Characterization of organic matter in a forest soil of coastal British Columbia by NMR and pyrolysis-field ionization mass spectrometry

Organic matter in the soil profile under a young Douglas-fir stand in coastal British Columbia was characterized by examining intact samples of fresh litterfall and organic horizons (LF, H), and fractions (floatables, humic acid [HA], fulvic acid [FA], humin [HU]) from the three mineral horizons (Ae, Bm, BC). Some 30–40% of the carbon in the mineral horizons was found in poorly-decomposed plant material floatable in water, a fraction whose characteristics changed little with depth, and which contained over 1% Fe. The proportion of soil C in HA plus FA was approximately 8%, but the ratio of C in FA/HA increased with depth. Solid-state ¹³C NMR spectra of litterfall, LH and H samples showed effects of decomposition, in particular a decrease in 0-alkyl C from litterfall to LH to H, and degradation of resolution from LF to H. For the mineral soil fractions, both floatables and de-ashed HU (HU_d prepared by HCl/HF treatment) indicated high levels of the original plant biopolymers, including a large alkyl component. Solution ¹³C spectra of the HAs from mineral horizons showed little difference with depth, except that peaks due to lignin were more pronounced for the Bm HA. The NMR spectra of FAs were high in 0-alkyl and carboxyl C. Pyrolysis-field ionization mass spectrometry confirmed and extended the results from NMR and chemical analyses, in particular demonstrating the accumulation of suberin in some fractions and the leaching and decomposition of lignin components with increasing depth in the mineral horizons. The general features of the HA, FA and HU_d from this forest soil, and the effects of decomposition and pedogenesis were similar to those widely found for agricultural and forest soils. However, the accumulation of suberin, and the leaching and decomposition of lignin are particularly associated with forest soils. The low proportion of soil C in HA and FA, and the high proportion in poorly decomposed, iron-rich plant fragments suggest that decomposition is somewhat limited at this site, which is classified as having low fertility. The high accumulations of alkyl C from suberin may also indicate, or contribute to inhibition of decomposition.     

The influence of topography on the nature of humic substances in soil organic matter at a site in the Atlantic Coastal Plain of South Carolina

The effect of topography on the nature of humic substances, isolated as water soluble organic carbon (WSOC), fulvic acid (FA), and humic acid (HA) was evaluated by comparing relative proportion and chemical characteristics of these fractions in upland and bottomland Coastal Plain soils in South Carolina. The fractions were characterized by elemental analysis and¹³C cross-polarization magic angle spinning nuclear magnetic resonance (CPMAS NMR) spectroscopy. The majority of humic substances occur as humic acids, with bottomland soils having higher HA/FA ratios when compared to upland soils. We found no significant differences between upland and bottomland humic substances with respect to yields of WSOC and fulvic acids, and in the C and N content of humic and fulvic acids. Carbon-13 CPMAS NMR spectroscopy revealed that the WSOC and fulvic acid fractions were composed largely of O-alkyl-C structures with bottomland soils having higher amounts of these groups. Humic acid C distribution was similar between upland and bottomland soils and was largely composed of aromatic groups. Our results demonstrate that topography influences the formation of humic acid and the structural and chemical properties of the various humic fractions.requests for offprints     

Snow vole (Chionomys nivalis Martins) affects the redistribution of soil organic matter and hormone‐like activity in the alpine ecosystem: ecological implications

In alpine environments, colonies of snow vole (Chionomys nivalis Martins) cause strong pedoturbation, which may affect humification process and soil organic matter (SOM) cycling, with repercussions on the hormone‐like activity of organics. We investigated the effect of snow vole pedoturbation on the chemical and spectroscopic features of soil organic fractions, and the potential hormone‐like activity of humic and fulvic acids (HA, FA). The study site was located on the high‐mountain environment of the Majella massif (central Italy). Pedoturbated and regular soils were morphologically described and characterized for pH and content of total organic carbon, total extractable carbon, HA, and FA. Both HA and FA were extracted and investigated using attenuated total reflectance/Fourier transform infrared (ATR/FTIR), nuclear magnetic resonance with high‐resolution magic angle spinning (HRMAS‐NMR), and ¹H‐¹³C heteronuclear single quantum coherence (HSQC). HA and FA were also tested for their auxin‐like and gibberellin‐like activities. Results provide evidences that bioturbated and regular soils contain a poorly decomposed SOM, but HA and FA with a well‐defined molecular structure. The HA and FA from both bioturbated and regular soils show a hormone‐like activity with a different allocation along the soil profile. In the regular soil, the highest auxin‐like activity was shown by HA and FA from Oe1 horizon, while gibberellin‐like activity was expressed by FA from Oe2 horizon. Burrowing activity determines a redistribution of organics throughout the profile with a relatively high auxin‐like activity in the FA from straw tunnel wall (STW) and gibberellin‐like activity in the HA from vole feces (VF). The relative high presence of carboxylic acids, amides, proteins, and amino acids in the FA from STW and the aromatic moieties in the HA from VF put evidences for their different behavior. The fact that snow vole activity has modified the chemical and biological properties of SOM in these soils otherwise considered governed only by low temperature has important ecological implications such as the preservation of soil fertility and vegetal biodiversity.     

Effects of organic acid fractions extracted from Eucalyptus camaldulensis leaves on root elongation of maize (Zea mays) in the presence and absence of aluminium

Complexes of aluminium (Al) with organic ligands are believed to represent an important detoxification mechanism in acid soils. However, relatively little is known about the particular ligands produced by decomposing vegetation or about their effects on plant growth in the presence or absence of toxic Al. This paper reports an experiment on the effects of decomposition products of Eucalyptus camaldulensis leaves on the root elongation of maize (Zea mays) cv. DK687 in the presence or absence of Al. The static solution culture experiment used fulvic acid (FA) and humic acid (HA), extracted from E. camaldulensis leaves, at three nominal concentrations, viz. 40, 120 and 360 mg C L^-1, replicated 4 times in the presence and absence of 30 µM Al. In the absence of Al, root elongation was increased by 30% by HA at 40 mg C L^-1 and by 36% by FA at 120 mg C L^-1. In the presence of 30 µM Al, the effects of toxic Al on root elongation were negated by FA and HA at all concentrations. Aluminium was totally complexed in all treatments except FA at 40 mg C L^-1 in which treatment only 2.7 µM Al was present in the monomeric form. The E. camaldulensis FA and HA at concentrations of 40 and 120 mg C L^-1, either in the presence or absence of Al, stimulated maize root elongation. Aluminium was strongly complexed by the E. camaldulensis FA and HA. The present results, in which FA and HA alleviated Al toxicity limitations on root elongation of maize, are relevant to the protection afforded to plant growth in acid soils amended with organic materials. They highlight the need to focus more on the role of FA and HA.     

Interactions of Cu (II) and Fe (III) with mangal humic substances studied by synchronous fluorescence spectroscopy and potentiometric titration

Humic (HA) and fulvic (FA) acids isolated from mangrove sediments of Sundarban, the largest delta on earth in the estuarine phase of the river Ganges, were studied and attempts were made to characterize their binding sites by quenching of Synchronous fluorescence (SyF) bands with Fe (III) and Cu (II). A modified Stern-Volmer relationship applicable for static quenching was applied for the determination of conditional stability constants and the data were compared with those determined by potentiometric titration. In the excited state HA and FA showed different acidity constant compared to the ground state. Values of the conditional stability constant (log K_c) for Fe (III) and Cu (II) indicated that binding sites were bidentate in nature. FA were better chelators than the HA fractions. High energy binding sites of both FA & HA were occupied by Fe(III) and the low energy binding sites, mainly responsible for mobilization and immobilization of metal, were occupied by Cu(II).     

Biogeochemistry of terrestrial soils as influenced by short-term flooding

Many terrestrial soils in the US Midwest are temporally flooded during the spring. The effects of short-term flooding on biogeochemical processes that occur in these soils are not fully understood and are the subject of this study. To evaluate these processes we investigated the redox-induced changes in the soil solution for three-cultivated and three-uncultivated/forest soils with different organic matter concentrations. The soils were flooded for 1, 3, 7, and 14-days under anoxic conditions in a biogeochemical reactor. Samples were analyzed for Eh; pH; NO₃ ^?; NH₄ ⁺; total dissolved Mn and Fe; soluble P; dissolved organic and inorganic carbon (DOC–DIC); and evolved CO₂. We found strongly contrasting responses of the terrestrial soils to flooding. Reducing conditions were established quickly in the uncultivated and more slowly in the cultivated soils. Concomitant changes in pH were higher for the uncultivated soils. The uncultivated soils showed a higher increase in the amount of NH₄ ⁺, P, Fe, Mn than the cultivated soils over the 14-day incubation. The total amount of carbon decomposed was much greater for the uncultivated soils with approximately 900 μg C (CO₂ + DOC + DIC) decomposed per gram of soil compared to a total decomposition of 240 μg C g _soil ^?1 for the cultivated soils indicating differences in the type of carbon decomposed. The rapid onset of reducing conditions for the uncultivated soils is attributed to a reactive carbon component that is either absent or occluded in the cultivated soils. This study demonstrates that the biogeochemically-induced changes in carbon dynamics in terrestrial soils are strongly influenced by short-term flooding and the history of soil management.     

Comparison of nifH Gene Pools in Soils and Soil Microenvironments with Contrasting Properties

The similarities and differences in the structures of the nifH gene pools of six different soils (Montrond, LCSA-p, Vernon, Dombes, LCSA-c, and Thysse Kaymor) and five soil fractions extracted from LCSA-c were studied. Bacterial DNA was directly extracted from the soils, and a region of the nifH gene was amplified by PCR and analyzed by restriction. Soils were selected on the basis of differences in soil management, plant cover, and major physicochemical properties. Microenvironments differed on the basis of the sizes of the constituent particles and the organic carbon and clay contents. Restriction profiles were subjected to principal-component analysis. We showed that the composition of the diazotrophic communities varied both on a large scale (among soils) and on a microscale (among microenvironments in LCSA-c soil). Soil management seemed to be the major parameter influencing differences in the nifH gene pool structure among soils by controlling inorganic nitrogen content and its variation. However, physicochemical parameters (texture and total C and N contents) were found to correlate with differences among nifH gene pools on a microscale. We hypothesize that the observed nifH genetic structures resulted from the adaptation to fluctuating conditions (cultivated soil, forest soil, coarse fractions) or constant conditions (permanent pasture soil, fine fractions). We attempted to identify a specific band within the profile of the clay fraction by cloning and sequencing it and comparing it with the gene databases. Unexpectedly, the nifH sequences of the dominant bacteria were most similar to sequences of unidentified marine eubacteria.     

Characterizing humic substances from estuarine soils and sediments by excitation-emission matrix spectroscopy and parallel factor analysis

The determination of optical properties of organic matter using spectroscopic techniques is a powerful tool for the characterization of humic substances (HS) in soils and sediments because of sensitivity, specificity and sample throughput. However, basic spectroscopic techniques have practical limitations because of the similarity in the optical properties of many HS. To improve resolution, the combination of excitation-emission matrix (EEM) fluorescence and parallel factor analysis (PARAFAC) was applied for characterizing fulvic acid (FA) and humic acid (HA) fractions from soils and sediments of two estuarine environments in Spain. Five fluorescent components were identified by EEM-PARAFAC and were found in both FA and HA fractions, consistent with the new paradigm of HS as supramolecular associations as well as the ubiquity of the HS components in the environment. Their contribution was, however, different between the FA and HA fractions. Two different, humic-like, fluorescent components were representative of FA and HA fractions, respectively. The spectral characteristics of these components were similar to previously reported PARAFAC components in dissolved organic matter (DOM) in a wide range of environments, suggesting their applicability in assessing OM quality and environmental dynamics. A microbial humic-like component was much more abundant in FA than in HA fractions. Furthermore, principal component analysis clarified that the two identified protein-like components, were enriched in sediment HA compared to soil HA, suggesting a larger contribution of refractory algaenan in sediment HA. The results of the present study demonstrate that EEM-PARAFAC is a useful technique for the biogeochemical characterization of soil and sedimentary HS.     

岩溶石漠化区不同植被恢复模式土壤无机磷形态特征及影响因素

为分析岩溶石漠化区不同植被恢复模式土壤无机磷的形态特征,评价植被恢复的土壤供磷潜力,阐明有机碳及钙素在无机磷形态转化中的作用,选取研究区内8种有代表性的样地,采用蒋柏藩无机磷分级方法对土壤无机磷形态特征及影响因素进行研究。结果表明:研究区土壤全磷与速效磷含量分别在0.25—1.35 g/kg、1.05—53.01 mg/kg范围,无机磷总量在123.94—934.61 mg/kg,耕地与退耕地以及各退耕地之间全磷、速效磷、各形态无机磷含量水平差异明显,各退耕地磷素含量水平介于耕地与次生马尾松林地之间,退耕地中桃林地、花椒林地磷素含量水平较高、樟树林地、柳杉林地、撂荒草地次之、撂荒灌丛地较低。各样地土壤无机磷占全磷比例在51.2%—72.4%,不同形态的无机磷含量表现为O-PFe-PCa-PAl-P,其中Ca2-P、Al-P对速效磷的贡献率大,Fe-P、Ca8-P贡献较小,O-P、Ca10-P献率最小。不同活性土壤有机碳与不同形态钙素对各形态无机磷在总无机磷中比例的影响较大,p H、容重、粘粒含量、含水量等其它理化性质影响较小。     

Evaluation of extractants for soil humic substances

Summary An evaluation of alkaline extractants was done by isotachophoresis and compared with infrared, ultraviolet and visible spectroscopic analysis. The electrophoretograms show that the humic acid extracted. This result is partially corroborated by the E₄/E₆ ratio. Differences in the carboxyl content and TRIS. In the pyrophosphate humic acid three fractions of high molecular weight were not extracted. This resultis partially corroborated by the E₄/E₆ ratio. Differences in the carboxyl content found by ir spectra of the TRIS humic acid and the NaOH humic acid were not shown in the isotachophoretic separation.     

Carbon sequestration potential of soils in southeast Germany derived from stable soil organic carbon saturation

Sequestration of atmospheric carbon (C) in soils through improved management of forest and agricultural land is considered to have high potential for global CO₂ mitigation. However, the potential of soils to sequester soil organic carbon (SOC) in a stable form, which is limited by the stabilization of SOC against microbial mineralization, is largely unknown. In this study, we estimated the C sequestration potential of soils in southeast Germany by calculating the potential SOC saturation of silt and clay particles according to Hassink [Plant and Soil 191 (1997) 77] on the basis of 516 soil profiles. The determination of the current SOC content of silt and clay fractions for major soil units and land uses allowed an estimation of the C saturation deficit corresponding to the long‐term C sequestration potential. The results showed that cropland soils have a low level of C saturation of around 50% and could store considerable amounts of additional SOC. A relatively high C sequestration potential was also determined for grassland soils. In contrast, forest soils had a low C sequestration potential as they were almost C saturated. A high proportion of sites with a high degree of apparent oversaturation revealed that in acidic, coarse‐textured soils the relation to silt and clay is not suitable to estimate the stable C saturation. A strong correlation of the C saturation deficit with temperature and precipitation allowed a spatial estimation of the C sequestration potential for Bavaria. In total, about 395 Mt CO₂‐equivalents could theoretically be stored in A horizons of cultivated soils – four times the annual emission of greenhouse gases in Bavaria. Although achieving the entire estimated C storage capacity is unrealistic, improved management of cultivated land could contribute significantly to CO₂ mitigation. Moreover, increasing SOC stocks have additional benefits with respect to enhanced soil fertility and agricultural productivity.     

Spectroscopic and elemental investigation of microbial decomposition of aquatic fulvic acid in biological process of drinking water treatment

As humic substances left in treated water tend to form trihalomethans during chlorination, their removal in water treatment processes is a significant concern for drinking water supplies. One of the removal technologies, the biofilm reactor is studied for the microbial decomposition of aquatic fulvic acid (AFA). The AFA is characterized by elemental analysis, UV-Vis, ¹³C-NMR, and IR spectroscopic methods. The spectroscopic and elemental investigation was capable of characterizing the microbial decomposition of AFA. Biologically treated fulvic acid was in a more oxidized state; its spectra displayed a higher degree of condensation of aromatic constituents than influent fulvic acid. Microbial degradation of AFA was more active in the low molecular weight fractions and intensively occurred in the aliphatic fraction.Abbreviations A the absorbance at wavelength - specific absorptivities - AFAs aquatic fulvic acids - AHS aquatic humic substances - COD chemical oxygen demand - Da dalton - DO dissolved oxygen - E₄/E₆ratio a ratio between absorbance at 465 and 665 nm - FA fulvic acid - IR infrared - NMR nuclear magnetic resonance - TOC total organic carbon - UV-Vis ultraviolet-visible     

Distributions of carbon in calcareous soils under different land uses in western Iran

Concentrations of Natural stable and unstable carbon in ecosystems have been used extensively to help to understand a wide range of soil processes and functions. This study was conducted to explore the effects of land use changes on different carbon fractions (F₁, F₂, F₃ and F₄), permanganate oxidizable carbon (POXC), soil organic carbon (SOC) and total organic carbon (TOC) associated with soils in calcareous soils of western Iran. Four popular land uses in the selected site including natural forest, range land, dryland farming and irrigated farming systems were employed as the basis of soil sampling. The results showed a strong relationship between land use conversion and SOC stocks changes. The greatest mean values for carbon content and the least mean values of CaCO₃ in bulk topsoil (0–15 cm) in the forest land were observed. Dryland farming had the least both active and passive pools of C in comparison with the other land uses. The positive and significant correlations was observed between SOC, Total C and POXC contents and different C fractions. Taking C and POXC pools into account, a more definitive picture of the soil C is obtained than when only total C is measured. The influence of land use changes on overall soil carbon stocks could be helpful for making management decision for farmers and policy makers in the future, for enhancing the potential of C sequestration in western Iran.     

Effects of Agronomic Treatments on Structure and Function of Ammonia-Oxidizing Communities

The aim of this study was to determine the effects of different agricultural treatments and plant communities on the diversity of ammonia oxidizer populations in soil. Denaturing gradient gel electrophoresis (DGGE), coupled with specific oligonucleotide probing, was used to analyze 16S rRNA genes of ammonia oxidizers belonging to the β subgroup of the division Proteobacteria by use of DNA extracted from cultivated, successional, and native deciduous forest soils. Community profiles of the different soil types were compared with nitrification rates and most-probable-number (MPN) counts. Despite significant variation in measured nitrification rates among communities, there were no differences in the DGGE banding profiles of DNAs extracted from these soils. DGGE profiles of DNA extracted from samples of MPN incubations, cultivated at a range of ammonia concentrations, showed the presence of bands not amplified from directly extracted DNA. Nitrosomonas-like bands were seen in the MPN DNA but were not detected in the DNA extracted directly from soils. These bands were detected in some samples taken from MPN incubations carried out with medium containing 1,000 μg of NH₄⁺-N ml⁻¹, to the exclusion of bands detected in the native DNA. Cell concentrations of ammonia oxidizers determined by MPN counts were between 10- and 100-fold lower than those determined by competitive PCR (cPCR). Although no differences were seen in ammonia oxidizer MPN counts from the different soil treatments, cPCR revealed higher numbers in fertilized soils. The use of a combination of traditional and molecular methods to investigate the activities and compositions of ammonia oxidizers in soil demonstrates differences in fine-scale compositions among treatments that may be associated with changes in population size and function.     

Decomposition of Organic Carbon in Fine Soil Particles Is Likely More Sensitive to Warming than in Coarse Particles: An Incubation Study with Temperate Grassland and Forest Soils in Northern China

It is widely recognized that global warming promotes soil organic carbon (SOC) decomposition, and soils thus emit more CO₂ into the atmosphere because of the warming; however, the response of SOC decomposition to this warming in different soil textures is unclear. This lack of knowledge limits our projection of SOC turnover and CO₂ emission from soils after future warming. To investigate the CO₂ emission from soils with different textures, we conducted a 107-day incubation experiment. The soils were sampled from temperate forest and grassland in northern China. The incubation was conducted over three short-term cycles of changing temperature from 5°C to 30°C, with an interval of 5°C. Our results indicated that CO₂ emissions from sand (>50 µm), silt (2–50 µm), and clay (<2 µm) particles increased exponentially with increasing temperature. The sand fractions emitted more CO₂ (CO₂-C per unit fraction-C) than the silt and clay fractions in both forest and grassland soils. The temperature sensitivity of the CO₂ emission from soil particles, which is expressed as Q₁₀, decreased in the order clay>silt>sand. Our study also found that nitrogen availability in the soil facilitated the temperature dependence of SOC decomposition. A further analysis of the incubation data indicated a power-law decrease of Q₁₀ with increasing temperature. Our results suggested that the decomposition of organic carbon in fine-textured soils that are rich in clay or silt could be more sensitive to warming than those in coarse sandy soils and that SOC might be more vulnerable in boreal and temperate regions than in subtropical and tropical regions under future warming.     

天山中段北坡森林土壤有机碳库稳定性组分沿海拔的分异规律

在高纬度高海拔区域气温增幅更大的背景下,高山亚高山森林土壤有机碳稳定性组分分配比关系以及由于此差异导致对增温的反馈效应均有待深入阐释。天山森林是以雪岭云杉(Picea Schrenkiana)为单优树种的温带针叶林,在天山北坡中山带(海拔约1760—2800 m)呈垂直落差超过1000 m的带状斑块分布,便于排除混交树种的影响,而量化土壤有机碳库稳定性组分分配比关系沿海拔的分异规律,及其对气候变化的响应情况。沿海拔梯度设置森林样地并分层采集土样,研究各土层土壤总有机碳库(C_SOC)、活性碳库(C_a)、缓效性碳库(C_s)、惰性碳库(C_p)、微生物量碳(MBC)在海拔梯度上的变化特征,通过碳库活度(A)、碳库活度指数(AI)、碳库指数(CPI)、土壤碳密度(SOCD),探讨天山森林土壤有机碳稳定性组分沿海拔的分异特征。结果表明：(1)随着海拔的升高,天山中段北坡云杉森林土壤C_a占比逐步升高,C_s和C_p占比逐步降低,这意味着天山中段北坡云杉...     

Interactive effects of elevated CO2 and nitrogen deposition on fatty acid molecular and isotope composition of above‐ and belowground tree biomass and forest soil fractions

Atmospheric carbon dioxide (CO₂) and reactive nitrogen (N) concentrations have been increasing due to human activities and impact the global carbon (C) cycle by affecting plant photosynthesis and decomposition processes in soil. Large amounts of C are stored in plants and soils, but the mechanisms behind the stabilization of plant‐ and microbial‐derived organic matter (OM) in soils are still under debate and it is not clear how N deposition affects soil OM dynamics. Here, we studied the effects of 4 years of elevated (¹³C‐depleted) CO₂ and N deposition in forest ecosystems established in open‐top chambers on composition and turnover of fatty acids (FAs) in plants and soils. FAs served as biomarkers for plant‐ and microbial‐derived OM in soil density fractions. We analyzed above‐ and belowground plant biomass of beech and spruce trees as well as soil density fractions for the total organic C and FA molecular and isotope (δ¹³C) composition. FAs did not accumulate relative to total organic C in fine mineral fractions, showing that FAs are not effectively stabilized by association with soil minerals. The δ¹³C values of FAs in plant biomass increased under high N deposition. However, the N effect was only apparent under elevated CO₂ suggesting a N limitation of the system. In soil fractions, only isotope compositions of short‐chain FAs (C₁₆₊₁₈) were affected. Fractions of ‘new’ (experimental‐derived) FAs were calculated using isotope depletion in elevated CO₂ plots and decreased from free light to fine mineral fractions. ‘New’ FAs were higher in short‐chain compared to long‐chain FAs (C_20?30), indicating a faster turnover of short‐chain compared to long‐chain FAs. Increased N deposition did not significantly affect the quantity of ‘new’ FAs in soil fractions, but showed a tendency of increased amounts of ‘old’ (pre‐experimental) C suggesting that decomposition of ‘old’ C is retarded by high N inputs.     

Atmospheric Methane Consumption by Forest Soils and Extracted Bacteria at Different pH Values

The effect of pH on atmospheric methane (CH₄) consumption was studied with slurries of forest soils and with bacteria extracted from the same soils. Soil samples were collected from a mixed hardwood stand in New Hampshire, from jackpine and aspen stands at the BOREAS (Boreal Ecosystem Atmosphere Study) site near Thompson, northern Manitoba, from sites in southern Québec, including a beech stand and a meadow, and from a site in Ontario (cultivated humisol). Consumption of atmospheric CH₄ (concentration, approximately 1.8 ppm) occurred at depths of >5 cm in both acidic (pH 4.5 to 5.2) and alkaline (pH 7.2 to 7.8) soils. In slurries of acidic soils, maximum activity occurred at different pH values (pH 4.0 to 6.5). Bacteria extracted from these soils by high-speed blending and density gradient centrifugation showed pH responses different from the pH responses of the slurries. In all cases, these bacteria had a methanotrophy pH optimum of 5.8 and exhibited no activity at pH 6.8 to 7.0, the pH optimum range for known methanotrophs. This difference in pH responses could be useful in modifying media currently used for isolation of these organisms. Methanotrophic activity was induced in previously non-CH₄-consuming soils by preincubation with 5% (vol/vol) CH₄ (50,000 μl of CH₄ per liter) or by liquid enrichment with 20% CH₄. The bacteria showed pH responses typical of known methanotrophs and not typical of preexisting consumers of ambient CH₄. Furthermore, methanotrophs induced by high CH₄ levels were more readily extracted from soil than preexisting ambient CH₄ consumers were. In the alkaline soils, preexisting activity either was destroyed or resisted extraction by the procedure used. The results support the hypothesis that consumers of ambient CH₄ in soils are physiologically distinct from the known methanotrophs.     

Pyrolysis-field ionization mass spectrometry of agricultural soils and humic substances: Effect of cropping systems and influence of the mineral matrix

Whole soil samples, extracted humic substances, the corresponding fulvic (FA) and humic acids (HA) and the extraction residues (humins) from long-term, agricultural test plots were investigated by in-source pyrolysis-field ionization mass spectrometry (Py-FIMS). For the soils distinct differences in the chemical composition of the organic matter in differently managed fields were observed. The FI mass spectra of the extracted humic substances gave complementary chemical information, as they cover a larger mass range compared to the whole soil spectra. The chemical, structural information of the conventional alkaline extraction residues was demonstrated by Py-FIMS spectra to be similar to that of the related soil samples. Influences of mineral matrix to organic matter ratios were studied on mixtures of extracted humic substances with defined mineral components such as quartz, basalt, iron oxide (Fe₂O₃), Ca-montmorillonite, kaolinite and illite. It was shown that in these mixtures the number of mass signals detected and the covered mass range decreased, when organic carbon concentrations (C_org) in this synthetic mineral matrix dropped below 2% (w/w). Limitations in the direct application of Py-FIMS might arise in the case of natural soil samples with C_org concentrations below 0.5% (w/w), high contents of swelling clay minerals and iron oxides. ei]{gnR}{fnMerckx}     

Occurrence of Fatty Acid Short‐Chain‐Alkyl Esters in Fruits of Celastraceae Plants

Small amounts of a mixture of fatty acid short‐chain‐alkyl esters (FASCAEs) were obtained from the fruits of twelve plant species of Celastraceae family, and in five of them the FASCAEs were present not only in the arils but also in the seeds. These mixtures contained 32 individual FASCAE species, which formed four separate fractions, viz. FA methyl, ethyl, isopropyl, and butyl esters (FAMEs, FAEEs, FAIPEs, and FABEs, resp.). The FASCAE acyl components included the residues of 16 individual C₁₄–C₂₄ saturated, mono‐, di‐, and trienoic FAs. Linoleic, oleic, and palmitic acids, and, in some cases, also α‐linolenic acid predominated in FAMEs and FAEEs, while myristic acid was predominant in FAIPEs. It can be suggested that, in the fruit arils of some plant species, FAMEs and FAEEs were formed at the expense of a same FA pool characteristic of a given species and were strongly different from FAIPEs and FABEs esters regarding the mechanism of their biosynthesis. However, as a whole, the qualitative and quantitative composition of various FASCAE fractions, as well as their FA composition, varied considerably depending on various factors. Therefore, separate FASCAE fractions seem to be synthesized from different FA pools other than those used for triacylglycerol formation.