Detectability and criterion measures in temporal generalization

Computer simulation of performance on “normal” and “episodic” temporal generalization tasks was used to examine the relations between the theoretical parameters of models which fit temporal generalization data (“timing sensitivity” and “threshold”), and the d′ (detectability) and beta (decision criterion) measures of signal-detection theory. In general, changes in timing sensitivity altered d′, whereas threshold changes affected beta, supporting the assertion that the two sorts of variables (“sensitivity/detectability” and “threshold/criterion”) were psychologically equivalent. Cases where temporal generalization gradients were apparently contaminated by “random responding” could be treated by changes in beta, but cases in which temporal generalization gradients were not peaked at the standard posed severe problems for a simple signal-detection account, although existing models of temporal generalization performance could deal with them.     

Hydrolysis and Biodegradation of the Vesicant Agent HT: Two Potential Approaches

HT is a powerful vesicant produced for use as a chemical warfare agent. It is a mixture of 60 wt% 2,2' -dichlorodiethyl sulfide (“HD” or “sulfur mustard”) and 40 wt% bis-(2-(2-chloroethylthio)ethyl) ether (T). Because HT reacts with water to form primarily the alcoholic compounds thiodiglycol (TDG) and bis-(2-(2-hydroxyethylthio)ethyl) ether (T-OH), disposal might be accomplished by combining hydrolysis with biodegradation. The half-lives of H and T in a well-agitated 3.8% HT/water reaction at 90°C were 1.4 and 1.6 minutes, respectively. The concentrations of both compounds were reduced to less than 1 mg/L within about 30 minutes. TDG is readily biodegradable. However, T-OH biodegradability has not been reported previously. HBr treatment converted HT ether-alcohol products to TDG. A comparative study of two hydrolysis/biodegradation approaches is reported here. HT was hydrolyzed (1) in water, and (2) in water then with HBr. Products were used as feed for separate aerobic sequencing batch reactors (SBRs), and bioreactor performances were compared. Although both feed solutions were detoxified in the SBRs, water hydrolysis alone yielded better overall bioreactor operation, a more favorable mass balance, and a simpler process than with the HBr step. Results indicated that although the HBr converted ether-alcohol products to TDG, the HT products were biodegraded with greater efficiency when the HBr treatment was omitted.     

Cochliopodium barki n. sp. (Rhizopoda, Himatismenida) re-isolated from soil 30 years after its initial description

A strain of Cochliopodium isolated from grassland soil at Sourhope Research Station (Scotland, UK) was found to be identical to the strain “Cochliopodium sp.2” studied by Bark in 1973. We name it Cochliopodium barki. It belongs to a group of species (comprising also C. minus and Cochliopodium sp. “NYS strain”) with very similar scale pattern.     

Modelling the microenvironment of a lipase immobilized in polyurethane foams

The effects of partition of substrates and product on the modelling of the microenvironment of an immobilized lipase were evaluated using Response Surface Methodology. The esterification of butyric acid with ethanol in n-hexane, catalyzed by Candida rugosa lipase immobilized in two biocompatible and relatively hydrophilic polyurethane foams (“Hypol FHP 2002™” and “Hypol FHP 5000™”) was used as the model system. For each set of initial conditions, the final concentration of substrates and ethyl butyrate in the microenvironment, at equilibrium, Cmicro, were estimated by mass balancing bulk and foams. The Cmicro values obtained were used to estimate the corresponding partition coefficients of ethanol (P_EtOH), butyric acid (P_BA) and ester (P_EB), between the foams (microenvironment) and the bulk medium. Foams containing previously inactivated lipase, as well as lipase-free foams were used. For both substrates, Cmicro values were, in the majority of the experiments, higher than their macroenvironmental counterparts. The lowest Cmicro values were observed with the less hydrophilic foam (“FHP 5000”). A decrease of Cmicro_EtOH in both foams and Cmicro_BA in “FHP 5000” foams, was obtained upon lipase immobilization. P_EB values were, in all cases, close to zero. This is beneficial in terms of the shift in reaction equilibrium, product recovery and alleviation of product inhibition effects.     

Regulation of primary carbon metabolism in Kluyveromyces lactis

In the recent past, through advances in development of genetic tools, the budding yeast Kluyveromyces lactis has become a model system for studies on molecular physiology of so-called “Nonconventional Yeasts.” The regulation of primary carbon metabolism in K. lactis differs markedly from Saccharomyces cerevisiae and reflects the dominance of respiration over fermentation typical for the majority of yeasts. The absence of aerobic ethanol formation in this class of yeasts represents a major advantage for the “cell factory” concept and large-scale production of heterologous proteins in K. lactis cells is being applied successfully. First insight into the molecular basis for the different regulatory strategies is beginning to emerge from comparative studies on S. cerevisiae and K. lactis. The absence of glucose repression of respiration, a high capacity of respiratory enzymes and a tight regulation of glucose uptake in K. lactis are key factors determining physiological differences to S. cerevisiae. A striking discrepancy exists between the conservation of regulatory factors and the lack of evidence for their functional significance in K. lactis. On the other hand, structurally conserved factors were identified in K. lactis in a new regulatory context. It seems that different physiological responses result from modified interactions of similar molecular modules.     

Impact of vitamin E supplement in standard laboratory animal diet on microvascular manifestation of ischemia/reperfusion injury

Aimed at improving animal fertility and health, diets for farm and laboratory animals have over the last few years been supplemented with increasing amounts of the antioxidant vitamin E. We now demonstrate by intravital microscopy that feeding hamsters with a vitamin E-supplemented “standard” rodent diet (60 ppm vitamin E) significantly reduces the microvascular manifestations of ischemia/reperfusion injury when compared to animals fed a nonsupplemented diet. Postischemic leukocyte adhesion to venular endothelium was reduced from 770 ± 204 cells/mm² at 24 h after reperfusion in control animals on the nonsupplemented diet to 403 ± 105 cells/mm² in animals on the “standard” rodent diet (means ± SD, N = 7 animals per group, p < 0.01). Animals on the nonsupplemented diet showed a dramatic loss of capillary perfusion density until 7 days after reperfusion (to 21 ± 13% of preischemic baseline values), whereas this loss was significantly attenuated (to 71 ± 12% of preischemic values, p < 0.01) in animals on the “standard” rodent diet. No difference in the extent of reperfusion injury was seen between animals on the “standard” rodent diet and animals on diets with substantially higher vitamin E supplements (300 ppm–30.000 ppm). Besides underscoring the benefit of vitamin E in reducing the extent of ischemia/reperfusion injury, this study raises the concern that vitamin E supplements in “standard” laboratory animal diets may have a far-reaching impact on biomedical research by jeopardizing established animal models of disease.     

Novel bioreactor internals for the cultivation of spore‐forming fungi in pellet form

This study introduced an automated long‐term fermentation process for fungals grown in pellet form. The goal was to reduce the overgrowth of bioreactor internals and sensors while better rheological properties in the fermentation broth, such as oxygen transfer and mixing time, can be achieved. Because this could not be accomplished with continuous culture and fed‐batch fermentation, repeated‐batch fermentation was implemented with the help of additional bioreactor internals (“sporulation supports”). This should capture some biomass during fermentation. After harvesting the suspended biomass, intermediate cleaning was performed using a cleaning device. The biomass retained on the sporulation support went through the sporulation phase. The spores were subsequently used as inocula for the next batch. The reason for this approach was that the retained pellets could otherwise cause problems (e.g., overgrowth on sensors) in subsequent batches because the fungus would then show undesirable hyphal growth. Various sporulation supports were tested for sufficient biomass fixation to start the next batch. A reproducible spore concentration within the range of the requirements could be achieved by adjusting the sporulation support (design and construction material), and an intermediate cleaning adapted to this.     

Laser-induced reactions of P700 and cytochrome f in a blue-green alga, Plectonema boryanum

Kinetics of the absorption change of P700 (blue band) and cytochrome f in whole cells of a blue-green alga, Plectonema boryanum, have been studied by Q-switched ruby-laser flash excitation (694 nm; approx. 20 nsec) to elucidate the sequential relationship of these two components in photosynthetic electron transport. “P700” was photooxidized within 2 μsec and recovered in two phases t_1/2 10 μsec and 200 μsec). Under the same conditions cytochrome f was oxidized with a half time of 15 μsec. The magnitude of the fast phase of “P700” recovery, however, diminished at lower laser intensity while the cytochrome f change remained unaffected. The result suggests that cytochrome f and P700 may not be on the same electron-transport chain.     

Immobilization of the surfactant-degrading bacterium Pseudomonas C12B in polyacrylamide gel. II. Optimizing SDS-degrading activity and stability

Conditions were established for optimizing the surfactant (SDS)-degrading activity of Pseudomonas C12B immobilized in polyacrylamide gel beads. Optimum activity was obtained by using immobilized cells derived from stationary phase of batch cultures and incubating with SDS at 30°C at pH 6.5. Half-saturation of the degradation system was achieved at an SDS concentration of 0.23 m . Biocatalyst stability was highest for beads maintained in basal salts medium, retaining 91% of initial activity after 161 d. In Tris/HCl buffer or distilled water, the stability was much lower, although in all cases the stability of immobilized cells was higher than that of free cells under equivalent conditions. Biocatalyst beads “inactivated” by sequential incubation in three batches of distilled water containing only SDS could be reactivated by transferring beads to nutrient medium. Beads packed in a glass column and operated in a continuous up-flow mode using SDS/basal salts eluant produced 100% hydrolysis when run at retention times above 60 min. The system was highly stable in the continuous flow mode; when operated at a residence time of 55 min (initially giving 98% degradation), the extent of degradation decreased only slightly to 93% over a continuous operation period of 3 weeks.     

Sphenophyllum miravallis Vetter and Bowmanites cupulatus sp.n. from the “Illinger Flözzone” (“Heusweiler Schichten”, Lower Stephanian, Saar Basin, German Federal Republic)

This paper deals with a detailed study of Sphenophyllum miravallis Vetter, a member of the “Sphenophyllum thonii group”. New material from the Reisbach colliery, working the “Illinger Flözzone” of the “Heusweiler Schichten” (Lower Stephanian, Saar Basin, German Federal Republic), is described morphologically and anatomically, and the species is discussed. The new material enlarges the known range of variability of the normal aspect of the foliage, i.e. the foliage of the thinner branches. Thicker stems with their aberrant polymorphous foliage, and cellular details, are described for the first time. An emended diagnosis is given. Comparisons with other species are made.

The new species Bowmanites cupulatus is introduced to accommodate fructufications most probably belonging to Sphenophyllum miravallis.

S. crenulatum Knight ex Wagner is considered to be a heterotypic synonym of S. miravallis, the latter name having priority.     

Combination of u.v.-B. and ozone reduces pollen tube growth more than either stress alone

The rate of in vitro Nicotiana tabacum L. “Bel-W3” pollen tube growth was reduced 62 and 44%, respectively, when pollen tubes were exposed to 120 ppb ozone (O₃) for 3 hr or 300 μW/cm² ultraviolet-B (u.v.-B) radiation for 30 min. Petunia hybrida Vilm. “White Cascade” pollen tube growth was reduced 34 and 59%, respectively, upon exposure to O₃ or u.v.-B at the above doses. The combination of u.v.-B at 300 μW/cm² for 30 min, followed by O₃ at 120 ppb for 3 hr, reduced pollen tube growth by 79% for “Bel-W3” and 75% for “White Cascade”. The effect appeared to be additive, implying that different target areas may be affected by the two stressors. In the Northeast, plants are exposed to both u.v.-B and O₃ during the normal growing season. This may result in an unexpectedly higher stress on the reproductive system than had been previously suspected based on these two stressors acting individually.     

Opsin biosynthesis and trans-cis isomerization of aldehyde form chromophore in the blowfly Calliphora erythrocephala eye

The effect of eye carotenoid content, light conditions and retinoid supply on the biosynthesis of opsin, as well as the ability to isomerize of exogenous all-trans-retinal to 11-cis-retinal were investigated in the photoreceptors of blowfly Calliphora. SDS-PAGE of digitonin extracts from isolated rhabdom fractions of carotenoid-fortified and carotenoid-deficient animals revealed, on heavily loaded gels, that in both cases opsin forms faint minor bands similar to the patterns of “R⁻-flies” described as “vitamin A-deficient flies” (Paulsen and Schwemer, Biochim. biophys Acta 557, 358–390, 1979) or “carotenoid-deficient flies” (Paulsen and Schwemer, Eur. J. Biochem. 137, 609–614, 1983. Similar opsin patterns were obtained in flies subjected to continuous 72 h blue or yellow-green light or to a 12 h: 12 h white light:dark cycle, or total darkness, irrespective of the carotenoid content in their eyes. 11-cis-retinal and, to a lesser extent, all-trans-retinal, when included in the diet or painted on the cornea, were found to stimulate opsin biosynthesis in the dark. 11-cis-retinal in the dark or all-trans-retinal after illumination of the flies with blue light were the most effective, as compared with the effect of all-trans-retinal in the dark. Exogenous all-trans-retinal in the dark can be partially converted into a mixture of 11-cis-retinal (26%) and 13-cis-retinal (74%) by fly retina homogenate in vitro. It was concluded that Calliphora opsin biosynthesis is not strongly dependent on the carotenoid supply or on light: dark conditions and is triggered by the 11-cis aldehyde form of the chromophore, which can be produced in the fly retina either by an isomerase system in the dark or as a result of photoisomerization.     

The effect of infra-red radiation on rectal temperature and respiration rate of unacclimated female new zealand white rabbits

1. 1.|An experiment was carried out to examine the effects of various levels of infra-red (i.r.) radiation on rectal temperature (RT) and respiration rate (RR) in New Zealand While rabbits.

2. 2.|A 4 × 3 × 6 factorial design was employed in which the factors were: four intensities of i.r. radiant heating of 0.0, 1.9, 2.1 and 2.4 MJ/m²/h, three replicates and six rabbits.

3. 3.|rectal temperature differed (P < 0.05) between treatments and were highest at the “high” level of i.r. radiation (1°C higher than for controls). At the “medium” and “low” levels of i.r. heating RTs were respectively 0.3 and 0.2°C higher than in controls.

4. 4.|At different levels of radiation RR were different (P < 0.05), with the highest (422.7 ± 218.1 breaths/min) at 2.4 MJ/m²/h i.r. radiant heating. This RR was almost 2.5 times that in controls, while at the “low” and “medium” i.r. levels RR values were respectively 1.5 and 2 times those of controls.

Expression of human dihydrofolate reductase cDNA and its induction by chloramphenicol in Bacillus subtilis

A bifunctional plasmid (pMP358) able to replicate and to express cloned human dihydrofolate reductase cDNA (cDHFR) in both Escherichia coli and Bacillus subtilis was constructed. The expression of cDHFR in B. subtilis was the result of a deletion that placed the cDNA fragment under the control of the chloramphenicol acetyltransferase (CAT) gene promoter of Staphylococcus aureus plasmid pC194. By sequence analysis of plasmid pMP358, we observed a gene fusion occurring between the cDHFR and the 32nd codon of the CAT gene. We report that such a “hybrid” gene is able to direct the synthesis of a 25-kDal “hybrid” protein, which was found to be inducible by supplementing B. subtilis cells with sublethal doses of chloramphenicol.     

Phenolic acids and resistance to insect attack in Sorghum bicolor

Glucose and quinic acid esters of several hydroxybenzoic and cinnamic acids were identified in methanolic extracts of leaves of 15-day-old Sorghum bicolor together with two O-glucosides. Some of the phenolic acids were also found to occur as insoluble esters of cell wall polysaccharides. While these derivatives did not affect the feeding of Locusta migratoria on sorghum, the free acids, as a mixture, were markedly inhibitory. It was found that Sorghum contained a mixture of hydrolases which could effect the transformation of “inactive” phenolic esters and glycosides into “active” phenolic acids at a high enough concentration to significantly reduce feeding by Locusta.     

Contribution of response surface design to the development of glycerolysis systems catalyzed by commercial immobilized lipases

Two commercial immobilized lipases (“Lipozyme® IM” and “Novozym® 435”) were tested as biocatalysts for the glycerolysis of olive residue oil in n-hexane aimed at the production of monoglycerides (MG) and diglycerides (DG). A central composite rotatable design (CCRD) was followed to model and optimize glycerolysis as a function of both the amount of biocatalyst (L) and of the molar ratio glycerol/triglycerides (Gly/TG). For both biocatalysts, the production of free fatty acids (FFA) was described by second order models. In terms of MG and DG production, as well as of TG conversion, the best fits were obtained with first-order models. The highest MG productions were in the range 43–45% (w/w, on the basis of total fat) for both biocatalysts tested at a (Gly/TG) ratio of one. In the case of “Novozym 435”, the lowest load used (12%, w/w) gave the best results, in contrast with “Lipozyme IM” with which a concentration of about 26% (w/w) was necessary to obtain the highest production. Under these conditions, the amount of FFA produced was about 2% and 10% (w/w), respectively, for “Novozym 435” and “Lipozyme IM” catalyzed systems. Considering both FFA production and lipase loading, “Novozym 435” was shown to be a better biocatalyst for the glycerolysis of olive residue oil in n-hexane, aimed at the production of MG, than “Lipozyme IM”.     

Responses of the Circadian Locomotor Activity Rhythm of Mus Booduga to Shifts in LD Schedules

The responses of the field mouse Mus booduga to shifts in schedules of LD cycles were monitored and the results were interpreted with the help of a PRC constructed for the same species. The results reveal that, M. booduga reentrained faster with a lesser number of transients after delay shifts than advance shifts, thus exhibiting “asymmetry effect.” A positive correlation was observed between the number of transients and the number of hours of shift. In most of the shifts, the sign of the transients (negative for delaying transients and positive for advancing transients) coincided with the direction of the shift. Interestingly, 11 and 12 h of advance shifting resulted in delaying transients. An 11-h advance shift can also be interpreted as a 13-h delay. Reentrainment through delaying transients is faster as compared to reentrainment through advancing transients. Thus, this animal might have taken a “shorter route,” as proved by the fact that an 11-h advance shift has evoked delaying transients. But a 13-h advance shift evoked only advancing transients. This prompts us to speculate that there may be a “phase jump” in M. booduga. Further, irrespective of whether L or D has been doubled in a 12-h shift, both evoked only delaying transients.     

On the variation in chromosome number in Potamogeton pectinatus L.

To determine whether the large morphological differences that occur between populations of Potamogeton pectinatus L. have a genetic basis, the chromosome numbers of several populations were counted. Although several numbers were determined, no correlation between different numbers and populations could be established. The number was always close to 2n = 78, which is that most recorded for P. pectinatus in the literature. However, although some aberrant counts can probably be ascribed to incorrect interpretations of the preparations, some cells undoubtedly contain more than 78 chromosomes. Since the chromosomes of P. pectinatus are very small it is difficult to distinguish between “normal” and “B-chromosomes”, which may be the cause of the higher numbers.     

Physiological and genetic modifications of the expression of the yeast mitochondrial adenosine triphosphatase inhibitor

1. The oligomycin-sensitive ATPase activity of submitochondrial particles of the glycerol-grown “petite-negative” yeast: Schizosaccharomyces pombe is markedly stimulated by incubation at 40°C and by trypsin activations are treatment. Both increased in Triton-X 100 extracts of the submitochondrial particles.

2. A trypsin-sensitive inhibitory factor of mitochondrial ATPase with properties similar to that of beef heart has been extracted and purified from glycerolgrown and glucose-grown S. pombe wild type, from the nuclear pleiotropic respiratory-deficient mutant S. pombe M126 and from Saccharomyces cerevisiae.

3. ATPase activation by heat is more pronounced in submitochondrial particles isolated from glycerol-grown than from glucose-grown S. pombe. An activation of lower extent is observed in rat liver mitochondrial particles but is barely detectable in the “petite-positive” yeast: S. cerevisiae. No activation but inhibition by heat is observed in the pleitotropic respiratory-deficient nuclear mutant S. pombe M126.

4. The inhibition of S. pombe ATPase activity by low concentrations of dicyclohexylcarbodiimide dissapears at inhibitor concentrations above 25 μM. In Triton-extract of submitochondrial particles net stimulation of ATPase activity is observed at 100 μM dicyclohexylcarbodiimide. The pattern of stimulation of ATPase activity by dicyclohexylcarbodiimide in different genetic and physiological conditions parallels that produced by heat and trypsin. A similar mode of action is therefore proposed for the three agents: dissociation or inactivation of an ATPase inhibitory factor.

5. We conclude that “petite-positive” and “petite-negative” yeasts contain an ATPase inhibitor factor with properties similar to those of the bovine mitochondrial ATPase inhibitor. The expression of the ATPase inhibitor, measured by ATPase activation by heat, trypsin or high concentrations of dicyclohexylcarbodiimide, is sensitive to alterations of the hydrophobic membrane environment and dependent on both physiological state and genetic conditions of the yeast cells.