New Selective Media for Enumeration and Recovery of Fluorescent Pseudomonads from Various Habitats

New media (S1 and S2) were formulated that provide a high degree of selectivity and detection of fluorescent pseudomonads on initial plating. The selectivity of the S-type media was based on a detergent, sodium lauroyl sarcosine, and an antibiotic, trimethoprim. A total of five soils from different geographical locations and one sewage sludge sample were examined. On S1 medium, isolates from two soils with low fluorescent pseudomonad populations exhibited a high frequency of arginine dihydrolase (78%) and oxidase-positive (95%) phenotypes, but no fermentative isolates were recovered. Medium S2 was more defined and selective than S1, but lower numbers of fluorescent pseudomonads were recovered on S2. In soils in which fluorescent pseudomonads represent a small proportion of the total population, S1 medium consistently recovered high percentages of fluorescent phenotypes (82.5%).     

Broth medium for enrichment of Vibrio fluvialis from the environment.

A medium was designed for the enrichment and enumeration of Vibrio fluvialis from environmental samples. The medium contains 1% peptone plus 4% sodium chloride and 5 micrograms of novobiocin per ml, pH 8.5. This V. fluvialis enrichment medium (FEM) was tested, in comparison with alkaline peptone (AP), in field samplings. A total of 177 samples (estuarine waters and sediment, sewage, and crabs) collected over a 14-month period were examined with FEM and with AP broth. Results showed that FEM was more effective than AP in detecting V. fluvialis, particularly from water and sewage samples with low salinities (less than 6%). The best recovery of V. fluvialis occurred when both enrichment media were used simultaneously.     

Broth medium for enrichment of Vibrio fluvialis from the environment

A medium was designed for the enrichment and enumeration of Vibrio fluvialis from environmental samples. The medium contains 1% peptone plus 4% sodium chloride and 5 micrograms of novobiocin per ml, pH 8.5. This V. fluvialis enrichment medium (FEM) was tested, in comparison with alkaline peptone (AP), in field samplings. A total of 177 samples (estuarine waters and sediment, sewage, and crabs) collected over a 14-month period were examined with FEM and with AP broth. Results showed that FEM was more effective than AP in detecting V. fluvialis, particularly from water and sewage samples with low salinities (less than 6%). The best recovery of V. fluvialis occurred when both enrichment media were used simultaneously.     

Development and use of a selective medium for isolation of Leuconostoc spp. from vegetables and dairy products.

A selective medium (LUSM medium) for the isolation of Leuconostoc spp. was developed. This medium contained 1.0% glucose, 1.0% Bacto Peptone (Difco), 0.5% yeast extract (BBL), 0.5% meat extract (Difco), 0.25% gelatin (Difco), 0.5% calcium lactate, 0.05% sorbic acid, 75 ppm of sodium azide (Sigma), 0.25% sodium acetate, 0.1% (vol/vol) Tween 80, 15% tomato juice, 30 micrograms of vancomycin (Sigma) per ml, 0.20 microgram of tetracycline (Serva) per ml, 0.5 mg of cysteine hydrochloride per ml, and 1.5% agar (Difco). LUSM medium was used successfully for isolation and enumeration of Leuconostoc spp. in dairy products and vegetables. Of 116 colony isolates obtained from fresh raw milk, curdled milk, or various vegetables, 115 were identified as members of the genus Leuconostoc. A total of 89 of these isolates were identified to species; 13.5% of the isolates were Leuconostoc cremoris, 7.9% were Leuconostoc mesenteroides subsp. mesenteroides, 11.2% were Leuconostoc mesenteroides subsp. dextranicum, 16.9% were Leuconostoc mesenteroides subsp. paramesenteroides, 10.1% were leuconostoc lactis, and 40.4% were Leuconostoc oenos. When we compared the counts obtained for two Leuconostoc strains, Leuconostoc dextranicum 181 and L. cremoris JLL8, on MRS agar and LUSM medium, we found no significant difference between the values obtained on the two media.     

菖蒲和石菖蒲的生长特性及其对生活污水净化功能的比较研究

以菖蒲和石菖蒲为对象,通过漂浮栽植研究了其在不同浓度生活污水中的生长特性及其对污水TN、NH3-N、TP、CODCr的去除情况。结果表明,菖蒲在中浓度污水中生长最好,其生物量显著高于低、高浓度,而石菖蒲在低浓度污水中生长最好,其生物量显著高于中、高浓度。菖蒲对中浓度污水中TN、TP、CODCr的去除率分别为96.85%、82.62%、88.89%,对低浓度污水中TN、TP、CODCr的去除率分别为99.87%、91.38%、83.34%,净化效果均高于高浓度(96.58%、80.96%、77.55%),但对NH3-N的去除率在高浓度污水中最好,为99.46%。石菖蒲净化中浓度污水的效果最好,对TN、NH3-N、TP、CODCr的去除率分别为94.20%、78.06%、89.43%、74.98%,对高浓度污水中的NH3-N、TP、CODCr的去除效果也较好,去除率分别为94.62%、91.95%、87.08%,但对TN去除率为59.14%,显著低于低浓度(98.73%)和中浓度(94.20%)。     

Enumeration of Aeromonas hydrophila from domestic wastewater treatment plants and surface waters

Influents, effluents and sludges from sewage purification plants and surface water samples were examined quantitatively for Aeromonas hydrophila on the mA medium of Rippey and Cabelli. Between 10(4) and 10(6)/ml A. hydrophila were found in domestic wastewaters. On the average 99.975% were removed by activated sludge and 98.25% by trickling filters. Only 20.9% of A. hydrophila end up in the primary sludge, which contained up to 10(7)/g dry sludge. After 3 months, anaerobically (methane) fermented and partially dried sludge from trickling filters contained more than 10(6) A. hydrophila/g dry sludge. Surface water receiving raw sewage contained several hundreds of A. hydrophila/ml, comparable with the numbers found in effluent waters, while surface receiving no municipal wastewater and destined for the preparation of drinking water contained only small and negligible numbers. It was concluded that A. hydrophila was omnipresent in surface water.     

Heat Injury of Bacillus subtilis Spores at Ultrahigh Temperatures

The following three criteria indicated that Bacillus subtilis A spores were injured, but not completely inactivated, by ultrahigh temperature treatment. (i) Significant reductions in survivors were observed when spores were enumerated with a standard medium but not when the medium contained added CaCl(2) and sodium dipicolinate. (ii) After a damaging heat treatment, more survivors were enumerated with the standard medium after incubation at 32 C than at 45 C, which was opposite to the result with untreated or slightly heated spores. (iii) Apparent numbers of survivors increased during the initial period of 3 C storage when enumerated with the standard medium at 45 C. No injury was evident when survivors were enumerated at either incubation temperature with the medium containing added CaCl(2) and sodium dipicolinate. Heat activation of the spores did not significantly influence the appearance of heat injury. The data suggested that the heat injury occurred in a germination system which was required in the absence of CaCl(2) and sodium dipicolinate.     

Isolation of Acinetobacter from Soil and Water

An enrichment culture procedure for isolating members of the genus Acinetobacter from soil and water is described. It involves the use of vigorously aerated mineral media at relative low pH, supplemented with acetate or other suitable carbon source and nitrate as nitrogen source. With this method, virtually all samples of soil and water yielded representatives of this genus. Semiquantitative comparisons of the numbers of Acinetobacter and of all bacteria capable of aerobic growth in a complex medium revealed that Acinetobacter constituted no less than 0.001% of the total heterotrophic aerobic population in soil and water and was one of the predominant organisms in some water samples.     

Oligotrophic bacteria in ultra-pure water systems: Media selection and process component evaluations

Summary Presently, tryptic soy agar (TSA) medium is used in the semiconductor industry to determine the concentration of viable oligotrophic bacteria in ultra-pure water systems. Deionized water from an ultra-pure water pilot plant was evaluated for bacterial growth at specific locations, using a non-selective medium (R2A) designed to detect injured heterotrophic as well as oligotrophic bacteria. Results were compared to those obtained using Tryptic Soy Agar. Statistically greater numbers of bacteria were observed when R2A was used as the growth medium. Total viable bacterial numbers were compared both before and after each treatment step of the recirculating loop to determine their effectiveness in removing bacteria. The reduction in bacterial numbers for the reverse osmosis unit, the ion exchange bed, and the ultraviolet sterilizer were 97.4%, 31.3%, and 72.8%, respectively, using TSA medium, and 98.4%, 78.4%, and 35.8% using R2A medium. The number of viable bacteria increased by 60.7% based on TSA medium and 15.7% based on R2A medium after passage of the water through an in-line 0.2-m pore size nylon filter, probably because of the growth of bacteria on the filter. Our results suggest that R2A medium may give a better representation of the microbial water quality in ultra-pure water systems and therefore a better idea of the effectiveness of the various treatment processes in the control of bacteria.     

Detection of low numbers of pathogenic Yersinia enterocolitica in environmental water and sewage samples by nested polymerase chain reaction

Isolation of pathogenic Yersinia enterocolitica from water and sewage by traditional culture techniques is time-consuming and subsequent differentiation between pathogenic and non-pathogenic strains can be difficult and unreliable. A nested polymerase chain reaction (PCR) procedure was used for the detection of low numbers of Y. enterocolitica in spiked samples from natural surface sources with variable background flora ranging from oligotrophic water to sewage. Water and sewage samples were filtered and filters enriched overnight in a non-selective medium. Nested PCR conducted on enriched broth, prepared by use of a rapid and simple preparation step consisting of centrifugation, proteinase K treatment and boiling, enabled the detection of 8-17 cfu 100 ml-1 water with background levels of up to 8700 heterotrophic organisms ml-1 and 10,000 cfu coliform organisms 100 ml-1 water. The analysis can be completed within 2-3 d and should be a significant tool in monitoring environmental waters and drinking water sources for the presence of pathogenic Y. enterocolitica.     

Enumeration of Bacteriophages and Host Bacteria in Sewage and the Activated-Sludge Treatment Process

Bacteriophage populations in an activated-sludge sewage treatment plant were enumerated. A newly developed assay for quantitation of total phages, employing direct electron microscopic counts, was used in conjunction with the plaque assay. The total concentration of phages was significantly higher in reactor mixed liquor and effluent than in influent sewage, indicating a net production of phages within the reactor. Maximum total phage concentrations in the fluid phase of sewage, activated-sludge mixed liquor, and reactor effluent were 2.2 × 10⁷, 9.5 × 10⁷, and 8.4 × 10⁷/ml, respectively. Conditions were optimized for isolation of predominant heterotrophic aerobic bacteria from sewage and mixed liquor. Blending at ice water temperatures was superior to ultrasound or enzyme treatments for maximum release of viable bacteria from microbial floc. A solidified extract of mixed liquor was superior to standard media for cultivating maximum numbers of heterotrophic bacteria. The highest culture counts for sewage and mixed liquor were 1.4 × 10⁷ and 1.3 × 10⁹/ml, respectively, which represented only 3 and 6.8% of the total microscopic cell counts. Only 3 out of 48 dominant bacterial isolates from either mixed liquor or sewage were hosts for phages present in the system. The sum of phage populations infecting these three hosts accounted for, at best, 3.8% (sewage) and 0.2% (mixed liquor) of the total number of phages present. Generally, specific phage titers were lower in mixed liquor than in sewage, indicating that these hosts were not responsible for the net production of phages in the reactor. This study emphasizes the limitations of the plaque assay for ecological studies of phages, and it suggests that bacteria responsible for phage production in activated-sludge mixed liquor are either minor components of the heterotrophic population, floc-producing strains, or members of other physiological groups.     

Detection and analysis of two serotypes of ammonia-oxidizing bacteria in sewage plants by flow cytometry.

Two different serotypes of the genus Nitrosomonas were isolated from samples of the sewage plant Heidelberg. These nitrifiers were enumerated in activated sludge of various other sewage plants after immunofluorescent labeling and staining with propidium iodide by flow cytometry. The concentrations of these serotypes of Nitrosomonas spp. were in the range of 0.1 to 2%. Also, a test for the determination of the activity of ammonia-oxidizing bacteria was developed. Nitrite-oxidizing bacteria were specifically inhibited with sodium chlorate, and the activity of ammonia-oxidizing bacteria could be calculated from the increase of nitrite. Concentrations and activities of ammonia oxidizers were measured for a period of 6 months in the sewage plant Heidelberg. With one exception, activities and concentrations of ammonia-oxidizing bacteria decreased and increased in parallel.     

Detection and analysis of two serotypes of ammonia-oxidizing bacteria in sewage plants by flow cytometry

Two different serotypes of the genus Nitrosomonas were isolated from samples of the sewage plant Heidelberg. These nitrifiers were enumerated in activated sludge of various other sewage plants after immunofluorescent labeling and staining with propidium iodide by flow cytometry. The concentrations of these serotypes of Nitrosomonas spp. were in the range of 0.1 to 2%. Also, a test for the determination of the activity of ammonia-oxidizing bacteria was developed. Nitrite-oxidizing bacteria were specifically inhibited with sodium chlorate, and the activity of ammonia-oxidizing bacteria could be calculated from the increase of nitrite. Concentrations and activities of ammonia oxidizers were measured for a period of 6 months in the sewage plant Heidelberg. With one exception, activities and concentrations of ammonia-oxidizing bacteria decreased and increased in parallel.     

Heteroduplex mobility assay for the identification of Listeria sp and Listeria monocytogenes strains: application to characterisation of strains from sludge and food samples

One hundred and ten Listeria sp. isolates from sewage sludge were identified according to phenotypic and genotypic methods. The Listeria sp. strains isolated from five types of sludge from three sewage treatment plants in Angers (France) and the surrounding area included L. monocytogenes (55.5%), L. innocua (29.1%), L. seeligeri (13.6%) and L. welshimeri (1.8%). The majority of L. monocytogenes strains belonged to serotypes 4b, 1/2b and 1/2a. Moreover, a heteroduplex mobility assay based on the 16S rRNA sequences was tested for its ability to identify the six species of the genus Listeria. This study, performed on 283 Listeria sp. strains from human, food and sewage sludge samples, showed that all the species were distinguishable from one another. L. innocua and L. seeligeri showed respectively three and two distinct banding patterns. Within L. monocytogenes, four groups (I-IV) were defined. The majority of food and environmental isolates were clustered in group I and it is noteworthy that group IV clustered epidemiologic isolates and strains belonging to serotypes 4b, 1/2a and 1/2b.     

Enumeration of Aeromonas hydrophila from domestic wastewater treatment plants and surface waters

R. POFFÉ AND E. OP DE BEECK. 1991. Influents, effluents and sludges from sewage purification plants and surface water samples were examined quantitatively for Aeromonas hydrophila on the mA medium of Rippey and Cabelli. Between 10⁴ and 10⁶/ml A. hydrophila were found in domestic wastewaters. On the average 99.975% were removed by activated sludge and 98.25% by trickling filters. Only 20.9% of A. hydrophila end up in the primary sludge, which contained up to 10⁷/g dry sludge. After 3 months, anaerobically (methane) fermented and partially dried sludge from trickling filters contained more than 10⁶ A. hydrophila /g dry sludge. Surface water receiving raw sewage contained several hundreds of A. hydrophila /ml, comparable with the numbers found in effluent waters, while surface water receiving no municipal wastewater and destined for the preparation of drinking water contained only small and negligible numbers. It was concluded that A. hydrophila was omnipresent in surface water.     

城市河道污水中好氧反硝化菌的分离鉴定与特性

采用富集培养和BTB(溴百里酚蓝)平板法从城市河道污水中筛选、分离获得了一株高效的好氧反硝化菌株ADZ1, 48 h内对硝酸盐的降解率为93.1%, 总氮的去除率为34.7%。16S rRNA测序及系统发育分析结果表明该菌株属于Pseudamonas sp., 经VITEK? 2系统鉴定为Pseudomonas putida。对该菌株的反硝化特性进行了研究, 结果表明, 该菌株以乙醇为最佳碳源, 在碳氮比达到12:1时, 对硝酸盐的去除率达到98%以上, 总氮去除率达到41.3%。该菌株对溶解氧、pH有着广泛的适应性, 菌体活力强, 有着良好的应用前景。     

Identification and nearly full-length genome characterization of novel porcine bocaviruses

The genus bocavirus includes bovine parvovirus (BPV), minute virus of canines (MVC), and a group of human bocaviruses (HBoV1-4). Using sequence-independent single primer amplification (SISPA), a novel bocavirus group was discovered with high prevalence (12.59%) in piglet stool samples. Two nearly full-length genome sequences were obtained, which were approximately 5,100 nucleotides in length. Multiple alignments revealed that they share 28.7-56.8% DNA sequence identity with other members of Parvovirinae. Phylogenetic analyses indicated their closest neighbors were members of the genus bocavirus. The new viruses had a putative non-structural NP1 protein, which was unique to bocaviruses. They were provisionally named porcine bocavirus 1 and 2 (PBoV1, PBoV2). PBoV1 and PBoV2 shared 94.2% nucleotide identity in NS1 gene sequence, suggesting that they represented two different bocavirus species. Two additional samples (6V, 7V) were amplified for 2,407 bp and 2,434 bp products, respectively, including a partial NP1 gene and the complete VP1 gene; Phylogenetic analysis indicated that 6Vand 7V grouped with PBoV1 and PBoV2 in the genus of bocavirus, but were in the separate clusters. Like other parvoviruses, PBoV1, PBoV2, 6Vand 7V also contained a putative secretory phospholipase A(2) (sPLA(2)) motif in the VP1 unique region, with a conserved HDXXY motif in the catalytic center. The conserved motif YXGXF of the Ca(2+)-binding loop of sPLA2 identified in human bocavirus was also found in porcine bocavirus, which differs from the YXGXG motif carried by most other parvoviruses. The observation of PBoV and potentially other new bocavirus genus members may aid in molecular and functional characterization of the genus bocavirus.     

Transfer of Methanolobus siciliae to the genus Methanosarcina, naming it Methanosarcina siciliae, and emendation of the genus Methanosarcina

A sequence analysis of the 16S rRNA of Methanolobus siciliae T4/M(T) (T = type strain) showed that this strain is closely related to members of the genus Methanosarcina, especially Methanosarcina acetivorans C2A(T). Methanolobus siciliae T4/M(T) and HI350 were morphologically more similar to members of the genus Methanosarcina than to members of the genus Methanolobus in that they both formed massive cell aggregates with pseudosarcinae. Thus, we propose that Methanolobus siciliae should be transferred to the genus Methanosarcina as Methanosarcina siciliae.     

INDUCTION OF WOUND-VESSEL DIFFERENTIATION IN ISOLATED COLEUS STEM SEGMENTS IN VITRO

Excised internodes and 2-mm-thick transverse stem segments of Coleus blumei were incubated 7 days on media containing 2% sucrose, 1% agar, and various growth substances. Wound-vessel members differentiated in the 2-mm-thick tissue slices incubated on medium containing no exogenous auxin (control). Compared to control slices, the addition to the medium of either IAA (50 or 5 ppm), 2, 4-D (10, 1, or 0.1 ppm), TIBA (50, 5, or 0.5 ppm), or kinetin (50, 5, 0.5 or 0.05 ppm) inhibited wound-vessel differentiation. Simultaneous treatment of tissue slices with IAA and kinetin inhibited wound-vessel differentiation, as did the incubation of tissue slices on medium containing no sucrose. Low concentrations of IAA (0.05 ppm) or 2, 4-D (0.01 ppm) resulted in over a 100% increase in the numbers of wound-vessel members differentiated. These results are interpreted as indicating auxin synthesis by the tissue slices and the participation of auxin as a limiting factor in xylogenesis. The inhibition of wound-vessel differentiation by relatively high concentrations of 2,4-D, TIBA, or kinetin is interpreted as a reflection of the inhibition of polar auxin transport by these substances, and an indication that polar auxin transport enhances xylogenesis.     

Systematic significance of cytology in Cyananthus (Campanulaceae) endemic to the Sino-Himalayan region

Chromosome numbers and the morphology of members of 24 populations representing 15 species of the Sino-Himalayan endemic genus Cyananthus(Campanulaceae) were studied using karyological and numerical taxonomic techniques. The chromosome numbers of these taxa are 2n = 10, 12, 14, 24, 28, and the basic chromosome numbers for the genus are x = 5, 6, 7. All species except C. inflatus Hook. f. & Thoms. and C. microphyllus Edgew. were examined for the first time and a new ploidy level (tetraploidy) is reported in the genus. Chromosome measurement data were analyzed using cluster analysis. The relationships between three sections within Cyananthus and evolutionary trends within the genus are discussed in the light of karyological data. The cytological data suggest that Cyananthus is a relatively primitive genus in Campanulaceae and there is significant division within the genus, and polyploidization may have played an important role in the chromosome evolution and speciation of Cyananthus in the Himalayan–Hengduan Mountains.