When is a parasite species a species?

Regrettably, 140 years after the publication of Darwin's Origin of Species, we face the grotesque situation that we still do not know what is a species whose origin Darwin wanted to explain. A generally applicable species definition is not available. Is there a basic unit of biodiversity above the level of individuals? Do we try to define something that does not exist in reality? The strong potential for the evolution of genetic variability in parasites together with the importance of species diagnosis for applied fields of parasite research make biodiversity research a key role in parasitology. Frequent occurrence of sympatric speciation, clonal reproduction, selfing, sib mating or parthenogenesis imply exceptional conditions for the evolution of gene pool diversities in parasites.     

榕属（Ficus）果实统一名称的探讨

多年来,榕属的果实名称一直没有统一,给植物学的教学和科研带来了一定的不便,因此统一榕属果实的名称很有必要。论文综合了国内比较有权威的教材和专著的观点,并进行了认真的分析和探讨,提出了建议：1）隐头花序命名“榕果”,是比较合理的。2）名称和榕属的“榕”字紧密的结合在一起,易于接受。3）在以后的植物学教材中,能增补或修定如下内容：榕果：桑科榕属植物一种特殊类型的聚花果。花序轴特别肥大而呈凹陷状,很多小瘦果着生在凹陷的内壁上．仅顶部有一小孔与外界相通。     

How do species interactions affect species distribution models?

One of the most promising recent advances in biogeography has been the increased interest and understanding of species distribution models – estimates of the probability that a species is present given environmental data. Unfortunately, such analyses ignore many aspects of ecology, and so are difficult to interpret. In particular, we know that species interactions have a profound influence on distributions, but it is not usually possible to incorporate this knowledge into species distribution models. What is needed is a rigorous understanding of how unmeasured biotic interactions affect the inferences generated by species distribution models. To fill this gap, we develop a general mathematical approach that uses probability theory to determine how unmeasured biotic interactions affect inferences from species distribution models. Using this approach, we reanalyze one of the most important classes of mechanistic models of competition: models of consumer resource dynamics. We determine how measurements of one aspect of the environment – a single environmental variable – can be used to estimate the probability that an environment is suitable with species distribution models. We show that species distribution models, which ignore numerous facets of consumer resource dynamics such as the presence of a competitor or the dynamics of depletable resources, can furnish useful predictions for the probability that an environment is suitable in some circumstances. These results provide a rigorous link between complex mechanistic models of species interactions and species distribution models. In so doing they demonstrate that unmeasured biotic interactions can have strong and counterintuitive consequences on species distribution models.     

薜荔（Ficus pumila L.）传粉的代价

种间关系中一方以自身生长过程中的一部分物质和能量为对方所利用的现象便是一个物种为对方付出的代价。在中性的种间关系中,两个物种彼此不受影响,无所谓代价;在偏性的种间关系中,受害者付出无谓的代价,受益者得到无偿的利益（如寄主与寄生物、被捕食者与捕食者之间...     

Has Pollination Mode Shaped the Evolution of Ficus Pollen?

Background

The extent to which co-evolutionary processes shape morphological traits is one of the most fascinating topics in evolutionary biology. Both passive and active pollination modes coexist in the fig tree (Ficus, Moraceae) and fig wasp (Agaonidae, Hymenoptera) mutualism. This classic obligate relationship that is about 75 million years old provides an ideal system to consider the role of pollination mode shifts on pollen evolution.

Methods and Main Findings

Twenty-five fig species, which cover all six Ficus subgenera, and are native to the Xishuangbanna region of southwest China, were used to investigate pollen morphology with scanning electron microscope (SEM). Pollination mode was identified by the Anther/Ovule ratio in each species. Phylogenetic free regression and a correlated evolution test between binary traits were conducted based on a strong phylogenetic tree. Seventeen of the 25 fig species were actively pollinated and eight species were passively pollinated. Three pollen shape types and three kinds of exine ornamentation were recognized among these species. Pollen grains with ellipsoid shape and rugulate ornamentation were dominant. Ellipsoid pollen occurred in all 17 species of actively pollinated figs, while for the passively pollinated species, two obtuse end shapes were identified: cylinder and sphere shapes were identified in six of the eight species. All passively pollinated figs presented rugulate ornamentation, while for actively pollinated species, the smoother types - psilate and granulate-rugulate ornamentations - accounted for just five and two among the 17 species, respectively. The relationship between pollen shape and pollination mode was shown by both the phylogenetic free regression and the correlated evolution tests.

Conclusions

Three pollen shape and ornamentation types were found in Ficus, which show characteristics related to passive or active pollination mode. Thus, the pollen shape is very likely shaped by pollination mode in this unique obligate mutualism.     

钝叶榕(Ficus curtipes)非传粉小蜂交配行为

榕树及其传粉榕小蜂繁殖上相互依存,被认为是生物界中协同进化时间最悠久,相互关系最密切的一对生物;在大多数榕树种类的隐头花序内,除了传粉榕小蜂外,还共存着多种非传粉小蜂,它们的繁殖行为直接影响着榕树和传粉榕小蜂的繁殖和互惠稳定.钝叶榕(Ficus curtipes Corner),是一种雌雄同株的绞杀性榕树.研究在西双版纳热带植物园里共收集钝叶榕100个隐头果内的榕小蜂,获得9493号标本;其中,包括1种传粉小蜂和5种非传粉小蜂,钝叶榕传粉小蜂Eupristina sp.占总数的44.66%,杨氏榕树金小蜂Diaziella yangi 占46.13%,而其它4种非传粉小蜂(Lipothymus sp., Sycobia sp., Philotrypesis sp.和Sycoscopter sp.)仅占9.20%.前3种榕小蜂雌蜂进到果腔产卵,其余3种在果外产卵.观测23个钝叶榕榕果出蜂情况发现,6种榕小蜂在钝叶榕隐头花序内遵循严格的羽化出蜂顺序,首先是Sycobia sp.,次之是Lipothymus sp.,再次之是杨氏榕树金小蜂,最后是钝叶榕传粉小蜂、Philotrypesis sp.和Sycoscopter sp..5种非传粉小蜂的交配场所与雄蜂翅型无关,雄蜂有翅型的杨氏榕树金小蜂大部分交配在果内完成,而且它们的雄蜂为争夺交配机会存在激烈的打斗行为;雄蜂无翅型的Lipothymus sp.有部分雄蜂爬出隐头果,在果壁和附近的叶片背面交配;雄蜂有翅型的Sycobia sp.,其所有交配都发生在果外;Philotrypesis sp.和Sycoscopter sp. 雄蜂均无翅,它们的交配全发生在果内.局域配偶竞争使榕小蜂性比偏雌,杨氏榕树金小蜂雄蜂虽然有翅,但大部分交配发生在榕果内,这将影响其最佳的性比率.因此,依赖雄蜂翅型并不能很好地预测榕小蜂的交配场所和性比率.     

Are hybrid species more fit than ancestral parent species in the current hybrid species habitats?

Hybrid speciation is thought to be facilitated by escape of early generation hybrids into new habitats, subsequent environmental selection and adaptation. Here, we ask whether two homoploid hybrid plant species (Helianthus anomalus, H. deserticola) diverged sufficiently from their ancestral parent species (H. annuus, H. petiolaris) during hybrid speciation so that they are more fit than the parent species in hybrid species habitats. Hybrid and parental species were reciprocally transplanted into hybrid and parental habitats. Helianthus anomalus was more fit than parental species in the H. anomalus actively moving desert dune habitat. The abilities to tolerate burial and excavation and to obtain nutrients appear to be important for success in the H. anomalus habitat. In contrast, H. deserticola failed to outperform the parental species in the H. deserticola stabilized desert dune habitat, and several possible explanations are discussed. The home site advantage of H. anomalus is consistent with environmental selection having been a mechanism for adaptive divergence and hybrid speciation and supports the use of H. anomalus as a valuable system for further assessment of environmental selection and adaptive traits.     

The relative of species pools in determining plant species richness: an alternative explanation of species coexistence?

Explanations of the pattern of species have traditionally relied on small-scale, local processes occurring in ecological time. Differences in species richness have associated with different mechanisms avoiding competition, such as spatiotemporal heterogeneity (weaker competitors may find a more favourable place or time) or environmental stress (competition is assumed to be less intensive under difficult conditions). More recently, large-scale process have been taken into account, raising such questions as: which plant species may potentially grow in a certain community? Are evolutionary processes and species dispersal responsible for the differences between communities? The species-pool theory attempts to answer these general questions, and information about species pools is needed for the design of experiments where the number of species in a community is manipulated.     

Do artificial substrates favor nonindigenous fouling species over native species?

Exotic species are prominent constituents of fouling communities. If exotic fouling organisms colonize or compete better on a wider range of substrate types than native species, this may partially account for their high abundance in estuaries and bays. We used four artificial and four naturally occurring substrate types to compare initial settlement and percent cover of native and exotic fouling species through six months of community development. Both the identity of common taxa and the total number of species colonizing artificial versus natural substrate types were similar. Despite the similarities in species richness, relative abundance patterns between natural and artificial substrate types varied, particularly as the communities developed. Native species were initially in equal abundance on natural and artificial substrate types. Initially, the two most common exotic species, the colonial tunicates, Botrylloides violaceus Ritter and Forsyth and Botryllus schlosseri (Pallas), were also in similar, but low, abundance on artificial and natural substrates. As the communities developed, there was little change in abundance of exotic or native species on natural substrates. However, on artificial substrates the exotic tunicates increased dramatically and native species declined in abundance. Artificial surfaces may provide a novel context for competitive interactions giving exotic species a more “level playing field” in an environment for which they otherwise might not be as well adapted compared to long-resident native species. Additions of artificial substrates to nearshore environments may disproportionately favor exotic species by increasing local sources of exotic propagules to colonize all types of substrates.     

β-D-galactosidase ofLactobacillus species

The activity of β-D-galactosidase was studied in 13 strains of lactobacilli (groupsStreptobacterium, Thermobacterium andBetabacterium). Using 2-nitrophenyl galactopyranoside as substrate, the enzyme activity varied with the strain. The values found in theThermobacterium group were superior to those in theStreptobacterium group. The optimum pH for the species belonging to theThermobacterium group was uniform, in contrast to the ph for those from theStreptobacterium which varied according to the species. The optimum temperature was quite uniform within each group and higher in theStreptobacterium. Lactose acted as a competitive inhibitor. MgCl₂ protected the enzyme from thermal denaturation. The calcium ions inhibited the activity in all cases. The behaviour of the protectors of the SH groups varied according to the strain. 6-Phospho-β-D-galactosidase activity was also determined, levels lower than β-D-galactosidase were found, except inLactobacillus plantarum ATCC 8014 and 14917.     

爱玉子（Ficus awkeotsang）不同品系的繁殖生态学比较

对不同品系爱玉子（Ficus awkeotsang）的繁殖系统进行了研究。推算表明：爱玉子栽培的雌、雄株数量配植比例可以从目前的4～5：1提高到23—24：1,以使传粉小蜂种群达到合理密度,提高结实率和成虫瘿率,增加单位面积雌株的栽培数量,提高爱玉子单位面积产量,增加土地栽培效益。比较爱玉子不同品系雌、雄花序的B期（雌花期）与雄花序的D期（雄花期）花序数量变化及持续时间,结果表明：栽培爱玉子雄花序D期时长约1个月,而雌、雄花序的B期时长却是2～3个月,B、D期不能完全重叠,导致B期花序因没有小蜂传粉（或产卵）而脱落。因此建议对雄株的B期花序进行人工引蜂的方法修复小蜂种群,从而延长雄性品系D期时长;而雌、雄品系配植模式应为1：2～4,即1个雌株品系与2—4个D期依次衔接的雄株品系配植。福建省的爱玉子栽培急需引进和选育D期早熟和晚熟的雄性品系。     

Does climate limit species richness by limiting individual species’ ranges?

Broad-scale geographical variation in species richness is strongly correlated with climate, yet the mechanisms underlying this correlation are still unclear. We test two broad classes of hypotheses to explain this pattern. Bottom-up hypotheses propose that the environment determines individual species’ ranges. Ranges then sum up to yield species richness patterns. Top-down hypotheses propose that the environment limits the number of species that occur in a region, but not which ones. We test these two classes of hypotheses using a natural experiment: seasonal changes in environmental variables and seasonal range shifts of 625 migratory birds in the Americas. We show that richness seasonally tracks the environment. By contrast, individual species’ geographical distributions do not. Rather, species occupy different sets of environmental conditions in two seasons. Our results are inconsistent with extant bottom-up hypotheses. Instead, a top-down mechanism appears to constrain the number of species that can occur in a given region.     

Do species distribution models explain spatial structure within tree species ranges?

Aim To evaluate the ability of species distribution models (SDMs) to predict the spatial structure of tree species within their geographical ranges (how trees are distributed within their ranges). Location Continental Spain. Methods We used an extensive dataset consisting of c. 90,000 plots (1 plot km^?2) where presence/absence data for 23 common Mediterranean and Atlantic tree species had been surveyed. We first generated SDMs relating the presence or absence of each species to a set of 16 environmental predictors, following a stepwise modelling process based on maximum likelihood methods. Superimposing spatial correlograms generated from the predictions of the SDMs over those generated from the raw data allowed a model–observation comparison of the nature, scale and intensity (level of aggregation) of spatial structure with the species ranges. Results SDMs predicted accurately the nature and scale of the spatial structure of trees. However, for most species, the observed intensity of spatial structure (level of aggregation of species in space) was substantially greater than that predicted by the SDMs. On average, the intensity of spatial aggregation was twice that predicted by SDMs. In addition, we also found a negative correlation between intensity of aggregation and species range size. Main conclusions Standard SDM predictions of spatial structure patterns differ among species. SDMs are apparently able to reproduce both the scale and intensity of species spatial structure within their ranges. However, one or more missing processes not included in SDMs results in species being substantially more aggregated in space than can be captured by the SDMs. This result adds to recent calls for a new generation of more biologically realistic SDMs. In particular, future SDMs should incorporate ecological processes that are likely to increase the intensity of spatial aggregation, such as source–sink dynamics, fine‐scale environmental heterogeneity and disequilibrium.     

Invasion-resistance in experimental grassland communities: species richness or species identity?

The question as to why some communities are more invasible than others has pro-found implications for conservation biology and land management. The theoretical issues involved go right to the heart of our understanding of species coexistence and community assembly. The experiment reported here indicates that for productive, small-scale grassland plots, species identity matters more than species richness in determining both the number of invading species and the total biomass of invasives.     

基于CiteSpace的地果（Ficus tikoua）知识图谱分析

目的：分析地果研究领域的现状和发展趋势，为其研究和应用提供参考。方法：以中国知网（CNKI）期刊全文数据库和Web of Science核心数据库为文献来源，基于CiteSpace对地果研究领域的发文量、发文机构、研究作者、关键词和高被引文献进行分析。结果：地果研究相关文献的数量处于波动状态，总量较少，质量还需提升；中国是研究地果的主要国家，且国内研究机构主要位于其自然分布区域内，国际上对地果的关注极少。国内核心作者源于机构内的合作，机构之间协作较少。总黄酮和化学成分等主题是当前地果的研究热点。结论：目前，对地果的研究少、开发利用程度低，未来应加强品种选育以发挥其在园林、药用、食用和生态修复等方面的优良特性，同时应加强对其系统发育和地果-榕小蜂协同进化等研究。     

Are all Mexican odonate species documented? An assessment of species richness

With the aim of protecting Mexican diversity, one current governmental task is to complete national biological inventories. In the case of odonate insects, several researchers have hypothesized that species richness is complete (205 dragonflies and 151 damselflies), but there has not been any formal exercise to test this. Thus, we have investigated whether odonate species richness (for Mexican endemics, dragonflies (suborder Anisoptera), damselflies (suborder Zygoptera) and total species) is complete using sample-based and coverage-based rarefaction curves. Along with this, we also showed how good distribution data are in the country. The rarefaction curves have indicated 100% completeness for all groups suggesting that the inventory is complete. However, species' distribution data is highly patchy regarding areas either well (e.g. central Mexico) or badly (e.g. coast of Guerrero and Oaxaca) collected. We encourage researchers to continue odonate sampling in order to support at least three conservation actions: (i) conservation assessment of endangered species; (ii) knowledge of range shifts given rising global temperatures; and (iii) increase public interest and awareness in protected, touristic areas.