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1.
Forest fragmentation and habitat loss are among the major current extinction causes. Remaining fragments are mostly small, isolated and showing poor quality. Being primarily arboreal, Neotropical primates are generally sensitive to fragmentation effects. Furthermore, primates are involved in complex ecological process. Thus, landscape changes that negatively interfere with primate population dynamic affect the structure, composition, and ultimately the viability of the whole community. We evaluated if fragment size, isolation and visibility and matrix permeability are important for explaining the occurrence of three Neotropical primate species. Employing playback, we verified the presence of Callicebus nigrifrons, Callithrix aurita and Sapajus nigritus at 45 forest fragments around the municipality of Alfenas, Brazil. We classified the landscape and evaluated the metrics through predictive models of occurrence. We selected the best models through Akaike Selection Criterion. Aiming at validating our results, we applied the plausible models to another region (20 fragments at the neighboring municipality of Poço Fundo, Brazil). Twelve models were plausible, and three were validated, two for Sapajus nigritus (Area and Area+Visibility) and one for Callicebus nigrifrons (Area+Matrix). Our results reinforce the contribution of fragment size to maintain biodiversity within highly degraded habitats. At the same time, they stress the importance of including novel, biologically relevant metrics in landscape studies, such as visibility and matrix permeability, which can provide invaluable help for similar studies in the future and on conservation practices in the long run.  相似文献   

2.
Dense granular bodies (DGB) are particular structural constituents observed in cell nuclei of different tissues—liver, pancreas, brown adipose tissue, adrenal cortex—of hibernating dormice. They appear as strongly electron-dense clusters of closely packed granules, with thin fibrils spreading out at their periphery. DGB always occur in the nucleoplasm, sometimes making contact with other nuclear structural constituents typical of the hibernating state, such as coiled bodies, amorphous bodies and nucleoplasmic fibrils. DGB are present only during deep hibernation and rapidly disappear upon arousal from hibernation. Cytochemical and immunocytochemical analyses showed that DGB contain ribonucleoproteins and several nucleoplasmic RNA processing factors, suggesting that DGB can represent accumulation sites of splicing factors which are provided to splicing sites when normal metabolic activity is rapidly restored during arousal.  相似文献   

3.
We compared probability surfaces derived using one set of environmental variables in three Geographic Information Systems (GIS) -based approaches: logistic regression and Akaike's Information Criterion (AIC),Multiple Criteria Evaluation (MCE),and Bayesian Analysis (specifically Dempster-Shafer theory). We used lynx Lynx canadensis as our focal species,and developed our environment relationship model using track data collected in Banff National Park,Alberta,Canada,during winters from 1997 to 2000. The accuracy of the three spatial models were compared using a contingency table method. We determined the percentage of cases in which both presence and absence points were correctly classified (overall accuracy),the failure to predict a species where it occurred (omission error) and the prediction of presence where there was absence (commission error). Our overall accuracy showed the logistic regression approach was the most accurate (74.51% ). The multiple criteria evaluation was intermediate (39.22%),while the Dempster-Shafer (D-S) theory model was the poorest (29.90%). However,omission and commission error tell us a different story: logistic regression had the lowest commission error,while D-S theory produced the lowest omission error. Our results provide evidence that habitat modellers should evaluate all three error measures when ascribing confidence in their model. We suggest that for our study area at least,the logistic regression model is optimal. However,where sample size is small or the species is very rare,it may also be useful to explore and/or use a more ecologically cautious modelling approach (e.g. Dempster-Shafer) that would over-predict,protect more sites,and thereby minimize the risk of missing critical habitat in conservation plans.  相似文献   

4.
基于景观敏感度的森林公园景点评价   总被引:3,自引:0,他引:3  
周锐  李月辉  胡远满  刘淼 《应用生态学报》2008,19(11):2460-2466
采用GIS空间分析技术,结合地形特征,选择相对坡度、相对距离、互视性、视觉几率和醒目程度5个分量,基于景观敏感度的测定原理和方法,对猴石国家森林公园内的主要景点进行了景观敏感度定量评价.结果表明:在猴石公园现有的23个景点中,景观敏感度综合评价为Ⅰ级的景点0个;景观敏感度综合评价为Ⅱ级的景点10个,占景点总数的43.5%,这类景点及其周围景观均需受到严格保护,以维持景观的自然特征;景观敏感度综合评价为Ⅲ级的景点有8个,占景点总数的34.8%,这类景点周围可结合自然景观发展人文景观,建设较宽的游览道,也可开发小规模的人工建筑,但建筑风格应与周围的自然景观协调统一,即在保护好自然景观的同时,实施开发建设;景观敏感度综合评价为Ⅳ和Ⅴ级的景点共计5个,占景点总数的21.7%,这两类景点周围可开展更大规模的综合性旅游设施和游道建设,为自然景观增色生辉.通过多角度定量化的景观敏感度评价,丰富了景观视觉评价和景观感知研究的理论,同时,为旅游区及森林公园总体开发建设和景观规划提供了重要依据和科学指导.  相似文献   

5.
G. Matessi  G. Bogliani 《Bird Study》2013,60(2):184-194
Artificial nest predation experiments were carried out in northern Italy in woods which varied in size, isolation and surrounding landscape structure. Multivariate analyses, including logistic regression, showed that: (1) size and isolation of woods did not significantly affect predation rates; (2) nests on the edge of woods did not suffer higher predation rates than nests inside the wood; (3) nest camouflage greatly influenced predation rates, suggesting that predators were mainly using visual clues to identify nests; (4) the type of habitat that surrounded the woods emerged as a crucial factor in nest survival and the amount of human settlements in the vicinity of the wood was inversely correlated with nest survival, probably due to predators associated with humans; (5) other habitat variables, which were apparently individually unimportant, were found to have an effect on nesting success, if combined in a single ‘suitability index’. It is impossible to generalize about the influence of landscape fragmentation on nest predation because local landscape history and predator guilds, together with the scale of fragmentation, probably interact to determine the suitability of nest sites and their vulnerability to predators.  相似文献   

6.
Long-range visibility of greater sage grouse leks: a GIS-based analysis   总被引:1,自引:0,他引:1  
We investigated whether male greater sage grouse, Centrocercus urophasianus, select lek locations on the basis of topographic features that affect their visibility to both conspecific females and a major avian predator, the golden eagle, Aquila chrysaetos. We mapped locations of displaying males at all leks in a local population and used a Geographic Information System (GIS) and digital elevation model (DEM) to generate ‘viewsheds’ around male locations within a boundary set by the estimated maximal visual acuity of the viewer. Areas visible around leks were compared to those visible around random sites with the same conformation of displaying males. Male sage grouse displayed at sites where surrounding topography both diminished long-range visibility (>1000 m) and enhanced short-range visibility (<500 m) to ground observers. These characteristics could (1) force eagles to monitor lek activity from the air, where they may be more visible to their prey, (2) make displaying males more visible to females and (3) allow males to monitor predators approaching the lek more easily. These results suggest that, in open habitats, visually signalling animals may exploit local topography to control both their visibility to receivers and the visibility of their immediate surroundings.  相似文献   

7.
Human-altered environments often challenge native species with a complex spatial distribution of resources. Hostile landscape features can inhibit animal movement (i.e., genetic exchange), while other landscape attributes facilitate gene flow. The genetic attributes of organisms inhabiting such complex environments can reveal the legacy of their movements through the landscape. Thus, by evaluating landscape attributes within the context of genetic connectivity of organisms within the landscape, we can elucidate how a species has coped with the enhanced complexity of human altered environments. In this research, we utilized genetic data from eastern chipmunks (Tamias striatus) in conjunction with spatially explicit habitat attribute data to evaluate the realized permeability of various landscape elements in a fragmented agricultural ecosystem. To accomplish this we 1) used logistic regression to evaluate whether land cover attributes were most often associated with the matrix between or habitat within genetically identified populations across the landscape, and 2) utilized spatially explicit habitat attribute data to predict genetically-derived Bayesian probabilities of population membership of individual chipmunks in an agricultural ecosystem. Consistency between the results of the two approaches with regard to facilitators and inhibitors of gene flow in the landscape indicate that this is a promising new way to utilize both landscape and genetic data to gain a deeper understanding of human-altered ecosystems.  相似文献   

8.
9.
We studied factors affecting breeding habitat selection in a population of cliff-nesting peregrines Falco peregrinus across multiple spatial levels (cliff site, cliff context and land-use of the surrounding landscape), over a 2,100 km2 study area in the Alps (Italy and Switzerland). We detected 30 breeding pairs (density: 1.43 territorial pairs/100 km2), whose territories were uniformly distributed over the study area. We compared 15 habitat features characterising occupied cliffs and 30 randomly selected unoccupied cliffs by means of stepwise forward logistic regression and hierarchical partitioning. The logistic regression analysis showed that occupied cliffs were longer (horizontal length), steeper, and had a greater extension of urban areas in the surrounding landscape compared to non-occupied cliffs. The model had a discrimination ability of 0.95. Hierarchical partitioning indicated that the logistic regression model was appropriate. Neither the distance of cliffs to the nearest site occupied by a potential competitor and predator, the eagle owl Bubo bubo, which occurred at a low density (0.67 pairs/100 km2), nor the distance to the nearest site occupied by peregrines had any effect on the cliff suitability model. Therefore, habitat selection in cliff-nesting peregrines was mainly influenced by cliff site features and surrounding landscape characteristics, whereas the proximity to conspecifics and to an intraguild predator had no apparent effects on peregrine settlement in our study population.  相似文献   

10.
Odonates contribute highly to global biodiversity and are considered good indicators of environmental quality, but they are under-studied and quantitative information on their habitat associations is lacking. Our objective was to examine the effects of landscape configuration on site occupancy and movement dynamics of four odonate species in Iowa: Tramea onusta, Epitheca princeps, Pantala flavescens, and Calopteryx maculata. We conducted standardized visual encounter surveys for odonates at 233 public properties in Iowa from 2007 to 2011 and computed landscape variables within a 200, 600 m, and 1 km radius of each surveyed site. Using a robust design occupancy model in Program MARK, we estimated detection probability and site occupancy, site extinction, and site colonization probabilities for each species. We found few significant effects of landscape variables on site occupancy, extinction, or colonization, although landscape variables at 600 m were included in the best model for all species. Detection probability (SE) ranged from 0.30 (0.04) for Pantala flavescens to 0.49 (0.04) for Calopteryx maculata. Our study provides information to aid habitat restoration and management efforts on sites having suitable characteristics in the surrounding landscape and ultimately help conserve odonates.  相似文献   

11.
A total of 552 individuals of Rioraja agassizi (257 females and 295 males) were collected by bottom-trawl during research cruises. Sexual dimorphism was observed with females are heavier than males for a given total length (TL). Using logistic regression, it was determined that TL at 50% maturity of males was 475 mm TL and of females 520 mm TL. This estimation agrees with the morphological parameters measured. Although not statistically significant, a peak in reproductive activity was observed in males during late spring and summer. The monthly variation in the gonadosomatic index and oviducal gland width, together with the largest diameter of ovarian follicles, suggests that R. agassizi females have a partially defined annual reproductive cycle with two peaks, one from November (spring) to February (summer) and another in July (winter).  相似文献   

12.
The distribution of genetic variation is determined through the interaction of life history, morphology and habitat specificity of a species in conjunction with landscape structure. While numerous studies have investigated this interplay of factors in species inhabiting aquatic, riverine, terrestrial, arboreal and saxicolous systems, the fossorial system has remained largely unexplored. In this study we attempt to elucidate the impacts of a subterranean lifestyle coupled with a heterogeneous landscape on genetic partitioning by using a subterranean mammal species, the Cape dune mole-rat (Bathyergus suillus), as our model. Bathyergus suillus is one of a few mammal species endemic to the Cape Floristic Region (CFR) of the Western Cape of South Africa. Its distribution is fragmented by rivers and mountains; both geographic phenomena that may act as geographical barriers to gene-flow. Using two mitochondrial fragments (cytochrome b and control region) as well as nine microsatellite loci, we determined the phylogeographic structure and gene-flow patterns at two different spatial scales (local and regional). Furthermore, we investigated genetic differentiation between populations and applied Bayesian clustering and assignment approaches to our data. Nearly every population formed a genetically unique entity with significant genetic structure evident across geographic barriers such as rivers (Berg, Verlorenvlei, Breede and Gourits Rivers), mountains (Piketberg and Hottentots Holland Mountains) and with geographic distance at both spatial scales. Surprisingly, B. suillus was found to be paraphyletic with respect to its sister species, B. janetta–a result largely overlooked by previous studies on these taxa. A systematic revision of the genus Bathyergus is therefore necessary. This study provides a valuable insight into how the biology, life-history and habitat specificity of animals inhabiting a fossorial system may act in concert with the structure of the surrounding landscape to influence genetic distinctiveness and ultimately speciation.  相似文献   

13.
The PDZ and LIM domain 5 (PDLIM5) gene may play a role in cancer, bipolar disorder, major depression, alcohol dependence and schizophrenia; however, little is known about the interaction effect of steroid and PDLIM5 gene on cancer. This study examined 47 single-nucleotide polymorphisms (SNPs) within the PDLIM5 gene in the Marshfield sample with 716 cancer patients (any diagnosed cancer, excluding minor skin cancer) and 2848 noncancer controls. Multiple logistic regression model in PLINK software was used to examine the association of each SNP with cancer. Bayesian logistic regression in PROC GENMOD in SAS statistical software, ver. 9.4 was used to detect gene–steroid interactions influencing cancer. Single marker analysis using PLINK identified 12 SNPs associated with cancer (P < 0.05); especially, SNP rs6532496 revealed the strongest association with cancer (P = 6.84 × 10?3); while the next best signal was rs951613 (P = 7.46 × 10?3). Classic logistic regression in PROC GENMOD showed that both rs6532496 and rs951613 revealed strong gene–steroid interaction effects (OR = 2.18, 95% CI = 1.31?3.63 with P = 2.9 × 10?3 for rs6532496 and OR = 2.07, 95% CI = 1.24 ?3.45 with P = 5.43 × 10?3 for rs951613, respectively). Results from Bayesian logistic regression showed stronger interaction effects (OR = 2.26, 95% CI = 1.2 ?3.38 for rs6532496 and OR = 2.14, 95% CI = 1.14 ?3.2 for rs951613, respectively). All the 12 SNPs associated with cancer revealed significant gene–steroid interaction effects (P < 0.05); whereas 13 SNPs showed gene–steroid interaction effects without main effect on cancer. SNP rs4634230 revealed the strongest gene–steroid interaction effect (OR = 2.49, 95% CI = 1.5 ?4.13 with P = 4.0 × 10?4 based on the classic logistic regression and OR = 2.59, 95% CI = 1.4 ?3.97 from Bayesian logistic regression; respectively). This study provides evidence of common genetic variants within the PDLIM5 gene and interactions between PLDIM5 gene polymorphisms and steroid use influencing cancer.  相似文献   

14.
The Asiatic black bear population in Dachigam landscape, Jammu and Kashmir is well recognized as one of the highest density bear populations in India. Increasing incidences of bear-human interactions and the resultant retaliatory killings by locals have become a serious threat to the survivorship of black bears in the Dachigam landscape. The Department of Wildlife Protection in Jammu and Kashmir has been translocating bears involved in conflicts, henceforth ‘conflict bears’ from different sites in Dachigam landscape to Dachigam National Park as a flagship activity to mitigate conflicts. We undertook this study to investigate the population genetics and the fate of bear translocation in Dachigam National Park. We identified 109 unique genotypes in an area of ca. 650 km2 and observed bear population under panmixia that showed sound genetic variability. Molecular tracking of translocated bears revealed that mostly bears (7 out of 11 bears) returned to their capture sites, possibly due to homing instincts or habituation to the high quality food available in agricultural croplands and orchards, while only four bears remained in Dachigam National Park after translocation. Results indicated that translocation success was most likely to be season dependent as bears translocated during spring and late autumn returned to their capture sites, perhaps due to the scarcity of food inside Dachigam National Park while bears translocated in summer remained in Dachigam National Park due to availability of surplus food resources. Thus, the current management practices of translocating conflict bears, without taking into account spatio-temporal variability of food resources in Dachigam landscape seemed to be ineffective in mitigating conflicts on a long-term basis. However, the study highlighted the importance of molecular tracking of bears to understand their movement patterns and socio-biology in tough terrains like Dachigam landscape.  相似文献   

15.
Unbiased estimates of burrowing owl populations (Athene cunicularia) are essential to achieving diverse management and conservation objectives. We conducted visibility trials and developed logistic regression models to identify and correct for visibility bias associated with single, vehicle-based, visual survey occasions of breeding male owls during daylight hours in an agricultural landscape in California between 30 April and 2 May 2007. Visibility was predicted best by a second-degree polynomial function of time of day and 7 categorical perch types. Probability of being visible was highest in the afternoon, and individuals that flushed, flew, or perched on hay bales were highly visible (>0.85). Visibility was lowest in agricultural fields (<0.46) and nonagricultural vegetation (<0.77). We used the results from this model to compute unbiased maximum likelihood estimates of visibility bias, and combined these with estimated probabilities of availability bias to validate our model by correcting for visibility and availability biases in 4 independent datasets collected during morning hours. Correcting for both biases produced reliable estimates of abundance in all 4 independent validation datasets. We recommend that estimates of burrowing owl abundance from surveys in the southwest United States correct for both visibility and availability biases. © 2011 The Wildlife Society.  相似文献   

16.
Extrapolating landscape regression models for use in assessing vector-borne disease risk and other applications requires thoughtful evaluation of fundamental model choice issues. To examine implications of such choices, an analysis was conducted to explore the extent to which disparate landscape models agree in their epidemiological and entomological risk predictions when extrapolated to new regions. Agreement between six literature-drawn landscape models was examined by comparing predicted county-level distributions of either Lyme disease or Ixodes scapularis vector using Spearman ranked correlation. AUC analyses and multinomial logistic regression were used to assess the ability of these extrapolated landscape models to predict observed national data. Three models based on measures of vegetation, habitat patch characteristics, and herbaceous landcover emerged as effective predictors of observed disease and vector distribution. An ensemble model containing these three models improved precision and predictive ability over individual models. A priori assessment of qualitative model characteristics effectively identified models that subsequently emerged as better predictors in quantitative analysis. Both a methodology for quantitative model comparison and a checklist for qualitative assessment of candidate models for extrapolation are provided; both tools aim to improve collaboration between those producing models and those interested in applying them to new areas and research questions.  相似文献   

17.
BackgroundInfants are at highest risk of pneumococcal disease. Their added protection through herd effects is a key part in the considerations on optimal pneumococcal vaccination strategies. Yet, little is currently known about the main transmission pathways to this vulnerable age group. Hence, this study investigates pneumococcal transmission routes to infants in the coastal city of Nha Trang, Vietnam.Methods and findingsIn October 2018, we conducted a nested cross-sectional contact and pneumococcal carriage survey in randomly selected 4- to 11-month-old infants across all 27 communes of Nha Trang. Bayesian logistic regression models were used to estimate age specific carriage prevalence in the population, a proxy for the probability that a contact of a given age could lead to pneumococcal exposure for the infant. We used another Bayesian logistic regression model to estimate the correlation between infant carriage and the probability that at least one of their reported contacts carried pneumococci, controlling for age and locality. In total, 1,583 infants between 4 and 13 months old participated, with 7,428 contacts reported. Few infants (5%, or 86 infants) attended day care, and carriage prevalence was 22% (353 infants). Most infants (61%, or 966 infants) had less than a 25% probability to have had close contact with a pneumococcal carrier on the surveyed day. Pneumococcal infection risk and contact behaviour were highly correlated: If adjusted for age and locality, the odds of an infant’s carriage increased by 22% (95% confidence interval (CI): 15 to 29) per 10 percentage points increase in the probability to have had close contact with at least 1 pneumococcal carrier. Moreover, 2- to 6-year-old children contributed 51% (95% CI: 39 to 63) to the total direct pneumococcal exposure risks to infants in this setting. The main limitation of this study is that exposure risk was assessed indirectly by the age-dependent propensity for carriage of a contact and not by assessing carriage of such contacts directly.ConclusionsIn this study, we observed that cross-sectional contact and infection studies could help identify pneumococcal transmission routes and that preschool-age children may be the largest reservoir for pneumococcal transmission to infants in Nha Trang, Vietnam.  相似文献   

18.
This study is to distinguish the objective and subjective measures of atmospheric visibility, and investigate the relationship between the two measures as well as the effect on the people’s behavioral intentions on air pollution in China. A mixed method was adopted in this study combining both lab experiments to measure objective atmospheric visibility and a questionnaire survey to measure subjective atmospheric visibility. The regression results show that: (a) The people’s perception of atmospheric visibility is based on objective information about the ambient air (Relative Humidity, PM2.5, Atmospheric Visibility) and there are some turning points that could enable people to distinguish good and poor air quality; (b) The people’s perception of visibility has a significant effect on either their willingness-to-accept (WTA) the visibility or on their willingness-to-pay (WTP) for improving the air quality; (c) The subjective atmospheric visibility also mediates the effect of objective measures on WTA or WTP; (d) The higher the level of pro-environmental attitude is, the more people will pay to improve the air quality, and this effect is much stronger than that effect of perception; and (e) The respondents from North China Plain, Yangtze River Delta and the relative clean areas have higher level of perception.  相似文献   

19.
Tropical rainforests are characterized by having high structural complexity, stratification, and species diversity. In Colombia, tropical rainforests are critically endangered with only 24% of their area remaining. Forest fragments are often valued based on the presence of vertebrate taxa despite that small habitat remnants may still harbor diverse invertebrate communities. We surveyed the ant fauna associated with rainforest fragments and their surrounding landscape elements (including mature forests, flooded forests, gallery forests, live fences, and pastures) in the Magdalena River watershed. Pitfall traps and litter samples were used to estimate ant richness and diversity, and to compare ant composition among landscape elements. We found 135 species from 42 genera, representing 16% of the species and 43% of the genera known for Colombia. Our surveys also uncovered 11 new ant records for the Colombian inter-Andean region and 2 new records for the country of Colombia: Mycocepurus curvispinosus (Mackay) and Rhopalothrix isthmica (Weber). The highest species richness was found in forest-covered sites, and richness and diversity was lower in the disturbed landscapes surrounding the forest patches. Species composition varied significantly between all habitat types, but was most similar between forest types suggesting that a loss of structural complexity has the greatest effect on ant communities. Across our study sites, ten species showed the greatest response to habitat type and could qualify as indicator taxa for this region. We conclude by discussing the value of conserving even small forests in this landscape due to their ability to retain high diversity of ants.  相似文献   

20.
We studied five populations of a rainforest understory insectivorous bird (Myrmeciza exsul, chestnut-backed antbird) in a fragmented landscape in northeastern Costa Rica in order to test hypotheses about the influence of forest fragmentation on population genetic structure using 16 microsatellite loci. Bayesian assignment approaches—perhaps the most conservative analyses we performed—consistently grouped the sites into two distinct groups, with all individuals from the smallest and most isolated population clustering separately from the other four sites. Additional analyses revealed (1) overall significant genetic structure; (2) a pattern of population differentiation consistent with a hypothesis of isolation by resistance (landscape connectivity), but not distance; and (3) relatively short dispersal distances indicated by elevated mean pairwise relatedness in several of the sites. Our results are somewhat surprising given the small geographic distances between sites (11–34?km) and the short time (~60?years) since wide-spread deforestation in this landscape. We suspect fine-scale genetic structure may occur in many resident tropical bird species, and in the case of the chestnut-backed antbird it appears that anthropogenic habitat fragmentation has important population genetic implications. It appears that chestnut-backed antbirds may persist in fragmented landscapes in the absence of significant migration among patches, but mechanisms that allow this species to persist when many other similar species do not are not well understood.  相似文献   

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