Does functional homogenization accompany taxonomic homogenization of British birds and how do biotic factors and climate affect these processes?

Environmental change has reshuffled communities often causing taxonomic homogenization rather than differentiation. Some studies suggest that this increasing similarity of species composition between communities is accompanied by an increase in similarity of trait composition—functional homogenization—although different methodologies have failed to come to any consistent conclusions. Functional homogenization could have a large effect on ecosystem functioning and stability. Here, we use the general definition of homogenization as “reduced spatial turnover over time” to compare changes in Simpson's beta diversity (taxonomic turnover) with changes in Rao's quadratic entropy beta diversity (functional turnover) in British breeding birds at three spatial scales. Using biotic and climatic variables, we identify which factors may predispose a site to homogenization. The change in turnover measures between two time periods, 20 years apart, was calculated. A null model approach was taken to identify occurrences of functional homogenization and differentiation independent of changes in taxonomic turnover. We used conditional autoregressive models fitted using integrated nested Laplace approximations to determine how environmental drivers and factors relating to species distributions affect changes in spatial turnover of species and functional diversity. The measurement of functional homogenization affects the chance of rejection of the null models, with many sites showing taxonomic homogenization unaccompanied by functional homogenization, although occurrence varies with spatial scale. At the smallest scale, while temperature‐related variables drive changes in taxonomic turnover, changes in functional turnover are associated with variation in growing degree days; however, changes in functional turnover become more difficult to predict at larger spatial scales. Our results highlight the multifactorial processes underlying taxonomic and functional homogenization and that redundancy in species traits may allow ecosystem functioning to be maintained in some areas despite changes in species composition.     

Global biogeography and ecology of body size in birds

In 1847, Karl Bergmann proposed that temperature gradients are the key to understanding geographic variation in the body sizes of warm-blooded animals. Yet both the geographic patterns of body-size variation and their underlying mechanisms remain controversial. Here, we conduct the first assemblage-level global examination of 'Bergmann's rule' within an entire animal class. We generate global maps of avian body size and demonstrate a general pattern of larger body sizes at high latitudes, conforming to Bergmann's rule. We also show, however, that median body size within assemblages is systematically large on islands and small in species-rich areas. Similarly, while spatial models show that temperature is the single strongest environmental correlate of body size, there are secondary correlations with resource availability and a strong pattern of decreasing body size with increasing species richness. Finally, our results suggest that geographic patterns of body size are caused both by adaptation within lineages, as invoked by Bergmann, and by taxonomic turnover among lineages. Taken together, these results indicate that while Bergmann's prediction based on physiological scaling is remarkably accurate, it is far from the full picture. Global patterns of body size in avian assemblages are driven by interactions between the physiological demands of the environment, resource availability, species richness and taxonomic turnover among lineages.     

Functional groups of lagoon fish species in Languedoc Roussillon, southern France

Ten functional traits of fish species were related to habitat, diet or food acquisition, to propose a classification of 21 lagoon fishes into 10 functional groups. The selection of traits was based on their functional interest and the ease of measurement. Some groups were taxonomically related containing species belonging to the same genus, e.g . Syngnathus , Atherina or Pomatochistus . Species with a flat body shape constituted another group and three species ( Anguilla anguilla , Gambusia affinis and Callionymus pusillus ) formed individual groups. These results could be used to constitute functional units and to simplify such complex ecosystems and their interactions.     

中国鸟类的生活史和生态学特征数据集

中国现有1,445种鸟类, 是世界上鸟类物种数最多的国家之一。物种特征反映了生物有机体的功能和适合度, 在生态学、进化生物学和保护生物学研究中具有重要作用。但是, 目前还没有关于我国鸟类生活史、生态学和地理分布等物种特征的完整数据库。通过系统查阅文献和各种数据资料, 本文共收集整理出了中国1,445种鸟类17个功能特征数据: 体重、体长、嘴峰长、翅长、尾长、跗蹠长、食性、窝卵数、卵大小、卵体积、巢址、巢的类型、集群状况、迁徙状况、是否特有种、地理分布范围和分布省份等。在这些特征中, 除迁徙状况、是否特有种、地理分布范围和分布省份外, 其余特征数据均存在不同程度的缺失, 数据的完整度为60.83%‒100%。本数据库是目前关于中国鸟类最新和最全的物种特征数据库, 期望能为我国鸟类生态学、进化生物学、生物地理学、保护生物学等研究提供支持。     

Lack of phylogeographic structure in three widespread Australian birds reinforces emerging challenges in Australian historical biogeography

Aims Building on molecular studies of widespread Australian vertebrates, we tested whether each of three widespread Australian bird species, namely the singing honeyeater, Lichenostomus virescens, spiny‐cheeked honeyeater, Acanthagenys rufogularis (Passeriformes: Meliphagidae), and black‐faced woodswallow, Artamus cinereus (Passeriformes: Artamidae), has undergone a recent (Pleistocene) range expansion across the Australian continent. We related the findings to the presence or absence of geographic variation in each species’ external phenotype and whether historical or non‐historical factors have been involved in generating variation. Methods A total of 92 specimens of the three species were collected from, as far as possible, the same localities across Australia. They were sampled for mitochondrial DNA (mtDNA) diversity in the 1041 base pairs of the ND2 gene, and these data were analysed with nucleotide diversity statistics, unrooted networks, nested clade analysis, and tests of range expansion or stability. Results Range expansions could not be rejected in any of the species in our study. Each had low, geographically unstructured nucleotide diversity. Patterns of geographic variation in the singing honeyeater's and, to a lesser extent, the black‐faced woodswallow's external phenotypes are not correlated with mtDNA diversity in ND2. Main conclusions Our study adds to the increasing number of data sets suggesting the apparent prevalence of Pleistocene population expansions in widespread Australian birds. Furthermore, it shows that observable geographic structure may evolve very quickly, in response either to environmental gradients or to historical factors that operated too recently to be detected by ND2 sequences (e.g. in the singing honeyeater). Conversely, we have shown that a species that has had a recent population expansion need not necessarily be geographically invariant. To understand fully the interplay between vicariance and dispersal in the history of widespread Australian arid‐zone birds, or between the historical and non‐historical origins of their differentiation, carefully conducted case‐by‐case molecular studies will be necessary. Only then will biogeographical patterns and the processes that led to them emerge. Study of the historical biogeography and the more recent population history of Australian arid‐zone birds has reached a point where mtDNA‐based studies, while still informative and contributing to a growing data base of such work, should be complemented with data from multiple, rapidly evolving nuclear loci.     

Evolution of terrestrial birds in three continents: biogeography and parallel radiations

Aim To reconstruct the biogeographical history of a large clade of mainly terrestrially adapted birds (coraciiform and piciform birds, owls, diurnal raptors, New World vultures, trogons, mousebirds, cuckoo‐rollers, seriemas, parrots and passerines) to test the hypothesis of its Gondwanan origin. Location Global. Methods The phylogenetic tree used in the analysis was a family‐level tree estimated from previously published nuclear DNA sequence data. Each family for which a thorough and taxonomically well‐sampled phylogenetic analysis exists was subject to an initial dispersal–vicariance analysis in order to reconstruct ancestral areas for its two most basal lineages. Both basal lineages were then used to represent the family in the subsequent reconstruction of ancestral distributions for the entire radiation. Results The analysis showed that three reciprocally monophyletic groups of terrestrial birds have diversified in the Gondwanan land areas of Australia, South America and Africa, respectively. Although each of these three groups may also have originally included other groups, the only survivors today from the Australian radiation are the passerines and parrots, while the falcons and seriemas have survived from the South American radiation. The group of survivors from the African radiation is considerably more taxonomically diverse and includes all coraciiform and piciform birds, owls, diurnal raptors (except falcons), New World vultures, trogons, mousebirds and cuckoo‐rollers. Main conclusions The outlined evolutionary scenario with three geographically isolated clades of terrestrial birds is consistent with the available estimates of Late Cretaceous to early Palaeogene dates for these radiations. The diversifications and ecological adaptations within each of the three groups most likely took place in isolation on the different continents. Many cases of convergently evolved adaptations may be revealed through the increased understanding of the phylogenetic relationships of terrestrial birds.     

The influence of biogeographic history on the functional and phylogenetic diversity of passerine birds in savannas and forests of the Brazilian Amazon

Passeriformes is the largest and most diverse avian order in the world and comprises the Passeri and Tyranni suborders. These suborders constitute a monophyletic group, but differ in their ecology and history of occupation of South America. We investigated the influence of biogeographic history on functional and phylogenetic diversities of Passeri and Tyranni in forest and savanna habitats in the Brazilian Amazon. We compiled species composition data for 34 Passeriformes assemblages, 12 in savannas and 22 in forests. We calculated the functional (Rao's quadratic entropy, FD_Q) and phylogenetic diversities (mean pairwise distance, MPD, and mean nearest taxon distance, MNTD), and the functional beta diversity to investigate the potential role of biogeographic history in shaping ecological traits and species lineages of both suborders. The functional diversity of Passeri was higher than for Tyranni in both habitats. The MPD for Tyranni was higher than for Passeri in forests; however, there was no difference between the suborders in savannas. In savannas, Passeri presented higher MNTD than Tyranni, while in forest areas, Tyranni assemblages showed higher MNTD than Passeri. We found a high functional turnover (~75%) between Passeri and Tyranni in both habitats. The high functional diversity of Passeri in both habitats is due to the high diversity of ecological traits exhibited by species of this group, which enables the exploitation of a wide variety of resources and foraging strategies. The higher Tyranni MPD and MNTD in forests is likely due to Tyranni being older settlers in this habitat, resulting in the emergence and persistence of more lineages. The higher Passeri MNTD in savannas can be explained by the existence of a larger number of different Passeri lineages adapted to this severe habitat. The high functional turnover between the suborders in both habitats suggests an ecological strategy to avoid niche overlap.     

Human-related processes drive the richness of exotic birds in Europe

Both human-related and natural factors can affect the establishment and distribution of exotic species. Understanding the relative role of the different factors has important scientific and applied implications. Here, we examined the relative effect of human-related and natural factors in determining the richness of exotic bird species established across Europe. Using hierarchical partitioning, which controls for covariation among factors, we show that the most important factor is the human-related community-level propagule pressure (the number of exotic species introduced), which is often not included in invasion studies due to the lack of information for this early stage in the invasion process. Another, though less important, factor was the human footprint (an index that includes human population size, land use and infrastructure). Biotic and abiotic factors of the environment were of minor importance in shaping the number of established birds when tested at a European extent using 50 x 50 km2 grid squares. We provide, to our knowledge, the first map of the distribution of exotic bird richness in Europe. The richest hotspot of established exotic birds is located in southeastern England, followed by areas in Belgium and The Netherlands. Community-level propagule pressure remains the major factor shaping the distribution of exotic birds also when tested for the UK separately. Thus, studies examining the patterns of establishment should aim at collecting the crucial and hard-to-find information on community-level propagule pressure or develop reliable surrogates for estimating this factor. Allowing future introductions of exotic birds into Europe should be reconsidered carefully, as the number of introduced species is basically the main factor that determines the number established.     

Functional traits reveal the expansion and packing of ecological niche space underlying an elevational diversity gradient in passerine birds

Variation in species richness across environmental gradients may be associated with an expanded volume or increased packing of ecological niche space. However, the relative importance of these alternative scenarios remains unknown, largely because standardized information on functional traits and their ecological relevance is lacking for major diversity gradients. Here, we combine data on morphological and ecological traits for 523 species of passerine birds distributed across an Andes-to-Amazon elevation gradient. We show that morphological traits capture substantial variation in species dietary (75%) and foraging niches (60%) when multiple independent trait dimensions are considered. Having established these relationships, we show that the 14-fold increase in species richness towards the lowlands is associated with both an increased volume and density of functional trait space. However, we find that increases in volume contribute little to changes in richness, with most (78%) lowland species occurring within the range of trait space occupied at high elevations. Taken together, our results suggest that high species richness is mainly associated with a denser occupation of functional trait space, implying an increased specialization or overlap of ecological niches, and supporting the view that niche packing is the dominant trend underlying gradients of increasing biodiversity towards the lowland tropics.     

Global loss of avian evolutionary uniqueness in urban areas

Urbanization, one of the most important anthropogenic impacts on Earth, is rapidly expanding worldwide. This expansion of urban land‐covered areas is known to significantly reduce different components of biodiversity. However, the global evidence for this effect is mainly focused on a single diversity measure (species richness) with a few local or regional studies also supporting reductions in functional diversity. We have used birds, an important ecological group that has been used as surrogate for other animals, to investigate the hypothesis that urbanization reduces the global taxonomical and/or evolutionary diversity. We have also explored whether there is evidence supporting that urban bird communities are evolutionarily homogenized worldwide in comparison with nonurban ones by means of using evolutionary distinctiveness (how unique are the species) of bird communities. To our knowledge, this is the first attempt to quantify the effect of urbanization in more than one single diversity measure as well as the first time to look for associations between urbanization and phylogenetic diversity at a large spatial scale. Our findings show a strong and globally consistent reduction in taxonomic diversity in urban areas, which is also synchronized with the evolutionary homogenization of urban bird communities. Despite our general patterns, we found some regional differences in the intensity of the effect of cities on bird species richness or evolutionary distinctiveness, suggesting that conservation efforts should be adapted locally. Our findings might be useful for conservationists and policymakers to minimize the impact of urban development on Earth's biodiversity and help design more realistic conservation strategies.     

Fish communities diverge in species but converge in traits over three decades of warming

Describing the spatial and temporal dynamics of communities is essential for understanding the impacts of global environmental change on biodiversity and ecosystem functioning. Trait‐based approaches can provide better insight than species‐based (i.e. taxonomic) approaches into community assembly and ecosystem functioning, but comparing species and trait dynamics may reveal important patterns for understanding community responses to environmental change. Here, we used a 33‐year database of fish monitoring to compare the spatio‐temporal dynamics of taxonomic and trait structure in North Sea fish communities. We found that the majority of variation in both taxonomic and trait structure was explained by a pronounced spatial gradient, with distinct communities in the southern and northern North Sea related to depth, sea surface temperature, salinity and bed shear stress. Both taxonomic and trait structure changed significantly over time; however taxonomically, communities in the south and north diverged towards different species, becoming more dissimilar over time, yet they converged towards the same traits regardless of species differences. In particular, communities shifted towards smaller, faster growing species with higher thermal preferences and pelagic water column position. Although taxonomic structure changed over time, its spatial distribution remained relatively stable, whereas in trait structure, the southern zone of the North Sea shifted northward and expanded, leading to homogenization. Our findings suggest that global environmental change, notably climate warming, will lead to convergence towards traits more adapted for novel environments regardless of species composition.     

Conservation biogeography in North-east India: hierarchical analysis of cross-taxon distributional congruence

Distributional similarity (congruence) between phylogenetically independent taxonomic groups has important biogeographical as well as conservation implications. When multiple groups show congruence, one or two of them can be used as surrogates of diversity in others; thus, simplifying some of the challenges of area prioritization for conservation action. Here we test for congruence in complementarity between amphibians, reptiles and birds across seven tropical rainforest sites in the Eastern Himalaya and Indo-Burma global biodiversity hotspots. The results show that while frogs and lizards are strongly congruent with each other, birds as a whole do not show congruence with either of them. However, certain bird subgroups delineated on the basis of broad ecological niche and life history attributes are significantly congruent with both frogs and lizards. Multiple Mantel regression between environmental variable and species distribution dissimilarity matrices indicate that along with differential response to between-site ecological differences, inherent life-history characteristics shared by certain groups contributes to observed patterns of congruence. Our analyses indicate that examining biologically distinct subsets of larger groups can improve the resolution of congruence analyses. This approach can refine area-prioritization initiatives by revealing fine-scale discordances between otherwise concordant groups, and vice versa. Given that monetary resources do not always allow inclusion of multiple groups in biodiversity inventorying efforts, performing such analyses also makes economic sense because it can provide better resolution even with single-group data. In the context of conservation in North-east India, the results highlight the biogeographical complexity of the region, and also point at future priorities for biodiversity inventorying and conservation prioritization, both in terms of areas as well as taxonomic groups.     

Convergent elevation trends in canopy chemical traits of tropical forests

The functional biogeography of tropical forests is expressed in foliar chemicals that are key physiologically based predictors of plant adaptation to changing environmental conditions including climate. However, understanding the degree to which environmental filters sort the canopy chemical characteristics of forest canopies remains a challenge. Here, we report on the elevation and soil‐type dependence of forest canopy chemistry among 75 compositionally and environmentally distinct forests in nine regions, with a total of 7819 individual trees representing 3246 species collected, identified and assayed for foliar traits. We assessed whether there are consistent relationships between canopy chemical traits and both elevation and soil type, and evaluated the general role of phylogeny in mediating patterns of canopy traits within and across communities. Chemical trait variation and partitioning suggested a general model based on four interconnected findings. First, geographic variation at the soil‐Order level, expressing broad changes in fertility, underpins major shifts in foliar phosphorus (P) and calcium (Ca). Second, elevation‐dependent shifts in average community leaf dry mass per area (LMA), chlorophyll, and carbon allocation (including nonstructural carbohydrates) are most strongly correlated with changes in foliar Ca. Third, chemical diversity within communities is driven by differences between species rather than by plasticity within species. Finally, elevation‐ and soil‐dependent changes in N, LMA and leaf carbon allocation are mediated by canopy compositional turnover, whereas foliar P and Ca are driven more by changes in site conditions than by phylogeny. Our findings have broad implications for understanding the global ecology of humid tropical forests, and their functional responses to changing climate.