Diets of deepwater oreos (Oreosomatidae) and orange roughy Hoplostethus atlanticus

The diets of black oreo Allocyttus niger, smooth oreo Pseudocyttus maculatus, spiky oreo Neocyttus rhomboidalis and orange roughy Hoplostethus atlanticus were determined from examination of contents of 240, 311, 76 and 415 non‐empty stomachs, from fishes sampled by bottom trawl on Chatham Rise to the east of South Island, New Zealand. Hoplostethus atlanticus had an opportunistic predatory strategy with a broad diet dominated by prawns and mesopelagic teleosts, but with substantial components of mysids and cephalopods. Pseudocyttus maculatus was strongly specialized on gelatinous zooplankton (jellyfish and salps). Allocyttus niger consumed mainly salps and hyperiid amphipods, and to a lesser extent fishes, prawns, mysids and copepods. Neocyttus rhomboidalis primarily consumed salps, along with mysids, euphausiids and fishes. Only P. maculatus did not exhibit significant ontogenetic variation in diet. The diets were also influenced by year and bottom depth. Differences in the distributions and diets of the four species probably reduce conflicts in resource use.     

Seasonal reproductive cycles in three commercially exploited fishes from the slope waters off New Zealand

Reproductive cycles were investigated in orange roughy, Hoplostethus atlanticus , smooth oreo, Pseudocyttus maculatus , and black oreo dory, Allocyttus sp., from mid-slope waters (600–1300 m) around New Zealand from 1982 to 1985. Orange roughly displayed a mid-winter spawning period in July and August, whereas both dory species spawned in November and December. In all three species, the timing of spawning was consistent from year to year. Ovarian development in orange roughy and black oreo dory was found to be synchronous, with a single clutch of oocytes being matured for each spawning season. In males, testes of a given macroscopic stage were dominated by a single gamete stage, supporting the existence of a brief rather than prolonged spawning period. The possible relationship of spawning period to seasonal changes in the productivity of the surface water is discussed.     

Vertical distribution and dietary preferences of deep-sea copepods (Euchaetidae and Aetideidae; Calanoida) in the vicinity of the Antarctic Polar Front

Four Paraeuchaeta species and three aetideids were frequently encountered along 51°30′S in the Atlantic sector of the Southern Ocean. Paraeuchaeta antarctica was most abundant close to the Antarctic Polar Front. Within the genera Paraeuchaeta and Gaetanus, congeners usually partitioned the water column. Euchaetidae had high lipid (≤37% dry mass, DM in adult females) and wax ester contents (≤22% DM). Fatty acid composition of Paraeuchaeta spp. was dominated by monounsaturated moieties, especially 16:1(n-7) and 18:1(n-9), while fatty alcohols were mainly saturated. Surprisingly, only the bathypelagic P. barbata contained moderate amounts of 20:1(n-9) and 22:1(n-11) fatty acids (≤14%) and high levels of the respective fatty alcohols (≤50%), generally considered trophic biomarkers for calanid copepods as prey. Thus, herbivorous calanid copepods seem to be a readily available prey source at bathypelagic depths, indicating that their seasonal vertical migration provides a “trophic shortcut” from primary production at the surface to the interior of the ocean. Aetideidae also contained substantial levels of total lipid (14–36% DM), but wax esters contributed only up to 12% DM in copepodite stages C5 of Gaetanus spp., whereas other stages of Gaetanus and Aetideopsis minor only contained ≤6% DM of wax esters. The fatty acid compositions of Aetideidae were more balanced with 16:0, 18:1(n-9), 20:5(n-3), and 22:6(n-3) as important components, indicating a generally omnivorous feeding behaviour.     

Seasonal changes in lipid content and composition of the polychaete Nereis (Hediste) diversicolor

The lipid content and composition of Nereis (Hediste) diversicolor O. F. Müller (Annelida, Polychaeta, Nereidae) a mud-dwelling, intertidal errant polychaete in the Tagus estuary (Portugal), were examined on the monthly basis by lipid extraction, TLC and capillary GC. In this estuary, N. diversicolor is by far the dominant species among polychaeta and the main food item in the natural diet of several flatfishes. The biochemical elucidation of its lipid structure and distribution throughout the year, described in this study, provides information not only about the physiological role of lipids in the animal under consideration but also about dietary fatty acid requirements of some flatfishes in the wild and under laboratory conditions.The total lipid content varied between a maximum of 19.3% lyophilized dry weight in February (4.4% fresh weight) and a minimum of 6.6% in August (1.9% fresh weight). The major lipid classes were triacylglycerol, phospholipid, free sterol, free fatty acid, sterol ester/wax ester and alkyldiacylglycerol.The fatty acid composition was rather unsaturated with a 1:2 mean ratio of n-3: n-6. The major fatty acids were C160:0, C18:1n-9, C18:2n-6, and C20:5n-3; there were smaller amounts of C180:0, C18:1n-11, C18:1n-7, C18:3n-3, C20:1, C20:2n-6, C20:4n-6, C22:2, C22:5n-3, and many other fatty acids were detected at trace levels. The unsaturation ranged from 36.9 mg/g dry weight in summer to 107.4 mg/g in winter. An accumulation of fatty acids from plant origin was evident, in particular linoleic acid (C18:2n-6), which was quantitatively one of the major fatty acids throughout the year.     

Morphometric analysis of orange roughy (Hoplostethus atlanticus) off the continental slope of southern Australia

Morphometric variation was used to examine the stock structure, in southern Australian waters, of the deepwater marine teleost Hoplostethus atlanticus , orange roughy. Seven samples were collected from non-spawning aggregations in 1989–1990. Three samples were also collected in the winter of 1992, two from the main spawning site off the eastern coast of Tasmania (St Helens), and the third from the other main fishing ground south of Tasmania. The 38 morphometric measurements taken from each of over 1300 fish were size-standardized by an allometric formula and analysed by univariate and multivariate statistics. The results indicate significant variation in the morphology of orange roughy caught from geographically distinct aggregations. They further suggest that the main spawning aggregation may consist of fish from different groups at different times of the spawning period. There appear to be at least seven morphologically distinguishable stocks of orange roughy in southern Australian waters, despite genetic data indicating appreciable levels of gene flow between them.     

Evaluation of extraction methods for recovery of fatty acids from Botryococcus braunii LB 572 and Synechocystis sp. PCC 6803

Microalgae are a very diverse group of organisms that consist in both prokaryotic and eukaryotic forms. Some species of microalgae can be induced to overproduce particular fatty acids through simple manipulations of the physical and chemical properties of the culture medium. In this paper, the effect of different extraction techniques on the recovery of fatty acids from the freeze-dried biomass from two lipid-producing microalgal strains: Botryococcus braunii LB 572 (green algae) and Synechocystis sp. PCC 6803 (cyanobacteria) was examined. Five procedures were used: after conversion of the lipid material into the corresponding fatty acid methyl esters (FAMEs) via suitable derivatization reactions (extraction-transesterification) and direct transesterification of biomass to produce FAMEs (without the initial extraction step) that used differential types of catalysts and processing conditions. This study has shown that procedure 3, a one step practical procedure for lipid extraction and in situ methyl ester derivation could be used successfully for the determination of the fatty acid compositions of microalgae and cyanobacteria.     

Submersed Culture Production of Extracellular Wax Esters by the Marine Bacterium <Emphasis Type="Italic">Fundibacter jadensis</Emphasis>

Fundibacter jadensis strain T9, a marine gram-negative bacterium, was isolated from the intertidal sediment of the German North Sea coast by our group. The cells were able to produce considerable amounts of extracellular wax esters when cultivated with n-alkanes (hexadecane or tetradecane) as a carbon source. The dependence of wax ester production and the composition of the purified wax on different culture conditions (C:N:P ratio and dissolved oxygen tension) were tested. Our results show that wax ester production was not directly growth-linked. The C:N:P ratio had no significant influence on the yield of alkane-free purified wax. The dissolved oxygen tension affected the produced amount of the alkane-free purified wax and the composition of the purified wax; when lower than 2% it decreased the yield of purified wax and led to an altered wax ester composition. Tetradecane as a carbon source enhanced the spectrum of the wax ester composition.     

Comparative life histories in the genera Calanus and Neocalanus in high latitudes of the northern hemisphere

At least nine species of Calanidae occupy the area of interest, four in the Atlantic and five in the Pacific. All store wax esters and probably can undergo diapause. Latitudinally overlapping or onshore — offshore associations of two or more species occur in both oceans. Interzonals, with reduced mouth parts in the adult female, are endemic to the Pacific subarctic gyre where their life cycles are completed in one year. Presumably its nearly closed circulation and environmental stability have favored the evolution of endemic species well adapted to those conditions. Lack of ice- and/or salinity-induced stability also limits blooms there. The sub-arctic Atlantic contains several smaller oceanographic features, open to both arctic and Atlantic influences and populated by species of different origins, arctic species can behave as interzonals but may also require two or more years to complete their life cycles. Females may need to feed one year to reproduce the next and therefore they retain functional mouthparts. In some places in the North Atlantic, blooms may start in the sub-ice zone and seed the remaining euphotic zone. There the earliest stages of some the Calanus species can develop close to the ice, using primarily ice algae as food, while the remaining stages are adapted to utilize brief periods of intense primary production in the water column. Salinity-induced stability and shallow water favor blooms in the boundary waters of both oceans, which may be of greater importance in the Atlantic because of the proportionally greater area of continental shelf there. In both oceans the smaller species of Calanidae can produce up to three generations per year.     

Wax esters of different compositions produced via engineering of leaf chloroplast metabolism in Nicotiana benthamiana

In a future bio-based economy, renewable sources for lipid compounds at attractive cost are needed for applications where today petrochemical derivatives are dominating. Wax esters and fatty alcohols provide diverse industrial uses, such as in lubricant and surfactant production. In this study, chloroplast metabolism was engineered to divert intermediates from de novo fatty acid biosynthesis to wax ester synthesis. To accomplish this, chloroplast targeted fatty acyl reductases (FAR) and wax ester synthases (WS) were transiently expressed in Nicotiana benthamiana leaves. Wax esters of different qualities and quantities were produced providing insights to the properties and interaction of the individual enzymes used. In particular, a phytyl ester synthase was found to be a premium candidate for medium chain wax ester synthesis. Catalytic activities of FAR and WS were also expressed as a fusion protein and determined functionally equivalent to the expression of individual enzymes for wax ester synthesis in chloroplasts.     

Lipid content and fatty acid distribution in tissues from Portuguese dogfish, leafscale gulper shark and black dogfish

The lipid characterization in tissues from the three deep-sea sharks leafscale gulper shark (Centrophorus squamosus), Portuguese dogfish (Centroscymnus coelolepis) and black dogfish (Centrocyllium fabricii) captured at Hatton Bank in the North Atlantic were examined. The objective was to determine the lipid content and the fatty acid composition in different tissues. In addition, the fatty acid composition in tissues and species was compared. The tissues examined were pancreas, heart, kidney, stomach, spleen and liver. The lipid content was high in liver (40–50%) and ranged from 1% to 5% in the other tissues. The dominant fatty acids were C16:0, C18:1 (n-9), C18:1 (n-7) and C22:6 (n-3) in all tissues. All tissues had a high content of unsaturated fatty acids.     

Paramoeba: A Common Marine Genus

Amoebae of the genus Paramoeba Schaudinn, 1896, have been found in British waters, further attesting to the wide distribution and common occurrence of these unusually interesting marine protozoa. The British strains belong to the species P. pemaquidensis Page, 1970, first described from the Atlantic coast of North America. The Nebenkörper appears to be characteristic of a morphologically and systematically homogeneous group of amoebae.     

Lipid extracts from different algal species:1H and13C-NMR spectroscopic studies as a new tool to screen differences in the composition of fatty acids,sterols and carotenoids

One- and two-dimensional¹H- and¹³C-NMR spectra of lipid extracts fromUlva rigida, Gracilaria longa, Fucus virsoides andCodium tomentosum collected in the northern Adriatic Sea allowed screening of the content of fatty acid chains, carotenoids, free and acylated cholesterol and chlorophylls. The carotenoid-to-polyunsaturated fatty acid molar ratio was taken as a comparison parameter in samples ofUlva rigida collected in differentloci and seasons; the value was markedly higher in samples from the Lagoon of Venice than from marine coastal waters. The total cholesterol concentration was evaluated by¹H-NMR spectroscopy and similar values were found for all species. Two-dimensional heterocorrelated NMR spectroscopy was shown to give characteristic fingerprints of the lipid extracts from algal samples as regards the content in chlorophylls, unsaturated fatty acids and carotenoids.author for correspondence     

Lipids in the daubed shanny (Teleostei: Leptoclinus maculatus) in Svalbard waters

The daubed shanny, Leptoclinus maculatus, is a common fish species in Arctic and North Atlantic waters and has an important role in high-latitude ecosystems as a link between lower trophic levels and many fish, marine mammal and seabird species. Its biology and ecology have, however, remained largely unstudied. The primary aim of this study was to increase the knowledge about the daubed shanny by analysing total lipids, lipid-classes and the fatty acid composition of liver, muscle and female gonads in adults from the high Arctic archipelago of Svalbard. In female gonads, the triacylglycerols and wax esters in addition to cholesterol esters were dominant among the stored lipids. Triacylglycerols dominated in the liver, whereas structural lipids, such as phospholipids and cholesterols, were the most important lipids in muscles. Phosphatidylcholine and phosphatidylethanolamine were major phospholipids in all organs studied. The fatty acid spectrum of the investigated organs was characterized by a high amount of monounsaturated fatty acids, particularly in the liver. Polyunsaturated fatty acids, particularly 22:6(n-3) and 20:4(n-6), were prevalent in muscle tissues. The lipid and fatty acid spectra in the organs during this period of life are tightly connected with the activation of the liver metabolism and the storage of lipids in the developed female gonads. Lipid accumulation and distribution in gonads are transferred to optimal development of embryos and larvae in Arctic waters.     

Fecundity and Maturity of Orange Roughy (Hoplostethus atlanticus Collett 1889) on the Porcupine Bank, Northeast Atlantic

Synopsis The first, comprehensive analysis of the fecundity and reproductive maturity of orange roughy, Hoplostethus atlanticus, from a specific area in the Northeast Atlantic is reported. Specimens were collected from aboard vessels, targeting this species on the Porcupine Bank (ICES subarea VII), in waters of between 1400 m and 1,650 m depth. Between September and December 2002, a non-random, stratified, sampling protocol was implemented by on board fisheries biologists to collect mature female fish between 300 mm and 540 mm SL. Ovaries from 65 individuals, representing the majority of 10 mm SL size classes, formed the analytical sample. A novel, digital method of oocyte counting was developed, allowing digital images of oocytes to be annotated, counted and stored. Total fecundity ranged between 20,352 and 244,578 oocytes per female and mean total fecundity was estimated to be 97,368 oocytes per female (SD = 48,322). Relative fecundity was estimated to be 33,376 oocytes per kg (SD = 11,407). Fecundity was shown not to decrease with age. Macroscopic analyses showed that 50% of females were not mature until they reached 27.5 years and 37 cm SL. Comparison with stocks from the southern hemisphere indicate that orange roughy from the Northeast Atlantic mature at a larger size and generally have a higher mean fecundity than those found in the southern hemisphere. This may reflect differences in growth rates influenced by environmental variables and fishing pressure.     

New species in the genus <Emphasis Type="Italic">Francisella</Emphasis> (Gammaproteobacteria; Francisellaceae); <Emphasis Type="Italic">Francisella piscicida</Emphasis> sp. nov. isolated from cod (<Emphasis Type="Italic">Gadus morhua</Emphasis>)

A Francisella strain, GM2212, previously isolated from moribund farmed Atlantic cod (Gadus morhua) in Norway, is closely related to Francisella philomiragia among Francisella spp. according to its complete 16S rDNA, 16S-23S intergenic spacer, 23S rDNA, 23S–5S intergenic spacer, 5S rDNA, FopA, lipoprotein TUL4 (LpnA), malate dehydrogenase and hypothetical lipoprotein (LpnB) sequences. A comparison between GM2212 and the type strain of Francisella philomiragia were performed by DNA–DNA hybridization and fatty acid analysis. The DNA–DNA hybridization showed a 70% similarity. The fatty acid analysis showed only minor differences between the Francisella isolates. Due to the inconclusive result from the DNA–DNA hybridisation, major emphasis concerning the status of this isolate is made on previously published molecular, phenotypic and biochemical characters. All characteristics taken together support the establishment of GM2212 as a novel species, for which the name Francisella piscicida sp. nov. is proposed (=CNCM I-3511^T = DSM 18777^T = LMG registration number not yet available).     

Observations on the morphology of some North American nemertines with consequent taxonomic changes and a reassessment of the architectonics of the phylum

A majority of the nemertine species from the western North Atlantic were originally described from life in the nineteenth century. Many of these were established by A. E. Verrill who had ‘an eye for species’ no matter which phylum he was working with, and thus when living nemertines which he described are encountered, they can usually be recognized. The morphology of most of these species has never been reported; some may prove to be species described earlier from the eastern North Atlantic. Morphological observations on the nemertine species from the North East coast of the Pacific are inadequate and have prevented satisfactory comparison with species from Japan and eastern Russia. The morphology of some species collected in the Gulf of Maine and from Cape Cod, as well as a re-examination of some of the slides of type specimens of species from the west coast of North America, indicates that their generic placement must be re-examined. The architectonic plan of the heteronemertines postulated over 100 years ago can not be substantiated and is redescribed. Three new heteronemertean genera are described: Tenuilineus gen.n. Parvicirrus gen.n., Tarrhomyos gen.n.     

Senecella siberica n. sp. and the position of the genus Senecella in Calanoida classification

Senecella calanoides Juday has been reported from fresh-water lakes of North America, Northern Siberia and inshore brackish waters of Kara and Laptev Seas. Investigation of 11 females and 2 males from the brackish waters of Neelov Bay (Laptev Sea) shows that second species, Senecella siberica sp. n., can be distinguished from S. Calanoides Juday by the greater size, a slightly asymmetrical female genital segment, the 3 external spines on the 3d exopod of 2 to 4th swimming legs and by more longer left endopod digitiform process of the male 5th legs. S. siberica seems to be brackish-water euryhaline species, inhabiting brackish waters with salinity from 1 to 22. The genus belongs to the family Aetideidae and is the only genus with freshwater representatives.     

Synthesis in vitro of very long chain fatty acids in Vibrio sp. strain ABE-1

The activity of fatty acid synthetase (FAS) from Vibrio sp. strain ABE-1 required the presence of acyl carrier protein and was completely inhibited by thiolactomycin, an inhibitor specific for a type II FAS. These observations indicate that this enzyme is a type II FAS. Analysis by gas-liquid chromotography of the reaction products synthesized in vitro from [2-¹⁴C]malonyl-CoA by the partially purified FAS revealed, in addition to 16-and 18-carbon fatty acids which are normal constituents of this bacterium, the presence of fatty acids with very long chains. These fatty acids were identified as saturated and mono-unsaturated fatty acids with 20 up to as many as 30 carbon atoms. The longest fatty acids normally found in this bacterium contain 18-carbon atoms. These results suggest that the FAS from Vibrio sp. strain ABE-1 has potentially the ability to synthesize fatty acids with very long chains.Abbreviations ACP acyl carrier protein - FAME fatty acid methyl ester - FAS fatty acid synthetase - FID flame ionization detection - GLC gas-liquid chromatography - TLC thin-layer chromatography - In designations of fatty acids, such as 16:0, 16:1, etc the colon separates the number that denotes the number of carbon atoms and the number that denotes the number of double bonds, respectively, in the molecule - 16:0-CoA CoA ester of 16:0