Dynamics of starvation in humans

A differential equation model describing the dynamics of stored energy in the form of fat mass, lean body mass and ketone body mass during prolonged starvation is developed. The parameters of the model are estimated using available data for 7 days into starvation. A simulation of energy stores for a normal individual with body mass index between 19 and 24 and an obese individual with body mass index over 30 are calculated. The length of time the obese subject can survive during prolonged starvation is estimated using the model. Authors are listed in alphabetical order.     

Multiplex genotyping of PCR products with MassTag-labeled primers.

A simple mass spectrometric based assay, the PinPoint assay, has previously been described for typing single nucleotide polymorphisms. The identity of a polymorphism is determined by mass differences of single base extended genotyping primers as determined by MALDI-TOF mass spectrometry. A simple method for multiplexing the assay is described, employing multiple primers with 5'oligo(dT) sequences (MassTags) which serve to mass discriminate the peaks of multiple extended and non-extended primers. The assay is extremely rapid and requires no labeling reagents.     

MALDI-TOF mass spectrometric typing of single nucleotide polymorphisms with mass-tagged ddNTPs.

A matrix-assisted laser desorption/ionization time-of-flight mass spectrometry based method has recently been reported for the typing of single nucleotide polymorphisms using single nucleotide primer extension. This method is limited in some cases by the resolution of the mass determination, as the mass difference between nucleotides can be as little as 9 Da (the difference between A and T). A variation of this method is described here in which a mass-tagged dideoxynucleotide is employed in the primer extension reactions in place of the unmodified dideoxynucleotide. The increased mass difference due to the presence of the mass-tags substantially improves the accuracy and versatility of the procedure.     

ASPIRATION OF BREAST CYSTS

In 1,364 cases of breast cyst aspiration reported in the literature, there is no note of a missed diagnosis of carcinoma.The author carried out needle aspiration in 80 patients with a definite mass in the breast as a therapeutic or diagnostic procedure.A diagnosis must be established for every definite mass in the breast and needle aspiration is a logical diagnostic procedure. If the needle encounters a solid mass, the mass must be removed for biopsy. If the needle encounters a cyst containing fluid, the fluid should be removed completely. A biopsy specimen then should be taken from the mass if (a) the fluid is bloody, (b) the mass does not entirely disappear, or (c) the mass recurs promptly. Adherence to these rules will keep the examining physician from missing a carcinoma within the cyst.Aspiration of breast cysts is a simple and safe diagnostic and therapeutic procedure that saves the patient distress and money.     

Study of the conditions for reproducing the processes of antibiotic biosynthesis. Determining the limiting stage of the process of mass transfer of oxygen

A theoretical method for estimating limiting stage of oxygen mass transfer is proposed. The method is based on calculation and comparison of particular resistance of separate stages of mass transfer: mass transfer through the gas-liquid boundary, oxygen transport in the liquid phase, mass transfer through the liquid-cell boundary and oxygen consumption by microbial cells. With the proposed method, particular resistance was calculated and conditions for oxygen mass transfer were analyzed in the biosynthesis of sisomicin as an example. As a result the conditions for reproducibility of the process in apparatus of various size were determined.     

The linear alometric relationship between total metabolic energy per life span and body mass of poikilothermic animals

A linear relationship exists between total metabolic energy per life span PT(ls) (kJ) and body mass M (kg) of 54 poikilothermic species (Protozoa, Nematoda, Mollusca, Asteroidae, Insecta, Arachnoidae, Crustacea, Pisces, Amphibia, Reptilia and Snakes): PT(ls) = A(ls*)M(1.0838), where P (kJ/day) is the rate of metabolism and T(ls) (days) is the life span of animals. The linear coefficient A(ls*) = 3.7 x 10(5) kJ/kg is the total metabolic energy, exhausted during the life span per 1 kg body mass of animals. This linear coefficient can be regarded as relatively constant metabolic parameter for poikilothermic organisms, ranging from 0.1 x 10(5) to 5.5 x 10(5) kJ/kg, in spite of 17-degree differences between metabolic rate and body mass of animals. A linear relationship between total metabolic energy per life span and body mass of only 48 poikilothermic multicellular animals (without Protozoa) is: PT(ls) = A(ls*)M(0.9692) with linear coefficient A(ls*) = 2.34 x 10(5) kJ/kg. Since a power relationship exists between the rate of metabolism and body mass of animals of the type: P = aMk (a and k are the alometric constants), an empiric rule could be formulated, that life span is a time interval for which the total metabolic energy per life span becomes proportional to body mass of animals and power coefficient k becomes approximately 1.0.     

Terrestrial paternal care and short breeding seasons: reproductive phenology of the midwife toads Alytes obstetricans and A. cisternasii

The reproductive phenology of two Iberian populations of midwife toads Alytes obstetricans and A cistemasii were studied in 1988 and 1989 in two different habitats where chmatological conditions restricted reproductive activity to a few months per year All the observed mating activity of A cisternasii occurred in less than a week while A obstetricans ma tings were observed for over a month A cisternasii matmg activity was explosive and correlated with rainfall No clear trends were observed m the timing of egg mass releases with male size, egg mass size, and proportion of egg mass hatched In both populations males did not complete more than one cycle of egg mass tending per season The duration of terrestnal egg development was estimated to be of 32 d for A obstetricans Alytes cistemasii showed greater flexibility on the duration of egg development, egg masses being released 23 d after the matings m 1988 and 30 d after in 1989 This flexibility is an example of the adaptive significance of terrestrial paternal care when water availabihty is unpredictable     

Rapid analysis of naphthalene and its metabolites in biological systems: Determination by high-performance liquid chromatography/fluorescence detection and by plasma desorption/chemical ionizations mass spectometry

A rapid procedure for the determination of naphthalene and its metabolites in bile of rainbow trout and mice is described. The integrated analytical techniques combine high-performance liquid chromatography/ultraviolet fluorescence detection and plasma desotption/chemical ionization mass spectrometry for identification and quantitation. After separation by reverse-phase liquid chromatography, naphthalene and its metablolites are detected and quantitated by ultraviolet fluoresence spectometry. Identification of two metabolites is confirmed by mass spectometry. A direct insertion probe tip for a conventional chemical ionization mass spectometer was modified to obtain spectra of thermally labile compounds. A spectrum of less than 100 ng of naphthyl glucuronide, a labile glucuronic acid conjugate of 1-naphthol, was obtained with this system.     

Algorithms for identifying protein cross-links via tandem mass spectrometry.

Cross-linking technology combined with tandem mass spectrometry (MS-MS) is a powerful method that provides a rapid solution to the discovery of protein-protein interactions and protein structures. We studied the problem of detecting cross-linked peptides and cross-linked amino acids from tandem mass spectral data. Our method consists of two steps: the first step finds two protein subsequences whose mass sum equals a given mass measured from the mass spectrometry; and the second step finds the best cross-linked amino acids in these two peptide sequences that are optimally correlated to a given tandem mass spectrum. We designed fast and space-efficient algorithms for these two steps and implemented and tested them on experimental data of cross-linked hemoglobin proteins. An interchain cross-link between two beta subunits was found in two tandem mass spectra. The length of the cross-linker (7.7 A) is very close to the actual distance (8.18 A) obtained from the molecular structure in PDB.     

The natural selection of metabolism and mass selects lifeforms from viruses to multicellular animals

I show that the natural selection of metabolism and mass can select for the major life‐history and allometric transitions that define lifeforms from viruses, over prokaryotes and larger unicells, to multicellular animals. The proposed selection is driven by a mass‐specific metabolism that is selected as the pace of the resource handling that generates net energy for self‐replication. An initial selection of mass is given by a dependence of mass‐specific metabolism on mass in replicators that are close to a lower size limit. A sublinear maximum dependence selects for virus‐like replicators, with no intrinsic metabolism, no cell, and practically no mass. A superlinear dependence selects for prokaryote‐like self‐replicating cells, with asexual reproduction and incomplete metabolic pathways. These self‐replicators have selection for increased net energy, and this generates a gradual unfolding of population‐dynamic feed‐back selection from interactive competition. The incomplete feed‐back selects for larger unicells with more developed metabolic pathways, and the completely developed feed‐back for multicellular animals with sexual reproduction. This model unifies the natural selection of lifeforms from viruses to multicellular animals, and it provides a parsimonious explanation where allometries and major life histories evolve from the natural selection of metabolism and mass.     

External mass transfer in a biological film reactor

A method for calculating the mass transfer coefficient in a biological film system, under turbulent flow conditions, is presented. It is experimentally found that fluid velocity has a positive effect on the rate of substrate utilization when the system is operated in other than the kinetic regime. A correlation is developed which indicates a dependence of the mass transfer coefficient on the fluid velocity raised to the 0.7 power.     

Detection of a novel variant human hemoglobin by electrospray ionization mass spectrometry

A novel hemoglobin variant was detected by electrospray ionization mass spectrometry. Hb Zurich-Hottingen is characterized by an Asn --> Ser replacement in the alpha-chain at position 9 as confirmed by DNA analysis. This hemoglobin variant is silent in isoelectric focusing, reversed-phase chromatography, and cation-exchange chromatography. The mutant alpha-chain was detectable only with electrospray mass spectrometry by its mass shift of -27 Da. The carrier was found to be heterozygous for the new hemoglobin variant. These results illustrate the power of ESI mass spectrometry for hemoglobin analysis.     

Daily hospital respiratory admissions and winter air mass types, Birmingham, UK

 A synoptic climatological approach is used to investigate linkages between air mass types (weather situations), the daily mean particulate matter with a size of 10 μm or less (PM10) concentrations and all respiratory hospital admissions for the Birmingham area, UK. Study results show distinct differential responses of respiratory admission rates to the six winter air mass types identified. Two of the three air masses associated with above average admission rates (continental anticyclonic gloom and continental anticyclonic fine and cold) also favour high PM10 levels. This association is suggestive of a possible linkage between weather, air quality and health. The remaining admissions-sensitive air mass type (cool moist maritime) does not favour high PM10 levels. This is considered to be indicative of a direct weather-health relationship. A sensitising mechanism is proposed to account for the linkages between air mass type, PM10 concentrations and respiratory response. Received: 4 August 1997 / Received after revision: 8 January 1999 / Accepted: 20 January 1999     

Liquid-phase mass transfer coefficients in bioreactors

Liquid-phase mass transfer coefficient in bioreactors have been examined. A theoretical model based on the surface renewal concept has been devloped. The predicted liquid-phase mass transfer coefficients are compared with the experimental data for a mycelial fermentation broth (Chaetomium cellulolyticum) and model media (carboxymethyl cellulose) in a bench-scale bubble column reactor. The liquid-phase mass transfer coefficient is evaluated by dividing the volumetric mass transfer coefficient obtained experimentally by the specific surface area estimated using the available correlations. The available literature data in bubble column and stirred tank bioreactors is also used to test the validity of the proposed model. A reasonable agreement between the model and the experimental data is found.     

Sequence analysis of peptide mixtures by automated integration of Edman and mass spectrometric data.

A computer algorithm is described that utilizes both Edman and mass spectrometric data for simultaneous determination of the amino acid sequences of several peptides in a mixture. Gas phase sequencing of a peptide mixture results in a list of observed amino acids for each cycle of Edman degradation, which by itself may not be informative and typically requires reanalysis following additional chromatographic steps. Tandem mass spectrometry, on the other hand, has a proven ability to analyze sequences of peptides present in mixtures. However, mass spectrometric data may lack a complete set of sequence-defining fragment ions, so that more than one possible sequence may account for the observed fragment ions. A combination of the two types of data reduces the ambiguity inherent in each. The algorithm first utilizes the Edman data to determine all hypothetical sequences with a calculated mass equal to the observed mass of one of the peptides present in the mixture. These sequences are then assigned figures of merit according to how well each of them accounts for the fragment ions in the tandem mass spectrum of that peptide. The program was tested on tryptic and chymotryptic peptides from hen lysozyme, and the results are compared with those of another computer program that uses only mass spectral data for peptide sequencing. In order to assess the utility of this method the program is tested using simulated mixtures of varying complexity and tandem mass spectra of varying quality.     

A novel mass spectrometric assay for the cerebroside sulfate activator protein (saposin B) and arylsulfatase A

A mass spectrometric method is described for monitoring cerebrosides in the presence of excess concentrations of alkali metal salts. This method has been adapted for use in the assay of arylsulfatase A (ASA) and the cerebroside sulfate activator protein (CSAct or saposin B). Detection of the neutral glycosphingolipid cerebroside product was achieved via enhancement of ionization efficiency in the presence of lithium ions. Assay samples were extracted into the chloroform phase as for the existing assays, dried, and diluted in methanol-chloroform-containing lithium chloride. Samples were analyzed by electrospray ionization mass spectrometry with a triple quadrupole mass spectrometer in the multiple reaction monitoring tandem mass spectrometric mode. The assay has been used to demonstrate several previously unknown or ambiguous aspects of the coupled ASA/CSAct reaction, including an absolute in vitro preference for CSAct over the other saposins (A, C, and D) and a preference for the non-hydroxylated species of the sulfatide substrate over the corresponding hydroxylated species. The modified assay for the coupled ASA/CSAct reaction could find applicability in settings in which the assay could not be performed previously because of the need for radiolabeled substrate, which is now not required.     

Determination of 1,4- and 1,5-benzodiazepines in urine using a computerized gas chromatographic—mass spectrometric technique

A method for the determination of benzodiazepines and their main metabolites in urine after acid hydrolysis is described. The extract is analyzed by computerized gas chromatography—mass spectrometry. An on-line computer allows rapid detection using mass fragmentography with the masses m/e 211, 230, 241, 244, 249, 262, 276, and 285. The mass fragmentogram and the underlying mass spectra of the hydrolysis products (benzophenones and analogues) are documented.     

Combined experimental and statistical strategy for mass spectrometry based serum protein profiling for diagnosis of breast cancer: a case-control study

Serum protein profiling by mass spectrometry is a promising method for early detection of cancer. We have implemented a combined strategy based on matrix-assisted laser desorption ionization mass spectrometry (MALDI MS) and statistical data analysis for serum protein profiling and applied it in a well-described breast cancer case-control study. A rigorous sample collection protocol ensured high quality specimen and reduced bias from preanalytical factors. Preoperative serum samples obtained from 48 breast cancer patients and 28 controls were used to generate MALDI MS protein profiles. A total of nine mass spectrometric protein profiles were obtained for each serum sample. A total of 533 common peaks were defined and represented a 'reference protein profile'. Among these 533 common peaks, we identified 72 peaks exhibiting statistically significant intensity differences ( p < 0.01) between cases and controls. A diagnostic rule based on these 72 mass values was constructed and exhibited a cross-validated sensitivity and specificity of approximately 85% for the detection of breast cancer. With this method, it was possible to distinguish early stage cancers from controls without major loss of sensitivity and specificity. We conclude that optimized serum sample handling and mass spectrometry data acquisition strategies in combination with statistical analysis provide a viable platform for serum protein profiling in cancer diagnosis.     

Disparity in sexual behaviour between wild and mass‐reared Mexican fruit flies

The sterile insect technique (SIT) is currently used to control Mexican fruit fly Anastrepha ludens Loew (Diptera: Tephritidae). However, mass‐rearing can alter the quality of released males. If males that are mass‐reared have behaviours different from those of their wild counterparts, then this may diminish the effectiveness of SIT. Questions remain as to whether wild females may be able to detect the male condition before, during and/or after copulation with a mass‐reared male. In the present study, copula duration, female remating, female fecundity and fertility of both mass‐reared and wild A. ludens are evaluated. Marked differences are found between mass‐reared and wild females. Specifically, mating latency is longer and copula duration is shorter for wild females compared with mass‐reared females. Importantly, there are no significant differences in mating latency, copula duration or remating probability between wild females paired with either mass‐reared or wild males. All mass‐reared females remate, whereas only approximately half of the wild females remate after first mating with either a wild or mass‐reared male. Fecundity of wild females mated to either wild or mass‐reared males is approximately one‐third lower than that of mass‐reared females, confirming that mass‐reared females may have been selected for high fecundity and are adapted to laboratory conditions. Fertility of females that mate with a wild male for only 10 min is not significantly different from that achieved via a full‐length copulation. By contrast, females mating with mass‐reared males need copulation durations of at least 40 min to achieve fertility comparable with that achieved via a full‐length copulation. The findings of the present study have important implications for A. ludens controlled through SIT and broaden our understanding on the copulatory and post‐copulatory behaviours between wild females and mass‐reared males.     

Effects of competitive stress on vegetative growth, storage, and regrowth after defoliation in Phleum pratense

The capacity for resource storage is important to population persistence in nonforaging plants with a consolidation strategy. In a competitive environment, selection may favor genetic variants with a well-developed ability to store resources for future vegetative growth or to regrow following herbivory. To determine the evolutionary potential for changes in vegetative growth, storage and regrowth after defoliation in response to competitive stress, half-sib families of the caespitose grass Phleum pratense were grown in pots in a glasshouse either alone or in competition with four individuals of Lolium perenne . They were defoliated after 16 wk and permitted to regrow for 8 wk. Production of new tillers, leaf area and leaf dry mass were recorded before and after defoliation; resource storage was estimated by the dry mass of stem bases. Tiller numbers, leaf area and mass, regrowth, and stem base mass were significantly reduced by competition; however, there was significant variation among families for many variables. A significant proportion of the variation in clipped and regrowth leaf mass, and in stem base mass, was due to a competition by family interaction. Storage in stem bases was correlated with total accumulated leaf mass in both control and competition groups. Genetic variation for competitive ability and the ability to regrow rapidly after defoliation exist in this P. pratense population. A well-developed ability to regrow following release from competitive or grazing pressures is likely to be a critical adaptation of caespitose grasses.