Enhancement of microplankton respiratory activity in the Almeria-Oran Front (Western Mediterranean Sea)

The activity of the respiratory electron transfer system (ETS)in microplankton (<200 µm cell size) was measured alongdepth profiles from the surface to 100 m in the Almería-OranFront (Eastern Alboran Sea). ETS activity gives an estimationof respiratory metabolism of plankton that can be compared withbiomass and primary production values. Three regions, FrontalWater (FW), Mediterranean Surface Water (MSW) and Modified AtlanticWater (MAW), were sampled. Chlorophyll a was also determined.The front appears as an enriched region, with chlorophyll concentrationand ETS activity higher than in the adjacent waters. Changesin biomass and activity were strongly related to hydrographicconditions. Chlorophyll distributions were mostly influencedby depth, and ETS distribution by differences among the subregions.ETS activity showed a statistically significant correlationwith chlorophyll in the whole region and in the three subregions.Depth-integrated ETS activity showed an increase of 62% in frontalversus Mediterranean water, whereas the chlorophyll concentrationwas only 40% higher, indicating an enhancement of biomass-specificactivity. Depth-integrated respiration (estimated from ETS measurement)represents between 30 and 50% of depth-integrated primary productionaccording to published data on this zone.     

Detection of arylsulfatase A activity after electrophoresis in polyacrylamide gels: problems and solutions.

When arylsulfatase extracted from normal human skin fibroblasts was electrophoresed in polyacrylamide gels with a Tris-glycine buffer at pH 8.4–8.6, two problems occurred. First, no arylsulfatase A activity was detected. Second, an artifactual fluorescent spot was generated when the gels were stained for arylsulfatase activity with 4-methylumbelliferyl sulfate as substrate. The artifact simulated arylsulfatase A activity in mobility but also appeared when 4-methylumbelliferyl substrates for other enzymes were used. It can be eliminated by prerunning or prolonged storage of the gets before use. The arylsulfatase A activity, however, could be recovered only when a low pH buffer system (pH 58–68) was used for electrophoresis. The highest percentage recovery (70%) of activity was obtained in acrylamide gels polymerized with ammonium persulfate, prerun for 0.5 h before use and electrophoresed with an anode buffer of acetic acid-triethanolamine at pH 5.8.     

Respiratory electron transport activity in plankton of the Weddell and Scotia Seas during late spring — early summer: relationships with other biological parameters

Summary As a means to estimate potential oxygen consumption, profiles of elctron transport system (ETS) activity were made along three transects across the Weddell-Scotia Confluence zone (WSC) and the marginal ice zone (which overlapped in part) during the EPOS leg 2 cruise of the RV Polarstern. The integrated ETS activity between 0 and 100 m depth (referred to in situ temperatures) ranged from 261 meq (mili-electron equivalents) m^–2 day^–1 in the WSC to 45 meq m^–2 day^–1 in the southernmost stations at 62° S. The temporal changes in the overall distribution of ETS activity were small compared with the spatial variations. The main feature of the ETS activity distribution was the presence of maxima located in the WSC, coinciding with peaks of phytoplankton biomass. Different relationships between ETS and chlorophyll a concentration in these maxima appeared to be related to diatom or flagellate dominance. Vertically integrated ETS activities were significantly correlated with chlorophyll a and paniculate organic carbon concentrations, primary production and bacterial thymidine uptake.Data presented here were collected during the European Polarstern Study (EPOS) sponsored by the European Science Foundation     

Gradients of mesozooplankton biomass and ETS activity in the wind-shear area as evidence of an island mass effect in the Canary Island waters

Mesozooplankton biomass (displacement volume and proteins) andelectron transport system (ETS) activity have been studied aroundGran Canaria (Canary Islands) in the wind-shear field of theisland. Twenty-seven samples were taken after a period of strongnorth trade winds (>5 m s^–1) Biomass and ETS gradientswere observed on the island shelf close to the wind-shear field,at the boundary between the turbulent and calm waters in thewake of the island. Biomass gradient values were about threetimes higher than those found off the island shelf and twiceas high as those to the north of the island. ETS activity, ona volume basis, shows a similar result, which is not observedfor the specific activity. The development of gradients andtheir relation to an island mass effect are discussed. Significantdifferences were found between the values obtained along anoceanic transect to the south of the Archipelago and in thecoastal waters around Gran Canaria.     

Integration of bioconversion and downstream processing: starch hydrolysis in an aqueous two-phase system

Integration of bioconversion and the first step(s) of down stream processing can be used as a means to increase the productivity of bioprocesses. This integration also gives the possibility to run the bioconversion in a continuous mode. We demonstrate the use of an aqueous two-phase system in combination with ultrafiltration to accomplish this. Conversion of native starch to glucose by alpha-amylase and glucoamylase was carried out in an aqueous two-phase system in connection with a membrane filtration unit. In this way, a continuous stream of glucose in buffer solution was obtained; the phase-forming polymers as well as the starch-degrading enzymes were recycled, and clogging of the ultrafiltration membrane was avoided. The process was carried out continuously in a mixer-settler reactor for a period of 8 days. The enzyme activities in the top and bottom phases and in the mixing chamber were monitored intermittently throughout the experiment. The optimum pH, temperature, and ionic strength for the activity of the enzyme mixture were determined. The settling time of phase systems containing varying amounts of PEG, crude dextran, and solid starch was studied. The activity and stability of enzyme mixtures was studied both in buffer medium and in the medium containing the polymers. The enzymes were found to be more active and stable in medium containing polymers than in the buffer solutions.     

Glutamate dehydrogenase (GDH) and respiratory electron-transport-system (ETS) activities in Gulf of Mexico zooplankton

Ratios of GDH activity: NH₄⁺ excretion and ETS activity: oxygenconsumption were measured in western Gulf of Mexico zooplanktonand averaged 18.7 ? 4.3 and 2.65 ? 0.55, respectively. Theseratios were used to estimate NH₄₊ excretion and respirationrates of two natural zooplankton assemblages sampled quantitativelyfor GDH and ETS activity with a Multiple Opening and ClosingNet and Environmental Sensing System (MOCNESS). Greater than80% of the total GDH and ETS activity 0–200 m was concentratedin depth strata above the chlorophyll maximum, suggesting astrong zooplankton-phytoplankton grazing interaction. GDH activityper unit of zooplankton protein biomass was 3-fold greater inthe upper 100 m than between 100 – 200 m, while ETS activityper unit of zooplankton protein biomass showed no consistentpattern with increasing depth. O:N metabolic quotients wereestimated for the zooplankton sampled with the MOCNESS by ratioingGDH-excretion and ETS-respiratory by atoms. Lowest O:N quotientsoccurred in depth strata above the chlorophyll maximum, suggestinga predominance of protein-based grazing and/or predation. ¹Contribution No. 81-013 from the Bigelow Laboratory for OceanSciences     

Thermal sensitivity of mitochondrial functions in permeabilized muscle fibers from two populations of Drosophila simulans with divergent mitotypes

In ectotherms, the external temperature is experienced by the mitochondria, and the mitochondrial respiration of different genotypes is likely to change as a result. Using high-resolution respirometry with permeabilized fibers (an in situ approach), we tried to identify differences in mitochondrial performance and thermal sensitivity of two Drosophila simulans populations with two different mitochondrial types (siII and siIII) and geographical distributions. Maximal state 3 respiration rates obtained with electrons converging at the Q junction of the electron transport system (ETS) differed between the mitotypes at 24°C. Catalytic capacities were higher in flies harboring siII than in those harboring siIII mitochondrial DNA (2,129 vs. 1,390 pmol O(2)·s(-1)·mg protein(-1)). The cytochrome c oxidase activity was also higher in siII than siIII flies (3,712 vs. 2,688 pmol O(2)·s(-1)·mg protein(-1)). The higher catalytic capacity detected in the siII mitotype could provide an advantage in terms of intensity of aerobic activity, endurance, or both, if the intensity of exercise that can be aerobically performed is partly dictated by the aerobic capacity of the tissue. Moreover, thermal sensitivity results showed that even if temperature affects the catalytic capacity of the different enzymes of the ETS, both mitotypes revealed high tolerance to temperature variation. Previous in vitro study failed to detect any consistent functional mitochondrial differences between the same mitotypes. We conclude that the in situ approach is more sensitive and that the ETS is a robust system in terms of functional and regulatory properties across a wide range of temperatures.     

Size scaling of whole‐body metabolic activity in the noble crayfish (Astacus astacus) estimated from measurements on a single leg

1. Use of electron transport system (ETS) activity in a single leg for estimating whole‐body ETS activity was explored in the noble crayfish Astacus astacus. Oxygen consumption and ETS activity of the whole body and of a walking leg were measured in different‐sized animals at 10 °C to compare the size scaling of oxygen consumption, whole‐body ETS activity and the ratio of whole‐body ETS activity to oxygen consumption (ETS/R). 2. Electron transport system activity of a leg and the ratio of ETS activity of a whole crayfish to that of a leg were correlated with wet mass of animals. Therefore, metabolic potential in whole noble crayfish can be estimated on the basis of the measured ETS activity in a single leg and crayfish mass. This approach provides a valuable tool for determining metabolic characteristics of crayfish without killing them. 3. Mass‐specific oxygen consumption decreased with increasing wet mass, while ETS activity of whole crayfish showed no significant correlation with wet mass. Both oxygen consumption and ETS activity correlated significantly with protein mass. 4. The increase in ETS/R with increasing wet mass of the noble crayfish indicates that small organisms exploit a greater proportion of their metabolic potential for standard metabolism than larger ones. This is the first report on ETS/R in crayfish.     

A STUDY OF IN VITRO ELECTRON TRANSPORT ACTIVITY IN MARINE PHYTOPLANKTON AS A FUNCTION OF TEMPERATURE1

The in vitro temperature inactivation of the electron transport system (ETS) activity was measured for 11 phytoplankton species. The average inactivation temperature is between 18–23 C, but exceptions with inactivation temperatures as high as 43 C were noted for a tide pool phytoplankton, Dunaliella tertiolecta Butcher. Despite differences in temperatures at which the ETS activity begins to decrease, experimental values for the energies of activation (E) of electron transport are very similar and average ca. 12 kcal/mol. The results show the necessity of applying temperature corrections to in vitro ETS activity measurements when oceanic in situ oxygen consumption is computed from ETS activity measurements. The progress of thermal inactivation of the ETS activity in phytoplankton species studied yields biphasic curves. The biphasic nature of the curves is expressed when using both relatively high and low temperature of inactivation and in more or less heat sensitive species. These curves are described in terms of microsomal and mitochondrial substrate dependence. Based on the obtained temperature response of the ETS activity, the adaption of phytoplankton species to growth temperature is discussed.     

Factors affecting the manganese and iron activation of the phosphoenolpyruvate carboxykinase isozymes from rabbit.

Timed assays in which GTP and GDP were separated and quantitated by HPLC were developed and used to study the metal activation of the mitochondrial and cytosolic isozymes of phosphoenolpyruvate carboxykinase purified from rabbit liver. These assays allowed both directions of catalysis to be studied under similar conditions and in the absence of coupling enzymes. The mitochondrial enzyme is rapidly inactivated by preincubation with Fe2+, as had been shown previously for the cytosolic isozyme. The greatest activation by Fe2+ was obtained by adding micromolar Fe2+ immediately after enzyme to form the complete assay mixture that also contained millimolar Mg2+. In the direction of synthesis of OAA from Pep, the K0.5 values for Mn2+ and Fe2+ were in the 3-7 microM range when a nonchelating buffer, Hepes, was used. The buffer used strongly affected activation by Fe2+ at pH 7.4; activation was eliminated in the case of phosphate and K0.5 increased several-fold over that obtained with Hepes when imidazole was used. In non-chelating buffer, the pH optimum was near 7.4 for both isozymes and for both directions of catalysis. However, the near optimal pH range extended below 7.4 for the direction of oxaloacetate synthesis while the range was above 7.4 for Pep synthesis. In the direction of oxaloacetate synthesis: (1) Both isozymes required the presence of micromolar Mn2+ or Fe2+ in addition to millimolar Mg2+ in order to shown significant activity. (2) Fe2+ was as effective an activator as Mn2+ at pH 7 and below. In the direction of Pep synthesis: (1) Micromolar Mn2+ was a much better activator than Fe2+ at the higher pH values needed for optimal activity in this direction. (2) With increasing pH, decreasing activation was obtained with Fe2+ while the activity supported by Mg2+ alone increased. The results demonstrate the potential for regulation of either isozyme of Pep carboxykinase by the availability of iron or manganese.     

Comparative studies on the molecular weight of glutathione S-transferases from mammalian livers and an insect.

1. A comparative study was conducted on the molecular weights of glutathione S-transferases in the housefly and liver of the mouse and rat using Sephadex G-100 gel chromatography. 2. The values varied depending upon the buffers used in gel filtration. Molecular weights of 44,600, 53,600 and 43,000 daltons respectively were obtained with 0.01 M potassium phosphate buffer, pH 6.7; 0.05 M Tris-HCl buffer, pH 8.0; and 0.05 M Tris-HCl buffer containing 0.1 M KCl, pH 8.0, respectively. 3. There was no difference in the molecular weights of the enzymes obtained from the insect and from the mammalian livers. Purified enzymes eluted in the same fractions as those from the crude extracts, suggesting little modification in the molecular size of the enzymes during purification. 4. The presence of a large volume of stabilizer(s) in the enzyme solutions applied to the column delayed the elution of the activity peaks and resulted in erroneous values. Therefore, different literature values of molecular weights for glutathione S-transferases may be the result of different buffers and stabilizers used in gel filtration and probably do not represent a real difference in molecular size.     

Manganese Peroxidase production by Bjerkandera sp. BOS55

The use of ligninolytic enzymes in biotechnological applications requires a highly effective production system, with sufficient amounts of the enzymes to be applied in experimental research and herein after at large-scale operations. To reach this final goal, we propose scale-up of ligninolytic production of one of the most well-known enzymes, Manganese Peroxidase (MnP), by Bjerkandera sp. BOS55. Taking into account previous results obtained in shaken flask cultures, MnP production was attempted in stirred fermenters of 2, 10 and 50 l, with levels of activity comparable to those obtained at a lower scale. Additionally, environmental factors as agitation rate, fungus immobilisation and use of buffer were evaluated to maximise MnP production. A fed-batch strategy was proved to reactivate MnP production and to maintain MnP activity for a longer period of time. Operational parameters, such as pH and Redox potential, monitored along the fermentation were found to be useful indicators of MnP production. These variables experimented drastic changes at the MnP peak production, signalling the right moment to collect the enzyme.     

Effect of some factors on determination of viable microbial cells by peroxyoxalate chemiluminescence method

The effects of physical and chemical factors on the production of H₂O₂ from Escherichia coli cells were studied. When 20 mmol 1^-1 Tris-HCl buffer was used for this purpose the electron transport system (ETS) showed the highest activity at pH 7.6-8.2. KCN promoted the production of H₂O₂ from E. coli cells, and the optimum concentration was changed in different reaction times and pH values. Glucose, 5 mg ml^-1, increased the ETS activity about twofold. The other substrates and surfactants did not increase the chemiluminescence intensity. NaNO₂ and Na₂SO₄ in inorganic salts significantly reduced the ETS activity above 70%. In addition, the optimum temperature for the production of H₂O₂ was 30°C in this study. When glucose (5 mg ml^-1) and KCN (0.2 mmol 1^-1) were added to the reaction buffer containing 0.5 mmol 1^-1 menadione, the detectable minimum cell densities (averages of triplicate assay) of E. coli, Enterobacter cloacae and Serratia marcescens were 5 times 10³ cells ml^-1, 10⁴ cells ml^-1 and 10⁴ cells ml^-1 respectively.     

Finding stable cellulase and xylanase: evaluation of the synergistic effect of pH and temperature

Ethanol from lignocellulosic biomass has been recognized as one of the most promising alternatives for the production of renewable and sustainable energy. However, one of the major bottlenecks holding back its commercialization is the high costs of the enzymes needed for biomass conversion. In this work, we studied the enzymes produced from a selected strain of Aspergillus niger under solid state fermentation. The cellulase and xylanase enzymatic cocktail was characterized in terms of pH and temperature by using response surface methodology. Thermostability and kinetic parameters were also determined. The statistical analysis of pH and temperature effects on enzymatic activity showed a synergistic interaction of these two variables, thus enabling to find a pH and temperature range in which the enzymes have a higher activity. The results obtained allowed the construction of mathematical models used to predict endoglucanase, β-glucosidase and xylanase activities under different pH and temperature conditions. Optimum temperature values for all three enzymes were found to be in the range between 35°C and 60°C, and the optimum pH range was found between 4 and 5.5. The methodology employed here was very effective in estimating enzyme behavior under different process conditions.     

High performance liquid chromatography of integral glycoproteins of peripheral nerve myelin

Peripheral nerve myelin contains a large quantity of integral glycoproteins, such as PO and PASII protein. The present paper reports a fast and sensitive method for separation of these glycoproteins. High performance liquid chromatography (HPLC) with TSK-GEL 3000 SW column in the presence of sodium dodecyl sulfate (SDS) or lithium dodecyl sulfate (LDS) was used. Whereas the separation of PO and PASII was inadequate with low concentrations of the detergent, better separation profiles were obtained with high concentrations (1–2%) of the detergent in 0.1 M phosphate buffer. The two glycoproteins were able to be purified by rechromatography. High concentration of the detergent presumably diminished hydrophobic interaction between these glycoproteins. LSD-phosphate, SDS-lithium citrate or SDS-Tris buffer as an eluent was also compared with SDS-phosphate system. This method will be applicable to the detection and purification of proteins from myelin or other organelles.     

Enhanced cellulase production through random mutagenesis of Talaromyces pinophilus OPC4-1 and fermentation optimization

Reducing cellulase cost remains a major challenge for lignocellulose to fuel and chemical industries. In this study, mutants of a novel wild-type cellulolytic fungal strain Talaromyces pinophilus OPC4-1 were developed by consecutive UV irradiation, N-methyl-N`-nitro-N-nitrosoguanidine (NTG) and ethylmethane sulfonate (EMS) treatment. A potential mutant EMM was obtained and displayed enhanced cellulase production. Using Solka Floc cellulose as the substrate, through fed-batch fermentation, mutant strain T. pinophilus EMM generated crude enzymes with an FPase activity of 27.0 IU/mL and yield of 900 IU/g substrate. When corncob powder was used, strain EMM produced crude enzymes with an FPase activity of 7.3 IU/mL and yield of 243.3 IU/g substrate. In addition, EMM crude enzymes contained 29.2 and 16.3 IU/mL β-glucosidase on Solka Floc cellulose and corncob power, respectively. The crude enzymes consequently displayed strong biomass hydrolysis performance. For corncob hydrolysis, without supplement of any commercial enzymes, glucose yields of 591.7 and 548.6 mg/g biomass were obtained using enzymes produced from Solka Floc cellulose and corncob powder, respectively. It was 553.9 mg/g biomass using the commercial enzyme mixture of Celluclast 1.5 L and Novozyme 188. Strain T. pinophilus EMM was therefore a potential fungus for on-site enzyme production in biorefinery processes.     

Fine quantitative trait loci mapping of carbon and nitrogen metabolism enzyme activities and seedling biomass in the maize IBM mapping population

Understanding the genetic basis of nitrogen and carbon metabolism will accelerate the development of plant varieties with high yield and improved nitrogen use efficiency. A robotized platform was used to measure the activities of 10 enzymes from carbon and nitrogen metabolism in the maize (Zea mays) intermated B73 × Mo17 mapping population, which provides almost a 4-fold increase in genetic map distance compared with conventional mapping populations. Seedling/juvenile biomass was included to identify its genetic factors and relationships with enzyme activities. All 10 enzymes showed heritable variation in activity. There were strong positive correlations between activities of different enzymes, indicating that they are coregulated. Negative correlations were detected between biomass and the activity of six enzymes. In total, 73 significant quantitative trait loci (QTL) were found that influence the activity of these 10 enzymes and eight QTL that influence biomass. While some QTL were shared by different enzymes or biomass, we critically evaluated the probability that this may be fortuitous. All enzyme activity QTL were in trans to the known genomic locations of structural genes, except for single cis-QTL for nitrate reductase, Glu dehydrogenase, and shikimate dehydrogenase; the low frequency and low additive magnitude compared with trans-QTL indicate that cis-regulation is relatively unimportant versus trans-regulation. Two-gene epistatic interactions were identified for eight enzymes and for biomass, with three epistatic QTL being shared by two other traits; however, epistasis explained on average only 2.8% of the genetic variance. Overall, this study identifies more QTL at a higher resolution than previous studies of genetic variation in metabolism.     

Isolation and characterization of three autolytic enzymes associated with sporulation of Bacillus thuringiensis var. thuringiensis

Cells of Bacillus thuringiensis containing refractile spores autolyzed readily when suspended in buffer. The autolysate contained enzymes which lysed vegetative cell walls of the organism. Three enzymes were isolated from the autolysate, and each was purified approximately 30-fold. One enzyme, most active near pH 4.0, was found to be an N-acetylmuramidase. The other two enzymes exhibited pH optima at 8.5. One was stimulated by cobalt ions and the other was not. The cobalt-stimulated enzyme was shown to be an N-acetylmuramyl-l-alanine amidase. The cobalt insensitive enzyme exhibited both N-acetylmuramyl-l-alanine amidase and endopeptidase activity. The amidase activity may reflect incomplete separation of the cobalt-stimulated enzyme. The endopeptidase cleaved the peptide bond between l-alanine d-glutamic acid. A cell wall lytic endopeptidase with this specificity has not been previously reported. All three enzymes were extremely limited in the range of bacterial cell walls which they attacked. Except for cell walls of Micrococcus lysodeikticus, which were lysed by the muramidase, only cell walls of members of the genus Bacillus were attacked.     

Activity of human P450 2D6 in biphasic solvent systems

Several limitations have restricted the use of P450 enzymes in synthesis, including the narrow substrate specificity of some P450 isoforms, the need for a redox partner and an expensive cofactor, incompatibility with organic solvents, and poor stability. We previously demonstrated that the natural redox partner and cofactor of the promiscuous P450s 3A4 and 2D6 can be efficiently substituted with some cheap hydrogen peroxide donors or organic peroxides. We report here that P450 2D6 maintains as much as 76% of its activity when used in buffer/organic emulsions. Product formation in biphasic solvent systems is comparable whether the natural redox partner and cofactor are used, or a surrogate. As reported for other enzymes, a correlation is observed between the logP and the suitability of a solvent for enzymatic activity. Moreover, the utility of our system was established by demonstrating the transformation of a novel hydrophobic substrate, not modified by P450 2D6 in the absence of organic solvent.     

Intensity of mineralization processes in mountain lakes in NW Slovenia

The potential and actual intensity of mineralization in sediments of fourteen mountain lakes and one subalpine lake in NW Slovenia have been measured. Potential mineralization was measured as the intensity of the electron transport system (ETS) activity of microzoobenthos and microbial communities and the actual mineralization as the oxygen consumption of respiration processes, both measured at a standard temperature of 20°C. The lakes are of different trophic levels and some exhibit seasonal anoxia. All but one are hardwater lakes. Two layers of sediment cores from the deepest point of the lakes were analysed: a surface layer and one below 15 cm. Significant differences among different lakes in their ETS activity and oxygen consumption in the surface and lower layers of sediment were observed. ETS activities and oxygen consumption rates were higher in the surface layers of all the lakes. From the three investigated deterministic factors (temperature, lake depth and total phosphorus in the water column) on sedimentary metabolism ETS activity in the surface layer correlated significantly with total phosphorus and lake depth, but oxygen consumption rate showed a significant correlation only with total phosphorus. The relationship between oxygen consumption and ETS activity was also investigated. ETS activities correlated with oxygen consumption rates according to the equation of logR = 0.421^* logETS + 0.898 (r=0.82; n=30; p<0.001). The R/ETS ratio was lower at the sediment surface than in the layers deeper than 15 cm. It is concluded that ETS activity and oxygen consumption are good indicators of the intensity of the metabolic activity and mineralization in lake sediments. As the characteristics of lakes and some environmental factors influence the ETS activity and the oxygen consumption differently, the same R/ETS ratio should not be used as conversion factor in calculations for different lakes.