新疆胡颓子属三种植物的花粉形态及其分类学意义

该文采用主成分分析和聚类分析方法,运用扫描电镜对新疆胡颓子属(Elaeagnus Linn.)落叶组大果沙(E. moorcroftii)、尖果沙枣(E. oxycarpa)和沙枣(E. angustifolia)共计18个样品的花粉形态进行了观察和研究;全面描述了新疆胡颓子属3个种花粉的极轴长、赤道轴长、极面观、赤道面观、孔沟形态和外壁纹饰等形态特点,并对其进行数据分析,通过对聚类结果的比较,讨论不同孢粉学特征对分类结果的影响。结果表明：(1)3个种的花粉均为中等大小;萌发孔类型均为三孔沟型。(2)花粉极面观形状从三角形、钝三角形到圆三角形;赤道面观形状从菱角形、半圆形到扁圆形;外壁纹饰从皱波状到穴状。(3)以筛选出的5个反映花粉形态的主成分指标进行聚类,结果显示所选指标不能区分种;以代表花粉形态的极面观形态和赤道面观形态为指标进行聚类同样也无法区分3个种;以花粉粒大小为指标进行聚类发现,大果沙枣的花粉大小可以区别于其他2个种。研究表明除了大果沙枣花粉的大小,尖果沙枣和沙枣的花粉形态不宜直接应用于种的划分。该研究结果为新疆胡颓子属落叶组植物花粉的种间鉴定和品种划分以及进化关系的研究提供了孢粉学依据。     

Pollen grain morphology supports the taxonomical discrimination of Mediterranean oaks (Quercus,Fagaceae)

The exine architecture and some quantitative parameters (polar and equatorial axes and their ratio) of pollen grains allow a clear discrimination between groups of Mediterranean oak species. For the differentiation of species within groups only the quoted parameters prove useful.     

Pollenmorphologie Von Borago Officinalis L.

The pollen morphology of the 16 recognized species of the genus Asphodelus L. (Asphodelaceae) has been investigated by light and scanning electron microscopy. Four pollen types can be distinguished on the basis of variation in size of the polar, equatorial longitudinal and transverse axes, as well as in exine structure and sculpturing, which correlate with the subdivision of the genus into sections. Correlations between pollen size and some biological characters are made. Phylogenetic implications are suggested, and trends of pollen evolution in the genus are indicated.     

兔眼越桔(杜鹃花科)花粉形态——兼谈用极坐标测量四合体花粉的一种新方法

扫描电镜下,兔眼越桔花粉为四合体,外形为准四面体,中等大小,表面具不规则皱波状纹饰,并有多处凹陷。萌发孔沟多为3对(顶分体3条,侧分体各对应1条),以四面体几何中轴为中心,中心对称分布于四面体的3个侧面。萌发孔沟的长度、宽度、孔盖长与宽、孔盖的形状、突起的程度等,在个体间有差异,尤其是一些具有多处凹陷的花粉粒,可能是导致花粉萌发率不同的生态类型。用极坐标法描述四合体花粉的新方法可以表现其饱满度,比较传统上用极轴、赤道轴的长短表现花粉平面大小的方法,更加准确而直观。     

刺五加、无梗五加花粉的亚显微形态学研究

用扫描电子显微镜观察了刺五加和无梗五加花粉的亚显微形态特征。花粉粒的赤道面观呈近圆形,极面观呈三裂圆形,具三孔沟。无梗五加、刺五加雄株的花粉表面纹饰为网状;刺五加两性株的花粉的表面纹饰亦呈网状,但有些花粉网脊不连续。无梗五加的花粉粒大小为26.5μm×27.4μm;刺五加雄株的花粉粒大小为21.1μm×22.1μm;刺五加两性株的花粉粒大小约为21.6μm×23.9μm。研究结果表明,无梗五加和刺五加雄株花粉的亚显微形态特征支持传统的属级和种级水平的分类;刺五加两性株某些花粉粒亚显微形态的独特表现可能与其发育不正常有关。     

Pollen morphology of endemic species of the Gonospermum Less., Lugoa DC. and Tanacetum L. complex (Asteraceae: Anthemideae) in the Canary Islands (Spain), and its taxonomical implications

The pollen of nine endemic taxa of the Gonospermum Less., Lugoa DC. and Tanacetum L. complex and of T. parthenium L. (introduced species from the Canary Islands) was studied using light and scanning electron microscopy with the aim of extending the knowledge of their morphology and to investigate whether pollen morphology may help clarifying the controversial taxonomy of these taxa. Twenty six populations in the Canary Islands (Spain) were studied and the following parameters were measured: polar axis (P), equatorial diameter (E), polar exine thickness (Ex1), length (L) and thickness (A) of the spines in the meridional optical section, exine thickness at the centre of the mesocolpium in the interapertural area (Ex2) and distance between spines (De) in the equatorial optical section. The studies show that the pollen of the three genera is very similar regarding shape, apertures, and ornamentation, but may be distinguished by size and exine thickness.     

The Logical Basis for the use of Continuous Characters in Phylogenetic Systematics

It has been argued that continuous characteristics should be excluded from cladistic analysis for two reasons: because the data are considered inappropriate; and because the methods for the conversion of these data into codes are considered arbitrary. Metric data, however, fulfill the sole criterion for inclusion in phylogenetic analysis, the presence of homologous character states, and thus cannot be excluded as a class of data. The second line of reasoning, that coding methods are arbitrary, applies to gap and segment coding, but quantitative data can be coded in a nonarbitrary manner by means of tests of statistical significance. These procedures, which are both objective and repeatable, determine the probability that two taxa possess an homologous character state; that is, if they have inherited a particular central tendency and distribution of individual variates unchanged from a common ancestor. Thus, the application of statistical tests to quantitative data empirically detects the presence of evolu tionary change, the raw material of phylogenetic reconstruction.     

Bayesian estimation of ancestral character states on phylogenies

Biologists frequently attempt to infer the character states at ancestral nodes of a phylogeny from the distribution of traits observed in contemporary organisms. Because phylogenies are normally inferences from data, it is desirable to account for the uncertainty in estimates of the tree and its branch lengths when making inferences about ancestral states or other comparative parameters. Here we present a general Bayesian approach for testing comparative hypotheses across statistically justified samples of phylogenies, focusing on the specific issue of reconstructing ancestral states. The method uses Markov chain Monte Carlo techniques for sampling phylogenetic trees and for investigating the parameters of a statistical model of trait evolution. We describe how to combine information about the uncertainty of the phylogeny with uncertainty in the estimate of the ancestral state. Our approach does not constrain the sample of trees only to those that contain the ancestral node or nodes of interest, and we show how to reconstruct ancestral states of uncertain nodes using a most-recent-common-ancestor approach. We illustrate the methods with data on ribonuclease evolution in the Artiodactyla. Software implementing the methods (BayesMultiState) is available from the authors.     

三倍体丹参杂交种的花粉形态研究

三倍体丹参是以二倍体丹参为父本、人工染色体加倍的四倍体白花丹参为母本杂交选育的杂交种。为深入了解三倍体丹参花粉的特性,以及为三倍体种质利用提供孢粉学依据,该文以二倍体丹参为对照,研究了三倍体丹参杂交种花粉的形态变异规律。利用光学显微镜和扫描电镜对二倍体和三倍体丹参的花粉萌发沟、外壁纹饰、花粉粒形状等特征进行了显微和超微形态观察,综合进行了花粉形态差异比较,并对花粉大小和形状数据进行了差异显著性分析和正态检验。结果表明:(1)二倍体丹参为6沟花粉,三倍体花粉萌发沟有6沟和8沟两种类型,沟内疣状颗粒分布不匀,出现畸形萌发沟。(2)二倍体和三倍体花粉外壁均为网状雕纹。二倍体花粉网眼内具多个多边形穿孔,穿孔大; 6沟和8沟两种类型的三倍体花粉网眼无穿孔或仅有几个小穿孔,6沟和8沟花粉的外壁雕纹相同。(3)三倍体花粉的极轴长(P)和赤道宽(E)均值显著小于二倍体花粉,花粉大小呈偏正态分布,P*E的差异系数大于二倍体花粉,且有极值存在。三倍体和二倍体丹参的萌发沟和雕纹存在差异,而花粉形状差异不显著。综上结果表明三倍体丹参花粉在倍性效应和杂合性的双重影响下发生了形态变异,且有多种形态变化。     

The comparative pollen morphology of genera Matricaria L. and Tripleurospemum Sch. Bip. (Asteraceae) in Turkey

Pollen morphology of four Matricaria species and 28 Tripleurospermum species was investigated with light microscopies (LM) and scanning electron microscopies (SEM). Pollen slides were prepared using Wodehouse technique. Measurements were based on 20 or more pollen grains per specimen. For SEM studies, dried pollen grains were transferred on aluminum stubs and coated with gold for 4 min in a sputter-coater. The pollen grains of Matricaria and Tripleurospermum are radially symmetric and isopolar. The pollen grains of the Matricaria are oblate-spheroidal with the polar axes 16.6–31.2 μm and the equatorial axes 18.7–23.9 μm. Tripleurospermum is oblate-spheroidal, suboblate and prolate-spheroidal with the polar axes 15.6–32.2 μm and the equatorial axes 17.7-38.5 μm. The pollen grains of Tripleurospermum are operculate and tricolporate. Matricaria is operculate and usually tricolporate or rarely syncolporate, tricolpate and tetracolporate. The pollen grain of both taxa shows echinate ornamentation. The spines are commonly conical with a broadened base and a tapered apical portion. The spine length varies between 1.8–4 μm in Tripleurospermum and 2.3–3.3 μm in Matricaria. The width of spines varies between 2.8–4.6 μm in Tripleurospermum and 2.4–3.6 μm in Matricaria. Inter-spinal area shows granulate–perforate, reticulate–perforate, rugulate–perforate ornamentations and the tectum surrounding the spine base is micro perforate. Overall exine thickness ranges from 2.8 to 4.8 μm in Tripleurospermum, 3.6 to 5.2 μm in Matricaria. Intine is thicker under pores in Tripleurospermum (0.3–0.62 μm) than in Matricaria (0.6–0.8 μm). Inter-spinal ornamentations, pollen shape and the numbers of perforations at the spin base have been observed as important morphological characters.     

山小橘属 (芸香科) 花粉形态及其系统学意义

利用扫描电镜（SEM）对芸香科山小橘属（Glycosmis）12个分类群16个样品的花粉形态特征（包括花粉大小、萌发孔及外壁纹饰等）进行了观察研究,其中光叶山小橘（G.craibii var. glabra）、长果山小橘（G.erythrocarpa）、锈毛山小橘（G.esquirolii）、长叶山小橘（G.longifolia）、亮叶山小橘（G.lucida）、海南山小橘（G.montana）、少花山小橘（G.oligantha）、小花山小橘（G.parviflora）和华山小橘（G.pseudoracemos）等9个分类群的花粉形态为首次报道。结果表明,国产山小橘属植物的花粉均为单粒花粉,近球形或长球形,花粉大小范围为(15.90~23.92)×(14.56~22.00)μm,极面观为圆形、三裂圆形或近三角形,极轴与赤道轴比值（P/E）范围为1.03~1.31,均为3孔沟;根据花粉外壁纹饰可以将国产种类划分为条网状、复条网状、条纹-穿孔纹饰以及孔穴状纹饰等四种类型,其中小花山小橘不同来源花粉的外壁纹饰差异较大,至少存在5种类型：(1) 极面穴状,赤面条网状或穿孔,(2) 极面穴状,赤面均匀分布圆形穿孔,(3) 具复条网状,(4) 条网状兼具不规则小穿孔,(5) 条网状兼近圆形穿孔纹饰。研究发现山小橘属植物的花粉形态特征具有较高的多样性,为该属植物的分类及系统学研究提供了可用的孢粉学资料。     

MCMC for hidden Markov models incorporating aggregation of states and filtering

This paper is concerned with the statistical analysis of single ion channel records. Single channels are modelled by using hidden Markov models and a combination of Bayesian statistics and Markov chain Monte Carlo methods. The techniques presented here provide a straightforward generalization to those in Rosales et al. (2001, Biophys. J., 80, 1088–1103), allowing to consider constraints imposed by a gating mechanism such as the aggregation of states into classes. This paper also presents an extension that allows to consider correlated background noise and filtered data, extending the scope of the analysis toward real experimental conditions. The methods described here are based on a solid probabilistic basis and are less computationally intensive than alternative Bayesian treatments or frequentist approaches that consider correlated data.     

基于花粉形态数量分类的核果类系统关系研究

运用扫描电子显微镜(SEM)观察了李属、杏属、樱桃属和桃属的花粉形态,观察结果表明:核果类果树的花粉均为近扁球形,等极,辐射对称,极面观为三角形或钝三角形,赤面观均为椭圆形,花粉粒大小在各属间差异明显。核果类果树花粉属N3P4C5类型,3条孔沟沿极轴方向在赤道面上等间距环状分布,内孔位于沟的中央,完全独立于外壁,孔盖覆不规则的拟网状或脑纹状纹饰。供试核果类果树花粉的表面纹饰由平行条纹或不规则条脊及散落于条脊间的穿孔组成,各属间条脊的排列方式、宽窄、脊洼深浅及穿孔有无等性状上存在明显差异。根据花粉大小、表面纹饰及覆盖层穿孔等的一般演化规律,推测核果类果树由低到高的演化顺序为李属→杏属→樱桃属→桃属,并在聚类分析的基础上对属间亲缘关系进行了探讨,旨在为核果类系统关系的研究提供孢粉证据。     

Palynological study of the Venezuelan species of the genus <Emphasis Type="Italic">Hymenocallis</Emphasis> (Amaryllidaceae)

Pollen morphology and exine structure of the seven Hymenocallis Salisb. species present in Venezuela were investigated using scanning (SEM) and transmission (TEM) electron microscopy. Pollen grains of all species are monosulcate, heteropolar, with bilateral symmetry, oblate to peroblate, heterobrochate, semitectate-columellate, possess unequal tectal surfaces, and are clavate or baculate when viewed with TEM. They present two equatorial apexes. When observed under SEM their surfaces appear as granulate; however, it is evident from TEM that they are in fact constituted by pila. All the species possess very large pollen (ranging from 64 to 85 μm and from 125 to 155 μm for polar and equatorial axes, respectively), and no relationship was evident between pollen size and chromosome number. All the taxa are also very similar in relation to their pollen outline, ornamentation and internal structure, thus indicating that the genus is accurately delimited from the palynological point of view and that discrete characteristics can only be used in some cases to delimit individual species.     

Lower confidence bounds for prediction accuracy in high dimensions via AROHIL Monte Carlo

MOTIVATION: Implementation and development of statistical methods for high-dimensional data often require high-dimensional Monte Carlo simulations. Simulations are used to assess performance, evaluate robustness, and in some cases for implementation of algorithms. But simulation in high dimensions is often very complex, cumbersome and slow. As a result, performance evaluations are often limited, robustness minimally investigated and dissemination impeded by implementation challenges. This article presents a method for converting complex, slow high-dimensional Monte Carlo simulations into simpler, faster lower dimensional simulations. RESULTS: We implement the method by converting a previous Monte Carlo algorithm into this novel Monte Carlo, which we call AROHIL Monte Carlo. AROHIL Monte Carlo is shown to exactly or closely match pure Monte Carlo results in a number of examples. It is shown that computing time can be reduced by several orders of magnitude. The confidence bound method implemented using AROHIL outperforms the pure Monte Carlo method. Finally, the utility of the method is shown by application to a number of real microarray datasets.     

A model-based method for identifying species hybrids using multilocus genetic data

We present a statistical method for identifying species hybrids using data on multiple, unlinked markers. The method does not require that allele frequencies be known in the parental species nor that separate, pure samples of the parental species be available. The method is suitable for both markers with fixed allelic differences between the species and markers without fixed differences. The probability model used is one in which parentals and various classes of hybrids (F(1)'s, F(2)'s, and various backcrosses) form a mixture from which the sample is drawn. Using the framework of Bayesian model-based clustering allows us to compute, by Markov chain Monte Carlo, the posterior probability that each individual belongs to each of the distinct hybrid classes. We demonstrate the method on allozyme data from two species of hybridizing trout, as well as on two simulated data sets.     

Pollen Morphology of Hydrocotyloideae and Saniculoideae (Apiaceae) in China

Pollen grains of 30 species and 2 varieties from China, belonging to 5 genera (out of 36 species in 5 genera) of Hydrocotyloideae and Saniculoideae, were examined with light microscope and scanning electron microscope. 1.Six types of the pollen shape are recognized in Hydrocotyloideae and Saniculoideae from China, and their evolutionary trend is from rhomboidal→subspheroidal→ellipsoidal→subrectangular→superrectangular to equatorially-constricted. 2.Pollen grains of Hydrocotyloideae are mostly ellipsoidal with P / E ratio 1.07-1.6, the polar axis 22.5-46μm long, the equatorial axis 13.75-27.5μm long, and with the size index 21.1-31.8.They are angulapeturate in the great majority, and the exine sculpture is recticulate under SEM. Those of Saniculoideae are mostly superrectangular or rectangular, with P/E ratio 1.3-2.1, the polar axis 35-65μm long, the equatorial axis 17.5-42.5μm long, and with the size index 28.2-49.7. They are planaperturate in the great majority and the exine sculpture is striate-reticulate or cerebro-reticulate under SEM. Therefore, the latter might be more advanced than the former. 3.Pollen grains of Dickinsia Franch., endemic to China, are ellipsoidal,with P/E ratio 1.5,the polar axis 31.25-37.5μm long, the equatorial axis 20-25μm, and with the size index 27.81. They are angulaperturate, and the exine sculpture is cerebroid-reticulate under SEM. The genus is greatly similar to the members of Hydrocotyloideae in pollen morphology, which supports the treatment of the genus asa member of Hydrocotyloideae by Handel-Mazzetti (1933).     

Polarity, aperture condition and germination in pollen grains ofEphedra (Gnetales)

Pollen grain polarity, aperture condition and pollen tube formation were examined inEphedra americana, E. foliata, E. rupestris, E. distachya, andE. fragilis using LM, SEM and TEM. In the characteristic oblate pollen, as seen in situ in the tetrad configuration, the polar axis is the minor one and the equatorial plane runs between the two narrow ends of the microspore. The intine is thick in fresh fixed mature pollen but we have seen no indication of regions having an exceptionally thick intine that could be considered associated with an aperture or apertures. About three minutes after transferring fresh pollen to the germinating medium the ridged exine splits and twists away from the intine and its enclosed protoplast. The shed exine spreads out and curls into a scroll-like configuration that is as distinctive as that of the pollen shape had been but now having the ridges and valleys perpendicular to the long axis. The pollen tube develops, in our experience with more than a hundred germinating pollen grains, near one of the narrow tips of the pollen grain's equatorial plane. The location of the pollen tube initiation probably is related to the position of the tube cell nucleus. The pollen tube starts to grow about one hour after the exine was shed. The pollen tube emerges close to the narrow end (equator) of the gametophyte. This end emerged first as the exine is shed and is opposite to the prothallial cells. The stout pollen tube is c. 10µm in diameter grown in vitro on agar. In our germination medium the stout tube continued to elongate for about 24 hours reaching a length of c. 100 µm. With respect to exine morphology the aperture condition could be considered as inaperturate. The pollen tube, however, is formed in a germination area near one end of the exineless gametophyte.     

茴芹属16种植物的花粉形态及系统学分析

利用光学显微镜和扫描电镜对茴芹属16种植物的花粉形态进行了观察,其中12种为首次报道。结果表明,茴芹属16种植物花粉大小为（19.75～33.03）μm×（11.52～17.41）μm,极轴与赤道轴的比值（P/E）为1.40～2.28,体积大小指数（P×E）^1/2为16.71～23.97,属于中型花粉,具三孔沟,萌发孔位置为边萌发孔。花粉粒赤道面观有近矩形、赤道收缩形、椭圆形和近菱形等类型,其中近矩形和赤道收缩形占多数;极面观为三角形或三角圆形。扫描电镜下,其外壁表面纹饰赤道面观为脑纹状,极面观近光滑或为穴纹状。在伞形科芹亚科中,茴芹属植物的花粉具有中等进化、比较进化的形态特征。研究认为,花粉形态可为个别物种的分类处理提供孢粉学证据。     

长蕊木兰花粉形态观察

长蕊木兰(Alcimandra cathcartii)花粉粒椭圆形,具远极单萌发沟,外壁雕纹小穴状。外壁覆盖层具穿孔,柱状层有不典型的小柱,内壁可明显地分为3层。