Trade-offs in community properties through time in a desert rodent community

Resource limitation represents an important constraint on ecological communities, which restricts the total abundance, biomass, and community energy flux a given community can support. However, the exact relationship among these three measures of biological activity remains unclear. Here we use a simple framework that links abundance and biomass with an energetic constraint. Under constant energetic availability, it is expected that changes in abundance and biomass can result from shifts in the distribution of individual masses. We test these predictions using long-term data from a desert rodent community. Total energy use for the community has not changed directionally for 25 years, but species composition has. As a result, the average body size has decreased by almost 50%, and average abundance has doubled. These results lend support to the idea of resource limitation on desert rodent communities and demonstrate that systems are able to maintain community energy flux in the face of environmental change, through changes in composition and structure.     

Structure in a desert rodent community: use of space around Dipodomys spectabilis mounds

Summary In an earlier paper (Bowers et al. 1987) we reported patterns of microhabitat use by desert rodents among 0.25-ha plots where seeds were added or certain rodent species removed. We used the results to make inferences about the spatial organization of the whole rodent community. Here we change our focus to test for spatial usage patterns at a smaller (within-plot) scale. Specifically, we examine to what extent spatial use varies with proximity to mounded burrows of the large kangaroo rat, Dipodomys spectabilis. Capture frequency of five of nine rodent species was correlated with distance from D. spectabilis mounds, while six species showed correlations with vegetative cover that also increased with distance from mounds. In general, sites nearer mounds were underutilized, and sites further away overutilized by the rodent community as a whole. Logistic regression analyses showed for six species that vegetative cover and particularly, distance to nearest mound accounted for more of the variation in whether a station captured a species than did plot-to-plot (i.e., treatment) effects. Similar analyses using two plots where D. spectabilis was removed (where vacant mounds persited for years) suggested that the selection of microhabitats with contrasting vegetation structure was more pronounced in the absence than in the presence of D. spectabilis, and that in most cases distance from mounds was important only if mounds were occupied. Spatial structure in this community appears to revolve around the occupation of space by dominant individuals that partially modify/obscure large scale patterns involving the selection of particular structural microhabitats.     

Spatial organization of a desert rodent community: food addition and species removal

Summary From 1977 through 1983 we conducted experiments on a desert rodent community where supplemental seeds were added or certain rodent species and ants were removed from 0.25-ha fenced plots in a Chihuahuan Desert site in southeastern Arizona, USA. In this paper we examine the patterns of microhabitat use relative to vegetative cover by 11 rodent species. The results show that: i) removal of the largest seed-eating species, Dipodomys spectabilis, produced the most pervasive and dramatic shifts in microhabitat use by the remaining rodent species; ii) adding seeds or removing ants had little effect on the spatial use of microhabitats by rodents in this community; and iii) non-granivores were just as likely as granivores to shift microhabitat use when other granivores were removed. We believe these results indicate that both food and foraging microsites are limited but the relegation of subdominant species to lesspreferred microhabitats by the large Dipodomys spectabilis is the major factor underlying the spatial organization of this community. Results also demonstrate that strong interactions among species increase the probability that pathways of indirect interactions through intermediary species are important; these complex linkages may include species that overlap little in food preferences.     

Response of lizard community structure to desert grassland restoration mediated by a keystone rodent

Many grasslands in the Chihuahuan Desert have transformed to shrublands dominated by creosotebush (Larrea tridentata). Grassland restoration efforts have been directed at controlling creosotebush by applying herbicide over large spatial scales. However, we have a limited understanding of how landscape-scale restoration affects biodiversity. We examined whether restoration treatments in southern New Mexico, USA have influenced the community structure of lizards, which are sensitive to shrub encroachment. We compared lizard community structure on 21 areas treated with herbicide from 7 to 29 years ago with paired untreated areas that were dominated by shrubs and matched by geomorphology, soils, and elevation. To examine mechanisms underlying responses to restoration, we tested whether the abundance of a grassland specialist, Aspidoscelis uniparens, depended on time since treatment, treatment area and isolation, and local habitat quality. Because lizards use rodent burrows as habitat, we tested whether community structure and A. uniparens abundance depended on the abundance of the keystone rodent, Dipodomys spectabilis. Treated areas had reduced shrub cover and increased grass cover compared to untreated areas. Lizard community composition differed strongly between areas, with four species responding to treatments. Divergence in community composition between treated–untreated pairs was greatest for old treatments (≥22 years), and community composition was influenced by D. spectabilis. In particular, the abundance of A. uniparens was greatest on old treatments with a high density of D. spectabilis. Overall, our results demonstrate lizard community structure responds to grassland restoration efforts, and keystone species can shape restoration outcomes. Reestablishment of keystone species may be a critical constraint on the recovery of animal biodiversity after habitat restoration.     

The chorda tympani and its significance for rodent phylogeny

The topographical relationship of the chorda tympani to the tensor tympani muscle in the middle ear region of rodents was recorded, finding that this character provides new phylogenetic information. For this purpose we examined histological serial sections of 63 rodent species representing most families. Two lagomorph species were used as an outgroup. Computed 3D models of middle ear structures of several rodent taxa were prepared for the first time. We observed two different character states concerning the topography of the chorda tympani and the insertion tendon of the tensor tympani muscle: hypotensoric and epitensoric; the latter displays three subtypes. We assume that the shift from a plesiomorphic hypotensoric chorda tympani to an apomorphic epitensoric condition occurred at least six times independently in rodent phylogeny; however, this derived state is bound to higher taxonomic levels. The anomalurids under study show an epitensoric course of the chorda tympani through a mallear channel above the insertion of the tendon – just as in Pedetes capensis. Therefore, we suggest a new synapomorphy for these two taxa, confirming other new evidence as to their monophyly. The principal quality of the character used in this study is discussed.     

The metabolism of phenol in a desert rodent Notomys alexis.

1. Phenol is rapidly metabolized in the desert rodent Notomys alexis; sulphate and glucuronide conjugates being formed.2. The circulating half-life of phenolic metabolites is similar in N. alexis to laboratory mice. This contrasts with comparable data for salicylate turnover.3. After injection, the tissue distribution of phenolic metabolites is highest in liver, lung and kidney.4. In this species, phenol is rapidly conjugated to soluble form and a low rate of water turnover does not correlate with differences in phenol metabolism from those generally observed in mammals.     

The role of recruitment and dispersal limitation in tree community assembly in Amazonian forests

Background: Species composition of plant communities is shaped by the interplay between dispersal limitation, environmental filters and stochastic events.

Aims: The aim of this work was to investigate the effects of dispersal limitation and environmental filtering on tree recruitment. To accomplish this, we employed the unified neutral theory of biodiversity and biogeography to examine migration within the metacommunity, defined as a set of interacting local communities linked by the dispersal of multiple potentially interacting species.

Methods: We sampled 12,975 individuals with dbh ≥ 1 cm in 26 1-ha permanent plots, including habitats of terra firme, transitional forests, várzea and campinarana, on the upper Madeira River, Brazilian Amazon.

Results: Campinarana drew individuals from outside the metacommunity species pool at a mean probability of recruitment of 0.06, a much lower probability than terra firme (0.31), transitional (0.21) and várzea forests (0.22). Environmental variables, such as water table depth, soil texture and fertility, were related to differences in community assembly.

Conclusions: Species abundance distribution and diversity patterns of plant assemblages in a large river landscape in the Amazon highlight the importance of environmental heterogeneity that conditions beta-diversity. The high variation in recruitment probabilities from the metacommunity species pool to local communities suggests high habitat variability in the process of maintaining patterns of local diversity.     

The role of temperature and dispersal in moss-microarthropod community assembly after a catastrophic event

There is a clear crisis in the maintenance of biodiversity. It has been generated by a multitude of factors, notably habitat loss, now compounded by the effects of climate change. Predicted changes in climate include increased severity and frequency of extreme climatic events. To manage landscapes, an understanding of the processes that allow recovery from these extreme events is required. Understanding these landscape-scale processes of community assembly and disassembly is hindered by the large scales at which they operate. Model systems provide a means of studying landscape scale processes at tractable scales. Here, we assess the combined effects of temperature and habitat-patch isolation on assembly of naturally diverse moss microarthropod communities after a high-temperature event. We show that community assembly depends on temperature and on degree of habitat isolation. Heated communities were heavily dominated in abundance by two species, one of them relatively large. The resulting size-structure is unlike that seen in the field. Community composition in habitat fragments appears also to have been influenced by the source pool of recolonizing fauna. Our results highlight the value of dispersal in disturbed landscapes and the potential for habitat connectivity to buffer communities from the effects of climate change.     

Ectoparasites and age-dependent survival in a desert rodent

Host age is one of the key factors in host–parasite relationships as it possibly affects infestation levels, parasite-induced mortality of a host, and parasite distribution among host individuals. We tested two alternative hypotheses about infestation pattern and survival under parasitism in relation to host age. The first hypothesis assumes that parasites are recruited faster than they die and, thus, suggests that adult hosts will show higher infestation levels than juveniles because the former have more time to accumulate parasites. The second hypothesis assumes that parasites die faster than they are recruited and, thus, suggests that adults will show lower infestation levels because of acquired immune response and/or the mortality of heavily infested juveniles and, thus, selection for less infested adults. As the negative effects of parasites on host are often intensity-dependent, we expected that the age-related differences in infestation may be translated to lower or higher survival under parasitism of adults, in the cases of the first and the second hypotheses, respectively. We manipulated ectoparasite numbers using insecticide and assessed the infestation pattern in adult and juvenile gerbils (Gerbillus andersoni) in the Negev Desert. We found only a partial support for age-dependent parasitism. No age-related differences in infestation and distribution among host individuals were found after adjusting the ectoparasite numbers to the host’s surface area. However, age-related differences in survival under parasitism were revealed. The survival probability of parasitized juveniles decreased in about 48% compared to unparasitized hosts while the survival probability of adults was not affected by ectoparasites. Our results suggest that the effect of host age on host–parasite dynamics may not explicitly be determined by age-dependent differences in ectoparasite recruitment or mortality processes but may also be affected by other host-related and parasite-related traits.     

The ants of the southern Sonoran desert: community structure and the role of trees

In contrast to other North American deserts, the southern Sonoran desert is dominated by trees that provide shaded microhabitats necessary for the establishment and survival of several plant species. Near the southern limit of the Sonoran desert in Sonora, Mexico, we evaluated the role that tree microhabitats may play in structuring ant communities. We recorded 39 species and 21 genera of ants from a 9.7-ha area. Total species richness was estimated to be between 47 and 49 species, a much greater species richness than that reported for other North American arid-zone habitats. Although species richness did not differ between open ground and tree-shaded microhabitats, species composition did. Opportunistic species, Camponotus species, Pheidole sciophila and P. titanis were more common near trees, whereas Pheidole sp. A and granivorous species were more active in open areas. The imperilment of trees in the Sonoran desert due to commercial cutting and the spread of buffelgrass Pennisetum ciliare may alter the existing composition of ant communities.     

Spatial structure and niche patterns of a rodent community in the south Bukhara desert (Middle Asia)

The distribution of niches in resource space and the niche patterns of a 13 species community of Middle Asian desert rodents were studied by use of discriminant function analysis Nineteen quantitative parameters of the environment (soil structure and vegetation), measured at 600 sample plots within twenty four one ha grids, were considered The first three canonical axes of resource space account for 83% of the variance, the first axis represents a general landscape gradient from sand to clay soils, the second axis reflects a gradient of increasing productivity, and the third axis reflects a gradient of increasing protectability of the environment The distribution of niches in resource space is not even, there are two distinct spatial guilds consisting of psammophilous and sclerophilous species There is a negative correlation between niche position (distance from species centroid to the center of the resource space) and maximal population biomass At the same time there are no correlations between the niche breadth and the niche position due to the absence of species with really broad niches Rodent biomass increases along the productivity axis and reaches a peak in the middle part of the substrate axis Rodent species diversity increases along the substrate axis from sand to clay soils Changes of species diversity along productivity axis have humpshaped patterns Maximum species diversity was recorded at low level of productivity on the sandy soils and shifted to intermediate levels of productivity on sandy-loam and clay soils     

The role of rodent colony manager

Laura Quinlivan describes her job as rodent colony manager and gives advice on raising rodents.     

MPowering ecologists: community assembly tools for community assembly rules

Null model tests of presence–absence data (‘NMTPAs’) provide important tools for inferring effects of competition, facilitation, habitat filtering, and other ecological processes from observational data. Many NMTPAs have been developed, but they often yield conflicting conclusions when applied to the same data. Type I and II error rates, size, power, robustness and bias provide important criteria for assessing which tests are valid, but these criteria need to be evaluated contingent on the sample size, null hypothesis of interest, and assumptions that are appropriate for the data set that is being analyzed. In this paper, we confirm that this is the case using the software MPower, evaluating the validity of NMTPAs contingent on the null hypothesis being tested, assumptions that can be made, and sample size. Evaluating the validity of NMTPAs contingent on these factors is important towards ensuring that reliable inferences are drawn from observational data about the processes controlling community assembly.     

Tadpole competition in a desert anuran community

Summary Five interspecific competition experiments performed in artificial ponds under temporary pond-like conditions established that temporary and permanent pond tadpoles interact. Temporary pond species typically lowered survivorship and reduced progress towards metamorphosis of permanent pond tadpoles. These results suggest that competitive interactions may partially determine the local distribution of tadpoles in the Chihuahuan Desert by preventing some permanent pond anurans from using temporary ponds. Predation by Scaphiopus multiplicatus tadpoles (a temporary pond species) may also prevent permanent pond tadpoles from using temporary ponds.     

The role of cyanobacterial exopolysaccharides in structuring desert microbial crusts

Abstract: Microbial crusts are present on surfaces of soils throughout the world. A key feature of these crusts in arid zones is the abundance of filamentous sheath-forming and polysaccharide-excreting cyanobacteria. Several isolates of cyanobacteria were prepared from crust samples (Nizzana sand dunes, north-western Negev Desert, Israel). Optimal growth conditions for two such isolates of Microcoleus sp. were defined, and the role of the excreted polysaccharides in affecting the hydrological properties of crust-covered sand dunes was studied. Experiments with the native crust microbial population demonstrated the possibility of net primary productivity at both high relative air humidities and low moisture content.