Morphological and molecular characterization of <Emphasis Type="Italic">Mariannaea aquaticola</Emphasis> sp. nov. collected from freshwater habitats

Mariannaea aquaticola sp. nov. is described, illustrated, and compared with closely related taxa. Phylogenetic analysis of rDNA ITS and 28S sequences show that Mariannaea aquaticola has affinity with Nectriaceae, which is in agreement with other Mariannaea species. Other morphologically similar genera such as Verticillium and Clonostachys are shown to be phylogenetically distant to Mariannaea. The generic concept of Mariannaea is discussed, and the affinity to Nectriaceous teleomorphs is suggested as additional generic character. A key to Mariannaea species is provided.     

CYTOGENETIC STUDIES OF CARTHAMUS DIVARICATUS WITH ELEVEN PAIRS OF CHROMOSOMES AND ITS RELATIONSHIP TO OTHER CARTHAMUS SPECIES (COMPOSITAE)

Carthamus divaricatus (Beg. et Vacc.) Pamp., found only in Libya, has 11 pairs of chromosomes, a new chromosome number in the genus. The species is distinct morphologically. It has yellow, purple, and white corollas, yellow pollen, dark-purple striped anthers, horizontal branches, and strongly divaricate outer involucral bracts. The terminal portion of the middle involucral bracts is dentate and reddish brown. It is self-incompatible. Meiosis is regular in the different corolla-color types of C. divaricatus and their intraspecific hybrids. C. divaricatus was crossed to six species with n = 12, to three species with n = 10, to C. lanatus with n = 22, and to two species with n = 32 chromosomes. The morphological characteristics and cross-ability of the parental species plus the pollen viability, seed-set, and meiotic behavior of the hybrids involving C. divaricatus and other Carthamus species indicated that C. divaricatus is very closely related to species with n = 10, closely related to C. lanatus with n = 22, and less closely related to C. tinctorius with n = 12 chromosomes. C. divaricatus seems to be distantly related to C. nitidus (n = 12). It is proposed that C. divaricatus be included provisionally with 10-chromosome species in Section II. Alternative hypotheses for the development of the three basic chromosome numbers are discussed.     

Taxonomic notes on African Orthotrichaceae 3. New synonymy in Madagascan Macromitrium

Examination of type material of Macromitrium taxa described from Madagascar has unveiled three names to be placed in synonymy. Macromitrium nanothecium var. sublaeve Thér. was found to be conspecific with Macromitrium fimbriatum (P.Beauv.) Schwägr.; Macromitrium ancistrophyllum Cardot is placed in synonymy with M. nanothecium Cardot and Macromitrium semipapillosum Thér. & P.de la Varde is placed in synonymy with Macromitrium calocalyx Müll.Hal. Lectotypification is effected for four taxa within the genus. A range extension is reported for M. nanothecium, which is recorded here as new to Tanzania.     

Effects of microbial floras on the distributions of five domestic Drosophila species across fruit resources

Summary The distributions of five Drosophila species and four components of the microflora have been compared across a total of 48 traps baited with four different fruit and vegetable substrates in two domestic compost heaps in Canberra (Australia). Large and consistent differences are found, both among the Drosophila and among the microbial classes, in their distributions across traps baited with different substrates. Moreover the distribution of each Drosophila species shows a unique set of strong associations with the microbial distributions. Thus the distributions of both D. simulans and D. melanogaster are found to be strongly negatively correlated with the abundance of bacteria while D. simulans is also strongly positively correlated with the titre of fermenter yeasts. D. immigrans is strongly positively correlated both with bacteria and with non-fermenter yeasts. D. hydei is positively correlated with nonfermentery yeasts and D. busckii is negatively correlated with fermenter yeasts. Moulds are the only microbial class not consistently associated with the distribution of any of the Drosophila species. The correlations with the other microbial classes are sufficient to explain the majority of the abundance differences of the Drosophila species among the trap types. It is therefore proposed that the clear partitioning of the fruit resources by the Drosophila is due to their differing primary interactions with the microflora.     

Identification and typification of Nepenthes blancoi,with N. abalata sp. nov. from the western Visayas,Philippines

Nepenthes blancoi Bl. is neotypified on material conspecific with N. alata Blanco. Material previously associated with N. blancoi is described as N. abalata Jebb & Cheek sp. nov. This is a grassland species seemingly related to N. philippinensis Macfarl. but with similarities to the grassland species of Indo‐China. Its conservation status is assessed as ‘Critically Endangered’ (CR).     

Phylogenetic Framework for Trema (Celtidaceae)

We used ITS and trnL sequence data, analyzed separately and combined by MP, to explore species relationships and concepts in Trema (Celtidaceae), a pantropical genus of pioneer trees. Whether Trema is monophyletic or includes Parasponia is still unresolved. Three clades within Trema received moderate to high support, one from the New World and two from the Old World, but their relationships were not resolved. In the New World, specimens of T. micrantha formed two groups consistent with endocarp morphology. Group I, with smaller brown endocarps, is a highly supported clade sister to T. lamarckiana. Group II, with larger black endocarps, is poorly resolved with several subclades, including the highly supported T. integerrima clade. Both Old World clades contain Asian and African species, with three or more species in each region. Trema orientalis is not monophyletic: specimens from Africa formed a highly supported clade sister to T. africana, while those from Asia were sister to T. aspera from Australia.     

Rotifera from north and northeast Anatolia (Turkey)

Samples from 21 freshwater sites in Turkey yielded 91 different species of Rotifera, 42 of which are new to the Turkish fauna. Lepadella costatoides n. sp. is described and L. costata Wulfert is redescribed. L. christineae Koste is synonymised with L. quinquecostata (Lucks). Remarks on the intraspecific variability of some species of Lecane are given. L. pomiformis Edmondson is added to the synonymy of L. pyriformis (Daday). The synonymy of the latter with L. paraclosterocerca Pennak is confirmed.     

Processing by rhomboid protease is required for Providencia stuartii TatA to interact with TatC and to form functional homo-oligomeric complexes

The twin arginine transport (Tat) system transports folded proteins across the prokaryotic cytoplasmic membrane and the plant thylakoid membrane. In Escherichia coli three membrane proteins, TatA, TatB and TatC, are essential components of the machinery. TatA from Providencia stuartii is homologous to E. coli TatA but is synthesized as an inactive pre‐protein with an N‐terminal extension of eight amino acids. Removal of this extension by the rhomboid protease AarA is required to activate P. stuartii TatA. Here we show that P. stuartii TatA can functionally substitute for E. coli TatA provided that the E. coli homologue of AarA, GlpG, is present. The oligomerization state of the P. stuartii TatA pro‐protein was compared with that of the proteolytically activated protein and with E. coli TatA. The pro‐protein still formed small homo‐oligomers but cannot form large TatBC‐dependent assemblies. In the absence of TatB, E. coli TatA or the processed form of P. stuartii TatA form a complex with TatC. However, this complex is not observed with the pro‐form of P. stuartii TatA. Taken together our results suggest that the P. stuartii TatA pro‐protein is inactive because it is unable to interact with TatC and cannot form the large TatA complexes required for transport.     

A convolute diversity of the Auriculariales (Agaricomycetes,Basidiomycota) with sphaeropedunculate basidia

Morphological and DNA data show that effused representatives of the Auriculariales (Basidiomycota) with sphaeropedunculate basidia belong to eleven genera of which seven are dealt with in this study. Among them, Myxarium is the largest genus containing 21 accepted species of which nine are reintroduced below and five are described as new. Protodontia is limited to three species only, P. subgelatinosa (the generic type) and two newly described species from Africa. Protoacia is a new monotypic genus for P. delicata, sp. nov., widely distributed on coniferous hosts in Eurasia. Myxariellum is erected for two new species with smooth hymenophore from northwestern North America while Gelacantha is introduced for G. pura, a new species with hydnoid hymenophore from Caucasus. Our data do not confirm the present synonymy of Sebacina sphaerospora with Tremella glaira, and these species are placed in two separate genera – Hydrophana, gen. nov., and Ofella, gen. nov., respectively. A key to European Myxarium and similar‐looking species is included.     

Lavinipes Cheminii Ichnogen., Ichnosp. nov., A Possible Sauropodomorph Track from the Lower Jurassic of the Italian Alps

A new ichnotaxon is described from the Lower Jurassic (Upper Hettangian-Lower Sinemurian) carbonate tidal flats on the central-eastern Italian Alps. The narrow-gauge trackway is that of a large quadrupedal dinosaur. The pes is functionally tetradactyl with three rounded antero-medially directed digits, and the manus is pentadactyl. This quadrupedal form is close to Otozoum and Pseudotetrasauropus jaquesi both traditionally related to sauropodomorph trackmakers. The similarity with Otozoum is so marked that Lavinipes and Otozoum could be cogeneric. But the overall evidence today is that the Otozoum trackmaker was generally bipedal, whereas the trackmaker of L. cheminii is fully quadrupedal. The manual prints of L. cheminii show five short clawless digits and are different from the tetradactyl slender toed manual prints of Otozoum. The possible sauropodomorph affinity of the L. cheminii trackmaker is here discussed with an attempt to a revision of the Late Triassic-Jurassic tracks which have been traditionally related to sauropod and prosauropod.     

Properties and Application of the Location-Test V (n,k)

The present paper is concerned with the properties of a test statistic V(n, k) to test location differences in the one-sample case with known hypothetical distribution G(x). The test is similar to the WILCOXON two-sample statistic after replacement of the second sample by quantiles of the hypothetical distribution. A comparison with the exact distribution of V(n, k) shows that an approximation by means of the normal distribution provides good results even for small sample sizes. The V-test is unbiased against one-tailed alternatives and it is consistent with a restriction which is hardly relevant in practical applications. With regard to the application we are interested especially in the power and robustness against extreme observations for small sample size n. It is shown that in a normal distribution with known standard deviation V(n, k) is more powerful than STUDENT's t for small n and more robust in the sense considered here. The test statistic is based on grouping of the observations into classes of equal expected frequency. A generalization to arbitrary classes provides an essential extension of applicability such as to discrete distributions and to situations where only relative frequencies of G(x) in fixed classes are known.     

Systematics and phylogeny of Parapholidoptera (Orthoptera: Tettigoniidae: Tettigoniinae)

Genus Parapholidoptera is revised and three species, P. yoruka sp.n., P. bolkarensis sp.n. and P. salmani sp.n., are described. Parapholidoptera delineata Stolyarov is placed in synonymy with P. ziganensis Karaba?. Parapholidoptera bodenheimeri Karaba? and P. distincta bodenheimeri Karaba? are placed in synonymy with P. distincta (Uvarov). Parapholidoptera flexuosa Karaba?, previously a subspecies of P. castaneoviridis (Brunner von Wattenwyl), is recognized as a separate species. A key to world species is provided. Cladistic analysis revealed the monophyly of the genus with two major clades. A short account of distribution is presented.     

Hyaloscyphaceae in Japan (6): the genus Hyphodiscus in Japan and its anamorph Catenulifera gen. nov.

Three Hyphodiscus species are described and illustrated: Hyphodiscus otanii sp. nov., Hyphodiscus hymeniophilus, and H. theiodeus, which is new to Japan. Culture studies revealed Phialophora-like anamorphs. Catenulifera gen. nov. is proposed for the anamorph of Hyphodiscus. The history of the genus is reviewed. Hyphodiscus can be delimited to members with gelatinized excipulum, Cistella-like hairs with more coarse granulation, small asci, ascospores with conspicuous globules, cylindrical, flexuous paraphyses, and a Catenulifera anamorph. Received: September 6, 2001 / Accepted: October 4, 2001     

Phylogenetic relationships of Chinese <Emphasis Type="Italic">Adiantum</Emphasis> based on five plastid markers

Adiantum consists of about 150–200 species mostly with a pantropical distribution, yet the classifications of Adiantum have been based primarily on regional studies. Confounding the clarity of reconstructing the evolutionary history of Adiantum is that previous molecular phylogenetic studies suggest that a separate and distinctive clade, the vittarioids, may be derived from within Adiantum. Five plastid markers (atpA, atpB, rbcL, trnL-F and rps4-trnS) are employed to assess the monophyly of Adiantum, and construct the molecular phylogeny of Chinese Adiantum. Our analyses support the monophyly of Adiantum. All temperate Adiantum species form a clade nested within the pantropical grade, suggesting a tropical origin of Adiantum. Six main clades are supported within Chinese Adiantum, which are only partially consistent with Lin’s classification of the genus. Series Caudata is polyphyletic with series Gravesiana nested within one subgroup of series Caudata. The prolonged whip-like stolon at the apex of the fronds is the defining character for series Caudata, but it may have evolved multiple times. Adiantum reniforme with the simple fronds is sister to series Venusta, which has a decompound lamina with many flabellate to cuneate segments. Series Veneri-capilliformia is not monophyletic, with A. capillus-veneris sister to series Flabellulata except for A. diaphanum, and A. edentulum sister to series Pedata. Series Flabellulata is biphyletic with A. diaphanum nested within the pantropical grade. The phylogeny suggests that convergent evolution in frond architecture has occurred in Adiantum.     

A new species and three new combinations in Cyphellophora, with a note on the taxonomic affinities of the genus, and its relation to Kumbhamaya and Pseudomicrodochium.

Cyphellophora guyanensis sp. nov., isolated from leaf litter in French Guyana, is described and illustrated. This fungus is characterized by ampulliform to flask-shaped phialides, with a conspicuous, funnel-shaped collarette, and nearly straight to falcate or slightly sigmoid, (2−)3–6 septate conidia. Cyphellophora guyanensis is compared to the other Cyphellophora species, and the latter genus is compared to Kumbhamaya and Pseudomicrodochium. Kumbhamaya indica, P. fusarioides, and P. suttonii are transferred to Cyphellophora. The phylogenetic relationships of Cyphellophora with other genera of ascomycetes and related mitosporic fungi were inferred from the analysis of the partial nuclear ribosomal DNA SSU sequences data. The analysis supports a placement of Cyphellophora in Chaetothyriales, and probably in the Herpotrichiellaceae This revised version was published online in August 2006 with corrections to the Cover Date.     

The Estimation of a Multivariate Fitness Function from Several Samples Taken from a Population

The situation is considered where the multivariate distribution of certain variables X₁, X₂, …, X_p is changing with time in a population because natural selection related to the X's is taking place. It is assumed that random samples taken from the population at times t₁, t₂, …, t_s are available and it is desirable to estimate the fitness function w_t(x₁, x₂,…,x_p) which shows how the number of individuals with X_i = x_i, i = 1, 2, …, p at time t is related to the number of individuals with the same X values at time zero. Tests for population changes are discussed and indices of the selection on the population dispersion and the population mean are proposed. The situation with a multivariate normal distribution is considered as a special case. A maximum likelihood method that can be applied with any form of population distribution is proposed for estimating w_t. The methods discussed in the paper are illustrated with data on four dimensions of male Egyptian skulls covering a time span from about 4500 B.C. to about 300 A.D. In this case there seems to have been very little selection on the population dispersion but considerable selection on means.     

Lophodermium pini-mugonis sp. nov. on needles of Pinus mugo from the Alps based on morphological and molecular data

Lophodermium pini-mugonis, collected on needles of Pinus mugo from German Alps, is described as a species new to science. It is characterized by subcuticular ascomata with a wrinkled surface and a somewhat untidy outline, a complex structure of lip cells, and ellipsoidal conidia. An analysis of the internal transcribed spaces of rDNA showed that Lophodermium pini-mugonis is, sister to Lophodermium autumnale and distantly related to other Lophodermium species on pines. The hypothesis of cospeciation of Lophodermium species with members of the Pinaceae is discussed.     

COMPARATIVE CYTOLOGY OF ULOTHRIX AND STIGEOCLONIUM1

This investigation describes the cytology of the ulotrichalean genera Ulothrix and Stigeoclonium. Cellular organization is similar to the degree that interphase cells of the 2 genera cannot be distinguished with certainly. In Stigeoclonium, the nuclear envelope becomes disrupted at the end of prophase, and centrioles enter the nucleoplasm. At metaphase the nuclear envelope is again intact, and some of the spindle tubules appear to be contiguous with the nuclear envelope. The spindle in Ulothrix is essentially open with, no attachment of spindle tubules to the nuclear envelope and with, centrioles on the spindle-cytoplasm interface at the spindle poles. Spindle poles are blunt in Stigeoclonium and pointed in Ulothrix. Cytokinesis is by cell plate formation in both genera, but there is no phragmoplast.