Phylogenetic and biosystematic relationships in four highly disjunct polyploid complexes in the subgenera Ceterach and Phyllitis in Asplenium (Aspleniaceae)

Phylogenetic studies using DNA sequences of two chloroplast regions, rbcL and trnL-F, demonstrate that the proposed genus Ceterach is a small clade within the large genus Asplenium, and sister to the Phyllitis clade. The Ceterach clade is characterised by irregular anastomosing veins and often densely scaled leaf blades. Its taxonomic status as a group nested within Asplenium is confirmed, and it is accepted here as a subgenus with seven species. The Ceterach clade comprises four lineages that correspond to disjunct polyploid complexes: the A. aureum clade forming a polyploid complex (4×, 6×, 8×) in Macaronesia, the A. ceterach clade forming a polyploid complex (2×, 4×, 6×) in the Mediterranean Basin, the A. paucivenosum clade (4×, 6×) in central Asia, and the A. dalhousiae clade (2×) with a disjunct distribution in the Himalaya, Yemen and Eritrea, and southwestern North America. Asplenium paucivenosum is sister to all other members of the Ceterach clade, whereas A. dalhousiae is sister to the A. aureum clade that includes tetraploid A. aureum, hexaploid A. lolegnamense, and octoploid A. parvifolium. Asplenium ceterach and its variations – including the hexaploid A. ceterach subsp. mediterraneum subsp. nov. first described below – form a monophyletic unit, sister to a clade consisting of A. aureum and A. dalhousiae. Asplenium cordatum from Africa and A. haugthonii from the isolated atlantic island of St. Helena are not members of the Ceterach clade, which suggests that leaf blades with dense indumenta have evolved at least twice within asplenioid ferns. The allotetraploid species A. hybridum has the chloroplast DNA from A. ceterach, and therefore the latter species is the maternal ancestor of the former. The other parent of this hybrid species is A. sagittatum that is nested within the sister clade of Ceterach, the Phyllitis clade comprising A. sagittatum and A. scolopendrium. The findings suggest that the current distribution of Ceterach is either the result of long-distance dispersal or represents fragmented relicts of a previously more widely distributed species.     

Isolation and characterization of some mycelia inhabiting Tuber ascomata

Tuber spp. are ectomycorrhizal ascomycetes that produce subterranean ascomata known as truffles. Truffles can be regarded as complex microhabitats hosting bacteria and yeasts. In this paper we show that guest filamentous fungi are also associated to truffle ascomata, regardless of the Tuber spp., and report the morpho-molecular characterization of seven truffle-hosted mycelia isolated from healthy and intact Tuber ascomata. Some of these isolates were shown to be related to the fungal endophytes of plants. Interestingly, the truffle-hosted mycelia grew stuck to the hyphal wall of their partner when co-cultivated with the Tuber borchii mycelium, but not when co-cultivated with the test species Agaricus macrosporus. The present data suggest that guest filamentous fungi can be added to the list of truffle-interacting microorganisms.     

黑木耳复合群中种类学名说明

黑木耳在我国已经有1 000多年栽培历史,是我国最重要的栽培真菌之一,多年来我国黑木耳的学名一直使用模式产地为欧洲的Auricularia auricula-judae。最近的研究表明A. auricula-judae实际为一复合种,该复合种在全球范围内有5个种。其中A. auricula-judae仅分布于欧洲;美洲有2个种,生长在针叶树上的美洲木耳A. americana和生长在阔叶树上的尚未命名的木耳。中国该类群有3个种：自然分布和栽培最广泛的黑木耳的学名应为A. heimuer,此外,短毛木耳A. villosula在我国东北也广泛分布,并有少量栽培,生长针叶树上的木耳为美洲木耳A. americana,主要分布于中国东北和华北。     

Experimental hybridization of Angiostrongylus mackerrasae, Bhaibulaya, 1968 and Angiostrongylus cantonensis (Chen, 1935)

Angiostrongylus mackerrasae and A. cantonensis are closely related and their status as distinct species was tested by experimental hybridization. Hybridization between A. mackerrasae and A. cantonensis was observed and the morphology of the F₁ hybrids was found to be intermediate between that of the parental species which suggests strongly that A. mackerrasae and A. cantonensis are both valid species. However, male F₁ hybrids were sterile, whereas females were fertile; no evidence of parthenogenesis or other form of asexual reproduction were observed in either species. It is suggested that A. mackerrasae and A. cantonensis may cross breed in nature.     

Historical biogeography of the lineage Atopochara trivolvis PECK 1941 (Cretaceous Charophyta)

The evolutionary species Atopochara trivolvis represents a unique case of a charophyte with a well-documented, long-lasting fossil record of biostratigraphical interest and a worldwide distribution. This provides an excellent basis for analysing the historical biogeography of this important species. The origin of the lineage is recorded in the Early Berriasian of Western Europe, where an archipelago-like palaeogeography would have favoured allopatric speciation and small-sized original biogeographic ranges. The species first reached Eastern Europe during the Valanginian and expanded to China during the Hauterivian. It expanded worldwide during the Barremian–Aptian, first colonizing North Africa and South America through the Guinea Corridor and subsequently reaching North America. The Barremian–Aptian worldwide expansion was probably facilitated by the monoecious nature of A. trivolvis, which allowed for long-distance animal dispersal, as is the case with extant Chara. An initial fragmentation in the biogeographic range of A. trivolvis can be detected in the Albian–Cenomanian, when the species displayed up to 5 different morphotypes in scattered localities of Eurasia and North America. During the Turonian sea-level highstand A. trivolvis became extinct also from most of these localities, while, in the Latest Cretaceous plesiomorphic populations of A. trivolvis ulanensis survived in Mongolia and Northern China. The species became completely extinct near the K/T boundary.     

Brown tide alga, Aureococcus anophagefferens, can affect growth but not survivorship of Mercenaria mercenaria larvae

Since the collapse of populations of northern quahogs (hard clam), Mercenaria mercenaria, in Long Island bays, brown tide blooms have been proposed to pose a barrier to recovery. We tested whether the brown tide alga, Aureococcus anophagefferens, affects survivorship, development or growth in the larvae of M. mercenaria. There was no effect of A. anophagefferens (clone CCMP1708) on survivorship of hard clam larvae, even at bloom concentrations. Under most experimental conditions, larvae fed a mixed diet of Isochrysis galbana (T-Iso) and A. anophagefferens or a single species diet of A. anophagefferens, developed faster than those fed a single species diet of Isochrysis. A mixed diet of I. galbana and A. anophagefferens either had no effect on larval growth, or produced enhanced growth at moderate cell densities (8 × 10⁴ cells ml⁻¹ of A. anophagefferens). Similarly, moderate cell densities of a single food diet of A. anophagefferens (1.6 × 10⁵ cells ml⁻¹) generally had no effect on the growth of larvae. When fed bloom concentrations (10⁶ cells ml⁻¹) of A. anophagefferens, larvae developed faster, but growth was reduced, compared to those fed an equal biovolume of Isochrysis. Larvae fed slow growing or near stationary phase cultures of A. anophagefferens experienced reduced growth and slowed development. These data suggest a qualitative difference between slow or stationary phase and fast growing cultures of the brown tide alga. They also suggest that impacts of A. anophagefferens, when present, are likely to be due to the nutritional quality of this alga as a food source for hard clam larvae, which could have a lasting legacy through ontogeny. Additional studies are needed to test whether our findings apply to more recently isolated strains of A. anophagefferens.     

The Aspergillus niger carbon catabolite repressor encoding gene, creA

In order to undertake a comparative analysis of carbon catabolite repression in two Aspergillus species, the creA gene has been isolated from A. niger by cross hybridization, using the cloned A. nidulans gene. The A. niger gene has been shown to be functional in A. nidulans by heterologous complementation of the creA204 mutation of A. nidulans. Overall, the genes show 90% sequence similarity (82% identity) at the amino acid (aa) level. There were some striking similarities between the aa sequences encoded by the two fungal creA genes and two genes involved in carbon catabolite repression in Saccharomyces cerevisiae. The zinc-finger regions showed 96% similarity (84% identity) with the zinc-finger region of the MIG1 gene of S. cerevisiae. The CREA protein contains a stretch of 42 aa that is identical in A. niger and A. nidulans, and these show 81% similarity (33% identity) with a region of the S. cerevisiae RGR1 gene.     

Alexandrium catenella and Alexandrium minutum blooms in the Mediterranean Sea: Toward the identification of ecological niches

Annual recurrent blooms of the toxic dinoflagellates Alexandrium catenella and Alexandrium minutum were detected from 2000 to 2003 in harbours along the Catalan coast. The interrelation study between the occurrence of the blooms and specific external conditions at the study sites demonstrated that different factors are required for the bloom of each Alexandrium species. Concentrations higher than 10⁵ cells l⁻¹ of A. catenella were only detected in Tarragona harbour. These blooms were associated with water surface temperature between 21 and 25 °C and salinities of around 34 psu or higher than 37 psu. A. minutum appeared widely spread along the Catalan coast, though the most intensive and recurrent blooms of this species were observed in Arenys de Mar harbour. Concentrations of millions of cells per litre of A. minutum were associated with water temperatures below 14 °C and salinities of around 34–36 psu. A. minutum cell densities showed a positive significant correlation with NO₃ but a negative correlation with NH₄. On the other hand, A. catenella blooms dominated when both NO₃ and NH₄ levels were high. The prevailing inorganic nitrogen form (NO₃ vs. NH₄) could explain why these two species rarely coincide in the same harbours. Accumulation of cysts in the sediment was found to be an important potential factor for the recurrence of these species. The 4.3 × 10³ A. catenella cysts cm⁻³ of wet sediment in Tarragona harbour and the 3.02 × 10³ A. minutum cysts cm⁻³ of wet sediment in Vilanova harbour were the highest concentrations observed from the cyst study. Confined waters such as harbours play an important role as reservoirs for the accumulation of cysts and vegetative cells, which contributes to the expansion of these dinoflagellates in the region. However, the particular environmental conditions are also decisive factors of bloom intensity.     

Composition and properties of Albizia lebbeck gum exudate

An analytical study has been made of six gum specimens from Albizia lebbeck, Leguminosae. Galactose, mannose, arabinose, glucuronic acid and its 4-O--metyl analogue are present in all the specimens studied. Rhamnose was not detected according to sugar analysis and spectral data. The absence of this sugar, the high acidity and the relatively low limit viscosity number contrast with the values reported previously for one African sample of A. lebbeck. The lead content is much higher than that recorded for other Albizia gums. ¹³C-NMR spectrum of this gum, in deuterium oxide, shows good resolution.     

Genes encoding multiple drug resistance-like proteins in Aspergillus fumigatus and Aspergillus flavus

Polymerase chain reaction using degenerate primers was used to identify genes encoding proteins of the ATP-binding cassette superfamily in Aspergillus fumigatus and Aspergillus flavus. In A. fumigatus, two genes (AfuMDR1 and AfuMDR2) encoding proteins of the ATP-binding cassette superfamily were identified. One gene (AflMDR1) was isolated from A. flavus and is the apparent homologue to AfuMDR1. AfuMDR1and AflMDR1 encode proteins of molecular weights 148 000 and 143 000, respectively, each containing 12 putative transmembrane regions and two ATP-binding sites. These proteins are arranged in two homologous halves, each half consisting of a hydrophobic region (encoding six putative transmembrane domains) and an ATP-binding site. The AfuMDR1 and AflMDR1-encoded proteins bear a high degree of similarity to the Schizosaccharomyces pombe leptomycin B resistance protein and to human MDR1. The second gene identified in A. fumigatus, AfuMDR2, encodes a protein of molecular weight 85 000, containing four putative transmembrane domains and an ATP binding domain. The encoded protein is similar to those encoded by MDL1 and MDL2, two MDR-like genes of Saccharomyces cerevisiae. Expression of AFUMDR1 in S. cerevisiae conferred increased resistance to the antifungal agent cilofungin (LY121019), an echinocandin B analog.     

Geographic differentiation of monoterpenes from Abies procera and Abies magnifica

Cortical oleoresins from 352 Abies magnifica and A. procera trees, collected in 35 localities, were analysed for composition of their monoterpene fractions. The monoterpenes were composed primarily of -pinene, β-pinene, limonene and β-phellandrene, with camphene and 3-carene appearing only sporadically in larger amounts. Limonene, β-phellandrene, -pinene and 3-cerene were used to study the transitional populations in northern California and southern and central Oregon and the transitional-like populations in southern Sierra Nevada. The populations segregated latitudinally into three related clusters—above 44° (A.procera), between 44° and 40° (transitional), and below 40° (A.magnifica). A.magnifica from southern Sierra Nevada and A.magnifica from Mtn. Shasta differed in a number of parameters, with southern Sierra Nevada populations being chemically much closer to typical A. magnifica from central and northern Sierra Nevada. While monoterpene and morphological data did not allow a clear Interpretation of the status of the transitional and southern populations, the paleobotanical evidence favored the recent evolution over introgression. The desirability of additional studies was indicated.     

Isoenzymatic variability in seeds of some spanish common beans (Phaseolus vulgaris L. Leguminosae): Relation to their domestication centers

Phaseolus vulgaris is an important crop species. The cultivated common bean derives from wild forms in two independent domestication centers in Mesoamerica and South America. We report a study of electrophoretic patterns of seven isoenzymatic systems in 29 samples of P. vulgaris seeds. Nineteen of them are from northern Spain, four are from Mesoamerican and six are South American forms. The isoenzymatic activity of esterases, cytochrome c oxidase, acid phosphatase, alkaline phosphatase, alcohol dehydrogenase, shikimate dehydrogenase and glutamate oxaloacetic transaminase were studied. On the basis of electrophoretic patterns of seed isoenzymes, four groups can be recognized using clustering procedures (UPGMA). Comparing this biochemical information with previous morpho-agronomic studies, the possible primary domestication centers of the cultivars are discussed.     

唇形科鼠尾草属的物种多样性与分布

为全面了解唇形科鼠尾草属(Salvia)植物的多样性和分布格局及其形成机制, 作者查阅了国际权威生物多样性信息网站(GBIF, The Plant List)、中国数字植物标本馆(CVH)、教学标本资源共享平台和中国自然保护区标本资源共享平台中该属物种名称及标本采集信息, 以及国内32家标本馆的标本, 分析并绘制其物种分布图。结果显示, 具有明确地理坐标的世界和中国分布信息分别有57,674条和11,596条, 已接受种名952个。在世界范围内, 以中南美洲(510种)物种数量最多, 其次是西亚(270种)、欧洲(117种)、东亚(97种)和北美(94种); 在国家尺度上, 以墨西哥物种数量最多(322种), 其次是俄罗斯(109种)、土耳其(88种)、美国(85种)和中国(82种)。在中国, 以云南和四川省鼠尾草种数最多(合计占全国的63%), 两省分布最多的县域地区分别是玉龙县(23种)、香格里拉县(20种)、大理市(13种)和木里县(17种)、宝兴县(13种)、马边县(13种)。在自然地理区域上, 以横断山区最为丰富, 占该属全国物种总数的52.8%, 特有种达23种; 广布种以荔枝草(S. plebeia)分布的县域数量最多(395县), 其次是鼠尾草(S. japonica) (199)、丹参(S. miltiorrhiza) (192)、贵州鼠尾草(S. cavaleriei) (173)、华鼠尾草(S. chinensis) (153)和粘毛鼠尾草(S. roborowskii) (100)。鼠尾草属主要分布于北半球温带及亚热带高海拔地区, 中国是东亚的多样性分布中心, 代表性广布种及狭域特有种均有分布, 尤以云南、四川以及横断山区的物种多样性和特有种比例最高。     

The dinoflagellate Alexandrium minutum in Cape Town harbour (South Africa): Bloom characteristics, phylogenetic analysis and toxin composition

A novel bloom of Alexandrium minutum occurred in an inner basin of the Cape Town harbour from November 2003 to February 2004. Cellular concentrations reached a maximum of 1.4 × 10⁸ cells l⁻¹ during the mid-December period with corresponding chlorophyll a concentrations of 243 mg m⁻³. Primary productivity measurements conducted during the latter part of the bloom revealed a maximum assimilation number of 11.17 mg C mg Chl a⁻¹ h⁻¹ during the middle of the day. Productivity during this post-peak period was sustained largely by the reduced nitrogen species NH₄ and urea (96%) as measured using ¹⁵N tracer techniques. The large subunit ribosomal DNA sequence of A. minutum isolates from Cape Town harbour was identical to conspecifics collected in Western Europe and in Australia. The composition of tetrahydropurine neurotoxins associated with paralytic shellfish poisoning (PSP) was limited to gonyautoxins (GTX1-GTX4). This profile combined with evidence of a low toxin cell quota (1.5 fmol GTX cell⁻¹) supports a close association of this taxon with other members of the A. minutum species complex, particularly from Europe. Toxin analysis from black mussels collected during this bloom indicated that the accumulated PSP toxins originated from A. minutum and not from Alexandrium catenella as is most often the case along the South African coast.     

Cryptobiosis in the Eutardigrade Adorybiotus (Richtersius) coronifer: Tolerance to Alcohols, Temperature and de novo Protein Synthesis

The eutardigrade Adorybiotus (Richtersius) coronifer survives cryptobiosis for years. During entrance into anhydrobiosis this species accumulates the disaccharide trehalose reaching a maximum content of 2.3% d.w.

In the present study we examined the survival of anhydrobiotic A. (R)coronifer during exposure to alcohols of various polarity, and to high temperatures, as well as qualitative changes in protein synthesis during entrance into anhydrobiosis. Results showed that A. (R) coronifer in anhydrobiosis survived exposure to ethanol for less than 10 minutes whereas exposure to 1-butanol only decreased survival to 40% after the first 7 days and 1-hexanol did not change survival from the controls after the first 7 days. A. (R) coronifer survived temperatures up to approximately 70 °C for 60 minutes without any decrease in survival. However, survival decreased rapidly when the exposure temperature was increased to above 70 °C and no animals survived exposure to 100 °C. During the entrance into anhydrobiosis a protein with a molecular weight of approximately 71 kDa appeared on acryl amide gels showing protein bands after the animals had been incubated with ³H-Leucine. This protein may belong to the Heat-shock protein (Hsp) 70 family. The results on the survival of A. (R) coronifer during exposure to alcohols and high temperature are discussed in light of the trehalose content earlier described in this animal during anhydrobiosis.     

内蒙古地区道地药材蒙古黄芪资源调查及产地适宜性

在文献检索的基础上,运用样地调查法和踏查法调查野生、人工种植蒙古黄芪的资源分布、生境特点、生长状况,探寻影响蒙古黄芪生长的生态因子,结合中药材产地适宜性分析地理信息系统,区划蒙古黄芪在内蒙古地区的适宜产地.结果表明: 栽培蒙古黄芪生产区域主要分布在武川县、固阳县等15个旗县,其生态特征为海拔高于1000 m,土壤类型为沙土、砂砾土和钙土.野生蒙古黄芪覆盖内蒙古中东部地区,生于向阳处,喜冷凉干燥气候,适宜沙壤土或砂砾土,忌阴湿黏重土壤.应用TCMGIS-Ⅱ分析得到内蒙古境内野生蒙古黄芪生态因子相似系数>95%的生态适宜区为43个县区,面积为94460.30 km²;栽培蒙古黄芪生态适宜区为32个县区,面积为76013.93 km².     

群落演替对呼伦贝尔草地两种优势植物繁殖分配及生态化学计量的影响

为了探究草地群落演替过程中不同优势种的生理生态适应性,本研究采用空间代替时间序列的方法,分析呼伦贝尔草地米氏冰草群落—米氏冰草+冰草群落—冰草群落演替系列的土壤养分、两优势种的生物量及C、N和P含量。结果表明: 随着米氏冰草群落—米氏冰草+冰草群落—冰草群落的演替,土壤全碳、全氮、速效氮及速效磷含量均显著升高;米氏冰草和冰草叶、茎和根的N、P含量及N/P均显著升高,而各构件的C/N降低;米氏冰草叶的C含量及冰草叶、茎和根的C含量均显著升高。米氏冰草叶C/P及冰草根和叶C/P均显著升高,而米氏冰草根和茎C/P及冰草茎C/P均显著下降。在米氏冰草+冰草共优势种群落中,米氏冰草通过降低茎和根C含量,增加叶C的积累,提高其种间竞争力, 而冰草通过降低根冠比和生殖比来适应环境变化。米氏冰草在不同群落中均受N限制(N/P<14);而冰草在单优势种群落中受P限制(N/P>16),在共优势种群落中受N和P限制(14相似文献   

Phenotypic variations in natural populations of Amygdalus pedunculata

Aims Our objectives were to determine the phenotypic variations, adaption and distribution patterns in seven natural Amygdalus pedunculata populations.Methods We analyzed 14 phenotypic traits from 120 individuals in seven populations of A. pedunculata by variance analysis, correlation analysis, and cluster analysis.Important findings Results showed that there were plentiful phenotypic variation within and among populations. In particular, the phenotypic variation within population was 40.91%, higher than that among populations (35.29%), which indicated that the phenotypic variation within population was the main source of the phenotypic variation in A. pedunculata. Mean differentiation coefficient was 45.90%, and mean coefficient of variation of 14 traits was 15.59%, ranged from 9.39% to 31.98%. Mean annual temperature, latitude, length of frost-free period, longitude and altitude appear to be prominent ecological factors influencing phenotypic traits. Mean annual temperature and length of frost-free period were key indicators to phenotypic of A. pedunculata in different site conditions. According to principal component analysis and unweighted pair-group method with arithmetic means (UPGMA) cluster analysis, the seven populations of A. pedunculata could be divided into two groups. In mountainous region, A. pedunculata’s leaf blade was usually rotund to oblong, fruit nearly spherical shape with shorter fruit stem, stone was usually ovoid to spherical shape. In contrast, in sandy region, leaf blade was long oval to ovate-lanceolate, fruit and stone was usually flat ovoid with longer fruit stem. Our results provide critical information for the resource collection and breeding of this ecologically important species.     

A two-step bioconversion process for vanillin production from ferulic acid combining Aspergillus niger and Pycnoporus cinnabarinus

A two-step bioconversion process of ferulic acid to vanillin was elaborated combining two filamentous fungi, Aspergillus niger and Pycnoporus cinnabarinus. In the first step, A. niger transformed ferulic acid to vanillic acid and in the second step vanillic acid was reduced to vanillin by P. cinnabarinus. Ferulic acid metabolism by A. niger occurred essentially via the propenoic chain degradation to lead to vanillic acid, which was subsequently decarboxylated to methoxyhydroquinone. In 3-day-old cultures of P. cinnabarinus supplied with vanillic-acid-enriched culture medium from A. niger as precursor source, vanillin was successfully produced. In order to improve the yields of the process, sequential additions of precursors were performed. Vanillic acid production by A. niger from ferulic acid reached 920 mg l⁻¹ with a molar yield of 88% and vanillin production by P. cinnabarinus from vanillic acid attained 237 mg l ⁻¹ with a molar yield of 22%. However, the vanillic acid oxidative system producing methoxyhydroquinone was predominant in P. cinnabarinus cultures, which explained the relatively low level in vanillin.