The volatilization of ammonia from cattle urine applied to soils as influenced by soil properties

The amounts of ammonia volatilized, following the application of cattle urine to 22 soils, were measured in the laboratory during an incubation period of 10 days. The urine contained 12.0 g N dm^-3 and was applied to small columns of soil at a rate equivalent to 26.5 g N m^-2. The soils were from fields of both grassland and arable cultivation and varied widely in properties. Ammonia volatilization ranged from 6.8 to 41.3% of the total urinary N, with a mean value of 26.4%. The soil property most closely related to the extent of volatilization was cation exchange capacity (CEC), and this was so whether all 22 soils were considered together or whether the 14 grassland and 8 arable soils were considered separately. In general, the higher the CEC the less the amount of ammonia volatilized. However, for a given value of CEC, volatilization tended to be greater from a grassland than from an arable soil. The pH of a soil/urine mixture measured after 24 hours was also quite closely correlated with the amount of ammonia volatilized, but the initial pH and titratable acidity of the soil were poorly correlated with ammonia volatilization. ei]H Marschner ei]H Lambers     

Diversity in soil fungi as influenced by DDT

the application of 1 and 2 ppm DDT to soil did not result in any consistent trends in fungal numbers through a 14 week period. However the amplitude of population fluctuations was markedly suppressed in treated soils during the early weeks of treatment.A study of the effect of DDT on the population structure of the genusPenicillium indicated that it undergoes a reduction of diversity with treatment that persists at least through a 9 week survey period.     

Biogeochemistry of terrestrial soils as influenced by short-term flooding

Many terrestrial soils in the US Midwest are temporally flooded during the spring. The effects of short-term flooding on biogeochemical processes that occur in these soils are not fully understood and are the subject of this study. To evaluate these processes we investigated the redox-induced changes in the soil solution for three-cultivated and three-uncultivated/forest soils with different organic matter concentrations. The soils were flooded for 1, 3, 7, and 14-days under anoxic conditions in a biogeochemical reactor. Samples were analyzed for Eh; pH; NO₃ ^?; NH₄ ⁺; total dissolved Mn and Fe; soluble P; dissolved organic and inorganic carbon (DOC–DIC); and evolved CO₂. We found strongly contrasting responses of the terrestrial soils to flooding. Reducing conditions were established quickly in the uncultivated and more slowly in the cultivated soils. Concomitant changes in pH were higher for the uncultivated soils. The uncultivated soils showed a higher increase in the amount of NH₄ ⁺, P, Fe, Mn than the cultivated soils over the 14-day incubation. The total amount of carbon decomposed was much greater for the uncultivated soils with approximately 900 μg C (CO₂ + DOC + DIC) decomposed per gram of soil compared to a total decomposition of 240 μg C g _soil ^?1 for the cultivated soils indicating differences in the type of carbon decomposed. The rapid onset of reducing conditions for the uncultivated soils is attributed to a reactive carbon component that is either absent or occluded in the cultivated soils. This study demonstrates that the biogeochemically-induced changes in carbon dynamics in terrestrial soils are strongly influenced by short-term flooding and the history of soil management.     

Onion fly oviposition as influenced by soil temperature

A direct causal relationship was demonstrated between soil temperature and insect ovipositional propensity. When ovipositional substrates (soils) at 5, 15, 22, 30, 35, and 40°C were presented in multiple treatment (choice) tests with air temperature at 15 or 22°C, onion flies, Delia antiqua (Meigen) (Diptera: Anthomyiidae), laid the most eggs in the 22°C substrate. Only 50 eggs were laid when air temperature was increased to 30°C, as compared to 454 and 1128 eggs at 22 and 15°C, respectively. Thus, an air temperature of 30°C appears to be near the upper limit of onion fly ovipositional activity. The numbers of flies observed (counts taken every 15 min) on substrates ranging from 15 to 40°C were not significantly different. Reduced alightment/arrestment does not explain reduced oviposition on the warmer substrates; however, it may partly explain reduced oviposition on 5°C substrates. The range of substrate temperatures facilitating substantial oviposition was narrower than that eliciting alightment/arrestment on the substrate. The ca. 20°C ovipositional optimum corresponds well with temperatures favoring egg survival and development.

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Résumé La température du sol est réglée, dans les pondoirs de D. antiqua, par un thermoblock, tandis que toutes les autres variables, associées au succédané d'oignon servant de stimulus de ponte, sont maintenues constantes. Une relation causale entre température du sol et activité de ponte est mise en évidence. Quand il y a choix entre des substrats de ponte à 5, 15, 22, 30 et 40°C, avec une température de l'air de 22°C, les mouches pondent surtout dans le substrat à 22°C. L'optimum thermique est de 20°C quand la température de l'air est abaissée à 15°C. La ponte n'est que de 50 ufs quand la température de l'air est portée à 30°C, contre respectivement 454 et 1128 ufs à 22 et 15°C. Ainsi, une température de l'air de 30°C paraît proche de la limite supérieure de l'activité de ponte de D. antiqua. Le nombre de mouches observées sur le substrat (toutes les 15 min.) ne varie pas significativement quand la température du substrat est entre 15 et 40°C. La gamme de températures provoquant la fixation sur le substrat est plus large que celle des températures provoquant une ponte importante. L'optimum de 20°C correspond bien aux températures favorables à la survie et à la croissance de D. antiqua.Ce travail montre l'effet important de facteurs abiotiques sur l'acceptation de la plante-hôte.

     

Elemental concentrations in plant tissues as influenced by low pH soils

Summary Soils influenced by acid mine drainage (pH<5.0) are characterized by low concentrations of essential nutrients and increased solubility of heavy metals. The conditions typically reduce plant establishment and growth. However, river birch (Betula nigra L.) is commonly found along low pH streams in southeastern Ohio. The objective of this study was to determine the concentration of Al, Mn, Ca and Mg inB. nigra tissues.The results indicate Al and Mn are accumulating inB. nigra when compared to other species. Within river birch, Al concentrations are highest in roots; Mn concentrations are highest in leaves. There is not a concomitant reduction in Ca and Mg concentrations as suggested by soil levels.     

Phosphorus depletion in the rhizosphere as influenced by soil moisture

To study the influence of soil moisture on phosphorus (P) depletion in the rhizosphere, maize (Zea mays cv. Trak) was pre-grown in vermiculite filled-PVC tubes for 9 days and then the plants with the tubes were transplanted into soil columns maintained at two soil moisture levels () of 0.14 and 0.20 cm³ cm^–3 for 10 days. The soil columns were separated at 1 cm depth by a nylon screen of 53 m inner mesh size, into 1 cm soil layer above and 3 cm soil column below screen. A root mat developed over the screen, but root hairs only could penetrate it. Regardless of the soil moisture level in the columns, and adequate and equal water and nutrients supply was maintained via wicks from an external nutrient solution to the plant roots in vermiculite. After 10 days, the soil columns were separated from the root mats, quickly frozen in liquid nitrogen and sliced into thin layers (0.2mm) using a refrigerated microtome to give soil samples at defined distances from the root mats for analyses. Lower soil moisture (=0.14) resulted in narrower and steeper depletion profile of 0.5 M NaHCO₃ extractable P (NaHCO₃-P_i) as compared to higher soil moisture (=0.20). Depletion of P in soil solution in the immediate vicinity of root mats did not differ much but the extension of the depletion zones was 0.10 cm at =0.14 and 0.20 cm at =0.20. The depletion up to 0.05cm with =0.14 and up to 0.07 cm with =0.20 was uniform, and may be attributed to the depletion in the root hair zone. Beyond the root hair zones, the theory of diffusion and mass flow was able to explain the observed differences in shape and extent of the P depletion profiles at the two soil moisture levels.     

Chemical forms of plant and soil iron as influenced by soil moisture

Summary Experiments were conducted to determine whether soil moisture content has an effect on the chemical forms of plant and soil iron. Soybean plants, variety Lee, were grown on Adelanto loam soil under greenhouse conditions. Two different moisture levels, 75 per cent and 120 per cent of the moisture equivalent, were maintained in soil samples placed in individual containers. The same moisture treatments were used for separate soil samples on which the test plants were grown.Soil iron forms were determined in the moisture-treated soil by using different extracting agents. A significant decrease in soil iron extracted with 10^–4 M EDTA from soil at the high moisture level was attributed to a relative increase in the free calcium ion.Soybean plants grown under the high moisture level were chlorotic while those under the low moisture level were green in appearance. Plant samples were taken at two stages of growth for subsequent analysis.The chemical analysis of the leaf tissues have shown the presence of equal amounts of total iron and less amounts of water-soluble and active iron in chlorotic tissues as compared to non-chlorotic tissues. The difference found between chlorotic and non-chlorotic plants in the amount of iron in the water extract was in the trichloroacetic acid-soluble fraction. The water- and salt-soluble protein nitrogen was approximately the same in chlorotic and non-chlorotic leaves.     

Water quality and soil properties of ponds as influenced by Makhana (Euryale ferox) cultivation

Summary Analysis of regularly collected samples of soil and water from Makhana (Euryale ferox) growing ponds indicated that pH of soil and water were established near neutrality and C/N of soil near ten. Bicarbonate dominated soil extract while chloride dominated standing water. During grand growth period (March to June), Ca²⁺+Mg²⁺, NH ₄ ⁺ K⁺ increased while Na⁺ increased during decay of the plant (July to September) both in soil and plants. The soil had high contents of micro-nutrients, K and P. S.A.R. of soil was 3 to 4 times that of water. Free energy of exchange indicated stability and spontaneity.     

Recovery of adsorbed zinc in acid soils as influenced by prior phosphorus applications

Summary Five acid soils of Hawaii, having histories of heavy P applications were equilibrated with graded quantities of Zn. Amounts of adsorbed Zn were extracted with a single extraction of 0.005M DTPA. The data indicated that most of the added Zn was in available form. Prior P applications either had no effect on recovery or slightly increased it. The results substantiated the earlier findings that P-induced Zn deficiency could not be due to precipitation of Zn as insoluble Zn–P compounds in the soils.     

Microbial populations and activity in two soils of Tanzania as influenced by mercury

Summary The influence of mercury on microbial populations and activity of two soils from Tanzania was studied. Aretan (2-methoxyethylmercury chloride) slightly affected the microbial population of the Morogoro (Oxisol) soil, which was 10⁷ c.f.u./g in control soil and 10⁶ c.f.u./g in the presence of 2000 mg Hg/kg soil. Mercuric chloride at >8 mg Hg/kg soil increased the population slightly, with a sharp decrease at >100 mg Hg/kg soil, dropping ultimately to 10³ c.f.u./g at 2000 mg Hg/kg soil. In the Arusha (Andept) soil, the microbial response to the two mercury compounds was the opposite of that for the Morogoro soil. Aretan sharply reduced the nitrogenase activity of aerobically incubated Morogoro soils at Hg levels >24 mg/kg, resulting in very low activity at >50 mg Hg/kg soil. Mercuric chloride increased the activity, which showed a peak at 24 mg Hg/kg soils, followed by a sharp drop at 30 mg Hg/kg and remained low thereafter. In the Arusha soil, the activity was reduced gradually by both Aretan and HgCl₂. The response of the activity under anaerobic incubation in the Morogoro soil was the opposite of that under aerobic incubation, in that it was Aretan which at first increased the activity. In the Arusha soil the activity under anaerobic incubation decreased gradually over the entire range of added Hg. Nitrification was decreased by HgCl₂ atlevels of <2 and <10 mg Hg/kg soil in the Arusha and Morogoro soils, respectively. The tolerance to Hg by microorganisms in this study was in the order: total population > nitrogen fixers > nitrifiers. This may be explained in terms of species diversity of the microorganisms, which may be expected to follow the same sequence.

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Population et activités microbiennes dans deux sols de Tanzanie sous l'influence du mercure

Résumé On étudie l'influence du mercure sur les populations et les activités microbiennes de deux sols en provenance de Tanzanie. L'Aretan (chlorure de 2-méthoxyéthylmercure) n'affecte que faiblement la population microbienne du sol de Morogoro (oxisol), qui compte 10⁷ individus par g dans le sol témoin et 10⁶ individus en présence de 2000 mg de mercure par kg de sol. Le chlorure mercurique, à une dose supérieure à 8 mg de mercure par kg de sol, augmente quelque peu la population. Celle-ci décroît brutalement au delà de 100 mg de mercure par kg de sol, pour tomber finalement à 10³ individus par g à 2000 mg de mercure par kg de sol. Dans le sol d'Arusha (Andept), la réponse microbienne aux deux composés mercuriels est l'inverse de celle obtenue avec le sol de Morogoro. L'Aretan réduit fortement l'activité de la nitrogénase de sols de Morogoro incubés en aérobiose à des teneurs en mercure au delà de 24 mg par kg. L'activité devient très faible au delà de 50 mg de mercure par kg de sol. Le chlorure mercurique augmente cette activité, avec un pic de 24 mg de mercure par kg de sol, suivi d'une chute sévère à 30 mg de mercure par kg. L'activité demeure faible aux doses plus fortes. Dans le sol d'Arusha, l'activité est réduite progressivement tant par l'Aretan que par HgCl₂. La réponse de l'activité en incubation anaérobie dans le sol de Morogoro est l'inverse de celle en incubation aérobie en ceci que c'est l'Aretan, cette fois-ci, qui augmente d'abord l'activité. Dans le sol d'Arusha, l'activité en incubation anaérobie décroît progressivement sur l'échelle entière des concentrations d'ajout de mercure. La nitrification est réduite par HgCl₂ à des seuils au dessous de 2 et 10 mg de mercure par kg de sol, respectivement pour les sols d'Arusha et de Morogoro. La tolérance des microorganismes au mercure dans cette étude est dans l'ordre: population totale > fixateurs d'azote > nitrificateurs. Ceci peut être expliqué en termes de diversité des espèces de microorganismes qui suit vraisemblablement la même séquence.

     

Biogeographical patterns of soil molecular microbial biomass as influenced by soil characteristics and management

Aim The spatial organization of soil microbial communities on large scales and the identification of environmental factors structuring their distribution have been little investigated. The overall objective of this study was to determine the spatial patterning of microbial biomass in soils over a wide extent and to rank the environmental filters most influencing this distribution. Location French territory using the French Soil Quality Monitoring Network. This network covers the entire French territory and soils were sampled at 2150 sites along a systematic grid. Methods The soil DNA extracted from all these soils was expressed in terms of soil molecular microbial biomass and related to other soil and land‐use data over French territory. Results This study provides the first extensive map of microbial biomass and reveals the heterogeneous and spatially structured distribution of this biomass on the scale of France. The main factors driving biomass distribution are the physico‐chemical properties of the soil (texture, pH and total organic carbon) as well as land use. Soils from land used for intensive agriculture, especially monoculture and vineyards, exhibited the smallest biomass pools. Interestingly, factors known to influence the large‐scale distribution of macroorganisms, such as climatic factors, were not identified as important drivers for microbial communities. Main conclusions Microbial abundance is spatially structured and dependent on local filters such as soil characteristics and land use but is relatively independent of global filters such as climatic factors or the presence of natural barriers. Our study confirms that the biogeography of microorganisms differs fundamentally from the biogeography of ‘macroorganisms’ and that soil management can have significant large‐scale effects.     

沙冬青与伴生植物深色有隔内生真菌定殖规律及其与土壤因子的相关性

为了探明荒漠环境深色有隔内生真菌(dark septate endophytes, DSE)生态分布和定殖状况, 于2013年7月从宁夏银川、沙坡头和甘肃民勤地区采集沙冬青(Ammopiptanthus mongolicus)及其伴生植物根围0-10、10-20、20-30、30-40、40-50 cm共5个土层土壤样品和根样, 研究了DSE空间定殖规律及其与土壤因子的相关关系。结果表明: 沙冬青和伴生植物根系能被DSE侵染, DSE分布和定殖具有明显的空间异质性, 并与土壤因子密切相关。沙冬青DSE微菌核结构紧凑, 呈团块状, 而伴生植物DSE微菌核零散分布。同一样地, 沙冬青DSE菌丝定殖率、定殖强度和总定殖率较伴生植物高, 而沙冬青和伴生植物微菌核定殖率无显著差异。不同样地, 沙冬青和伴生植物微菌核定殖率无显著差异, 沙冬青DSE菌丝定殖率、定殖强度和总定殖率为沙坡头>银川>民勤; 伴生植物DSE菌丝定殖率、定殖强度和总定殖率为银川>民勤>沙坡头。通径分析和主成分分析表明, 土壤有机质、总球囊霉素、磷酸酶和速效钾是西北荒漠环境中DSE定殖的主要影响因子。     

Epidemiology of wheat take-all as influenced by soil pH and temporal changes in inorganic soil N

Summary Soil pH, NH ₄ ⁺ and NO ₃ ⁻ concentrations in soil, and take-all root rot of winter wheat grown in the field were measured concurrently from sowing to anthesis in order to relate disease development to liming and N fertilization practices. Experimental variables included soil pH (5.5 and 6.0) and three N sources (NH₄NO₃, (NH₄)₂SO₄, NH₄Cl) banded with the seed at sowing in factorial combination with the same three N sources topdressed in the spring. Take-all severity was increased by increasing soil pH and by fertilization with NO ₃ ⁻ . Disease severity on crown roots increased exponentially following spring N fertilization and was affected more by soil pH and N-form than was severity on seminal roots. Grain yield ranged from 4.70 Mgha⁻¹ with spring NH₄NO₃ at soil pH 6.0 to 7.65 Mgha⁻¹ with spring NH₄Cl at soil pH 5.5. Sixty-six percent of the variability in grain yield was explained by the number of take-all infected crown roots per tiller at anthesis. Oregon Agric. Exp. Stn. technical paper no. 7707.     

Mechanical properties of mineralized collagen fibrils as influenced by demineralization

Dentin and bone derive their mechanical properties from a complex arrangement of collagen type-I fibrils reinforced with nanocrystalline apatite mineral in extra- and intrafibrillar compartments. While mechanical properties have been determined for the bulk of the mineralized tissue, information on the mechanics of the individual fibril is limited. Here, atomic force microscopy was used on individual collagen fibrils to study structural and mechanical changes during acid etching. The characteristic 67 nm periodicity of gap zones was not observed on the mineralized fibril, but became apparent and increasingly pronounced with continuous demineralization. AFM-nanoindentation showed a decrease in modulus from 1.5 GPa to 50 MPa during acid etching of individual collagen fibrils and revealed that the modulus profile followed the axial periodicity. The nanomechanical data, Raman spectroscopy and SAXS support the hypothesis that intrafibrillar mineral etches at a substantially slower rate than the extrafibrillar mineral. These findings are relevant for understanding the biomechanics and design principles of calcified tissues derived from collagen matrices.     

The determination of labile soil phosphate as influenced by the time of application of labelled phosphate

Summary An experiment was conducted to determine the effect on the L-values of pre-equilibrating P³² with three soil types for 2, 1, and 0 months before sowing ryegrass. Resin and phosphoric acid were used as carriers. Equilibrium was established some twelve weeks after sowing and this time was virtually unaffected by the pre-equilibration treatments. The phosphate source was found to affect both P uptake and L-value; higher uptake and lower L-values were recorded from the resin.     

Short-term nitrous oxide emissions from pasture soil as influenced by urea level and soil nitrate

Nitrogen excreted by cattle during grazing is a significant source of atmospheric nitrous oxide (N₂O). The regulation of N₂O emissions is not well understood, but may vary with urine composition and soil conditions. This laboratory study was undertaken to describe short-term effects on N₂O emissions and soil conditions, including microbial dynamics, of urea amendment at two different rates (22 and 43 g N m⁻²). The lower urea concentration was also combined with an elevated soil NO ₃ ⁻ concentration. Urea solutions labelled with 25 atom%¹⁵N were added to the surface of repacked pasture soil cores and incubated for 1, 3, 6 or 9 days under constant conditions (60% WFPS, 14 °C). Soil inorganic N (NH ₄ ⁺ , NO ₂ ⁻ and NO ₃ ⁻ ), pH, electrical conductivity and dissolved organic C were quantified. Microbial dynamics were followed by measurements of CO₂ evolution, by analyses of membrane lipid (PLFA) composition, and by measurement of potential ammonium oxidation and denitrifying enzyme activity. The total recovery of¹⁵N averaged 84%. Conversion of urea-N to NO ₃ ⁻ was evident, but nitrification was delayed at the highest urea concentration and was accompanied by an accumulation of NO ₂ ⁻ . Nitrous oxide emissions were also delayed at the highest urea amendment level, but accelerated towards the end of the study. The pH interacted with NH ₄ ⁺ to produce inhibitory concentrations of NH₃(aq) at the highest urea concentration, and there was evidence for transient negative effects of urea amendment on both nitrifying and denitrifying bacteria in this treatment. However, PLFA dynamics indicated that initial inhibitory effects were replaced by increased microbial activity and net growth. It is concluded that urea-N level has qualitative, as well as quantitative effects on soil N transformations in urine patches.     

Molecular biomass and MetaTaxogenomic assessment of soil microbial communities as influenced by soil DNA extraction procedure

Three soil DNA extraction procedures (homemade protocols and commercial kit) varying in their practicability were applied to contrasting soils to evaluate their efficiency in recovering: (i) soil DNA and (ii) bacterial diversity estimated by 16S rDNA pyrosequencing. Significant differences in DNA yield were systematically observed between tested procedures. For certain soils, 10 times more DNA was recovered with one protocol than with the others. About 15 000 sequences of 16S rDNA were obtained for each sample which were clustered to draw rarefaction curves. These curves, as well as the PCA ordination of community composition based on OTU clustering, did not reveal any significant difference between procedures. Nevertheless, significant differences between procedures were highlighted by the taxonomic identification of sequences obtained at the phylum to genus levels. Depending on the soil, differences in the number of genera detected ranged from 1% to 26% between the most and least efficient procedures, mainly due to a poorer capacity to recover populations belonging to Actinobacteria, Firmicutes or Crenarchaeota. This study enabled us to rank the relative efficiencies of protocols for their recovery of soil molecular microbial biomass and bacterial diversity and to help choosing an appropriate soil DNA extraction procedure adapted to novel sequencing technologies.