Trends and variability in spectral diffuse attenuation of coral reef waters

Coral Reefs - Knowledge of water clarity is an essential component of coral reef ecology. While qualitative trends are well known, there are currently few published records of...     

Spatial variability of sulfate reduction in a shallow aquifer

The distribution and metabolic activity of sulfate-reducing bacteria (SRB) in a shallow, suboxic aquifer were studied. A radioimaging technique was used to visualize and quantify the activity of sulfate reducers in sediments at a centimetre-level scale. The distribution of SRB metabolic activity was heterogeneous with areas showing little activity far outnumbering areas with high activity. Variation in sulfate-reducing activity was not statistically correlated with variation in depth, bacterial numbers, or the following sediment properties: sediment type (sand, peat or silt), grain size, permeability and hydraulic conductivity. Sulfate-reducing bacteria activity did vary significantly with sediment porosity (multivariate analysis, r = 0.48). We hypothesized that the small pore sizes associated with sediments with low porosity restricted the ability of SRB to grow to high numbers as well as their access to nutrients. To further explore the relationship between pore size and microbial metabolic activity, columns with varying pore diameters were constructed. Sulfate-reducing bacteria in the columns with the smallest pore diameters had the lowest rates of metabolism and SRB metabolic rates increased as the pore diameter increased. For the aquifer studied, sediment porosities and pore sizes were the main factor controlling SRB activity.     

Spatial and temporal variability of light attenuation in large rivers of the Amazon

The light field and its relationship with biogeochemical variables were investigated in the Solimões, Negro, Amazon, Madeira, Uatumã, Trombetas, and Tapajós Rivers. In high suspended sediment rivers, total suspended matter is the primary control on light attenuation (r = 0.8), with colored dissolved organic matter (CDOM) being secondary (r = ?0.6) due to scattering and absorption, respectively. Photosynthetically active radiation was the lowest (<100.0 μmol m^?2 s^?1 at the depth of half Z _1%) and was limited to depths of less than 1.0 m and confined to red light. In low suspended sediment rivers, CDOM is the primary control on light attenuation (r = 0.9). The concentrations of chlorophyll a (Chla) and CDOM cause variations among these rivers. High CDOM rivers, Negro and Uatumã, are depleted (<0.5% of incoming irradiance) of blue and green light at the depth of half Z _1%. The light spectra of low CDOM and higher Chla waters, such as the Tapajós, Uatumã, and Trombetas Rivers at rising water stage, are restricted to green and red wavelengths, and marked by high absorption at 620 and 670 nm, due to the presence of Cyanophyceae.     

Floristic changes in shallow soft waters i n relation to underlying environmental factors

SUMMARY 1. Historical and recent data on the occurrence of macrophytes in twenty-eight lentic soft waters in The Netherlands are summarized. These waters were, and a few still are, characterized by a submerged vegetation of isoetid plants. Changes in the species composition of macrophytes are visualized by means of multivariate analysis and by shifts in species-spectra.
2. Ordination of the available data shows that the pH, alkalinity, acidity, contents of heavy metals, dissolved organic matter and some important salts and nutrients in water and interstitial water are strongly related to the recent distribution of aquatic plants in waters, which were originally of low alkalinity. In addition, the available inorganic carbon and the redox potential in the sediment are also important environmental parameters in explaining differences in aquatic vegetation.
3. The recorded changes in the macrophyte species composition can be attributed to the effects of acidification and eutrophication. The most important, overall change is a reduction of the number of species.
4. Hydrology proves to be important in controlling the sensitivity of a body of water for acidifying deposition.     

Diel variation of zooplankton in the tropical coral-reef water of Tioman Island,Malaysia

Zooplankton was sampled at 3-h intervals for a 48-h period from a coral reef of Tioman Island, Malaysia. It was size-fractionated into three size classes: 100–200, 200–335, and >335 μm using different sieves with different mesh sizes. Total zooplankton (>100 μm) abundance and biomass in the water column were high later at night (0300 h), not just after sunset as previously described in other studies. Only the largest size-fraction (>335 μm) of zooplankton significantly differed in biomass and abundance between day and night. The increase in the large zooplankton later in the night is suggested to be caused by the advection of pelagic species into the reef. This work has provided a measurement of the variation of zooplankton community over coral reef that can exist on a scale of hours.     

The transport of fine-grained sediments in shallow waters

Modelling

The transport of fine-grained sediments in shallow waters     

The attenuation of ultraviolet and visible radiation in Dutch inland waters

The vertical attenuation coefficients (K _d) of downward ultraviolet (UV) and visible irradiance (PAR) were measured in 19 different inland waters in the Netherlands using a scanning spectroradiometer. Water chemistry variables such as dissolved organic carbon (DOC), absorbance of dissolved matter (a _d), chlorophyll-a, and particulate matter were measured to determine the relative contribution of dissolved and particulate components in explaining the variation in K _d. In addition to the field measurements, laboratory measurements were performed to test the relationships between water properties and light attenuation. The attenuation properties of Dutch inland waters vary. In most systems the penetration of UV-B radiation (280–320 nm) is limited to the upper decimetres. Lake Maarsseveen was the clearest waterbody in this study, with K _dUVB of 9.1 (m^–1). The DOC concentration had limited power in predicting UV attenuation in this study (r ²=0.33), because of the large differences in carbon-specific absorption. A _d300 was a much better predictor of UV attenuation (r ²=0.75). The relationships obtained in the laboratory experiments can be used to give a good prediction of in situ K _d values, based on 3 variables (chlorophyll-a, ash weight, and absorption of dissolved matter).     

A multichannel sensor for temperature measurements in shallow waters

A multichannel temperature sensor is presented; it is suitable for almost simultaneous measurements at various depths and time intervals. It allows automatic registration of smallscale time/depth variations of temperature in floating masses of filamentous algae and similar thermally stratified systems. An example is given by a 4-day record of the temperature regime in a floating mass ofOedogonium species in May.     

Spatial variability of soil fertility factors in the Xiangcheng tobacco planting region, China

It is essential to understand the spatial variability of soil properties in tobacco planting regions, so that the right decision can be made as to how many fertilizer rates are likely to be appropriated for the high-quality tobacco production. A total of 159 soil samples were taken from the surface soil (0-20cm) in the Xiangcheng tobacco planting fields, Henan Province, in April 2002 to examine the concentration of soil organic matter, pH, available N, available P, and available K. The spatial variability was evaluated using geostatistics and geographic information system (GIS) analyses. The results show that among those five soil fertility factors, the variation coefficient of soil pH was the smallest, while that of available P was the greatest, which resulted from different cultivation methods and uneven fertilization. Analysis of the isotropic variogram indicated that the soil pH, organic matter, and available P semivariogram were well described with spherical models, with the distance of spatial dependence being 21020, 19150, and 8460m, respectively, whereas the available N and available K semivariogram were well described with an exponential model, with the distance of spatial dependence being ranged from 7484 to 25320 m. Soil pH value was strongly spatially dependent with C0/sill being 0.1935, while the other four soil fertility factors were moderately spatially dependent with C0/sill ranging between 0.3528 to 0.5260. Through the Kriging analysis, the spatial distribution maps of soil properties were drawn using the arcview software. This study provides a scientific basis for field management, which targets soil quality improvement in the Xiangcheng tobacco planting region.     

Spatial variability of soil fertility factors in the Xiangcheng tobacco planting region, China

It is essential to understand the spatial variability of soil properties in tobacco planting regions, so that the right decision can be made as to how many fertilizer rates are likely to be appropriated for the highquality tobacco production. A total of 159 soil samples were taken from the surface soil (0-20 cm) in the Xiangcheng tobacco planting fields, Henan Province, in April 2002 to examine the concentration of soil organic matter, pH, available N, available P, and available K. The spatial variability was evaluated using geostatistics and geographic information system (GIS) analyses. The results show that among those five soil fertility factors, the variation coefficient of soil pH was the smallest, while that of available P was the greatest, which resulted from different cultivation methods and uneven fertilization. Analysis of the isotropic variogram indicated that the soil pH, organic matter, and available P semivariogram were well described with spherical models, with the distance of spatial dependence being 21020, 19150, and 8460 m, respectively, whereas the available N and available K semivariogram were well described with an exponential model, with the distance of spatial dependence being ranged from 7484 to 25320 m. Soil pH value was strongly spatially dependent with C0/sill being 0.1935, while the other four soil fertility factors were moderately spatially dependent with C0/sill ranging between 0.3528 to 0.5260. Through the Kriging analysis, the spatial distribution maps of soil properties were drawn using the arcview software. This study provides a scientific basis for field management, which targets soil quality improvement in the Xiangcheng tobacco planting region.     

The spectral distribution and attenuation of underwater irradiance in Tasmanian inland waters

SUMMARY. 1. Measurements were made of the attenuation and spectral distribution of downwelling and upwelling photosynthetically-available radiation (PAR) in all the principal types of natural waters found in Tasmania. 2. Most lakes in the State are clear and non-turbid, with water itself and the low concentrations of gilvin being the principal determinants of the green underwater light climate. Many others are deeply coloured by dissolved and colloidal organic material (gilvin, gelbstoff) which rapidly attenuates short wavelengths, specifying a shallow, predominantly red euphotic zone. 3. A spectrophotometric measure of colour, the absorption coefficient at 440 nm, is statistically related to measurements on the platinum scale with good precision. 4. Few Tasmanian lakes are turbid but in those that are the underwater light climate is almost identical to that of non-turbid, humic lakes. 5. Reflectance, R, varied with depth but not in the asymptotic way previously encountered. A linear relationship existed between the scattering coefficient, b, and nephelometric turbidity, but not at the approximate 1:1 ratio reported elsewhere. 6. Most Tasmanian lakes are oligotrophic or dystrophic and phytoplankton rarely influenced the underwater light field. 7. Seasonal variation in optical character is not great in natural lakes and their optical properties and light fields can be used typologically. 8. Simple and multiple regression analysis showed that Secchi depth was a poor predictor of euphotic depth but the optical properties and the underwater light field of inaccessible lakes could be reasonably predicted from laboratory measurements made on small water samples, using regressions developed for a wide range of lake types and by reference to the quantaradiometric scans of lakes with comparable optical properties. 9. An optical classification of Tasmanian lakes made by cluster analysis agreed reasonably well with one based on edaphic, vegetational and chemical criteria.     

Simulation of water colors in a shallow acidified lake, Lake Onneto, Japan, using colorimetric analysis and bio-optical modeling

Lake Onneto has unusually brilliant water colors, such as blue-green, green, and greenish yellow. We investigated the coloration mechanism in this lake by measuring the radiometric water color and inherent optical properties (IOPs), such as attenuation, absorption, and scattering coefficients of color-producing agents (CPAs) in the lake. The hue of the water body was determined using colorimetric analysis. In addition, the radiometric water color of the lake was simulated using bio-optical modeling. Results showed that the hues of the water body were different between two sampling stations (blue-green and green at 3.1 and 5.5 m of bottom depth, respectively). However, the total suspended solids (TSS) concentrations were almost identical between the two stations (0.47 and 0.42 mg l⁻¹, respectively). In addition, the attenuation and absorption coefficients showed that the CPAs in the water body were only inorganic suspended solids (ISS) more than 0.7 μm in diameter, and specific CPAs, such as dissolved mineral ions and aqueous colloids, were not observed in the lake. Simulation of the radiometric water color showed that the radiation around 600 nm of wavelength (yellow region) steeply increased with decreasing bottom depth, indicating that the water colors of Lake Onneto are strongly governed by the light reflection from yellowish bottom sediments.     

A simple and inexpensive trap-tube sampler for zooplankton collection in shallow waters

The paper describes a new type of zooplankton sampler, which combines the concepts of the Pennak core sampler and the Schindler-Patalas plankton trap. The new sampler, called Trap Tube Sampler, consists of a PVC water pipe (1.5–2.0 m, long; 10 cm diameter) provided, at the bottom end, of a filtering unit and closing mechanism which alternatively closes the mouth of the tube and the mouth of the filtering unit. The new device is particularly suitable for collecting samples from the entire water column in shallow vegetated water bodies, fish ponds and mesocosm tanks.     

Spatial and temporal variability in a butterfly population

Summary The dynamics of a butterfly (Plebejus argus) population were analysed at two levels, (i) the population as a whole and (ii) sections within the population. Some sections of the population fluctuated out of synchrony with others, such that the variability [SD Log(Density+1)] shown by the population as a whole was less than the variability shown by each part of the population — overall temporal variability was dampened by spatial asynchrony. Since observed population variability depends on the spatial scale that is sampled, comparisons of population variability among taxa should be carried out only with caution. Implications for island biogeography and conservation biology are discussed.     

Spatial and temporal variability in the net primary production of grassland in China and its relation to climate factors

As an important component of the terrestrial carbon (C) cycle, variability in net primary productivity (NPP) plays a crucial role in the C input and accumulation in grasslands system. In this study, the spatial and temporal variability of grassland NPP in China during 2001–2010 and its relation to climate factors were analyzed by using a modified model of Carnegie–Ames–Stanford Approach based on the Comprehensive and Sequential Classification System. The results show that monthly grassland NPP increases from January to July. While the seasonal variability of NPP indicates peak productivity in summer. Annual mean grassland NPP follows a significant increasing trend with fluctuation from 2001 to 2010. The spatial pattern of grassland NPP shows increasing gradients from the west to the east and from the north to the south of China. Annual NPP differs significantly among different grassland types, with the highest NPP in the grassland distributed in sub-tropical perhumid evergreen broad leaved forest and tropical-perhumid rain forest. Time-lag correlation analysis at the monthly scale shows that grassland NPP responded more rapidly to changes in temperature than to precipitation. Among the climate factors, grassland NPP shows the strongest correlation at 1-month lag with moisture index K. There is a significant positive correlation between seasonal NPP and K. The seasonal NPP is significantly correlated with >0 °C annual cumulative temperature. The highest and the lowest NPP sensitivity to precipitation, K, and temperature were observed in the grassland distributed in tropical forest and semi-desert. The results indicate a complex mechanism of climate factors that control grassland C sequestration in terrestrial ecosystems.     

Spatial pattern of diversity in a tropical rain forest in Malaysia

The diversity of trees (species richness, abundance and Shannon diversity) in a tropical rain forest of Malaysia has been studied from the point of view of its spatial organization in order to formulate hypotheses about the origin of the observed spatial patterns. The question that motivated this study is whether tropical forests communities are in a state of equilibrium or non-equilibrium. Three aspects have been examined: (1) changes in diversity were studied with respect to sampling area and sampling designs. A minimum area of 5–10 ha is recommended by the species–area curves, while 2–5 ha seem appropriate based on the Shannon diversity–area curves. Different sampling designs significantly affect the species–area curves. The power function, which can be derived under the equilibrium assumption, is not appropriate to fit the observed diversity–area curves. (2) The spatial features of diversity variables were then studied. Variograms showed that there are dominant short-range effects (around 150 m), obvious anisotropic distribution, and high random variation in the diversity data. (3) Partitioning the variation of the diversity measures into environmental (topographic) and spatial components indicated that the spatial organisation of that community was mostly unpredictable. There may be many processes controlling the formation of the spatial patterns in the tropical rain forest. Unidentified causes, affecting mainly the small-scale processes (<20 m), seem responsible for the large amount of undetermined variation in the diversity data sets. The study suggests that the Pasoh forest of Malaysia may not be in a state of equilibrium.     

Spatial distribution and seasonal changes in methylmercury concentrations in shallow lakes

The environmental factors governing the distribution and behaviour of total and methylmercury within mercury contaminated shallow lakes, associated with the River Yare, Norfolk, UK, have been assessed in situ through the use of sediment cores. These were analysed for microbial and chemical changes on both a temporal and spatial scale. The distribution of total mercury proved to be site dependent and related to the hydrology, sediment transport dynamics, the degree of sediment disturbance and distance from the contamination source. The core profiles revealed a subsurface peak in total mercury with maximum concentrations residing at depths of 12 and 36 cm, depending upon location, with enrichment extending down to depths in excess of 88 cm. This vertical distribution was deemed to reflect historical emission in the late 1960s and early 1970s rather than post depositional migration effects. The distribution of methylmercury was distinct from that of its inorganic counterpart since it also displayed temporal variability with highest concentrations occurring in the spring and summer. Maximum concentrations also prevailed in the uppermost 12 cm of sediment, with peak loadings at or just below the sediment/water interface and detectable levels being restricted to the upper 36 cm. The temporal and spatial behaviour of methylmercury appeared to reflect variations in redox potential, the availability of the Hg²⁺ ion and the nature of microbial populations.     

Spatial and temporal distribution of fish and zooplankton in a shallow lake

Summary 1. We performed both a large- and a small-scale echo sounding study on the spatial and temporal distribution of fish (mainly roach, Rutilus rutilus and perch, Perca fluviatlis ), as well as a small-scale study of zooplankton distribution in the small, shallow and eutrophic Lake Hanebjerg in Denmark. In the small-scale study, sampling was conducted in open water as well as in the edge zone immediately outside two different types of vegetation.
2. Fish daytime abundances differed between the northern and the southern parts of the lake and, on a small scale, small fish aggregated in the edge zones during day, preferably outside dense emergent vegetation. Copepods avoided emergent vegetation, while cladocerans showed no habitat preference. Both small fish and cladoceran numbers were found to be higher during night than day.
3. The relative abundance (number per sample) of cladocerans in the edge zone immediately outside vegetation was negatively correlated with the relative abundance of fish in that zone. There was no correlation between cladoceran and fish abundance in open water, or between the relative abundance of copepods and fish.
4. The presence of pelagic piscivores in combination with avoidance behaviour of both fish and zooplankton is a likely explanation for the observed distribution of small fish and cladocerans in Lake Hanebjerg. Both small- and large-scale distribution patterns may be dependent on the type and distribution of complex structure in the lake. Even in a small lake, large-scale patterns may affect the interpretation of small-scale data.