The Contribution of Ciliated Protozoa to Plankton and Benthos Biomass in a European Ricefield

The densities and biomass of ciliates inhabiting the water-sediment interface and the water column of an experimental ricefield were investigated throughout four annual cycles. Ciliate abundance and biomass were higher at the water-sediment interface than in the water column. In both sites, large ciliates (> 10⁵μm³) contributed the higher biomass values, but the highest densities were found in the intermediate size class (10⁴-10⁵μm³). The prorodontid Coleps hirtus dominated the ciliate assemblage and usually comprised > 50% of total ciliate density. Blooms of C. hirtus , occurred in June in the water column and in July at the sediment surface. During the four cycles of rice cultivation, the average daily values for production of the entire ciliate community was 69.6 mgC/m²/d, and the net production efficiency (K₂) was 72.0%. The estimated production values in the present study are high if compared to production measured for ciliates in other freshwater ecosystems.     

Low efficiency of dietary carbon and nitrogen conversion to growth in an herbivorous coral-reef fish in the wild

Annual ingestion and body growth have been estimated for average-sized adult (mean s.l. 62.7 mm) jewel damselfish. Plectroglyphidodon lacrymatus (Quoy et Gaimard), on a shallow fringing reef of southern Papua New Guinea. Mean ingestion (calculated from daily algal-food consumption in winter, the relationship between water temperature and feeding activity, and C, N and P contents of algal food) was 304.3gC year, 20.4gN year⁻¹ and 3.5gP year⁻¹ for this herbivorous fish. Mean body-growth rates for the fish were 5.7 mm year⁻¹, from SEM analysis of sagittal-otolith microstructure, and 6.2 mm year⁻¹ from a mark-release-recapture study in the wild. Based on C and N analyses of whole fish and the dry-weight/s.L. relationship, the gross growth efficiency of these fish was 0.2% for C and 0.5% for N. These very low efficiencies indicate that although P. lacrymatus ingests and absorbs a high proportion of algal production in its territory, only a small part of the assimilation goes into body growth and is thus potentially available to piscivorous fish higher in the food-chain.     

Spatial and temporal patterns of microcrustacean assemblage structure and secondary production in a wetland ecosystem

1. In contrast to extensive studies of zooplankton in lakes, the role of microcrustaceans in wetlands is not well studied. In this study, spatial and temporal patterns of microcrustacean assemblage structure and secondary production were quantified over a 2-year period in a southeastern U.S.A. wetland.
2. Thirty-two species, including 19 cladocerans, 10 copepods and three ostracods, generated different temporal patterns of density and production between vegetated ( Nymphaea ) and non-vegetated (open-water) zones reflecting species-specific differences in life histories.
3. Summer assemblages were dominated by small, planktonic filter-feeders, typified by high annual production/biomass ( P / B ) and daily production. In contrast, winter assemblages were dominated by larger, epibenthic detritivores with low P / B and high biomass. Seasonal shifts in the relative importance of planktonic species in the warmer months to benthic and epiphytic species in the cooler months suggest that energy flow pathways through microcrustaceans may vary seasonally.
4. Total annual production was higher during both years in the Nymphaea zone (13.0 g and 13.6 g DM m⁻² year⁻¹) than the open-water (8.2 and 6.3 g DM m⁻² year⁻¹), and was similar between years for the entire wetland pond (12.3 and 12.2 g DM m⁻² year⁻¹).
5. Although wetland ecosystems have been the subject of considerable ecological research in the past 20 years, our study is one of the few to demonstrate a highly diverse and relatively productive microcrustacean assemblage. Such comprehensive production studies can be used to quantify the ecological importance of microcrustaceans in freshwater wetland ecosystems.     

Inactivation of bacteria and yeasts on agar surfaces with high power Nd: YAG laser light

G.D. WARD, I.A. WATSON, D.E.S. STEWART-TULL, A.C. WARDLAW AND C.R. CHATWIN. 1996. Near infrared light from a high-powered, 1064 nm, Neodymium : Yttrium Aluminium Garnet (Nd : YAG) laser killed a variety of Gram-positive and Gramnegative bacteria and two yeasts, lawned on nutrient agar plates. A beam (crosssectional area, 1.65 cm²) of laser light was delivered in 10 J, 8 ms pulses at 10 Hz, in a series of exposure times. For each microbial species, a dose/response curve was obtained of area of inactivation vs energy density (J cm⁻²). The energy density that gave an inactivation area (IA) equal to 50% of the beam area was designated the IA₅₀-value and was plotted together with its 95% confidence limits. Average IA₅₀-values were all within a threefold range and varied from 1768 J cm⁻² for Serratia marcescens to 4489 J cm⁻² for vegetative cells of Bacillus stearothermophilus. There were no systematic differences in sensitivity attributable to cell shape, size, pigmentation or Gram reaction. At the lowest energy densities where inactivation was achieved for the majority of organisms (around 2000 J cm⁻²), no effect was observed on the nutrient agar surface, but as the energy density was increased, a depression in the agar surface was formed, followed by localized melting of the agar.     

Biomass and production estimates of a fish community in a small South African estuary

The fish community of the small (17·5 ha) intermittently open East Kleinemonde estuary was sampled between 1994 and 1997 to estimate population size, standing stock, growth and productivity. The estuarine-spawning species were numerically more abundant ( n c . 750 000) but due to their small size contributed only 11·7% to the total biomass. The total annual productivity of all fishes in the estuary ( n c . 890 000), with a standing stock of 28·44 g m ⁻², was calculated at 55·89 g m⁻² year⁻¹. The small sparid Rhabdosargus holubi with a production estimate of 41·35 g m⁻² year⁻¹ accounted for <74% of the total fish production in this estuary.     

Bird community energetics in a boreal coniferous forest

The annual minimum energy consumption of the bird community was 2524 × 10³ kcal km⁻², of which 44% was consumed by wintering species and 73% by passerines. The daily energy consumption was in summer 14–16 × 10³ and in winter 1–2 × 10³ kcal km⁻². In spruce forests and in afforested swamps birds required approximately 0.12% of the net primary production. Their total annual energy consumption was covered by invertebrates (59%), vertebrates (2%) and vegetable matter (39%); the food derived from the ground (55%), from trees (44%) and from the air (1%). Arboreal insectivorous passerines, ground passerines and gallinaceous birds were the most important ecological guilds. Among passerines existence metabolism accounted for 73% of the annual energy consumption, extra activity for 17%, breeding activity for 1%, moult for 4% and nestlings for 4%.     

Seasonal biomass and diversity of estuarine fishes coupled with tropical habitat heterogeneity (southern Gulf of Mexico)

Nekton dynamics were studied in two contrasting habitats in Terminos Lagoon, Mexico. Over an annual cycle, a total of 83 fish species used the high-salinity fringing mangrove/ Thalassia testudinum habitat and biomass ranged from 0.43 to 3.43 g m⁻². The highest biomass occurred during the dry season when aquatic primary production was highest (i.e. 333 g C m⁻² year⁻¹). By contrast, 65 species used the freshwater and low-salinity riverine mangrove/Crassostrea virginica/Vallisneria habitat and biomass ranged from 0.57 to 1.48 g m⁻² with the highest biomass occurring during the wet season, the time of highest primary production in this habitat (i.e. 219 g C m⁻² year⁻¹). The high- and low-salinity habitats serve as ecological bridges between freshwater areas and the sea. Fish life histories have evolved to utilize these habitats for spawning, feeding and nursery grounds in a manner which generally leads to the use of different habitats during the periods of highest primary productivity.     

Rates of sulfate reduction and thiosulfate consumption in a marine microbial mat

Abstract The sulfur cycle in a microbial mat was studied by determining viable counts of sulfate-reducing bacteria, chemolithoautotrophic sulfur bacteria and anoxygenic phototrophic bacteria. All three functional groups of sulfur bacteria revealed a maximum population density in the uppermost 5 mm of the mat: 1.1 × 10⁸ cells of sulfate reducers cm⁻³ sediment, 2.0 × 10⁹ cells of chemolithoautotrophs cm⁻³ sediment, and 4.0 × 10⁷ cells of anoxygenic phototrophs cm⁻³ sediment. Bacterial dynamics were studied by sulfate reduction rate measurements, both under anoxic conditions (dark incubation) and oxic conditions (incubation in the light), and determination of the vertical distribution of the potential rate of thiosulfate consumption under oxic conditions. Sulfate reduction rates in the top 5 mm of the sediment were 566 nmol cm⁻³ d⁻¹ in the absence of oxygen, and 123 nmol cm⁻³ d⁻¹ in the presence of oxygen. In the latter case, the maximum rate was found in the 5–10-mm depth horizon (361 nmol cm⁻³ d⁻¹). Biological consumption of amended thiosulfate was rapid and decreased with depth, while in the presence of molybdate, thiosulfate consumption decreased to 10–30% of the original rate.     

Vertical distribution of methane metabolism in microbial mats of the Great Sippewissett Salt Marsh

Methane metabolism was investigated with respect to depth in intertidal microbial mats of the Great Sippewissett Salt Marsh, Massachusetts. Although sulfate-reducing organisms dominate anaerobic carbon consumption in marine microbial mats, methanogens persist and their activity varies vertically and temporally in the mat system. In the Sippewissett mats, potential methane production for all mat layers was higher in the spring (17.2 ± 4.5 nmol CH₄ cm⁻² day⁻¹) than in the fall (3.0 ± 1.1 nmol CH₄ cm⁻² day⁻¹) and maximal rates were consistently observed in proximity to the chemocline (5–10 mm depth). The methane flux from the mat surface did not vary appreciably over time due to the ability of methanotrophic activity to limit net methane production. Evidence indicates that both aerobic and anaerobic oxidation of methane occurs in this system. The importance of H₂ as a substrate for methanogenesis appeared to be the greatest at the mat surface (0–10 mm), and the proportion of methylotrophic methanogens generally increased with depth. These results suggest that both non-equilibrium H₂ dynamics and the use of non-competitive substrates permit coexistence of methanogens and sulfate-reducing organisms in the mat system.     

Fish production in Oued Sebaou, a seasonal river in North Algeria

Fish were sampled by electrofishing at three contiguous sites 26 km from the source of Oued Sebaou, a seasonal river in North Algeria. River discharge ranges from 300 m³s⁻¹ in the peak of the rainy season to 0.1 m³s⁻¹ at the end of the dry season. Extensive gravel extraction from the river bed takes place during the dry season.
Two species were recorded at each site: Barbus callensis , which is heavily fished locally, and Anguilla anguilla . The three sample maximum likelihood Zippin method was used to estimate mean density and standing crops, which were: barbel, 452 fish ha⁻¹, 5.33 kg ha⁻¹; eels, 149 fish ha⁻¹, 3.04 kg ha⁻¹. Estimated average biomass and production were: barbel, 2.31 kg ha⁻¹, 4.27 kg ha⁻¹ year⁻¹; eels, 1.51 kg ha⁻¹, 2.60 kg ha⁻¹ year⁻¹.     

The efficiency of a new electrofishing technique in determining fish numbers in a large river in Central Poland

A new method of determining fish numbers in a large river, which involved electrofishing from boats downstream to an AC electrical barrier, produced capture efficiencies for different species ranging from 28 to 82% when successive pairs of catches were combined. Estimates of population density, biomass and production for the 18 species in a 2.538 ha segment of the Pilica River, Poland revealed a decline in total numbers of the fish in species diversity between 1963 and 1980. This is attributed to increased fishing pressure, and to a loss in habitat diversity following the loss of many water mills and associated dams. The total production estimate of 0.85 g m⁻² year⁻¹ is low compared with the few published estimates for other large rivers. Roach, dace, chub, gudgeon and bream were the most numerous fish and they constituted 75% of the total population estimate, and 68% of the standing crop and annual production.     

Seasonal patterns of viruses, bacteria and dissolved organic carbon in a riverine wetland

SUMMARY 1. Viral and bacterial abundances were studied in relation to environmental attributes over an annual period, for both planktonic and attached (sediment, aquatic macrophyte and submerged wood) habitats, in a riverine wetland.
2. Annual mean abundance of planktonic viruses ranged from 2.3 × 10⁵−3.8 × 10⁵ particles mL⁻¹ and varied according to sampling site. Significant seasonal patterns in viral abundance were evident and appeared to be linked to variations in bacterial abundance, dissolved organic carbon and inorganic nutrients.
3. Annual mean abundance of viruses associated with surfaces ranged from 1.3 × 10⁶ particles cm⁻² on aquatic macrophytes to 1.1 × 10⁷ particles cm⁻² on wood and also showed seasonal patterns. The difference in viral dynamics among the different sites emphasizes the importance of considering habitat diversity within wetlands when examining microbial communities.     

Polar deserts, their plant cover and plant production in the Canadian High Arctic

A total of 41 stands was sampled for species composition and 29 of these stands for plant standing crop and net annual production at 7 sites on 6 arctic islands. Fourteen additional sites on 10 islands were studied in less detail.
Through polar ordination, three groupings were recognized: polar barrens with an average species richness of 6, a phytomass of 24 g m⁻², and a net annual production of 0.8 g m⁻². Comparable data for the cushion plant and snowflush communities were 9, 120, 3 and 13 species, 400 g m⁻², phytomass and 41 g m⁻² net production respectively. Cryptogams are minor except within showflush communities.
The soils show no horizon development, arc alkaline, and are very tow in organic matter, nitrogen, and phosphorus. It is believed that the combination of limited soil moisture in mid-summer and very low nutrient levels are the primary reason for such low plant cover and plant production in these predominantly polar barren landscapes. Geologic substrate with an abundance of frost-shattered rock and topographic position are factors that control the limited availability of water.     

Life cycle, growth, mortality and production of Ephemerella major Klapalek (Ephemeroptera) in a trout stream in Belgium

SUMMARY. 1. The life cycle of Ephemerella major Klapalek in a chalk trout stream in Belgium took 1 year. Emergence was highly synchronized with a flight period from mid-May to mid-June. Tiny nymphs occurred from June to late August.
2. The mean instantaneous growth rate was high in autumn (3.6% wet wt day⁻¹), very low from November to February (0.8% wet wt day⁻¹) and high until emergence (2.3% wet wt day⁻¹); short day length seemed to be the major factor reducing growth rate during winter.
3. Mortality was close to zero during winter and 1.4—1.7% day⁻¹during other seasons. Total mortality from egg to adult was 99.6%.
4. The annual production was about 9g wet wt m⁻² year⁻¹ and the annual P/ ratio was 7.5. There was good agreement between the production values estimated by four methods. Production rate was highest in May (13 mg wet wt m⁻² day⁻¹) and zero in February.     

Input, movement and exchange of organic matter within a subtropical coastal black water river-flood plain system

SUMMARY. 1. Inputs, movements and exchanges of particulate organic matter were measured on two contrasting floodplains of the Ogeechee River, Georgia, U.S.A. A model, which incorporated measurements of standing crop, respiration, litterfall, inundation, and litter processing rates, was used to estimate annual exchanges of organic matter between the river and floodplains.
2. Annual litterfall was higher on the East floodplain than on the lower elevation West floodplain (902 v. 784 g ash-free-dry-mass [AFDM] m⁻²).
3. Experiments with tagged leaves and sticks demonstrated that litter was readily displaced during floods. The distance and direction of displacement varied within and between floodplains but tended to be higher closer to the river and was generally parallel to the river.
4. The model indicated that both floodplains lost organic matter to the river. The lower elevation floodplain (East) lost more organic matter to the river (208 g AFDM m⁻² year⁻¹) than did the higher elevation (West) floodplain (79g AFDM m⁻² year⁻¹).
5. Inputs of organic matter from the floodplain to the river exceeded the amount of litterfall typically entering heavily forested high gradient headwater streams (5.5 v. 0.4-0.6 kg AFDM m⁻² year⁻¹).
6. Floodplain organic matter inputs may exert a greater influence upon structure and function within these streams than do upstream inputs or primary production. Consequently, current conceptualizations of stream structure and function need to be modified to account for the effects of floodplain inputs on stream channel processes within large, low-gradient rivers.     

Temporal dynamics in epipelic, pelagic and epiphytic algal production in a clear and a turbid shallow lake

SUMMARY 1. Pelagic and epipelic microalgal production were measured over a year in a pre-defined area (depth 0.5 m) in each of two lakes, one turbid and one with clear water. Further estimates of epiphytic production within reed stands were obtained by measuring production of periphyton developed on artificial substrata.
2. Total annual production of phytoplankton and epipelon was 34% greater in the turbid lake (190 g C m⁻² year⁻¹) than in the clearwater lake (141 g C m⁻² year⁻¹). However, the ratio of total production to mean water column TP concentration was two fold greater in the clearwater lake.
3. Phytoplankton accounted for the majority of the annual production (96%) in the turbid lake, while epipelic microalgal production dominated (77%) in the clear lake. The relative contribution of epipelic algae varied over the year, however, and in the turbid lake was higher in winter (11–25%), when the water was relatively clear, than during summer (0.7–1.7%), when the water was more turbid. In the clearwater lake, the relative contribution of epipelon was high both in winter, when the water was most clear, and in mid-summer, when phytoplankton production was constrained either by nutrients or grazing.
4. Compared with pelagic and epipelic primary production, epiphytic production within a reed stand was low and did not vary significantly between the lakes.
5. The study supports the theory of a competitive and compensatory trade-off between primary producers in lakes with contrasting nutrient concentrations, resulting in relatively small differences in overall production between clear and turbid lakes when integrating over the season and over different habitats.     

Soil oxygen flux measured polarographically in an Alaskan tussock tundra

Soil oxygen flux was measured polarographically in undisturbed tussock tundra and in an old vehicle track at Eagle Creek, Alaska. Because some polarograms did not show effective voltage plateaus, the polarographic method was tested for use in the tundra by experimental manipulation of soil water content and microbial oxygen demand. The response of soil oxygen flux was as predicted for artificially waterlogged systems, and the response to increased microbial demand indicated relatively high oxygen availability. Soil oxygen flux ranged from 25.9 ng O₂ cm⁻² min⁻¹ in Sphagnum mats to 3.9 ng O₂ cm⁻² min⁻¹ in unvegetated ruts of the vehicle track. Most sites in unvegetated ruts did not have measurable soil oxygen flux. In contrast, oxygen flux beneath Eriophorum vaginatum tussocks growing in the vehicle track averaged 10.7 ng O₂ cm⁻² min⁻¹.     

Numerical abundance of myxomycetes (myxogastrids) in soils in the West of England

Abstract A most-probable-number technique was used to quantify the abundance of myxomycetes (myxogastrids) in soil samples taken from 23 'Sites of Special Scientific Interest' and one other site in the West of England. Associated organisms and soil conditions were also recorded. Sixteen of the 24 sites yielded myxomycete plasmodium-forming units (PFUs) in numbers averaging 230 cm⁻³ fresh soil. Where detectable in samples of grassland soil, the numbers ranged from 20–2750 cm⁻³, in woodland soil from 20–800 cm⁻³, and in sand dunes from 80–400 cm⁻³. Repeated sampling revealed changing numbers at single sites. The abundance of PFUs was correlated positively with numbers of soil amoebae, ciliates and nematodes, and with levels of magnesium and soil density, and negatively with organic matter content and levels of NH₄-nitrogen and phosphate. Each PFU probably corresponded to one or several uninucleate cells in the soil rather than to a plasmodium.     

A simple model of the eco-hydrodynamics of the epilimnion of Lake Tanganyika

1. The ecosystem response of Lake Tanganyika was studied using a four-component, nutrient–phytoplankton–zooplankton–detritus, phosphorus-based ecosystem model coupled to a nonlinear, reduced-gravity, circulation model. The ecosystem model, an improved version of the earlier eco-hydrodynamics model developed for Lake Tanganyika, was used to estimate the annual primary production of Lake Tanganyika and its spatial and temporal variability. The simulations were driven with the National Centres for Environmental Protection (NCEP) records for winds and solar radiation forcing.
2. The simulated annual cycles of the four ecosystem variables and the daily net primary production were compared with the observations. The comparison showed that simulations reproduced realistically the general features of the annual cycles of epilimnial phosphate, net primary production and plankton dynamics.
3. The climatic simulations for the years 1970–2006 yielded a daily averaged integrated upper layer net production ranging from 0.11 to 1.78 g C m⁻² day⁻¹ and daily averaged chlorophyll- a (chl- a ) from 0.16 to 4.3 mg m⁻³. Although the nutrient concentrations in the epilimnion during the strong wind years were high, the net production was low, which is partly because of the greater vertical mixing, produced by strong winds, exposing the phytoplankton to low light conditions in deeper waters. The simulated annual net production and chl- a agreed quite well with observed production available in the literature.
4. We envisage using this model to predict the future scenarios of primary productivity in the lake.     

Estimation of the starvation losses of nitrogen and energy in the rainbow trout (Oncorhynchus mykiss) with special regard to protein and energy maintenance requirements

Literature data are analysed regarding losses of body substances occurring during a period of food deprivation in rainbow trout ( Oncorhynchus mykiss ). Nitrogen (protein) and energy losses show a distinct dependence on fish mass (FM [g]) and water temperature (T [°C]). Several regression models for this relationship were compared with best testing estimates as follows:
Nitrogen loss [mg N 2 fish⁻¹ 2 d⁻¹] = 0.0658 e^(1.037) 2 FM^0.739
( n = 49, 9–20°C, 5–400g fish mass, P < 0.001, B = 0.826)
Nitrogen-corrected energy loss [J 2 fish⁻¹ 2 d⁻¹] = 22.09 e^(1.034) 2 FM^0.833
( n = 63, 9–25°C, 8–400 g fish mass, P < 0.001, B = 0.887).
For nitrogen loss as well as for nitrogen-corrected energy loss, the metabolic rate shows a progressive increase with rising water temperature. The temperature coefficient increases in magnitude as temperature increases. The introduction of a general common exponent (0.8 instead of 0.739 for nitrogen loss and 0.833 for energy loss) for fish mass decreases the precision of the estimate. The equations could serve as a base for estimating net protein and net energy maintenance requirements of rainbow trout. Possible limitations, caused by uncertainities in estimating the elevated metabolic rate by food intake and ingestion, are discussed.