BIOACOUSTIC PUBLICATIONS, 1987

The use of amplitudes to identify individuals has historically been ignored by bioacoustic researchers due to problems of attenuation. However, recent studies have shown that amplitudes encode identity in a variety of mammal species. Previously, individuality has been demonstrated in both fundamental frequency (F₀) and amplitude changes of captive Eastern wolf (Canis lupus lycaon) howls with 100% accuracy where attenuation of amplitude due to distance was controlled in a captive environment. In this study, we aim to determine whether both fundamental frequency and amplitude data collected from vocalizations of wild wolves recorded over unknown distances, in variable conditions and with different recording equipment, can still encode identity. We used a bespoke code, developed in Matlab, to extract simple scalar variables from 67 high-quality solo howls from 10 wild individuals and 112 chorus howls from another 109 individuals, including lower quality howls with wind or water noise. Principal component analysis (PCA) was carried out on the fundamental frequency and normalized amplitude of harmonic 1, yielding histogram-derived PCA values on which discriminant function analysis was applied. An accuracy of 100% was achieved when assigning solo howls to individuals, and for the chorus howls a best accuracy of 97.4% was achieved. We suggest that individual recognition using our new extraction and analysis methods involving fundamental frequency and amplitudes together can identify wild wolves with high accuracy, and that this method should be applied to surveys of individuals in capture–mark–recapture and presence–absence studies of canid species.     

Size‐assortative choice and mate availability influences hybridization between red wolves (Canis rufus) and coyotes (Canis latrans)

Anthropogenic hybridization of historically isolated taxa has become a primary conservation challenge for many imperiled species. Indeed, hybridization between red wolves (Canis rufus) and coyotes (Canis latrans) poses a significant challenge to red wolf recovery. We considered seven hypotheses to assess factors influencing hybridization between red wolves and coyotes via pair‐bonding between the two species. Because long‐term monogamy and defense of all‐purpose territories are core characteristics of both species, mate choice has long‐term consequences. Therefore, red wolves may choose similar‐sized mates to acquire partners that behave similarly to themselves in the use of space and diet. We observed multiple factors influencing breeding pair formation by red wolves and found that most wolves paired with similar‐sized conspecifics and wolves that formed congeneric pairs with nonwolves (coyotes and hybrids) were mostly female wolves, the smaller of the two sexes. Additionally, we observed that lower red wolf abundance relative to nonwolves and the absence of helpers increased the probability that wolves consorted with nonwolves. However, successful pairings between red wolves and nonwolves were associated with wolves that maintained small home ranges. Behaviors associated with territoriality are energetically demanding and behaviors (e.g., aggressive interactions, foraging, and space use) involved in maintaining territories are influenced by body size. Consequently, we propose the hypothesis that size disparities between consorting red wolves and coyotes influence positive assortative mating and may represent a reproductive barrier between the two species. We offer that it may be possible to maintain wild populations of red wolves in the presence of coyotes if management strategies increase red wolf abundance on the landscape by mitigating key threats, such as human‐caused mortality and hybridization with coyotes. Increasing red wolf abundance would likely restore selection pressures that increase mean body and home‐range sizes of red wolves and decrease hybridization rates via reduced occurrence of congeneric pairs.     

INFORMATION CONTENT OF COYOTE BARKS AND HOWLS

ABSTRACT

The information content of coyote (Canis latrans) vocalizations is poorly understood, but has important implications for understanding coyote behaviour. Coyotes probably use information present in barks or howls to recognize individuals, but the presence of individually-specific information has not been demonstrated. We found that coyote barks and howls contained individually specific characteristics: discriminant analysis correctly classified barks of five coyotes 69% of the time and howls of six coyotes 83% of the time. We also investigated the stability of vocalization characteristics at multiple distances from the source. Recordings were played back and re-recorded at 10 m, 500 m, and 1,000 m. Vocalization features were measured at each distance and analyzed to determine whether characteristics were stable. Most howl characteristics did not change with distance, and regardless of the distance discriminant analysis was 81% accurate at assigning howls among six individuals. Bark characteristics, however, were less stable and it is unlikely that barks could be used for individual recognition over long distances. The disparate results for the two vocalization types suggest that howls and barks serve separate functions. Howls appear optimized to convey information (i.e. data), while barks seem more suitable for attracting attention and acoustic ranging.     

Widespread occurrence of a domestic dog mitochondrial DNA haplotype in southeastern US coyotes

Sequence analysis of the mitochondrial DNA control region from 112 southeastern US coyotes (Canis latrans) revealed 12 individuals with a haplotype closely related to those in domestic dogs. Phylogenetic analyses grouped this new haplotype in the dog/grey wolf (Canis familiaris/Canis lupus) clade with 98% bootstrap support. These results demonstrate that a male coyote hybridized with a female dog, and female hybrid offspring successfully integrated into the coyote population. The widespread distribution of this haplotype from Florida to West Virginia suggests that the hybridization event occurred long ago before the southeastern USA was colonized by coyotes. However, it could have occurred in the southeastern USA before the main front of coyotes arrived in the area between male coyotes released for sport and a local domestic dog. The introgression of domestic dog genes into the southeastern coyote population does not appear to have substantially affected the coyote's genetic, morphological, or behavioural integrity. However, our results suggest that, contrary to previous reports, hybridization can occur between domestic and wild canids, even when the latter is relatively abundant. Therefore, hybridization may be a greater threat to the persistence of wild canid populations than previously thought.     

Sympatric wolf and coyote populations of the western Great Lakes region are reproductively isolated

Interpretation of the genetic composition and taxonomic history of wolves in the western Great Lakes region (WGLR) of the United States has long been debated and has become more important to their conservation given the recent changes in their status under the Endangered Species Act. Currently, the two competing hypotheses on WGLR wolves are that they resulted from hybridization between (i) grey wolves (Canis lupus) and western coyotes (C. latrans) or (ii) between grey wolves and eastern wolves (C. lycaon). We performed a genetic analysis of sympatric wolves and coyotes from the region to assess the degree of reproductive isolation between them and to clarify the taxonomic status of WGLR wolves. Based on data from maternal, paternal and bi‐parental genetic markers, we demonstrate a clear genetic distinction between sympatric wolves and coyotes and conclude that they are reproductively isolated and that wolf–coyote hybridization in the WGLR is uncommon. The data reject the hypothesis that wolves in the WGLR derive from hybridization between grey wolves and western coyotes, and we conclude that the extant WGLR wolf population is derived from hybridization between grey wolves and eastern wolves. Grey‐eastern wolf hybrids (C. lupus × lycaon) comprise a substantial population that extends across Michigan, Wisconsin, Minnesota and western Ontario. These findings have important implications for the conservation and management of wolves in North America, specifically concerning the overestimation of grey wolf numbers in the United States and the need to address policies for hybrids.     

Molecular genetics of the most endangered canid: the Ethiopian wolf Canis simensis

The world's most endangered canid is the Ethiopian wolf Canis simensis , which is found in six isolated areas of the Ethiopian highlands with a total population of no more than 500 individuals. Ethiopian wolf populations are declining due to habitat loss and extermination by humans. Moreover, in at least one population, Ethiopian wolves are sympatric with domestic dogs, which may hybridize with them, compete for food, and act as disease vectors. Using molecular techniques, we address four questions concerning Ethiopian wolves that have conservation implications. First, we determine the relationships of Ethiopian wolves to other wolf-like canids by phylogenetic analysis of 2001 base pairs of mitochondrial DNA (mtDNA) sequence. Our results suggest that the Ethiopian wolf is a distinct species more closely related to gray wolves and coyotes than to any African canid. The mtDNA sequence similarity with gray wolves implies that the Ethiopian wolf may hybridize with domestic dogs, a recent derivative of the gray wolf. We examine this possibility through mtDNA restriction fragment analysis and analysis of nine microsatellite loci in populations of Ethiopian wolves. The results imply that hybridization has occurred between female Ethiopian wolves and male domestic dogs in one population. Finally, we assess levels of variability within and between two Ethiopian wolf populations. Although these closely situated populations are not differentiated, the level of variability in both is low, suggesting long-term effective population sizes of less than a few hundred individuals. We recommend immediate captive breeding of Ethiopian wolves to protect their gene pool from dilution and further loss of genetic variability.     

Presence of antibotulinum neurotoxin antibodies in selected wild canids in Israel

Serum samples from 35 golden jackals (Canis aureus syriacus), eight wolves (Canis lupus), and four red foxes (Vulpes vulpes) from various regions of Israel were collected during the years 2001-04 and tested for antibodies to Clostridium botulinum neurotoxin (BoNT) types C and D. Antibodies against BoNT types C and D were detected in 10 (29%) and in 3 (9%) of 35 golden jackals, respectively, using enzyme-linked immunosorbent assay. This report describes detection of anti BoNT antibodies in wild canids other than coyotes (Canis latrans) for the first time and demonstrates that C. botulinum type C is prevalent in Israel.     

Characterization of 59 canine single nucleotide polymorphisms in the Italian wolf (Canis lupus) population

We characterized 59 canine single nucleotide polymorphisms (SNPs) in the endangered Italian wolf (Canis lupus) population, which were discovered by resequencing sequence‐tagged‐site (STS) DNA sequences that are known to contain SNPs in domestic dogs. Dog SNPs were usually found also in wolves. Additional SNPs unique in dogs or wolves were discovered, which is important for detecting hybrids between dogs and wolves. We developed new primer sets and analysed 15 SNPs by Pyrosequencing. The characterized SNPs will provide an important addition to the genetic markers that are currently available for studying wild populations of canids.     

Assessment of coyote–wolf–dog admixture using ancestry‐informative diagnostic SNPs

The evolutionary importance of hybridization as a source of new adaptive genetic variation is rapidly gaining recognition. Hybridization between coyotes and wolves may have introduced adaptive alleles into the coyote gene pool that facilitated an expansion in their geographic range and dietary niche. Furthermore, hybridization between coyotes and domestic dogs may facilitate adaptation to human‐dominated environments. We genotyped 63 ancestry‐informative single‐nucleotide polymorphisms in 427 canids to examine the prevalence, spatial distribution and the ecology of admixture in eastern coyotes. Using multivariate methods and Bayesian clustering analyses, we estimated the relative contributions of western coyotes, western and eastern wolves, and domestic dogs to the admixed ancestry of Ohio and eastern coyotes. We found that eastern coyotes form an extensive hybrid swarm, with all our samples having varying levels of admixture. Ohio coyotes, previously thought to be free of admixture, are also highly admixed with wolves and dogs. Coyotes in areas of high deer density are genetically more wolf‐like, suggesting that natural selection for wolf‐like traits may result in local adaptation at a fine geographic scale. Our results, in light of other previously published studies of admixture in Canis, revealed a pattern of sex‐biased hybridization, presumably generated by male wolves and dogs mating with female coyotes. This study is the most comprehensive genetic survey of admixture in eastern coyotes and demonstrates that the frequency and scope of hybridization can be quantified with relatively few ancestry‐informative markers.     

Environmental and social factors influencing wolf (Canis lupus) howling behavior

Animals communicate in a variety of ways and calls are used for a number of important behaviors. Temperature, wind, time of day, and human activities can affect animals’ use of calls, particularly over long distances. Effects of group size on the use of calls can be particularly influential in territorial social carnivores. Where gray wolves (Canis lupus) are hunted by humans, for example, howling may make it easier for hunters to locate individuals and ultimately increase mortality. We hypothesized that a suite of factors would affect wolves’ responses to simulated howling. Specifically, we predicted that howling behavior would increase with (a) group size, (b) pup age, and (c) during crepuscular time periods and howling behavior would decrease (a) where wolves were harvested and (b) when it was hot or windy. Contrary to our prediction, larger groups did not respond as quickly to simulated wolf howls as smaller groups did and minimum and maximum daily temperatures were not good predictors of wolf howling response rates. Individuals in small litters of pups may have responded more quickly to howls than those in large litters because they are eager to seek safety from and have socialization with adults returning from foraging bouts. Although harvest did not appear to affect vocal communication by wolves, group size, pup age, time of day, wind, and number of howls emitted greatly affected wolves’ behavior and responses during howling surveys. Howling responses did not change because of harvest; response rates from wolves were nearly identical with (2.2%) and without (2.3%) harvest. The year-round benefits of long-distance vocal communication may outweigh the costs of increased mortality arising from howling during harvest season.     

Howling as a Means of Communication in Timber Wolves

The communicatory function of howling was studied in three adultmale timber wolves (Canis lupus). Approximately 700 howls weresubjected to spectrographic and auditory analysis. The fundamentalfrequency of howls was divided into beginning, mid-section,and ending, and each section was studied separately. Harmonicfeatures were also examined. Much variation was found withinthe howls of each individual. However, unique features werefound in all howls of two wolves, of potential value in individualrecognition. The variation in characteristics of the fundamental within howlsof individuals was tested to see if it related to features ofthe animal's behavior or environment. Eleven significant relationshipswere found. The characteristics involved were considered potentiallyfunctional in conveying information of a behavioral or environmentalnature. Auditory discrimination was studied by stimulus-response experimentationinvolving simulated wolf howls by humans. By either howlingin response or remaining silent, one wolf demonstrated an abilityto detect the slight difference between live howls and recorded,played-back howls. This ability enhances the possibility thatindividual recognition and conveyance of information may takeplace by means of differences in howls. Analysis of the circumstances in which spontaneous howling (noknown auditory stimulation) occurred demonstrated that isolationresulted in increased howling. A form of long-distance communication is important to a socialunit whose members are often separated. This study suggeststhat howling identifies the species, functions in the locationof specific animals, provides specific information about thehowling animal, and is, therefore, of great value in coordinatingthe social activities of wolves.     

Interspecific killing between wolves and golden jackals in Iran

Interspecific killing is a widespread phenomenon among mammalian carnivores; being common, for instance, within the canid guild. The canid guild in Hamadan province, west of Iran, comprises three species: the gray wolf Canis lupus pallipes, the golden jackal Canis aureus, and the red fox Vulpes vulpes. In this area, habitat transformation and agricultural land uses have significantly reduced wild prey populations. In search of food, members of the canid guild are often driven to human settlements. Due to inefficient waste management, the major source of food for canids here is anthropogenic food resources, such as livestock and pet carcasses, and domestic waste illegally dumped near poultry farms and rural areas. Here, we described one of the first reports in the literature of a case of interspecific killing between a wolf and a golden jackal. On June 13, 2016, a collared wolf (adult male) killed an adult jackal (adult male). Further studies are required to understand intraguild competition among red fox, golden jackals, and wolves in this area.     

The predatory behaviour of the thylacine: Tasmanian tiger or marsupial wolf?

The extinct thylacine (Thylacinus cynocephalus) and the extant grey wolf (Canis lupus) are textbook examples of convergence between marsupials and placentals. Craniodental studies confirm the thylacine's carnivorous diet, but little attention has been paid to its postcranial skeleton, which would confirm or refute rare eyewitness reports of a more ambushing predatory mode than the pack-hunting pursuit mode of wolves and other large canids. Here we show that thylacines had the elbow morphology typical of an ambush predator, and propose that the 'Tasmanian tiger' vernacular name might be more apt than the 'marsupial wolf'. The 'niche overlap hypothesis' with dingoes (Canis lupus dingo) as a main cause of thylacine extinction in mainland Australia is discussed in the light of this new information.     

Do wild dogs exclude foxes? Evidence for competition from dietary and spatial overlaps

Abstract The management of wild canids (wild dogs/dingoes and foxes) presents a conservation dilemma for land managers across Australia. These canids are predators of wildlife and domestic stock but dingoes are considered native and anecdotal reports suggest that they may suppress foxes such that dingo/dog conservation may have a net benefit to wildlife. This study examines dietary and spatial interactions between wild dogs and foxes in the Greater Blue Mountains region of NSW to address the possibility of suppression through competitive exclusion by dogs on foxes. Predator diets were compared using faecal analysis as well as an analysis of 19 dietary studies from similar forest habitats in eastern Australia. Spatial relationships were examined using data from an extensive canid control programme. Diets of wild dogs and foxes showed a high degree of overlap in species taken, indicating potential for competition. But there was also evidence of resource partitioning with the size and arboreality of mammalian prey differing between the two predators. Wild dogs and foxes responded to different landscape‐scale variation in the physical environment, but there was no clear evidence of large‐scale differences in their distribution. At the fine scale there was a negative association between these predators that indicated possible temporal avoidance or localized habitat shifts. Therefore, there is evidence for dietary competition and fine‐scale exclusion, but no support for landscape‐scale exclusion of foxes by wild dogs in the Blue Mountains.     

Howling activity of free-ranging wolves (<Emphasis Type="Italic">Canis lupus</Emphasis>) in the Białowieża Primeval Forest and the Western Beskidy Mountains (Poland)

We investigated spontaneous howling by radio-collared wolves Canis lupus inhabiting the Białowieża Primeval Forest (BPF), eastern Poland, and elicited howling behavior in wolves of the BPF and the Western Beskidy Mountains, southern Poland. Over half (58%) of all spontaneous howls recorded throughout a year occurred in the period from July to October, with a peak in August. The daily pattern of vocal activity by wolves was characterised by a peak between 1800 and 0000 hours, which coincided with the first (dusk) peak of wolf mobility. Wolves howled from the core areas of their territories and not from the peripheries. Howls served as communication between temporarily separated pack mates (43% of cases), after re-union (18%) and before setting out for a hunt (22%). Very few spontaneous howls (2%) were targeted at a neighbouring pack. Wolves responded to human-simulated howling in June–September, with a peak in August (reply rate: 39%). The duration of elicited howling increased significantly with group size: howls by single wolves or pairs lasted, on average, 34–40 s, whereas those of five to seven wolves (including pups) had an average duration of 67–95 s, with a maximum length of nearly 4 min. In the populations of Polish wolves studied here, spontaneous howling served primarily for intra-pack communication. Nonetheless, the high reply rate to howling simulation showed that – if necessary – wolves readily advertised their presence in a territory to strangers.     

Patterns of differentiation and hybridization in North American wolflike canids, revealed by analysis of microsatellite loci

Genetic divergence and gene flow among closely related populations are difficult to measure because mutation rates of most nuclear loci are so low that new mutations have not had sufficient time to appear and become fixed. Microsatellite loci are repeat arrays of simple sequences that have high mutation rates and are abundant in the eukaryotic genome. Large population samples can be screened for variation by using the polymerase chain reaction and polyacrylamide gel electrophoresis to separate alleles. We analyzed 10 microsatellite loci to quantify genetic differentiation and hybridization in three species of North American wolflike canids. We expected to find a pattern of genetic differentiation by distance to exist among wolflike canid populations, because of the finite dispersal distances of individuals. Moreover, we predicted that, because wolflike canids are highly mobile, hybrid zones may be more extensive and show substantial changes in allele frequency, relative to nonhybridizing populations. We demonstrate that wolves and coyotes do not show a pattern of genetic differentiation by distance. Genetic subdivision in coyotes, as measured by theta and Gst, is not significantly different from zero, reflecting persistent gene flow among newly established populations. However, gray wolves show significant subdivision that may be either due to drift in past Ice Age refugia populations or a result of other causes. Finally, in areas where gray wolves and coyotes hybridize, allele frequencies of gray wolves are affected, but those of coyotes are not. Past hybridization between the two species in the south-central United States may account for the origin of the red wolf.      

Responses of sympatric canids to human development revealed through citizen science

Measuring wildlife responses to anthropogenic activities often requires long‐term, large‐scale datasets that are difficult to collect. This is particularly true for rare or cryptic species, which includes many mammalian carnivores. Citizen science, in which members of the public participate in scientific work, can facilitate collection of large datasets while increasing public awareness of wildlife research and conservation. Hunters provide unique benefits for citizen science given their knowledge and interest in outdoor activities. We examined how anthropogenic changes to land cover impacted relative abundance of two sympatric canids, coyote (Canis latrans), and red fox (Vulpes vulpes) at a large spatial scale. In order to assess how land cover affected canids at this scale, we used citizen science data from bow hunter sighting logs collected throughout New York State, USA, during 2004–2017. We found that the two species had contrasting responses to development, with red foxes positively correlated and coyotes negatively correlated with the percentage of low‐density development. Red foxes also responded positively to agriculture, but less so when agricultural habitat was fragmented. Agriculture provides food and denning resources for red foxes, whereas coyotes may select forested areas for denning. Though coyotes and red foxes compete in areas of sympatry, we did not find a relationship between species abundance, likely a consequence of the coarse spatial resolution used. Red foxes may be able to coexist with coyotes by altering their diets and habitat use, or by maintaining territories in small areas between coyote territories. Our study shows the value of citizen science, and particularly hunters, in collection of long‐term data across large areas (i.e., the entire state of New York) that otherwise would unlikely be obtained.     

Canid Coprolites from the Late Pleistocene of Hidalgo,Central Mexico: Importance for the Carnivore Record of North America

We present the first reported occurrence of canid coprolites from the late Pleistocene of central Mexico. The sample consists of five associated coprolites recovered from Quaternary deposits that crop out in southeastern Hidalgo, central Mexico. The material shows several of the typical features of canid feces, including elongated cylindrical shape, uncommon and nondistinct constrictions, and one tapered end. The coprolites are similar in size to feces of North American foxes, such as Vulpes macrotis, V. lagopus, V. vulpes, and Urocyon cinereoargenteus; likewise, their size might be comparable to those of the Pleistocene canid Canis cedazoensis. The content of the studied coprolites consists of numerous teeth and bone fragments referable to the pocket gophers Pappogeomys or Cratogeomys. The coprolite content is related to a mostly carnivorous diet comparable to that of C. cedazoensis, wolves (Canis lupus, C. rufus, and C. dirus), and some foxes (V. macrotis and V. velox). As a result, it is proposed that the potential trace maker of the coprolites could be a form similar to a carnivorous fox or a small dog. These trace fossils represent the first indirect evidence of canids in the late Pleistocene of Hidalgo and provide additional information regarding the geographic distribution of the Canidae in temperate areas of North America that now are part of central Mexico during the second half of the Pleistocene.     

Genetic outcomes of wolf recovery in the western Great Lakes states

Conflicting interpretations of the influence of coyote hybridization on wolf recovery in the western Great Lakes (WGL) states have stemmed from disagreement over the systematics of North American wolves. Questions regarding their recovery status have resulted. We addressed these issues with phylogenetic and admixture analysis of DNA profiles of western wolves, WGL states wolves and Wisconsin coyotes developed from autosome and Y-chromosome microsatellites and mitochondrial DNA control region sequence. Hybridization was assessed by comparing the haplotypes exhibited by sympatric wolves and coyotes. Genetic variability and connectivity were also examined. These analyses support the recognition of Canis lycaon as a unique species of North American wolf present in the WGL states and found evidence of hybridization between C. lupus and C. lycaon but no evidence of recent hybridization with sympatric coyotes. The recolonized WGL states wolves are genetically similar to historical wolves from the region and should be considered restored.