Inhibitory effect of iron‐oxidizing bacteria on ferrous‐promoted chalcopyrite leaching

It is generally accepted that iron‐oxidizing bacteria, Thiobacillus ferrooxidans, enhance chalcopyrite leaching. However, this article details a case of the bacteria suppressing chalcopyrite leaching. Bacterial leaching experiments were performed with sulfuric acid solutions containing 0 or 0.04 mol/dm³ ferrous sulfate. Without ferrous sulfate, the bacteria enhance copper extraction and oxidation of ferrous ions released from chalcopyrite. However, the bacteria suppressed chalcopyrite leaching when ferrous sulfate was added. This is mainly due to the bacterial consumption of ferrous ions which act as a promoter for chalcopyrite oxidation with dissolved oxygen. Coprecipitation of copper ions with jarosite formed by the bacterial ferrous oxidation also causes the bacterial suppression of copper extraction. © 1999 John Wiley & Sons, Inc. Biotechnol Bioeng 64: 478–483, 1999.     

Use of Thiobacillus ferrooxidans for iron oxidation and precipitation

Fe(II) oxidation reaction was carried out using an acidophilic microorganism, Thiobacillus ferrooxidans. Four different parameters such as pH, Fe(II), Fe(III) and biomass concentration were studied. The oxida-tion reaction follows a pseudo first order rate equation. Apparent reaction rate constants were calculated. Unified rate equation was developed using the four parameters. Along with oxidation, a part of the iron also was precipitated. The extent of Fe(III) precipitation in each case was calculated. © Rapid Science 1998     

Kinetic studies on elemental sulfur oxidation by Acidithiobacillus ferrooxidans: sulfur limitation and activity of free and adsorbed bacteria

The kinetics of sulfur oxidation by Acidithiobacillus ferrooxidans in shaking flasks and a 10-L reactor was studied. The observed linearity of growth and sulfur oxidation was explained by sulfur limitation. Total cell yield was not significantly different for exponential growth as compared to growth during the sulfur-limiting phase. Kinetic studies of sulfur oxidation by growing and nongrowing bacteria indicated that both free and adsorbed bacteria oxidize sulfur. Changes in the number of free bacteria rather than cells adsorbed on sulfur were better predictors of the kinetics of sulfur oxidation, indicating that the free bacteria were performing sulfur oxidation. The active growth phase always followed adsorption of bacteria on sulfur; however, the special metabolic role of adsorbed bacteria was unclear. Their activity in sulfur solubilization was considered.     

好氧甲烷氧化菌及其工程应用进展

好氧甲烷氧化菌能以甲烷作为碳源和能源,对全球甲烷消除的贡献率高达10%–20%,还能有效地合成有价值的甲烷来源生物产品。文中介绍了好氧甲烷氧化菌的甲烷氧化代谢机理,总结了好氧甲烷氧化菌在填埋场甲烷减排、煤矿通风气治理、合成生物产品、油气藏勘探等领域的实际应用功效和研究热点,即污染物去除和产品合成效率的影响因素。基于对甲烷氧化菌规模化培养方法的研究,本文认为加强培养过程中代谢产物对甲烷氧化菌活性和种群结构影响的研究,以及开发经济高效的替代培养基和培养技术的研究将有利于好氧甲烷氧化菌生物技术的应用推广。     

Microbial communities in four industrial copper dump leaching operations in Bulgaria

Abstract: The microflora of four industrial copper dump leaching operations in Bulgaria was studied in detail. The microbial communities in these operations had a similar species composition but differed from each other with respect to the counts of microorganism related to the different species. It was found that the copper solubilizalion depended mainly on the amount and activity in situ of the mesophilic acidophilic chemolithotrophic bacteria which occurred in the ore dumps, which were the prevailing microorganisms in these engineered environments. On their parts, this amount and activity depended on a complex of environmental factors. These factors varied in the different dumps as well as in different sections of one and the same dump. The attempts to enhance the leaching by improving some of the environmental factors as well as by introducing laboratory-bred strains into the dumps are described.     

Enumeration of iron-oxidizing bacteria by the membrane filter technique

This work presents a simple methodology to enumerate ferrous-iron-oxidizing bacteria in solution, easily applicable in bioleaching industrial plants, because it does not require expertise or specific equipment. The enumeration is based on bacterial concentration by microfiltration through a membrane filter. The filter containing the bacteria is placed on an agarose plate containing ferrous sulphate for bacterial growth. No difference was observed for the enumeration of Acidithiobacillus ferrooxidans ATCC 19859 when either 0.1 or 0.22 m pore size membrane filters were used. However, when the technique was applied to bacteria present in pregnant leaching solution, the smaller bacteria present in these solutions passed through the 0.22 m pore size membrane. Therefore the number of bacteria could be underestimated if they are monitored and filtered using a filter with pore size greater than 0.1 m. The limit of detection of this technique was one ferrous-iron-oxidizing bacterium in the filtered solutions.     

Integrated biological process for the treatment of a Chilean complex gold ore

Abstract: A process for gold recovery from a complex Chilean ore from Burladora (IV Region) which integrates concentration by flotation, bacterial leaching and cyanidation was studied at a laboratory scale. The chemical composition of the ore is 8.2% Fe, 0.78% Cu, 0.88% As and 3.5 g/t Au, with pyrite, hematite, covelite, arsenopyrite and chalcopyrite as the main metal-bearing minerals. The initial gold recovery by conventional cyanidation on a crushed ore sample was only 54%. The ore was ground and concentrated by flotation with a gold recovery of only 56%. The gold content of the concentrate is 17 g/I Au. Concentrate samples were leached in 1.5 l stirred reactors at 10% pulp density in 1000 ml of acid medium (pH 1.8). Some experiments were inoculated with harvested bacteria previously isolated from mining solutions. Dissolved metals, pH and bacteria concentration in the leaching solutions were periodically determined. In the presence of bacteria, oxidation of the ferrous ion produced by acid dissolution of the concentrate was observed, and after 4 days of leaching 100% of the dissolved iron was present as ferric ion. Gold recovery by cyanidation increased from 13% for the initial concentrate to 34% after 10 days of chemical acid leaching and 97% after 10 days of bacterial leaching. To increase the total gold recovery, the flotation tailings were submitted to cyanidation. A complete flowsheet of the process and a first economical evalualion are proposed. As a possible alternative process, heap bacterial leaching and further cyanidation of the ore are suggested.     

Application of iron-oxidizing bacteria to hydrometallurgical flue dust treatment and H2S desulfurization

Abstract: Flue dust produced from the Kosaka copper flashsmelting furnace contains metals such as Cu, Pb, Zn, Fc, As, Cd, etc. To recover these metals, the dust is treated in the hydrometallurgical plant. Previous iron oxidation by air blown at pH 5 and at 50°C for removal of iron from the leached solution has been superceded by bacterial iron oxidation and pecipitation processes. The advantages of this bacterial oxidation procedure are (i) low cost; (ii) clear separation of metals; (iii) improvement in settling and dewatering characteristics and smaller, stable of volume precipitate and (iv) possibilities of fixing arsenate to obtain inexpensive ferric ions. A new hydrogen sulfide gas treatment process has been developed to treat the gas from plants producing barium chemicals. Itydrogen sulfide (70% content) is absorbed on ferric iron solution, and is thus oxidized to elemental sulfur. After the sulfur has been separated, the iron- oxidizing bacteria are employed to regenerate the absorbing solution. In this plant, which produces 150 tons sulfur per month, the hydrogen sulfide content of sweet gas is kept under 10 ppm; equivalent to 99.99%,; of the hydrogen sulfide recovery. The advantages of this process are (i) high H 2S gas removal efficiency; (ii) low running cost; (iii) ease of operation and maintenance: (iv) no waste; (v) high H₂S selectivity; and (vi) good flexibility overload fluctuations.     

Stoichiometric model and metabolic flux analysis for Leptospirillum ferrooxidans

A metabolic model for Leptospirillum ferrooxidans was developed based on the genomic information of an analogous iron oxidizing bacteria and on the pathways of ferrous iron oxidation, nitrogen and CO₂ assimilation based on experimental evidence for L. ferrooxidans found in the literature. From this metabolic reconstruction, a stoichiometric model was built, which includes 86 reactions describing the main catabolic and anabolic aspects of its metabolism. The model obtained has 2 degrees of freedom, so two external fluxes were estimated to achieve a determined and observable system. By using the external oxygen consumption rate and the generation flux biomass as input data, a metabolic flux map with a distribution of internal fluxes was obtained. The results obtained were verified with experimental data from the literature, achieving a very good prediction of the metabolic behavior of this bacterium at steady state. Biotechnol. Bioeng. 2010;107:696–706. © 2010 Wiley Periodicals, Inc.     

Effects of the oxygen transfer rate on ferrous iron oxidation by Thiobacillus ferrooxidans

Ferrous iron oxidation by Thiobacillus ferrooxidans was studied in shake flasks and a bubble column under different aeration conditions. The maximum biooxidation rate constant was affected by oxygen transfer only at low aeration intensities. At oxygen transfer rates higher than 0.03 mmol O₂ l⁻¹ min⁻¹, the maximum biooxidation rate constant was about 0.050 h⁻¹ in both shake flasks of different size and the bubble column. The oxygen transfer rate could be used as a basis for scaling up bioreactors for ferrous iron biooxidation by T. ferrooxidans.     

CARD-FISH研究食细菌线虫对氨氧化细菌（AOB）数量的影响

土壤动物与微生物的取食与反馈之间的关系是土壤生态学研究的核心内容之一。通过接种原位的食细菌线虫和微生物群落模拟土壤真实环境,采用CARD-FISH方法来观察食细菌线虫的不同取食密度下,氨氧化细菌(ammonia oxidizing bacteria)数量的动态变化,以揭示土壤食细菌线虫对AOB数量的影响及AOB的反馈强度。结果表明:与单独接种细菌的处理(SB)相比,接种食细菌线虫显著地增加了土壤中AOB的数量,3个不同线虫接种密度处理中AOB数量表现为接种20条g-1干土的处理(SBN20)接种10条g-1干土的处理(SBN10)接种40条g-1干土的处理(SBN40)。由于过度取食,SBN40处理中AOB的数量在培养了14d后低于SB处理,且在第28天时显著低于SB处理。接种食细菌线虫显著增加了土壤中NH4+-N和NO3-N的含量,表明食细菌线虫促进了N的矿化和硝化作用。矿化作用增强使得硝化作用的底物NH4+-N显著增加可能是AOB数量显著增多的重要原因之一。     

Evaluating four mathematical models for nitrous oxide production by autotrophic ammonia‐oxidizing bacteria

There is increasing evidence showing that ammonia‐oxidizing bacteria (AOB) are major contributors to N₂O emissions from wastewater treatment plants (WWTPs). Although the fundamental metabolic pathways for N₂O production by AOB are now coming to light, the mechanisms responsible for N₂O production by AOB in WWTP are not fully understood. Mathematical modeling provides a means for testing hypotheses related to mechanisms and triggers for N₂O emissions in WWTP, and can then also become a tool to support the development of mitigation strategies. This study examined the ability of four mathematical model structures to describe two distinct mechanisms of N₂O production by AOB. The production mechanisms evaluated are (1) N₂O as the final product of nitrifier denitrification with NO as the terminal electron acceptor and (2) N₂O as a byproduct of incomplete oxidation of hydroxylamine (NH₂OH) to NO. The four models were compared based on their ability to predict N₂O dynamics observed in three mixed culture studies. Short‐term batch experimental data were employed to examine model assumptions related to the effects of (1) NH concentration variations, (2) dissolved oxygen (DO) variations, (3) NO accumulations and (4) NH₂OH as an externally provided substrate. The modeling results demonstrate that all these models can generally describe the NH, NO, and NO data. However, none of these models were able to reproduce all measured N₂O data. The results suggest that both the denitrification and NH₂OH pathways may be involved in N₂O production and could be kinetically linked by a competition for intracellular reducing equivalents. A unified model capturing both mechanisms and their potential interactions needs to be developed with consideration of physiological complexity. Biotechnol. Bioeng. 2013; 110: 153–163. © 2012 Wiley Periodicals, Inc.     

The use of disposable gaas generating kits for the growth of hydrogen-oxidizing bacteria and the determination of hydrogen autotrophy

A simplified procedure for the determination of autotropic growth of hydrogen-oxidizing bacteria has been developed. The method uses commercially available disposable hydrogen and carbon dioxide kits, commonly used in anaerobic bacteriology, to produce a gaseous atmosphre containing by volume approximately 41% hydrogen, 6% carbon dioxide, 11% oxygen and 42% nitrogen. The atmosphere was suitable for the growth of strains assigned to the species Alcaligenes eutrophus, Alcaligenes paradoxus, Paracoccus denitrificans, Pseudomonas facilis, Pseudomonas flava, Pseudomonas palleronii, Pseudomonas saccahrophilia and Rhodococcus sp. (‘Nocardia opaca’). The method can also be used for the screening of hydrogen-oxidizing ability in bacterial isolates, thus eliminating the need for complex gas mixing devices or expensive gas mixtures.     

Characterization of arsenopyrite oxidizing Thiobacillus. Tolerance to arsenite,arsenate, ferrous and ferric iron

Two strains of Thiobacillus, T. ferrooxidans and T. thiooxidans, have been isolated from a bacterial inoculum cultivated during a one-year period in a 1001 continuous laboratory pilot for treatment of an arsenopyrite/pyrite concentrate. The optimum pH for the growth of both strains has been found to be between 1.7 and 2.5. Because of the high metal toxicity in bioleach pulps, the tolerance of T. ferrooxidans and T. thiooxidans with respect to iron and arsenic has been studied. The growth of both strains is inhibited with 10 g/l of ferric ion, 5 g/l of arsenite and 40 g/l of arsenate. 20 g/l of ferrous iron is toxic to T. ferrooxidans but 30 g/l is necessary to impede the growth of T. thiooxidans.     

Preparation of a colored conductive paint electrode for electrochemical inactivation of bacteria

In this study we describe the preparation of a colored conductive paint electrode containing In(2)O(3), SnO(2), or TiO(2) for the electrochemical inactivation of marine bacteria. When each colored conductive paint electrode was immersed in seawater containing 10(6) cells/mL for 90 min, marine microbe attachment to the TiO(2)/SnO(2)/Sb electrode surface was minimal. Preparation of electrodes coated with 40% particles is shown to be more cost-effective, and because of their more translucent coatings they can be painted over with bright colors. When a potential of 1.0 V was applied for 30 min to the colored conductive paint electrode (40 wt% TiO(2)/SnO(2)/Sb) in sterile seawater, the survival ratio decreased to 55%. When 1.5 V vs. saturated calomel electrode (SCE) was applied, all attached cells were inactivated. Chlorine was not detected below an applied potential of 1.5 V. A change in pH was not observed in the range of 0 to 1.5 V. This method might be effective for preventing bacterial cell accumulation and the formation of biofilms.     

生物破乳剂产生菌混合培养及其发酵条件的优化

【目的】对菌株L1和XH1的混合发酵条件进行优化,为混合菌发酵生物破乳剂的实际生产和应用提供理论依据。【方法】利用响应面实验(RSM)的中心组合旋转设计方法(CCRD)针对混合菌的发酵条件进行优化,通过对模型乳状液进行破乳实验,以排油率作为发酵液破乳效能的评价标准。【结果】经模型的分析与验证,确定最佳发酵条件为：种子液比例(L1:XH1)为3:2,葡萄糖投加时间为第4天,投加葡萄糖后再培养21 h,液体石蜡含量3.6% (体积比)。【结论】与破乳菌XH1和L1单独培养相比,经混合培养后获得复合生物破乳剂具有投加量少、破乳接触时间短的优势。同时双株破乳菌复配培养有效地提高了培养基中主要营养物质的利用率,减少了对底物的浪费。     

锰氧化细菌的生理生态功能与作用机制研究进展

锰的生物地球化学循环过程与全球尺度的营养元素循环紧密联系,是影响全球生态平衡及气候变化的重要因素之一。在自然界中,锰元素主要以氧化锰和含氧酸盐的矿物形式存在,近年来的研究观点普遍认为细菌介导的氧化作用是自然环境中锰氧化物形成的主要原因。锰氧化细菌广泛分布于海洋、锰矿土壤等生态系统,近期在植物微生态系统中也被发现,其生理生态功能未知。细菌的锰氧化过程是一个复杂的过程,多铜氧化酶和过氧化物(氢)酶是参与该过程的主要酶类,但关于其催化机制的认识尚不成熟。本综述系统探讨锰氧化细菌的种类和分布、细菌锰氧化作用的生理生态功能、参与细菌锰氧化作用的功能酶及其分子机制,总结这一研究领域所取得的成果和仍未解决的科学问题,并对今后的发展方向进行展望。     

Wireless bioreactor for anaerobic cultivation of bacteria

Anaerobic cultivation methods of bacteria are indispensable in microbiology. One methodology is to cultivate the microbes in anaerobic enclosure with oxygen-adosrbing chemicals. Here, we report an electronic extension of such strategy for facultative anaerobic bacteria. The technique is based a bioreactor with entire operation including turbidity measurement, fluidic mixing, and gas delivery in an anaerobic enclosure. Wireless data transmission is employed and the anaerobic condition is achieved with gas pack. Although the technique is not meant to completely replace the anaerobic chamber for strict anaerobic bacteria, it provides a convenient way to bypass the cumbersome operation in anaerobic chamber for facultative anaerobic bacteria. Such a cultivation strategy is demonstrated with Escherichia coli with different carbon sources and hydrogen as energy source.