Eco-hydrological effects of landscape pattern change

Scientists and environmental managers alike are increasingly concerned about landscape pattern change and its effect on hydrological and ecological processes. In this paper, research progress is reviewed and key issues of eco-hydrological effects of landscape pattern change are discussed. There are different eco-hydrological effects with landscape pattern change, and most attention is paid to runoff, water quality, and soil loss. Landscape shape and spatial distribution can change precipitation-runoff processes and lead to the change in runoff yield. Water quality is closely connected with the composition and spatial pattern of source and sink landscapes. Soil erosion systems are usually modified by land use structure and landscape pattern, and soil loss will be either reduced or increased with land use change. In addition, the change of landscape pattern also has potential impacts on climate and soil quality. In future studies, more attention should be paid to comprehensive multi-scale and integrated research of landscape pattern and eco-hydrological processes.     

Correlated and uncorrelated fitness landscapes and how to tell the difference

The properties of multi-peaked fitness landscapes have attracted attention in a wide variety of fields, including evolutionary biology. However, relaively little attention has been paid to the properties of the landscapes themselves. Herein, we suggest a framework for the mathematical treatment of such landscapes, including an explicit mathematical model. A central role in this discussion is played by the autocorrelation of fitnesses obtained from a random walk on the landscape. Our ideas about average autocorrelations allow us to formulate a condition (satisfied by a wide class of landscapes we call AR(1) landscapes) under which the average autocorrelation approximates a decaying exponential. We then show how our mathematical model can be used to estimate both the globally optimal fitnesses of AR(1) landscapes and their local structure. We illustrate some aspects of our method with computer experiments based on a single family of landscapes (Kauffman's N-k model), that is shown to be a generic AR(1) landscape. We close by discussing how these ideas might be useful in the tuning of combinatorial optimization algorithms, and in modelling in the experimental sciences.     

Beyond Ground Truth: GIS and the Environmental Knowledge of Herders, Professional Foresters, and Other Traditional Communities

As a result of increasingly apparent and problematic effects of global information system and remote sensing technologies, there has been increased emphasis on demonstrating and incorporating indigenous environmental knowledges in land use and cover analysis. Such approaches, though ethnographically revealing and politically efficacious, tend to reproduce a model of difference between local and scientific knowledges that is epistemologically untenable. This paper demonstrates an alternative use of geographic information system and remotely sensed imagery to both demonstrate the partiality of mapping technology and show possibilities for critical usage of the tool. Using a case from India, the research shows a method to elicit and explore competing environmental knowledges, including and especially those of scientific experts. The analysis concludes that, for both local producers and expert managers, the cultural meaning of landscapes is dependent on their roles in regional production and resource politics.     

Characterization of a second carotenoid β-hydroxylase gene from Arabidopsis and its relationship to the LUT1 locus

Xanthophylls are oxygenated carotenoids that perform critical roles in plants. -carotene hydroxylases (-hydroxylases) add hydroxyl groups to the -rings of carotenes and have been cloned from several bacteria and plants, including Arabidopsis. The lut1 mutation of Arabidopsis disrupts -ring hydroxylation and has been suggested to identify a related carotene hydroxylase that functions specifically on -ring structures. We have used library screening and genomics-based approaches to isolate a second -hydroxylase genomic clone and its corresponding cDNA from Arabidopsis. The encoded protein is 70% identical to the previously reported Arabidopsis -hydroxylase 1. Phylogenetic analysis indicates a common origin for the two proteins, however, their different chromosomal locations, intron positions and intron sizes suggest their duplication is not recent. Although both hydroxylases are expressed in all Arabidopsis tissues analyzed, -hydroxylase 1 mRNA is always present at higher levels. Both cDNAs encode proteins that efficiently hydroxylate the C-3 position of -ring containing carotenes and are only weakly active towards -ring containing carotenes. Neither -hydroxylase cDNA maps to the LUT1 locus, and the genomic region encompassing the LUT1 locus does not contain a third related hydroxylase. These data indicate that the LUT1 locus encodes a protein necessary for -ring hydroxylation but unrelated to -hydroxylases at the level of amino acid sequence.     

Pepsin fragmentation of botulinum type E neurotoxin: Isolation and characterization of 112, 48, 46, and 16 kD fragments

Controlled digestion of 150 kD single chain botulinum type E neurotoxin with pepsin atpH 6.0 produced 112, 48, 46, and 16 kD fragments. These were chromatographically purified; their locations in the 1300 amino acid residue long neurotoxin were determined by identifying the amino terminal 10 residues of 112 and 48 kD fragments, 50 residues of 46 kD fragment, and 59 residues of 16 kD fragment. The 48 and 112 kD fragments contain the N-terminal segment of the neurotoxin (i.e., residue no. 1 to 425 and 1 to 990, respectively), the 46 kD fragment corresponds to 407 residues of the C-terminal region, and the 16 kD fragment contains the 140 residues from a segment nearer to the C-terminus. The 48 kD fragment is similar to the 50 kD N-terminal light chain of the 150 kD dichain neurotoxin, which is generated by tryptic cleavage of the 150 kD single chain neurotoxin, and is separated from the 100 kD C-terminal heavy chain by dithiothreitol (DTT) reduction of an intrachain disulfide bond in the presence of 2 M urea (Sathyamoorthy and DasGupta,J. Biol. Chem. 260, 10461, 1985). The pepsin-generated 48 kD fragment, unlike the light chain, was isolated without exposure to DTT and urea. The single chain 112 kD fragment following trypsin digestion yielded 48 and 60 kD fragments that were separable after DTT reduction of the intrachain disulfide which links them. The N-terminal residues of the smaller fragment were identical to that of the single chain 150 kD neurotoxin; the single chain 112 kD fragment is therefore the neurotoxin minus the 50 kD C-terminal half of the heavy chain. The biological activities of the 48 and 112 kD fragments can be demonstrated in permeabilized PC12 cells (Lomnethet al., J. Neurochem. 57, 1413, 1991); they inhibit norepinephrine release.     

The adaptive significance of cultural behavior: Comments and reply

Summary Fundamentally, theoretically, there is only one process underlying genetic and cultural evolution: natural selection. Organism fitness-enhancement (adaptive significance) is one of its practical mechanisms; group formation and maintenance is another, often but not always through fitness-enhancement; and need-fulfillment is still another. If Durham can accept that formulation, and switch from organism-thinking to instruction-thinking (Cloak, 1975: 178), he will free himself from two handicaps: First, he can forget his worries about reductionism and determinism (1976a: 100, 101). Under this general theory of natural selection, cultural evolutionis biological evolution, continued by other (nongenetic) means. Second, he will spare himself the appearance of anthropomorphism, mentalism, and wishy-washiness attendant on his discussion of kinds of significance, other than adaptive significance, of cultural behaviors (1976a: 102–106, 115).     

Interaction of high mobility group proteins HMG 1 and HMG 2 with nucleosomes studied by gel electrophoresis

The binding of isolated high mobility group proteins HMG (1+2) with nucleosomes was studied using gel electrophoresis. The interaction of HMG (1+2) with mononucleosomes could be detected as a new discrete electrophoretic band with a decreased mobility only after cross-linking of HMG (1+2)-nucleosome complex by formaldehyde. Approximately two molecules of the large HMG proteins were bound per nucleosomal particle of a DNA length of 185 base pairs, lacking histones H1 and H5. Using the same techniques, no binding was observed with core particles of a DNA length of 145 base pairs.     

Sick people and ‘trolls’: A contribution to the understanding of the dynamics of physician explanatory models

This paper describes and interprets a case in which the mutual influences of countertransference and physician explanatory model (EM) are identified, as are their roles in negotiating the clinical relationship and in clinical decision-making (assessment, diagnosis, treatment, expectations of outcome). The author argues that physicians' EMs do not derive exclusively from the official and professionally ideal biomedical model, but are shaped by situational, historical, and subjective influences. Patient-typing (e.g., the widespread distinction between sick people and trolls), together with its associated emotions (e.g., empathy and disdain, respectively), pervades medical education and practice, and often supersedes the biomedical model. Physicians' subjective responses to patients can affect biomedical diagnosis. Failed empathy can lead to missed diagnosis. Finally, the case study illustrates the validity and vitality of the ethnographic approach in clinical teaching and supervision, both in eliciting physicians' own complex EMs, and in facilitating the process of reinterpretation as well.     

Pattern generation in molecular evolution: Exploitation of the variation in RNA landscapes

Evolution of RNA secondary structure is studied using simulation techniques and statistical analysis of fitness landscapes. The transition from RNA sequence to RNA secondary structure leads to fitness landscapes that have local variations in their ruggedness. Evolution exploits these variations. In stable environments it moves the quasispecies toward relatively flat peaks, where not only the master sequence but also its mutants have a high fitness. In a rapidly changing environment, the situation is reversed; evolution moves the quasispecies to a region where the correlation between secondary structures of neighboring RNA sequences is relatively low. In selection for simple secondary structures the movement toward flat peaks leads to pattern generation in the RNA sequences. Patterns are generated at the level of polynucleotide frequencies and the distribution of purines and pyrimidines. The patterns increase the modularity of the sequence. They thereby prevent the formation of alternative secondary structures after mutations. The movement of the quasispecies toward relatively rugged parts of the landscape results in pattern generation at the level of the RNA secondary structure. The base-pairing frequency of the sequences increases. The patterns that are generated in the RNA sequences and the RNA secondary structures are not directly selected for and can be regarded as a side effect of the evolutionary dynamics of the system. Correspondence to: M.A. Huynen     

The relationships between the structure of paddy levees and the plant species diversity in cultural landscapes on the west side of Lake Biwa,Shiga, Japan

Paddy levees form networks of narrow linear habitats and play various roles in cultural landscapes. Traditional landscapes on the west side of Lake Biwa consist of paddy field terraces and both stone and soil levees that have been maintained by paddy field management using local resources. Paddy levees in this study site are principally classified into five different types. Our study points out how differences in paddy levee structure as well as in management practices influence the plant species. Seventeen paddy levee transects were split into four habitat types based on their species components by TWINSPAN. Spatial characteristics and physical structures of paddy levees depended on natural conditions and human activities. The species–area curves of each levee type showed a clear distinction: the soil, stone and abandoned curves were steep, while the concrete and consolidated ones were gentle. The vegetation on consolidated levees was utterly different from the vegetation on traditional levee types from the aspect of species richness and species components. Soil type levees contained various woody plant species and included more diverse and indigenous plant species than abandoned type levees.     

Remote Sensing of Solar-excited Plant Fluorescence as a Measure of Photosynthetic Rate

Leaf level net photosynthetic rates (P _N) of laurel oak (Quercus hemispherica) juveniles grown under contrasting nutrient and CO₂ regimes were negatively correlated with red to far-red ratios, R/FR (690/760 nm), steady-state, solar-excited fluorescence ratios (r ² = 0.66, n = 12) measured across 12 plant canopies. Laurel oak juveniles that had been subjected to nitrogen stress over a period of a year demonstrated higher R/FR than their counterparts that had been provided with sufficient nitrogen. Plants that had been grown at elevated CO₂ concentrations, EC [700 mol (CO₂) mol^-1] also exhibited significantly higher R/FR when subjected to normal ambient carbon dioxide concentrations than their counterparts grown under ambient concentrations, AC [380 mol (CO₂) mol^-1]. All fluorescence measurements were obtained by observing a multi-plant canopy using a unique solar-blind passive sensor. This sensor, which utilizes Fraunhofer-line discrimination techniques, detects radiation at the cores of the lines comprising the atmospheric oxygen A- and B-bands, centered at 762 and 688 nm, respectively. These results support the use of solar-excited steady-state plant fluorescence as a potential tool for remote measurement of canopy radiation use efficiency.     

Über Chromatin und DNS-Synthese im Nucleolus

Zusammenfassung Im Nucleolus der Leberzellen von Ratten ist elektronenmikroskopisch — mit Formalinfixierung — kontrastreiches Chromatin und autoradiographisch — mit H³-Thymidin — eine DNS-Synthese nachweisbar. Das Chromatin ist nicht in die netzigen Anteile der Nucleolarsubstanz (Nucleolonema), sondern in die dazwischen liegenden Aufhellungen eingelassen, doch sind nur einige dieser Räume und auch diese oft nur unvollständig von Karyoplasma (= Chromosomensubstanz) ausgefüllt. Die einzelnen Chromatin-Einschlüsse erreichen normalerweise die lichtmikroskopischesichtbarkeitsgrenzenicht. Lediglich in hepatozellulärenTumornucleolen sind bereits in gewöhnlichen Präparaten feulgenpositive Strukturen festzustellen.Aus den Befunden wird gefolgert: der Nucleolus der Somazellen ist generell von — meist sublichtmikroskopischen — Anteilen aufgelockerter und aufgesplitterter Chromosomen durchzogen. Dabei handelt es sich um die nucleolusorganizer-Region der Nucleolarchromosomen, denen der organisierte Nucleolus auch in der Intermitose verhaftet bleibt.     

Effect of adrenergic agonists and antagonists on alanine amino transferase,fructose-1:6-bisphosphatase and glucose production in hepatocytes

Using rat hepatocytes we confirmed our previous results that glucagon and -adrenergic agonists increased the enzyme activity of alanine aminotransferase (AAT) and propranolol abolished their effects. Only the enzyme activity was measured and other parameters like quantity of the enzyme or activation due to modification were not looked for. As in perfusion experiment phenylephrine and phenoxybenzamine (-agonist and -antagonist respectively) also increased the AAT activity in isolated rat hepatocytes and propranolol reversed these effects. The additive effect of glucagon and phenoxybenzamine on AAT was also persistant in hepatocyte system.Fructose- 1:6-bisphosphatase (Fru-P₂ase), another key enzyme in gluconeogenic pathway, was elevated by glucagon and other -adrenergic agonists both in liver perfusion and isolated hepatocyte experiments and was brought back to the normal level by propranolol. In this case also only the enzyme activity was measured and no other parameters were looked for. Unlike AAT this enzyme was not stimulated by phenylephrine or phenoxybenzamine. But AAT and Fru-P₂-ase activities were increased significantly by adenylate cyclase activators like fluoride or forskolin. Thus, it appears that the regulation of fru-P₂-ase by glucagon is purely a -receptor mediated process whereas AAT activation shows a mixed type of regulation where some well known -agonist and antagonists are behaving as -agonists.Results further indicate the presence of phosphodiesterase in hepatocyte membrane which was stimulated by glucagon and brought back to the normal level by propranolol.The different adrenergic compounds stated above, not only modified the activity of the above two enzymes but also stimulated glucose production by hepatocytes from alanine which was in turn abolished by propranolol as well as amino oxyacetate (AOA), a highly specified inhibitor of AAT. This confirm the participation of AAT in gluconeogenesis from alanine in liver. Forskolin and fluoride also increased the glucose production from alanine and showed additive effects with glucagon, phenylephrine and phenoxybenzamine.     

High-resolution autoradiography of nuclear modifications during and after heat treatment ofNeurospora crassa

Summary The appearance of perinucleolar electron-dense spots in the nuclei of macroconidia ofNeurospora crassa incubated at 46C and their disaggregation after shift-down to 25 C have been investigated by high-resolution autoradiography after (5-³H) uridine pulses with or without chase periods. The RNA of these ribonucleoprotein-rich dense spots has been found to originate mainly from the heatsensitive nucleolus; after return to 25 C, the nucleolar activity was recovered and the RNA material stored either in an unprocessed or a mature rRNA form in the dense spots was found to be progressively extruded into the cytoplasm.     

Biosynthesis of (1,3)(1,4)-β-glucan and (1,3)-β-glucan in barley (Hordeum vulgare L.)

Mixed membrane preparations from the coleoptiles and first leaves of young barley (Hordeum vulgare L. cv. Triumph) plants catalysed the synthesis of 55% methanol-insoluble labelled material from UDP[U-¹⁴C]glucose, the main components of which were identified as (1,3)(1,4)-- and (1,3)--D-glucans. The membrane preparations also catalysed the transformation of UDP-glucose into labelled low-molecular-weight products, mainly glucose (by phosphatase action), glucose-1-phosphate (by phosphodiesterase action) and glyco(phospho)lipids (by glycosyltransferase action). The formation of (1,3)(1,4)--glucans, (1,3)--glucans, and the other reactions competing for UDP-glucose, were monitored simultaneously and quantitatively by a novel procedure based on enzymatic analysis, thin-layer chromatography and digital autoradiography. Thus it was possible (i) to optimise conditions to obtain (1,3)(1,4)--glucan synthesis or (1,3)--glucan synthesis in isolation, and (ii) to study the influence of temperature, pH, cofactors, substrate concentration etc. on the (1,3)(1,4) and (1,3)--glucan synthesis reactions even when both occurred together. The synthesis of both -glucans was optimal at 20°C. In Tris-HCl buffer, the pH optima for (1,3)(1,4)--glucan synthesis and (1,3)--glucan synthesis were pH 8.5 and pH 7.0, respectively. Both glucan-synthesis reactions required Mg²⁺: (1,3)--glucan synthesis was optimal at 2 mM, whereas (1,3)(1,4)--glucan synthesis continued to increase up to 200 mM Mg²⁺, when the ion was supplied as the sulphate. (1,3)--Glucan synthesis was Ca²⁺ dependent and this dependence could be abolished by proteinase treatment. The K _m with respect to UDP-glucose was 1.5 mM for (1,3)--glucan synthesis and approximately 1 mM for (1,3)(1,4)--glucan synthesis. The (1,3)(1,4)--glucan formed in vitro had the same ratio of trisaccharide to tetrasaccharide structural blocks irrespective of the experimental conditions used during the synthesis: its enzymatic fragmentation pattern was indistinguishable from that of barley endosperm (1,3)(1,4)--glucan. This indicates either a single synthase enzyme, which is responsible for the formation of both linkage types, or two enzymes which are very tightly coupled functionally.Abbreviations G4G4G3G Glc(1,4)Glc(1,4)Glc(1,3)Glc (-linked) - UDP-Glc uridine-5-diphosphate glucose We are grateful to the Commission of the European Communities for the award of Training Fellowships to Christine Vincent and Martin Becker.     

Antlers as biomonitors of environmental pollution by lead and fluoride: A review

Antlers are periodically cast and re-grown cranial appendages of deer. Both endochondral and intramembranous ossification are involved in the formation of antler bone. After velvet shedding, antlers are completely bony structures which are referred to as hard antlers. Growing antlers accumulate substances with an affinity to mineralized tissues. Among these substances are lead and fluoride. Due to the seasonally limited life span of antlers, the concentrations of lead and fluoride in hard antlers reflect uptake by the forming bone during a defined, species-specific period of some months. Antlers can thus be viewed as naturally standardized environmental samples that are well suited as biomonitors of environmental pollution by bone-seeking contaminants. Because hard antlers are collected by hunters as trophies and kept in private or public collections, material for study can be obtained rather easily. So far, lead concentrations in hard antlers have been reported only from Europe, whereas data for fluoride are available from both Europe and North America. Some studies compared contaminant concentrations in antlers from different regions, while others analyzed time-trends in contaminant levels in antlers from a single region. Using the latter approach, a pronounced drop of lead concentrations during recent decades has been reported for antlers from various European countries. This indicates a marked decline of environmental lead levels that can be attributed mainly to the phase-out of leaded gasoline and, in addition, to a reduction of lead emissions also from stationary sources. In Germany, a corresponding drop has also been recorded for fluoride concentrations in antlers, which is attributed to a decline of fluoride emissions from stationary sources due to improved emission-control measures. There is some evidence that exposure to higher levels of fluoride may lead to an impaired antler mineralization. Using antlers as biomonitors has been shown to be an efficient method for assessing environmental pollution by lead and fluoride at low cost. Further studies using this now well established approach are therefore encouraged.This revised version was published online in May 2005. The following errors were eliminated:1. In the chapter Antler growth and mineralization in the last sentence of the first paragraph a slash was missing between the words reindeer and caribou; 2. In the second paragraph of the same chapter the word reiudees was corrected to reindeer; 3. In the chapter Accumulation of lead and fluoride in growing antlers the word lightest was corrected to highest.     

Effects of corticosteroids on short-circuit current across the cecum of the domestic fowl,Gallus domesticus

Summary Both avian corticosteroid hormones, aldosterone and corticosterone, increased short-circuit current across the wall of the ceca of the domestic fowl (Gallus domesticus) in vitro. About 80% of this short-circuit current was inhibited by the Na-channel blocking drug amiloride. Corticosterone was about ten times less potent than aldosterone in increasing short-circuit current and it exerted a similar maximal effect. Cortisol (an endogenous corticosteroid hormone in mammals but not birds) was about ten times less potent than corticosterone and this difference appeared to reflect the presence of the 17-OH group in cortisol. Carbenoxolene, which inhibits 11-hydroxysteroid dehydrogenase, increased the effect of corticosterone. This effect is consistent with inhibition of the metabolism of corticosterone to 11-dehydrocorticosterone. The latter was found to be about 100 times less potent than corticosterone. The effects of both aldosterone and corticosterone (also dexamethasone) were abolished by the mineralocorticoid receptor antagonist spironolactone. The results suggest that corticosterone has an effect similar to aldosterone but in vivo its action may be depressed by the activity of 11-hydroxysteroid dehydrogenase. The sensitivity of the cecal preparations to corticosterone indicates that this hormone could contribute to the regulation of transcecal Na transport (absorption) in vivo.Abbreviations 11-HSD 11-Hydroxysteroid dehydrogenase - sc short-circuit current - KRB Krebs bicarbonate solution     

Consequences of harvesting for genetic diversity in American ginseng (<Emphasis Type="Italic">Panax quinquefolius</Emphasis> L.): a simulation study

American ginseng, Panax quinquefolius L., is one of the most heavily traded medicinal plants in North America. The effect of harvest on genetic diversity in ginseng was measured with a single generation culling simulation program. Culling scenarios included random harvest at varying levels, legal limit random harvest and legal limit mature plant harvest. The legal limit was determined by the proportion of legally harvestable plants per population (% mature plants per population). Random harvest at varying levels resulted in significant loss of genetic diversity, especially allelic richness. Relative to initial levels, average within-population genetic diversity (H _e) was significantly lower when plants were culled randomly at the legal limit (Mann–Whitney U=430, p<0.001) or when only mature plants were culled (Mann–Whitney U=394, p<0.01). Within-population genetic diversity was significantly higher with legal limit mature plant harvest (H _e=0.068) than when plants were culled randomly at the legal limit (H _e=0.064; U=202, p<0.01). Based on these simulations of harvest over one generation, we recommend that harvesting fewer than the proportion of mature plants could reduce the negative genetic effects of harvest on ginseng populations.     

American oncology and the discourse on hope

From the perspective of medical anthropology and comparative research, American oncology appears as a unique variant of international biomedical culture, particularly when contrasted with oncological practice in societies such as Japan and Italy. Based on interviews with 51 oncologists in Harvard teaching hospitals, this paper argues that American oncological practice draws on distinctive cultural meanings associated with hope and is infused with popular notions about the relationship between psyche and soma, the progressive efficacy of biotechnical interventions, truth-telling, and the nature of the physician-patient relationship.     

Ethnography,storytelling and the fiction of Toshio Mori

Conclusion Anthropology has always been concerned with shocking the reader and with deconstructing the reader's view of the world by confrontation with that which is seemingly most alien. Nor is the call for self-reflexive research and writing new. Stanley Diamond's work offers one of the most eloquent visions of a self-reflexive anthropology as cultural critique.²⁶ In view of the overwhelming fascination in anthropology with post-modernism, it is useful to remind oneself that not only are the questions raised by post-modernists of long standing, but also that such questions can become an end in themselves, a way to avoid taking positions and to avoid responsibility.Fiction and ethnography should not be confused, nor should one be a substitute for the other. Ethnography has to travel on a fine line between positivist claims of representing some form of objective truth, an impressionistic pseudo-fiction or an ever more inward-turning contemplation of its own contradictions. To do ethnographic work is to accept the obligation to keep trying to elucidate while resisting the attraction of final, definitive interpretations and continually questioning the media of both research and writing that are being employed.