Discosorids and Oncocerids (Cephalopoda) of the Middle Ordovician Kunda and Aseri Regional Stages of Baltoscandia and the early evolution of these groups

Discosorid and oncocerid cephalopods of the Kunda and Aseri Regional Stage (Darriwilian, Middle Ordovician) from Öland Island, Sweden and North Estonia are described for the first time. We demonstrate that a high generic and specific diversity of Oncocerida was already established in the earliest Darriwilian. The new oncocerid species Neumatoceras borense nov. sp., N. breviborense nov. sp., Paramiamoceras breviventrum nov. sp., Richardsonoceras gastroscopium nov. sp., R. gerhardi nov. sp., R. goldmanni nov. sp., R. haelluddenense nov. sp., Richardsonoceroides kingi nov. sp., R. oelandense nov. sp., and R. rhytium nov. sp. are erected; Richardsonoceroides schiefferdeckeri (Dewitz) is revised. The new graciloceratid Kundoceras evansi nov. gen., nov. sp. is erected. A review of records of early oncocerids from China shows that Richardsonoceras Foerste is probably the most primitive oncocerid and supports the hypothesis that oncocerids evolved in the early Floian or latest Tremadocian from a Bassleroceras Ulrich and Foerste-like ancestor. The new discosorid genus Paldoceras nov. gen. and species Paldoceras paldiskense nov. sp. and P. neptunsakerense nov. sp. are erected. These discosorids record the morphological link between the late Darriwilian Ruedemannoceras Flower and the early Floian Apocrinoceras Teichert and Glenister, which is considered to be the earliest discosorid.     

Phylogenetic relationships of Early–Middle Ordovician ostracods of Baltoscandia

Phylogenetic analysis of the Early and early Middle Ordovician (Tremadoc and Arenig) ostracod species of Baltoscandia suggests a polyphyletic origin for the suborder Beyrichiocopa. Binodicopes, leiocopes and eridostracans are excluded from the beyrichiocopide clade. An independent origin from the basal ostracods is suggested for the binodicopes and eridostracans. The palaeocopes form a strongly supported monophyletic clade. Within this suborder, the ctenonotellid and the tetradellid families together form a monophyletic clade. The tetradellids are paraphyletic, being a stem-group for the ctenonotellids. Nanopsis nanella , the earliest known ostracod from the Tremadoc, is a basal palaeocope. The early eridostracans Conchoprimitia and Incisua , with their uncomplicated carapace morphology, might be the most primitive ostracods.     

Biodiversity curves for the Ordovician of Baltoscandia

Biodiversity curves for the Ordovician of Baltoscandia show a substantial increase in taxonomical diversity through the period, as seen also in global data sets. A database of 10,340 records of first and last appearances of species at different localities in the region has been analysed using simple species counts, and partly validated with resampling methods. While the biodiversity curve for all fossil groups combined is probably reasonably accurate except for an unknown scaling constant, taxonomical or geographical subsets may not be sufficiently well sampled to allow precise measurement of their species counts through time. The analysis shows a major diversification event commencing in the middle Arenig (Ibex-Whiterock boundary), and more limited diversification events in the Llanvirn, Caradoc and Ashgill. The Scandinavian (Norwegian and Swedish) biodiversity curves are broadly correlated with major changes in sea level, with low biodiversity at highstands and high biodiversity at lowstands, although this pattern is not clear for all fossil groups. In the Arenig, graptolites and trilobites appear to have higher diversities at high sea levels, while the brachiopods and ostracodes show higher diversities at low sea level. As a consequence, the Arenig diversification is delayed for the latter two groups until the upper end of the interval.     

AnOistodus venustus-like conodont species from the Middle Ordovician of Baltoscandia

Ordovician conodont specimens resemblingOistodus venustus Stauffer, 1935 have been reported from many areas. There is increasing evidence, however, that several lineages with homeomorphic conodont elements have erroneously been referred to one and the same species. I have investigated Baltoscandian conodont elements of this kind in order to find out about their origins and phylogenetic relationships with morphologically comparable elements from other areas. A natural grouping of finds from the Middle and lower Upper Ordovician of Baltoscandia is here described as belonging to a new species of a new genus,Venoistodus balticus n. gen., n. sp. The new species probably evolved paedomorphically fromDrepanoistodus forceps (Lindström, 1955) in the Early Ordovician.     

Lower–Middle Ordovician carbon and oxygen isotope chemostratigraphy at Hällekis,Sweden: implications for regional to global correlation and palaeoenvironmental development

A high‐resolution chemostratigraphical (coupled δ¹³C_carb and δ¹⁸O_carb) study of the topmost Floian through the middle Darriwilian (Ordovician) succession at the Hällekis quarry, Kinnekulle, southern Sweden, shows relatively steady isotopic values with overall minor changes, although some notable short‐ and long‐term shifts are discernible. A pronounced positive shift in δ¹³C in the uppermost part of the study succession is identified as the Middle Darriwilian Isotopic Carbon Excursion (MDICE), representing the only named global isotopic excursion in the data set. Regional and global comparisons suggest that few details in the different carbon and oxygen isotope curves can be confidently correlated, but longer‐term patterns appear quite consistent. Trends in the isotope data are in agreement with palaeogeographical reconstructions. Differences in stratigraphical patterns of both carbon and oxygen isotopes between localities suggest strong secular development at several spatiotemporal scales; any global signal involving relatively minor isotopic shifts is often masked/subdued by local and regional overprinting and care should be taken not to overinterpret data sets. Collectively, the data suggest rising sea levels and cooling climates through the studied time interval, but detailed interpretations remain problematic.     

Post-eocene biofacies,palaeoenvironments and palaeogeography of the Bengal Basin,India

The Bengal Basin is known for the extensive development of a thick Cretaceous— Tertiary sedimentary sequence in the eastern part of India. The basin has undergone several phases of transgressions, regressions, periodic uplifts and localised negative movements throughout the period of its evolution. The sedimentation up to the end of the Eocene was largely under the influence of a major transgressive phase which was later replaced by a regressive phase on account of the uplift and resulting marine retreat. in this paper, an analysis of the microfaunal distribution, biofacies and sedimentary and tectonic history is made for reconstruction of the palaeoenvironmental conditions and palaeogeography of the Bengal Basin relating to the post-Eocene regressive phase of evolution.During the Oligocene—Early Miocene, the open marine conditions existing since the Eocene were progressively modified on account of the regression into more brackish, lagoonal and estuarine types. A typical prograding delta started to spread over a large part of the marginal area of the basin. The rocks of the Barail Group, formed under the transitional environments of the delta, are found to occur in almost all the major geo-provinces of the basin. The sedimentary environments and characteristics of the rocks were ultimately controlled by the configurations of the respective geo-provinces. The negative movements in the Miocene along certain marginal areas were associated with the marine transgressive phase giving rise to the Surma Group. This transgressive phase was, however, short lived and its impact was not equally felt in all areas. The northeastern region was still uplifted which favoured an almost continuous existence of the deltaic phase.By the end of Miocene a greater part of the basin underwent a strong tectonic upheaval which was possibly the precursor of the main Himalayan orogeny. The intermontane depressions formed in the uplifted areas were the depositional sites for the Tipam Group and younger beds in Plio-Pleistocene times. The rapidly eroded debris from the highlands spread over a wide area towards the south under the influence of the river system of the Ganga and Brahmaputra which has transformed the original basinal areas into a large modern delta complex.     

Early growth-stages and classification of orthoceridan Cephalopods of the Darriwillian (Middle Ordovician) of Baltoscandia

Five apices of orthoceridan cephalopods from the early Middle Ordovician Holen Limestone of Öland, Sweden that where collected in the late 19th Century by G. Holm provide information on cephalopod evolution in the early Palaeozoic. The apices belong to specimens of the genus Hedstroemoceras Foerste, 1930 and Archigeisonoceras Chen, 1984. The apices are small in comparison with apices of other cephalopods of the Ordovician; the initial chambers of the shells of both genera are hemispherical and approximately 1 mm and 1.5 mm in cross-section diameter, respectively. The apical 2–3 mm of the shell are free from growth-lines and possess no cicatrix, though distinct longitudinal wrinkles are present. There is a slight variability of siphuncle position during early growth in Archigeisonoceras. It can be shown that the structure of the connecting ring of Hedstroemoceras is similar to that of other Orthocerida. Additionally, the hemispherical apex of Lituites perfectus Wahlenberg, 1821 gives evidence for the orthoceridan affinity of lituitidans. The investigation shows that early Middle Ordovician Orthocerida display a characteristic connecting ring structure, a characteristic apex morphology and variable siphuncular positions that differs significantly from other cephalopods of the Ordovician. Based on this evidence it is concluded that a small spherical apex is an autapomorphy of the Orthocerida. Moreover, this evidence supports a splitting of the order Orthocerida in two taxa of different affinities. The Orthocerida sensu stricto comprises orthocones with a tubular siphuncle nearly without endospiphuncular deposits, and a spherical apex. Embryonic shell, orthoceridan ancestry, orthoceridan classification.     

Baltoscandian conodont biofacies fluctuations and their link to Middle Ordovician (Darriwilian) global cooling

The Middle Ordovician conodont genera that are suitable for palaeoenvironmental interpretations from the epicontinental Baltoscandian platform have been identified and evaluated to establish and describe conodont biofacies and their relationship to global cooling. The construction of biofacies was based on multivariate statistical analyses of more than 375 700 conodont specimens from 520 samples and 21 localities across Baltica. Three distinct, recurrent and laterally extensive conodont biofacies existed across the Baltoscandian platform of the Baltica continent during the Dapingian and early to middle Darriwilian stages (Middle Ordovician). A relatively shallow water conodont assemblage named the Baltoniodus–Microzarkodina Biofacies characterized the inner shelf localities in central Sweden, Estonia, Russia and Ukraine. In the distal shelf areas, patterns are more complex. Here, genera of the Periodon Biofacies characterized the shelf margin areas of the Scandinavian Caledonides facing the relatively warm Iapetus Ocean towards the north, whereas the Protopanderodus Biofacies dominated the distal shelf areas facing the cooler Tornquist Sea towards the south‐west. Although these three main biofacies continued to dominate during the succeeding Darriwilian stage, distinct changes in the distribution of biofacies took place during the transition from the Dapingian Stage to the Darriwilian. We argue that the biofacies change was triggered by a regressive event related to early Darriwilian cooling, and that the palaeoclimatological changes influenced the Baltic conodont faunas near the Tornquist Sea margin before those of the Iapetus margin (early vs middle Darriwilian).     

The first instar larva of two species of Miltogramminae (Diptera: Sarcophagidae) from the Middle East – examples of peculiar morphology

The first instar larva is described for two species of Miltogramminae flesh flies representing the genera Miltogramma Meigen and Phrosinella Robineau‐Desvoidy. Using a combination of light microscopy and scanning electron microscopy, the habitus is documented along with all important exoskeletal and cephaloskeletal structures. The described first instar larvae show substantial modifications of their morphology in comparison with the saprophagous ground plan defined for calyptrate flies. Miltogramma (Miltogrammidium) efflatouni Rohdendorf possesses the general set of derived character states shared with other species of Miltogramma and shares larval synapomorphies with species representing the subgenera Anacanthothecum Rohdendorf, Cylindrothecum Rohdendorf and Miltogrammidium Rohdendorf. Unique character states of the first instar larva of this species are the spine‐like shape of antennal complex, laterally compressed apical part of mouthhooks and an extreme elongation of the sensilla of the maxillary palpus. Phrosinella (Asiometopa) ujgura (Rohdendorf) possesses a pair of retractable, robust processes on the ventral margin of the first thoracic segment and a very strong, elongated labrum. Both character states are present in other known first instar larvae of genus Phrosinella. A reduction of cuticular ridges on dorsal and lateral surfaces of abdominal segments supports a monophylum consisting of the subgenera Asiometopa Rohdendorf and Caspiomyia Rohdendorf within genus Phrosinella.     

First report of craniide brachiopods in the Palaeozoic of Iran (Pseudocrania,Ordovician), and Early to Mid‐Ordovician biogeography of the Craniida

Abstract: Lower Ordovician faunas of Bohemia (Perunica), Baltica and North China include the oldest known representatives of the Order Craniida, but otherwise in Gondwana and associated terranes, the record of craniides is sparse. Pseudocrania insperata sp. nov. from the Lashkarak Formation of the Eastern Alborz Mountains is the first and as yet only record of the occurrence of craniides in the Middle Ordovician (Darriwilian) of Iran and temperate to high latitude peri‐Gondwana. Pseudocrania was known hitherto only from the Middle Ordovician of Baltoscandia and the Chu‐Ili terrane of Kazakhstan.     

Nematodes associated with Ips cembrae (Coleoptera: Curculionidae): comparison of generations,sexes and sampling methods

A study of nematodes associated with the large larch bark beetle Ips cembrae (Heer 1836) was carried out at three locations in the Czech Republic. The proportion of beetles infested by endoparasitic nematodes (representatives of genera Contortylenchus, Parasitylenchus, Cryptaphelenchus and Parasitorhabditis) ranged from 29.9 to 50.9%. Significant differences were determined in nematode infestation levels among locations, generations and sampling methods. No differences were found in infestation rates between males and females. The percentage of bark beetles with phoretic nematodes ranged from 18 to 42.9%. Phoretic nematodes directly found under elytra, on wings and between body segments of the bark beetles belong to the genus Micoletzkya. However, adults and juveniles of other two phoretic species Laimaphelenchus penardi and Bursaphelenchus sp. were found in the gallery frass of I. cembrae. Infestation by phoretic nematodes positively correlated with the presence of mites under elytra.     

Mitochondrial DNA analysis of medieval sheep (Ovis aries) in central Italy reveals the predominance of haplogroup B already in the Middle Ages

We retrieved 34 medieval ovicaprine remains, from three archaeological sites of central Italy dating to about 1000 years old, and analyzed them using mitochondrial DNA. We compared the reconstructed haplogroups with modern sheep samples from Europe and the Middle East and sequences from the literature. In modern sheep, haplogroup HA is present in countries with access to the Mediterranean and close to the domestication center, whereas it is very rare or absent in the rest of Europe. The haplogroup HB was predominant in ancient samples (90%), whereas haplogroup HA was found at 10%. Ancient haplogroups match the present distribution in modern sheep in Italy, indicating that the current proportion of HA/HB was already established in the Middle Ages and is not the result of subsequent events such as selective breeding practices.     

Concordance of bacterial communities of two tick species and blood of their shared rodent host

High‐throughput sequencing is revealing that most macro‐organisms house diverse microbial communities. Of particular interest are disease vectors whose microbiome could potentially affect pathogen transmission and vector competence. We investigated bacterial community composition and diversity of the ticks Dermacentor variabilis (n = 68) and Ixodes scapularis (n = 15) and blood of their shared rodent host, Peromyscus leucopus (n = 45) to quantify bacterial diversity and concordance. The 16S rRNA gene was amplified from genomic DNA from field‐collected tick and rodent blood samples, and 454 pyrosequencing was used to elucidate their bacterial communities. After quality control, over 300 000 sequences were obtained and classified into 118 operational taxonomic units (OTUs, clustered at 97% similarity). Analysis of rarefied communities revealed that the most abundant OTUs were tick species‐specific endosymbionts, Francisella and Rickettsia, and the commonly flea‐associated bacterium Bartonella in rodent blood. An Arsenophonus and additional Francisella endosymbiont were also present in D. variabilis samples. Rickettsia was found in both tick species but not in rodent blood, suggesting that it is not transmitted during feeding. Bartonella was present in larvae and nymphs of both tick species, even those scored as unengorged. Relatively, few OTUs (e.g. Bartonella, Lactobacillus) were found in all sample types. Overall, bacterial communities from each sample type were significantly different and highly structured, independent of their dominant OTUs. Our results point to complex microbial assemblages inhabiting ticks and host blood including infectious agents, tick‐specific endosymbionts and environmental bacteria that could potentially affect arthropod‐vectored disease dynamics.     

Ichnodiversity and ichnodisparity: significance and caveats

Ichnodiversity has been used as a proxy for environmental stress and stability in facies interpretations and to reconstruct evolutionary radiations and colonization histories in evolutionary palaeoecology. The three components of global diversity are exported from ecology and adapted for ichnology. Alpha ichnodiversity is used for palaeoenvironmental characterization, being assessed for individual facies. Beta ichnodiversity is commonly overlooked, although it may provide information about degree of similarity between ichnofaunas formed along environmental gradients. Gamma ichnodiversity may provide clues to detect ichnofossil provincialism. The concept of disparity may also prove to be significant in ichnological studies. Whereas ichnodiversity refers to ichnotaxonomic richness, ichnodisparity provides a measure of the variability of morphological plans in biogenic structures. Changes in global ichnodiversity do not necessarily parallel changes in ichnodisparity. For example, while the Cambrian explosion involved a dramatic increase in both, the Ordovician radiation essentially reflects an increase only in the former. Ichnodiversity and ichnodisparity should be used with caution because they are both affected by taphonomic processes. High diversity of superficial to shallow‐tier trace fossils may result from enhanced preservation due a poorly developed mixed layer, rather than a true reflection of ecosystem performance, as shown by underexploited infaunal ecospace after biotic crises (e.g. end‐Permian mass extinction).     

Validation of a cheap and simple nondestructive method for obtaining AFLPs and DNA sequences (mitochondrial and nuclear) in amphibians

The use of nondestructive methods for obtaining DNA from amphibians (e.g. buccal swabs) allows genetic studies to be performed without affecting the survival of the studied individuals. In this study, we compared two methods of nondestructive DNA sampling, buccal swabs and interdigital membrane or toe‐clipping, in several amphibian species of different size: Rhinella spinulosa, R. atacamensis, six species of the genus Telmatobius and Pleurodema thaul. We evaluated the integrity of the DNA extracted by sequencing fragments of mitochondrial and nuclear genes and by generating amplified fragment length polymorphisms markers (AFLPs). In all cases, we obtained an adequate amount of DNA (mean range 55–298 ng/μL). We obtained identical DNA sequences from buccal swab and interdigital membrane/toe‐clip for all individuals. The differences in the coding of AFLP markers between the tissues were similar to those reported for replicas of the same type of sample in similar analyses in other species of amphibians. In conclusion, the use of buccal swabs is a trustworthy and inexpensive method to obtain DNA for mitochondrial and nuclear sequencing and AFLP analyses. Given the types of markers evaluated, buccal swabs may be used for phylogenetic, phylogeographic and population genetic studies, even in small amphibians (<33 mm).     

Phylogenetic inference and peristome evolution in haplolepideous mosses,focusing on Pseudoditrichaceae and Ditrichaceae s. l.

Pseudoditrichum mirabile, the only species of Pseudoditrichaceae, has been known for a long time from a single collection from the Canadian Arctic. Its systematic position remained enigmatic due to similarity in gametophyte structure with Ditrichaceae, a family that has simple peristomes, whereas the peristome in Pseudoditrichum is double. Due to this difference, Pseudoditrichum was classified in either Funariales or Bryales. A recent discovery of this species in the Anabar Plateau in northern Siberia has allowed its phylogenetic position to be tested based on plastid rps4 and rbcL and mitochondrial nad5 sequences. The results of this research reject the earlier hypotheses. Instead, the molecular analysis resolves Pseudoditrichum in a clade with Chrysoblastella chilensis (formerly Ditrichaceae) in the haplolepideous lineage. The peristome of Pseudoditrichum is of a previously unknown type with a fully developed exostome and hyaline endostome elements opposite the exostome teeth, based not on the 4:2:4 peristomial formula, but on 4:2:3. Double peristomes of the same type, albeit rather strongly reduced, occur in Catoscopium, Chrysoblastella, Distichium and Ditrichum flexicaule. The polyphyly of Ditrichaceae is confirmed by molecular phylogenetic analysis, and Ditrichum flexicaule and D. gracile are segregated into the new genus Flexitrichum and family Flexitrichaceae. An independent status of the recently resurrected family Distichiaceae is supported, and segregation of Chrysoblastella and Saelania into new monospecific families is proposed.     

Efficacy of Acibenzolar‐S‐Methyl and β‐Aminobutyric Acid for Control of Downy Mildew in Greenhouse Grown Basil and Peroxidase Activity in Response to Treatment with these Compounds

Downy mildew, caused by the oomycete pathogen Peronospora belbahrii, is a devastating foliar disease of basil in the United States and worldwide. Currently there are very few chemistries or organic choices registered to control this disease. In this study, two systemic acquired resistance (SAR) inducers, acibenzolar‐S‐methyl (ASM) and β‐aminobutyric acid (BABA), were evaluated for their in vitro effects on the pathogen, for their potential to control basil downy mildew in greenhouses, and for changes in peroxidase activity in basil plants treated with these two SAR inducers. No significant inhibition of sporangial germination was detected in water agar amended with ASM at concentrations lower than 100 mg/l or with BABA at concentrations lower than 500 mg/l. Efficacy of ASM and BABA in greenhouses varied depending on the rate, method and timing of application. The area under the disease progress curve (AUDPC) of disease severity was significantly reduced compared to the non‐treated control when ASM was sprayed (in all experiments) or drenched (in one out of two experiments) pre‐, or pre‐ + post‐inoculation at rates of 25–400 mg/l. Three weekly post‐inoculation sprays of ASM at the rate of 50 mg/l reduced AUDPC by 93.0 and 47.2% when started 3 and 7 days after inoculation (DAI), respectively. The AUDPC of disease severity was also significantly reduced when BABA was sprayed pre‐ + post‐inoculation at rates of 125–500 mg/l. According to the prediction using a log‐logistic function, 50% maximum disease protection was achieved at a concentration of 27.5 mg/l of ASM. Basil plants treated with these two SAR inducers and challenged with the pathogen showed significantly higher peroxidase activity than the non‐treated control at 8 DAI. Temporally, the highest activity of peroxidase was detected at 8 DAI, decreased at 15 DAI and waned further at 23 DAI.