Sapindales: molecular delimitation and infraordinal groups

An analysis of rbcL sequence data for representatives of families of putative sapindalean/rutalean affinity identified a robust clade of core “sapindalean” taxa that is sister to representatives of Malvales. The constitution of this clade approximates the broad concept of Sapindales (sensu Cronquist). Five lineages within the order are recognized: a “rutaceae” clade (Rutaceae, Cneoraceae, Ptaeroxylaceae, Simaroubaceae sensu stricto, and Meliaceae); a “sapindaceae” clade (Sapindaceae, Aceraceae, and Hippocastenaceae); Anacardiaceae plus Burseraceae; Kirkiaceae; and Zygophyllaceae pro parte. Relationships among these groups were only weakly resolved, but there was no support for the recognition of the two more narrowly defined orders, Rutales and Sapindales sensu stricto. Several families that have previously been allied to Sapindales or Rutales show no affinity to the core sapindalean taxa identified with the molecular data, and are excluded from the order: viz. Akaniaceae, Bretschneideraceae, Conneraceae, Coriariaceae, Melianthaceae, Meliosmaceae, Physenaceae, Rhabdodrendraceae, Sabiaceae, Staphyleaceae, Stylobasiaceae, Surianaceae, and Zygophyllaceae sensu stricto.     

Evolution of quassinoids and limonoids in the rutales

The structural types of quassinoids and limonoids can be characterized in terms of complexity according to their skeletal specialization and state of oxidation. The analysis of such dynamic parameters in the quassinoid-limonoid group of families in the Rutales indicates that the Simaroubaceae should form the more primitive taxon, split off from the common ancestral lineage before synthesis of the liminoid precursor. Meliaceae explore limonoid chemistry along several short biosynthetic pathways. One of these pathways is further developed in Rutaceae and another one in Cneoraceae.     

Embryology of Harrisonia (Cneoroideae,Rutaceae): a comparison with related genera and families

Harrisonia, a genus of three or more species distributed from tropical Africa and Southeast Asia to northern Australia, has long been considered a member of Simaroubaceae. Recent molecular analyses, however, have shown that the genus is assigned to subfamily Cneoroideae of Rutaceae, in which Cneoroideae (eight genera) are sister to the remainder of the family (‘core Rutaceae’). Here, we report embryological features of Harrisonia based on published and newly obtained data and provide morphological corroboration for the molecular affinities of the genus and Cneoroideae. We compared its embryological features with those of seven other genera of Cneoroideae and with those of the core Rutaceae and related families (Meliaceae, Simaroubaceae and Sapindaceae). Comparisons showed that Harrisonia fits within Cneoroideae through possessing campylotropous seeds with a multi‐cell‐layered endotesta. Embryological evidence, like molecular evidence, further shows that, in Cneoroideae, Harrisonia probably has affinities to a group of Bottegoa, Cedrelopsis, Cneorum and Ptaeroxylon by sharing a micropyle formed by the inner integument alone and solitary oil cells in the testa. Except for Harrisonia, Cneoroideae are still poorly understood embryologically and further investigations are needed.     

Molecular analyses suggest a need for a significant rearrangement of Rutaceae subfamilies and a minor reassessment of species relationships withinFlindersia

DNA sequencing has been used to construct two molecular phylogenies at the intrafamily and intrageneric level within the Rutaceae. Analysis oftrnL-trnF sequence data for five Rutaceae subfamilies has shown that there is no molecular support for the current subfamily classifications within the Rutaceae. The Dictyolomatoideae and Spathelioideae belong to a clade separate from the clades containing the remaining Rutaceae subfamilies. Rutoideae and Citroideae do not form discrete clades which suggests a reassessment of the subfamily classification is necessary, particularly asRuta falls within the majority Citroideae clade. Flindersioideae forms a clade within the Rutaceae and does not form a separate family or form a clade with Meliaceae.Sequencing of 17Flindersia species produces a similar phylogeny to that proposed by other authors using morphological methods with two exceptions. The molecular phylogeny indicatesF. amboinensis is associated withF. fournieri andF. laevicarpa and, in addition,F. oppositifolia andF. pimenteliana were found to be genetically identical.     

The familial and subfamilial relationships ofApocynaceae andAsclepiadaceae evaluated withrbcL data

Sequence data for therbcL gene from twenty-four taxa of the familiesApocynaceae andAsclepiadaceae were cladistically analysed in order to evaluate the existing familial and subfamilial classification. The taxa sampled represent all described subfamilies and a majority of the described tribes. The cladistic analysis shows that theAsclepiadaceae are nested within theApocynaceae. An amalgamation of the two families is therefore recommended. The subfamilial classification is also in need of revision: the subfamiliesPlumerioideae andApocynoideae of the current classifications are paraphyletic, as are many of the tribes. Potential subfamily candidates and characters traditionally used in the classification are discussed.     

Simaroubaceae,an artificial construct: evidence from rbcL sequence variation

Phylogenetic analyses of rbcL sequence data of representatives of all subfamilies indicate that Simaroubaceae sensu lato is polyphyletic. It represents at least five separate lineages, only three of which (Simarouboideae, Harrisonia, and Kirkioideae) cluster within a robust sapindalean clade. The family is monophyletic only when comprised of members of the subfamily Simarouboideae plus Leitneriaceae, but excluding Harrisonia. Harrisonia is most closely related to Cneorum and Rutaceae. Kirkioideae is distant from Simaroubaceae sensu stricto, although its affinities remain within Sapindales. The other two lineages show an affinity to taxa at some distance from Sapindales: lrvingia with a group of poorly sampled rosid I taxa comprising in part members of Linales and Malphigiales; Picramnia and Alvaradoa cluster together in an isolated position between the broadly comprised groups of rosid I and rosid II. Support for the affinities suggested here is also evident in nonmolecular data sources: wood anatomy, pericarp structure, pollen, and phytochemistry. The elevation of the picramnioid clade, comprising Picramnia and Alvaradoa, to family rank is signaled, and the recognition of Kirkiaceae and Irvingiaceae is substantiated.     

Les Cneoraceae (Rutales): Étude Taxonomique,Palynologique et Systématique

Après avoir revu l'ensemble des caractères morphologiques, anatomiques, caryologiques, embryologiques, phytochimiques, sérologiques et palynologiques les auteurs concluent à la nécessité de séparer les deux genres Cneorum et Neochamaelea et de rattacher la famille aux Rutales. Par l'étude détaillée des caractères du pollen, ils montrent également que l'ultrastructure de l'exine est identique dans les deux genres, bien que l'ornementation et le nombre des apertures soient différents. Le type pollinique des Cneoraceae est comparable à celui des Rutaceae, Simaroubaceae et vient étayer l'opinion fréquemment admise que la famille appartient à l'ordre des Rutales.     

Citrus limonoid by-products as insect control agents

Limonoids are a group of chemically related bitter tetranortriterpene derivatives found predominantly in Rutaceae and Meliaceae plants (Ourison et al., 1964). Interest in the Rutaceae limonoids has centered around limonoid removal from consumable citrus products. For example, bitterness in citrus juices (as well as in other citrus products) due to limonoids has become an increasingly serious economic problem (Wilson & Crutchfield, 1968; Sinclair, 1972). Interest in the Meliaceae limonoids, on the other hand, has centered on their efficacy as pest control and/or antitumor agents (Kubo & Klocke, 1981, 1982; Nakanishi, 1977, 1980). For example, azadirachtin, isolated from several Meliaceae trees, has proven to be a potent natural product against a myriad of insect and nematode pests (Warthen, 1979). In fact, we have isolated azadirachtin from the fresh fruit of Azadirachta indica as a potent insect ecdysis inhibitor against four agricultural pest insects with artificial diet feeding assay (Kubo & Klocke, in litt).     

Contribution of molecular cladistics to the taxonomy of Rutaceae in China*

The treatment of Rutaceae in the Chinese flora chose to follow Engler in recognizing Rutoideae and Toddalioideae as two separate subfamilies. Morphological and chemical comparisons, however, suggested grouping those two subfamilies in one subfamily, Rutoideae. This move has received support from molecular phylogenetic analyses, which also showed that the Chinese taxa in Euodia should be placed in Tetradium and Melicope following Hartley. Investigations into the chemistry and molecular phylogeny of Murraya also indicated that the species in the section Bergera without yuehchukene should be removed from Murraya. These findings clearly show the value of molecular cladistics to the taxonomy of Rutaceae in China and also directions for further investigations.     

A study of the systematics of cyprinid fishes by two-dimensional gel electrophoresis

This study was carried out to shed light on confused subfamilial groupings in the Cyprinidae from the biochemical viewpoint at the molecular level, specifically by using two-dimensional gel electrophoresis of liver proteins. Six pairs of cypriniform fishes, which are different from one another at familial, subfamilial, generic, specific, subspecific, and individual levels, were compared. The genetic distances between pairs of fishes increased as taxonomic ranks of the pairs became higher, confirming the reliable usefulness of this technique. Four species representing the different subfamilies, Cyprininae, Gobioninae, Acheilognathinae, and Leuciscinae, were compared to give new insight into relationships at the subfamilial level. Cyprinus carpio (Cyprininae) and Pseudogobio esocinus esocinus (Gobioninae) gave the smallest genetic distance and the largest values were obtained between either one of the above species and Acheilognathus melanogaster (Acheilognathinae), suggesting that the former two subfamilies compose the most closely related group that is in turn distantly related to Acheilognathinae. Tribolodon hakonensis (Leuciscinae) had almost equal genetic distances to the three other species.     

Phytotoxicity of alkaloids,coumarins and flavonoids isolated from 11 species belonging to the Rutaceae and Meliaceae families

Meliaceae and Rutaceae families are known for the high diversity of their secondary metabolites, which include many groups that represent a rich source of structural diversity, and are good candidates as sources of allelochemicals that could be useful in agriculture. In the work described here the bioactivity profiles were evaluated for 3 alkaloids (1–3), 12 coumarins (4–15), 2 phenylpropanoic acid derivatives (16 and 17) and 14 flavonoids (18–31) from 11 species belonging to the Meliaceae and Rutaceae families. All compounds were tested in the wheat coleoptile bioassay and those that showed the highest activities were tested on the STS (Standard Target Species) Lepidium sativum (cress), Lactuca sativa (lettuce), Lycopersicon esculentum (tomato), and Allium cepa (onion).Most of the isolated compounds showed phytotoxic activity and graveoline (3), psoralen (8), and flavone (18) were the most active, with bioactivity levels similar to that of the commercial herbicide Logran^®. The results indicate that these compounds could be involved as semiochemicals in the allelopathic interactions of these plant species.     

Jaw morphology and function in living and fossil old world monkeys

This allometric investigation on a sample of 29 cercopithecine and 22 colobine taxa augments the data and implications of prior work on subfamilial variation in mandibular form and function in recent Cercopithecidae. To increase the size range encompassed by living cercopithecines and colobines, I included many of the larger-bodied fossil specimens. These analyses serve to fill a gap in our understanding of size-related changes in masticatory function and symphyseal morphology and curvature in extant and extinct Old World monkeys. Results of subfamilial scaling comparisons indicate that for a given jaw length, colobines possess significantly more robust corpora and symphyses than those of cercopithecines, especially at smaller sizes. Following from previous work, the most plausible explanation for why the subfamilies differ in relative corporeal and symphyseal dimensions is that colobine mandibles experience elevated loads and greater repetitive loading during mastication due, on average, to processing a diet of tough leaves and/or seeds. Although colobines have relatively larger symphyses, subfamilial analyses of symphyseal curvature demonstrate that they evince less symphyseal curvature vis-à-vis cercopithecines of a common size. Moreover, both subfamilies exhibit similar allometric changes in the degree of curvature, such that larger-bodied Old World monkeys have more curved symphyses than those of smaller taxa. Subfamilial scaling analyses also indicate that colobines possess a shorter M2 bite-point length relative to masseter lever-arm length, but not versus temporalis lever-arm length. Thus, as compared to cercopithecines, colobines can recruit less masseter-muscle force to produce similar bite forces during mastication. In both clades, M² bite-point length scales with positive allometry relative to masseter lever-arm length, such that larger species are less efficient at generating molar bite forces. This seems especially important due to the lack of subfamily difference in M² bite-point:temporalis lever-arm scaling (which is isometric across cercopithecids). A consideration of extinct cercopithecids indicates that many of the large-bodied papionins have more robust corpora, due perhaps to a diet which was of similar toughness to that of extant and extinct colobines. However, the biomechanical arrangements of the masseter and temporalis in all but one fossil cercopithecine and all of the fossil colobine specimens are much as predicted for a subfamilial member of its skull size. That most large-bodied papionins with tougher diets nonetheless maintain a less efficient jaw-muscle configuration may be due to stronger offsetting selection for increased relative canine size and gape.     

Biflavonyls and the affinities of Blepharocarya

An analysis of fruit and/or leaf biflavonyls from the genus Blepharocarya and representatives of Burseraceae, Simaroubaceae, Meliaceae and Anacardiaceae strongly supports a close affinity of the genus with the Anacardiaceae, and in particular with the tribe Rhoeae.     

A molecular phylogeny of the checkered beetles and a description of Epiclininae a new subfamily (Coleoptera: Cleroidea: Cleridae)

We provide the first molecular phylogeny of the clerid lineage (Coleoptera: Cleridae, Thanerocleridae) within the superfamily Cleroidea to examine the two most recently proposed hypotheses of higher level classification. Phylogenetic relationships of checkered beetles were inferred from approximately ～5000 nt of both nuclear and mitochondrial rDNA (28S, 16S and 12S) and the mitochondrial protein‐coding gene COI. A worldwide sample of ～70 genera representing almost a quarter of generic diversity of the clerid lineage was included and phylogenies were reconstructed using Bayesian and Maximum Likelihood approaches. Results support the monophyly of many proposed subfamilies but were not entirely congruent with either current classification system. The subfamilial relationships within the Cleridae are resolved with support for three main lineages. Tillinae are supported as the sister group to all other subfamilies within the Cleridae, whereas Thaneroclerinae, Korynetinae and a new subfamily formally described here, Epiclininae subf.n ., form a sister group to Clerinae + Hydnocerinae.     

Systematic revision of Entomobryidae (Collembola) by integrating molecular and new morphological evidence

Entomobryidae, the largest collembolan family, is traditionally classified at suprageneric level using a limited set of morphological structures, such as scales, antennal segmentation. Most tribal and subfamilial delimitations appear, however, disputable in the light of recent works. Integrating molecular and morphological evidence, we propose here a revision of the systematics of the family. In addition to traditional taxonomic characters, tergal specialized chaetae (S‐chaetae) are newly introduced, and their patterns are shown to be diversified at all levels from species to subfamilies. S‐chaetotaxic pattern on phylogenetic tree shows that evolution of S‐chaetae is not parallel between the different terga and that their patterns coincide well with the known molecular phylogeny, providing a powerful tool for the systematics of Entomobryidae. Orchesellinae sensu Soto‐Adames et al. (Annals of the Entomological Society of America, 101, 2008, 501); is divided into three subfamilies: Orchesellinae s. s., Bessoniellinae and Heteromurinae, the latter two upgraded from the original tribal level. Entomobryinae sensu Szeptycki (Morpho‐Systematic Studies on Collembola. IV. Chaetotaxy of the Entomobryidae and its Phylogenetical Significance, 1979), is no longer divided into scaled and unscaled tribes, and Lepidosira‐group is transferred from Seirinae to Entomobryinae. A key to subfamilies and tribes and a comparison with previous classifications of the Entomobryidae are provided. This study greatly improves the understanding of primary and secondary characters and erects the fundamental framework for the taxonomy of Entomobryidae.