Évolution temporelle de la diversité génétique de Chaerophyllum bulbosum : conséquences sur la gestion des ressources génétiques

To increase the germplasm necessary for varietal improvement of tuberous-rooted chervil, a food apiaceae of increasing importance, two successive surveys of wild populations were carried out in Germany, in the Rhine and the Weser River basins. These mainly riparian populations are likely to be shaped by changes in hydrographic networks that characterize their habitat. Molecular studies have shown a strong structuration between wild populations (G_ST ∼ 32 %), but did not reveal any structuring effect of the hydrographic network on diversity or any global phenomenon of genetic erosion. A discussion about the strategy for maintaining the diversity of this species on a long-term period is proposed.     

Les pistes dinosauroïdes du Trias moyen français : interprétation et réévaluation de la nomenclature

Numerous dinosauroid footprints which showing sometimes manus imprint mark were gathered, since 1960, from the lower sandstones Triassic formations of the eastern border of the Massif Central (France). Tracks bearing levels are dated from palynological, micropalaeontological and palichnological data. They belong to the period upper Anisian-lower Ladinian. The paleontological results show bipedal digitigrade reptiles with erected, long hind limbs, having also pentadactyl mani and (II-IV) tridactyl feet. The osteological feet inferred structure is like that of Ceratosauria of Late Triassic age. The skeletons of first Dinosauria, diversified already well, are known in summit Ladinian and lower Carnien and those of their ancestors, Dinosauriformes, in Ladinian. And, for this reason, the aniso-ladinian dinosauroid footprints are ascribed to these last animals which thus appeared earlier, to Anisan even to late Olenekian. The chirotheroid hands show a “pseudosuchian” origin which possibly took place during the late Olenekian; feet modifications of these Crurotarsi being characterized by I and V digits reduction and a meso-tarsal joint. The Anisian-Ladinian dinosauroid footprints are ascribed to the ichnospecies Coelurosaurichnus perriauxi and Anchisauripus bibractensis. The discriminant analysis computed from these latter ichnospecies, and others from the German Triassic, French and USA Hettangian indicate that C. perriauxi and A. bibractensis can not be included into Grallator sensu Lull, 1953 or Coelurosaurichnus of Franconie. By this way, these taxa are well original and till now, there was no reason to change their nomenclature. Nevertheless because the numerous changes of Grallator which gathers now, most of dinosauroid footprints, it could be possible to include them into Grallator for the feet and into Atreipus when the manus trace is connected with the foot.     

Caractérisation de la production particulaire par l’oursin Echinometra mathaei sur les récifs Indo-Pacifiques : influence des peuplements coralliens et implications sur la dynamique sédimentaire

The characteristics of the sedimentary grains produced by the sea urchin Echinometra mathaei were described from two reef sites: a fringing Acropora-dominated reef at La Reunion island (Indian Ocean) and a barrier Porites-dominated reef at Moorea island (French Polynesia). The composition of the sediment produced by Echinometra was determined from SEM observations. The size and shape of the particles were measured by using image analysis method. The grain diameters range between a few micrometres and 2 mm, with a large predominance (more than 80 %) of particles smaller than 400 μm. The grain size distribution is dependent on the nature of the grazed substratum. Echinometra individuals collected at La Reunion on branching Acropora colonies produce a higher proportion of particles smaller than 200 μm compared to those collected at Moorea on massive Porites colonies. At Moorea, more grains having a diameter comprised between 200 and 500 μm are produced. The microstructure of coral substrata affects the mean particle diameter, which is 192,17 μm for a Acropora substratum and 244,69 μm for a Porites substratum. Since the sediment derived from Acropora erosion is finer, the proportion of suspended material that is exported from the reef is greater at La Reunion than at Moorea. We estimate that, for similar erosion rates and hydrodynamic conditions, the production of sands by Echinometra mathaei is higher and the retention of this erosional sediment more effective on reefs dominated by massive Porites than on Acropora-dominated reefs. This result is in accordance with the proportions of suspension-moving grains that have been previously measured on Moorea and La Reunion reefs. This study highlighted the effect of coral communities on the production of particles related to the bioerosion and on the sedimentary budget.     

Importance de la Mérione de Shaw Meriones shawii au sein des composantes trophiques de la Chouette effraie Tyto alba en milieux steppiques de l’Algérie

The study of the diet of the Barn Owl in two steppic regions (M'Sila and Djelfa) located in the Algerian highlands is based on the analysis of the pellets of rejections collected in six stations. The analysis of 706 pellets resulting from the various stations made it possible to count 1380 individuals, represented by seven classes, 12 orders, 32 families, and 76 species of preys. The mammals are consumed with variable abundance rates between 59.1 % and 90.0 % whose predominance is assigned to the rodents (relative abundance: AR > 58 %). The latter constitute the most advantageous preys in biomass (61.4 ≤ B % ≤ 99.2). The most consumed prey is Meriones shawii, with variable rates between 31.9 % and 76.6 %. Generally, Tyto alba presents a diversified diet in the majority of the stations (0.69 ≤ E ≤ 0.76), except the station of Ain El-Hadjel (E = 0.35), with a low diversity and dominance of M. shawii (AR = 76.6 %).     

Diaceratherium massiliae nov. sp. des argiles oligocènes de Saint-André et Saint-Henri à Marseille et de Les Milles près d’Aix-en-Provence (SE de la France), premier grand Rhinocerotidae brachypode européen

A revision of all previously collected mammalian fossils from the two Late Oligocene sites of Saint-André and Saint-Henri in Marseille (both from the MP 26 reference-level) allows us to identify three Rhinocerotoidea species: Protaceratherium albigense, Ronzotherium romani, Diaceratherium massiliae nov. sp., and maybe a fourth one, Eggysodon cf. gaudryi. Only the first two were previously known there. D. massiliae nov. sp. is found together with R. romani; it is the first case of sympatry ever known between the two genera. D. massiliae nov. sp. is then the most ancient Diaceratherium in Europe, where the genus was previously unknown before the MP 29 reference-level. It is a very large species whose limb bones proportions foreshadow these of the later species of the genus, especially D. lemanense from the Late Oligocene-Early Miocene. This suggests a possible phylogenetic link between D. massiliae nov. sp. and D. lemanense, and the coexistence of at least two different but partially contemporaneous lineages among the European Diaceratherium. In Les Milles near Aix-en-Provence, also from the MP 26 reference-level, the three species P. albigense, R. romani and D. massiliae nov. sp. were also found.     

Les Spatangus du Miocène et du Pliocène de l’Ouest de la France

Numerous fragments of spatangoid echinoids have been discovered in the Pliocene deposits of Challans, in Vendée (western France). In spite of the fragmentary data of the samples, a reconstitution of a complete test could be realized using the different fragments and their symetrization. The general shape of the test, and its architectural and ornemental characters allow establishing the presence of the genus Spatangus in western France during the end of Neogene. It allows to precise the biogeography of the genus Spatangus and of the morphological group S. (S.) purpureus on the Atlantic coast after the Messinian crisis. The Pliocene species is compared to the Miocene Spatangus (Phymapatagus) brittanus, abundant in Anjou, Brittany and Touraine. This older species was refered to the subgenus Phymapatagus according to the presumed lack of primary tubercles on its posterior interambulacrum. The discovery of well-preserved specimens, with primary tubercles on every parts of the test, in the Middle Miocene of Brittany allows to refute this subgeneric distinction and to refer the species brittanus to the subgenus Spatangus (Spatangus). The presence of this subgenus in western France is finally confirmed from Middle Miocene to Pliocene.     

Cristatopecten nov. gen. benoisti (Pectinidae, Bivalvia) du Chattien d'Aquitaine (France). Révision systématique et réflexions sur l'origine et l'évolution des Cristatopecten

The detailed study of a sample of “Pecten (Amussiopecten) benoisti” Cossmann and Peyrot (1914) from the Chattian outcrops of the Adour Basin, allowed to improve our knowledge of this species poorly known till now and to show its important ornamental variability. It follows that some nomenclatural points have been clarified at the generic level: we refute the attribution of this species to the genus Amussiopecten Sacco (1897) as used by authors—genus which was besides emended several times subsequently— and we propose its allocation to Cristatopecten nov. gen. Furthermore, this study allowed to remove the ambiguity existing originally as for the attribution of the species benoisti and burdigalensis to a same genus: our comparison of the latter two taxa shows that if benoisti has to be henceforth included in the new genus Cristatopecten (as its type species), burdigalensis (which is the type species of Amussiopecten) must be incorporated in the genus Flabellipecten Sacco (1897). The two genera Amussiopecten and Flabellipecten are therefore synonymous, as Depéret and Roman had already stated in 1910. The Cristatopecten from the Old World seem to be derived from a group of “Aequipecten” notably known in the Italian Rupelian, the group of “Aequipecten deletus” (Michelotti, 1861), of which we study here a sample from the Aquitaine Chattian. In the Aquitaine Basin, the Cristatopecten are represented, in the Chattian, by Cristatopecten benoisti (Cossmann and Peyrot, 1914); in the Lower Aquitanian, by C. praehaueri (Bongrain, Cahuzac and Freneix, 1994); in the Burdigalian-Langhian of the Saubrigues paleocanyon, by C. haueri (Michelotti, 1847) and C. miogallicus (Cossmann and Peyrot, 1914). During the whole Neogene, they spread and evolved in the Tethys and the Paratethys areas, and seem to have become extinct in the Pliocene with the disappearance of C. cristatus (Bronn, 1827), a species that we consider not as an Amusium s.s., but as the last representative of the Cristatopecten phylum.     

Una nueva especie de Weltrichia (Bennettitales) del Jurásico Medio de la Formación Tecomazuchil (Oaxaca, México)

A new species of Weltrichia (Williamsoniaceae: Bennettitales) is described from the Middle Jurassic of Oaxaca. The specimens come from the Tecomazuchil Formation in the Ayuquila region, at the border between the Oaxaca and Puebla states. Fossils are preserved as impressions and compressions, in a fine-grained sublitharenite sequence deposited in a fluvial environment. Preserved diagnostic characters include: large size; a cup-shaped receptacle showing seven radially arranged and basically fused microsporophylls bearing synangia. Microsporophylls are ornamented with longitudinal striations and fine brittled hairs on the edge of their wide base, and taper into a narrow distal tip. In the adaxial part of the microsporophylls seven to nine synangia are observed. These characters differentiate the new species Weltrichia mixtequensis from all previously recorded species from Mexico or elsewhere. The presence of this new species in the Middle Jurassic strata of the Ayuquila region add to the scarce fossil record of microsporangiate structures in the Jurassic flora of Mexico.     

Le genre Nucleolites (Echinoidea, Cassiduloidea) du Bajocien à l'Oxfordien dans le Bassin de Paris : apport des données architecturales à la systématique et à la phylogénie

The classification of the Paris basin Bajocian-Oxfordian species of the genus Nucleolites is revised. A classic point of view, until now used by authors and mainly based on the general morphology of the test, is first developed. Then, this last is modified with new architectural data, which refer to the extraxial-axial theory concerning the structure of the apical system as well as the presence of supplementary and catenal plates. These architectural data are first used facing the general morphology of the test. Such approach leads to a new point of view for the classification of the species of the genus Nucleolites. The systematics is particularly significantly simplified. The deduced and proposed phylogenetic hypothesis shows that the genus Nucleolites is composed of two parallel lineages as soon as the beginning of the genus in the Bajocian: a group with a so-called “primitive” architecture, and a group with an “advanced” one. On and after the Late Callovian, the species with a primitive organisation give birth to advanced species, which continue in younger time. In this way, the genus Nucleolites may be paraphyletic since the Late Callovian onward.     

Restes humains dans les sédiments du Pléistocène inférieur de la région d'Orce et de Cueva Victoria (sud-est de l'Espagne)

This paper describes the human remains and other evidence of human presence (lithic artifacts) located in the early Pleistocene deposits of Orce and Cueva Victoria (SE Spain). We also discuss the age of those sites.     

Les Megacricetodon du gisement karstique miocène moyen de Blanquatère 1 (Pyrénées-Orientales, Sud de la France) : nouvelles espèces, implications biochronologique et phylogénique

Three Megacricetodon species are recognized in the Middle Miocene locality of Blanquatère 1 (Languedoc-Roussillon province, France). Two are new, the small-sized M. tautavelensis nov. sp. the medium to large-sized M. aunayi nov. sp., the third one being the already known M. “collongensis-gersii”, a medium-sized species found in other Miocene localities of the area. Size and morphology differentiate these species. Such a high number of contemporaneous species of the genus Megacricetodon is found for the first time in a Miocene locality in the region and indicate that the evolution of this genus in western Europe is likely more complicated. It may testify both of a biogeographical differentiation and of migration events. According to our calibration charts, the deposit is dated ca. 16 Ma ago. The position of Vieux-Collonges (MN 5) and Sansan (MN 6) on the biochronological scale is also discussed, as well as the estimated age of the biozonal boundaries MN 3/MN 4, MN 4/MN 5 and MN 5/MN 6.     

Influence de la temperature sur le metabolisme des flavonoides chez Asplenium trichomanes

Temperature controls the seasonal variation in leucoanthocyanin and flavonol production in the fern Asplenium trichomanes. The mean temperature is a more important parameter than the diurnal variation. At low temperatures (12°), the biosynthesis of flavonols is favoured over that of Leucoanthocyanin, which is apparently less sensitive to this environmental factor.     

Le Middle Stone Age de la grotte du Porc-Épic (Dire Dawa, Éthiopie) : gestion des matières premières et comportements techniques

With the emergence of Modern Humans in Africa a new post-Acheulean culture seems to take form: the Middle Stone Age. Although the geo-chronological limits of this period remain unclear, it may however be characterised by behavioural modifications, in particular an important change in the relationship between humans and their environment. Theses changes may partially result from the diversification of stone-tool production techniques, as well as socio-economical conditions. Sites dating of this period show that flake types are more abundant and result from exploitation methods that become gradually more sophisticated from about 300ka.In this context, study of the lithic assemblage from Porc-Epic Cave in Ethiopia contributes to the knowledge about operative methods used during the Middle Stone Age. The combined production of flakes, blades, bladelets and points using various methods, a differential economy towards raw materials and the diversity of tool types produced, underline the large extent of technological variability that the Porc-Epic tool-makers were capable of. We may conclude that, in spite of certain differences concerning raw material acquisition, a chronological homogeneity exists in the production modes and their variability. This apparent homogeneity throughout the stratigraphical sequence underlines the difficulty of attributing a cultural characteristic to stone assemblages of this period.     

Una nueva especie de Pachynolophus (Mammalia, Perissodactyla) de Zambrana (Álava, Región Vasco-Cantábrica). Análisis filogenético de Pachynolophus y primera cita en el Eoceno superior de la Península Ibérica

Recent fieldwork in the Late Eocene of Zambrana (Álava, Basque-Cantabrian Region) has yielded a new species of Pachynolophus: P. zambranensis nov. sp. According to the phylogenetic analysis made in this study, the Zambrana species is part of the monophyletic Pachynolophus, which is defined at least by three synapomorphies: significant progressive increase of the size in the M1/1-M3/3 series, being M3/3 outstandingly bigger than M2/2; moderate increase of the relative surface of M3/ with respect to M2/ surface, and weak labial cingula in the lower series. Pachynolophus includes the species P. duvali, P. livinierensis, P. garimondi, P. lavocati, P. zambranensis, P. boixedatensis and P. cesserasicus. P. molipotensis and P. cayluxi are not represented by sufficient material to attribute them to Pachynolophus. P. bretovensis does not share a synapomorphy of Pachynolophus and P. hookeri should not be referred to this genus. P. zambranensis shares several synapomorphies with P. garimondi and P. lavocati, which are: the posprotocrista of the P3-4/ series is a well-defined lophe; the P4/ has a subquadrangular outline and shows a strong posterolingual cingulum, forming a posterior widening; and there is an “incipient mesostyle” (pseudomesostyle?) in the upper molars. The species P. zambranensis is mainly characterized by lophodont dentition, with the postprotocrista obliquely oriented to the ectoloph in the P3-4/ series, and a “pseudomesostyle” also present in the P3-4/ series. It represents the first mention of the genus Pachynolophus described in the Late Eocene of the Iberian Peninsula.     

Reconstitution 3D par Computerized-tomography (CT) et endocrâne virtuel du crâne 5 du site de la Sima de Los Huesos (Atapuerca)

The 3d Ct reconstruction and virtual brain endocast of Cranium 5 from the site of “La Sima de los Huesos” (Atapuerca), allows us to get new information to increase the study and knowledge of Homo heidelbergensis population, and to compare this specimen with others in the fossil record, in order to understand the evolutionary process of the brain, focusing on the middle Pleistocene period. Furthermore, we can observe the changes this species (Homo heidelbergensis) has undergone, at least in Sima de los Huesos population making comparative studies with African and Asian middle Pleistocene specimens. We have used the new data to compare European Homo heidelbergensis represented by SH5 with Kabwe, a controversial specimen considered by some authors like the African Homo heidelbergensis representative, in order to establish the similarities and differences between both specimens.     

Nouveau matériel de Leptobos (Smertiobos) crassus (Artiodactyla, Mammalia) du Pléistocène inférieur à Renzidong (Chine de l’Est)

New remains of Leptobos (Smertiobos) crassus have been identified among the fossils excavated from a new early Pleistocene site at the Renzidong in Anhui Province, Eastern China. It is a Leptobos bearing frontal appendices with a simple curvature and its distal part turns higher than the other species of the subgenus. The present study shows that the first appearance of Leptobos in China is in the zone equivalent to the European MNQ 16b, later than its first appearance in Western Europe (MNQ 16a); and the genus Leptobos can serve as index fossil of the lower Pleistocene in China (2.5-0.78 Ma, Chinese definition).     

Influence des inflorescences de la plante hôte (Vigna unguiculata) sur la levée de la diapause reproductrice de Bruchidius atrolineatus

Bruchidius atrolineatus (Pic) présente en zone sahélienne une diapause reproductrice durant la saison sèche et une partie de la saison des pluies. Les femelles diapausantes ne produisent pas de vitellogénine et le germarium des ovarioles est seul développé. Chez les mâles la spermatogenèse est très ralentie et les glandes annexes sont inactives. Lorsque les insectes diapausants sont placés en présence d'inflorescences de Vigna unguiculata Walp, leurs organes reproducteurs deviennent fonctionnels après un temps de latence de 15 à 20 jours. Il n'y a par contre aucune levée de la diapause chez des bruches placées en présence de gousses sèches de V. unguiculata dans une atmosphère saturée. Des informations sensorielles issues des pièces florales ou (et) des facteurs nutritionnels sans doute liés a la consommation de nectar semblent être à l'origine de cette levée de la diapause. Le pollen fort peu consommé n'a par contre aucun rôle. Cette régulation du cycle reproducteur de B. atrolineatus par les inflorescences de V. unguiculata permet l'émission des oeufs dès que les gousses commencent à se former à la fin de la saison des pluies.

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Summary Bruchidius atrolineatus (Pic) is a widely distributed bruchid in the Sahelian zone which shows a reproductive diapause during the dry season and part of the rainy season. Diapausing females do not produce vitellogenin and their ovaries are reduced to the germarium. Spermatogenesis is very much reduced and male accessory glands are inactive. When these insects were placed in the presence of inflorescences of Vigna unguiculata which were renewed daily, the reproductive diapause of both males and females was interrupted after 15–20 days. Vitellogenesis occurred in the females and spermatogenesis increased in the males whilst their accessory glands became functional. When diapausing bruchids, found in stores of on V. unguiculata seeds during the dry season, were placed near the host plant's inflorescences, diapause was also terminated. In all cases, diapause was not interrupted when the insects were offered dry pods of V. unguiculata in a water-saturated atmosphere. The pollen, which is hardly eaten by this bruchid, did not seem to stimulate termination of diapause. Sensory stimulations derived from the flowers or/and nutritional factors may be the cause of the development of the reproductive organs. After termination of the diapause the males showed normal sexual activity whereas female fecundity was rather low, at least in our experimental conditions. This type of reproductive regulation allows this sahelian bruchid to resume its sexual activity when the host plant's flowers appear in the field at the end of the rainy season. Then the beetles lay their eggs on the pods as soon as the pods are developed.

     

Phylogenetic reassessment of Hyaloscyphaceae sensu lato (Helotiales, Leotiomycetes) based on multigene analyses

Hyaloscyphaceae is the largest family in Helotiales, Leotiomycetes. It is mainly characterized by minute apothecia with well-differentiated hairs, but its taxonomic delimitation and infrafamilial classification remain ambiguous. This study performed molecular phylogenetic analyses using multiple genes including the ITS-5.8S rDNA, the D1–D2 region of large subunit of rDNA, RNA polymerase II subunit 2, and the mitochondrial small subunit. The primary objective was to evaluate the phylogenetic utility of morphological characters traditionally used in the taxonomy of Hyaloscyphaceae through reassessment of the monophyly of this family and its genera. The phylogenetic analyses inferred Hyaloscyphaceae as being a heterogeneous assemblage of a diverse group of fungi and not supported as monophyletic. Among the three tribes of Hyaloscyphaceae only Lachneae formed a monophyletic lineage. The presence of hairs is rejected as a synapomorphy, since morphologically diversified hairs have originated independently during the evolution of Helotiales. The true- and false-subiculum in Arachnopezizeae are hypothesized to have evolved through different evolutionary processes; the true-subiculum is likely the product of a single evolutionary origin, while the false-subiculum is hypothesized to have originated multiple times. Since Hyaloscyphaceae sensu lato was not resolved as monophyletic, Hyaloscyphaceae sensu stricto is redefined and only applied to the genus Hyaloscypha.     

Real-time PCR detection of Holophagae (Acidobacteria) and Verrucomicrobia subdivision 1 groups in bulk and leek (Allium porrum) rhizosphere soils

In the light of the poor culturability of Acidobacteria and Verrucomicrobia species, group-specific real-time (qPCR) systems were developed based on the 16S rRNA gene sequences from culturable representatives of both groups. The number of DNA targets from three different groups, i.e. Holophagae (Acidobacteria group 8) and Luteolibacter/Prosthecobacter and unclassified Verrucomicrobiaceae subdivision 1, was determined in DNA extracts from different leek (Allium porrum) rhizosphere soil compartments and from bulk soil with the aim to determine the distribution of the three bacterial groups in the plant-soil ecosystem. The specificity of the designed primers was evaluated in three steps. First, in silico tests were performed which demonstrated that all designed primers 100% matched with database sequences of their respective groups, whereas lower matches with other non-target bacterial groups were found. Second, PCR amplification with the different primer sets was performed on genomic DNA extracts from target and from non-target bacteria. This test demonstrated specificity of the designed primers for the target groups, as single amplicons of expected sizes were found only for the target bacteria. Third, the qPCR systems were tested for specific amplifications from soil DNA extracts and 48 amplicons from each primer system were sequenced. All sequences were > 97% similar to database sequences of the respective target groups. Estimated cell numbers based on Holophagae-, Luteolibacter/Prosthecobacter- and unclassified Verrucomicrobiaceae subdivision 1-specific qPCRs from leek rhizosphere compartments and bulk soils demonstrated higher preference for one or both rhizosphere compartments above bulk soil for all three bacterial groups.