Techniques for the Biosciences (A. H. Fielding) Morven Leese Modern Applied U‐Statistics (J. Kowalski and X. M. Tu) Jesse Frey Handbook of Statistical Genetics, 3rd edition (D. J. Balding, M. Bishop, and C. Cannings, editors) Karin Bammann, Ronja Foraita, Frauke Günther Quality of Life: The Assessment, Analysis, and Interpretation of Patient‐Reported Outcomes, 2nd edition (P. M. Fayers and D. Machin) Jeff A. Sloan, Amylou Dueck, Rui Qin, Wenting Wu, Pamela J. Atherton, Paul Novotny, Heshan Liu, Kelli N. Burger, Angelina D. Tan, Daniel Szydlo, Victor M. Johnson, Sara J. Felten, Xinghua Zhao, and Brent Diekmann Advanced Distance Sampling: Estimating Abundance of Biological Populations (S. T. Buckland, D. R. Anderson, K. P. Burnham, J. L. Laake, C. L. Borchers, and L. Thomas) Carl James Schwarz Brief Reports by the Editor The Construction of Optimal Stated Choice Experiments: Theory and Methods (D. J. Street and L. Burgess) Design and Analysis of Experiments, Volume 1: Introduction to Experimental Design, 2nd edition (K. Hinkelmann and O. Kempthorne) Introduction to Bayesian Statistics, 2nd edition (W. M. Bolstad) Asymptotic Theory of Statistics and Probability (A. Dasgupta) Bootstrap Methods: A Guide for Practitioners and Researchers, 2nd edition (M. R. Chernick)     

Alyssum kaynakiae sp. nov. (sect. Gamosepalum,Brassicaceae) from southwest Anatolia,Turkey

A new species, Alyssum kaynakiae Y?lmaz, is described from southwest Anatolia, Turkey. The new species belongs to Alyssum sect. Gamosepalum (Hausskn.) T. R. Dudley. Alyssum kaynakiae is closely related to A. niveum T. R. Dudley, but differs by its biennial life form, longer ascendent stems, not imbricated linear cauline leaves and equally inflated fruits.     

Aquabacter spiritensis,gen. nov., sp. nov. an aerobic,gas-vacuolate aquatic bacterium

A gram-negative, rod-shaped, gas-vacuolate, aerobic, heterotrophic bacterium was isolated from Spirit Lake, Washington. It was further characterized by phase-contrast and electron microscopy and phenotypic tests. The isolate does not utilize carbohydrates. Deoxyribonucleic acid-ribosomal ribonucleic acid (rRNA) hybridizations showed that this bacterium is a member of rRNA superfamily IV where it occupies a separate position on the Azorhizobium caulinodans rRNA sub-branch which, is part of an rRNA cluster containing also the Beijerinckia, the Bradyrhizobium japonicum and the Rhodopseudomonas palustris sub-branches. Its relationship to other gas-vacuolated genera within rRNA superfamily IV is discussed. A new genus Aquabacter with one species Aquabacter spiritensis is proposed. The type strain is strain SPL-1 (=ATCC 43981=LMG 8611).     

Sargassum boreale sp. nov. (Fucales, Phaeophyceae) from Hokkaido, Japan

A new species, Sargassum boreale Yoshida et Horiguchi is described. It belongs to the subgenus Bactrophycus section Teretia, with cylindrical receptacles and is distinct from Sargassum confusum C. Agardh, S. pallidum (Turner) C. Agardh and Sargassum microceratium (Turner) C. Agardh in having a rather elongated stem with smooth surface and distantly issuing main branches, with narrow leaves. The distinction between S. boreale and these species is also revealed by a difference in internal transcribed spacer 2 (ITS‐2) sequences. In addition to the base substitutions, the existence of a large gap in S. boreale distinguishes this species from others. Sargassum boreale is distributed around Hokkaido and Saghalien to 50°N latitude. A key to the species of section Teretia is provided.