Tubulin from cultured tobacco cells: isolation and identification based on similarities to brain tubulin

The microtubule protein, tubulin, was isolated from most other proteins of cell suspension cultures of Nicotiana tabacum L. by its copolymerization with cow-brain tubulin. Cow-brain tubulin was added to the soluble protein fraction of extract from ³⁵S-labeled tobacco cells and subjected to two cycles of temperature-dependent assembly-disassembly (copolymerization). When analyzed by sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) about 70% of the radioactivity in the twice copolymerized protein was found in a prominent doublet migrating close to the doublet of brain tubulin. When analyzed by two-dimensional isoelectric-focusing-SDS-PAGE the radioactive doublet behaved like the doublet of brain tubulin. Limited proteolysis of the individual polypeptides of the coublets showed that, while the peptide maps of the leading radioactive band and of the β-subunit of brain tubulin were virtually indistinguishable, the maps of the trailing radioactive band and of the α-subunit of brain tubulin, though similar, were not identical. Most of the copolymerized ³⁵S-labeled protein also behaved like brain tubulin during gel filtration and ion-exchange chromatography. It is concluded that the doublet of radioactive polypeptides isolated by copolymerization with brain tubulin are tobacco tubulin polypeptides that have, in their native as well as denatured forms, properties very similar to, but not identical with, cow brain tubulin. Apparently, tubulin has been highly conserved during evolution.     

Thermodynamics of gelation of sickle cell deoxyhemoglobin.

This paper describes the thermodynamic behavior of gels of deoxyhemoglobin S. The solubility of the protein with respect to assembled hemoglobin fibers has been measured using a sedimentation technique. The solubility in 0.15 m-potassium phosphate buffer (pH 7.15) is found to decrease with increasing temperature, attain a minimum value of 0.16 g cm^?3 at 37 °C, and then increase at higher temperatures. The amount of polymer present at various hemoglobin concentrations and temperatures is presented as part of a phase diagram that may be useful for the calibration of other measurement techniques. The effects of varying pH and urea concentration upon the solubility have also been studied.The heat absorption accompanying gelation has been measured by scanning calorimetry. Using sedimentation data on the amount of polymer formed, molar enthalpy changes are obtained. There is a large negative heat capacity change of ? 197 cal deg. mol^?1 and ΔH = 0 near 37 °C. Calorimetric molar enthalpy changes are found to agree with those calculated from the temperature dependence of the solubility by the van't Hoff equation.Our previous two-phase, two-component thermodynamic model of gelation is extended to include the effects of solution non-ideality. A large contribution to the activity of the hemoglobin in the solution phase results from the geometric effect of excluded volume. Incorporating solution phase non-ideality permits the calculation of standard state thermodynamic quantities for the gelation process at 37 °C: ΔG^O ? ?3 k cal mol^?1, ΔH^O ~ 0, ΔS^O ~ 10 cal deg.^?1 mol^?1. The excluded volume effect is also capable of explaining observations of the minimum gelling concentrations of hemoglobin mixtures containing deoxyhemoglobin S without requiring copolymerization of the non-S hemoglobin.     

Correlation between the sequence-length distribution and structure of statistical copolymers of L-valine and γ-benzyl-L-glutamate

Statistical copolymers were prepared from N-carboxyanhydrides of L -valine and γ-benzyl-L -glutamate in dioxan with triethylamine as an initiator. The copolymerization conversion was determined by ir spectroscopy, the copolymer composition by amino acid analysis, and the molecular weights by light scattering. The monomer reactivity ratios were found to be r_Val = 0.14 and r_Glu(OBzl) = 6.4. High-molecular-weight copolymers are formed even at low conversions. The content of β-structure in the copolymers was estimated from the ir spectra in copolymerization mixtures. The sequence-length distribution of L -valine and γ-benzyl-L -glutamate copolymers was calculated and its dependence on copolymerization conversion is discussed. Relations between the sequence-length distribution and the content of β-structure were studied. It was found that the content of β-structure in samples with the same composition is different for low- and high-conversion copolymers. The formation of β-structure in copolymers in the copolymerization mixture requires a certain minimal sequence length, which has been found to be about 6 valine units.     

Graft copolymerization of N-vinylformamide onto sodium carboxymethylcellulose and study of its swelling, metal ion sorption and flocculation behaviour

The present paper reports the graft copolymerization of N-vinylformamide onto sodium carboxymethylcellulose by free radical polymerization using potassium peroxymonosulphate/thiourea redox system in an inert atmosphere. The reaction conditions for maximum grafting have been optimized by varying the reaction variables, including the concentration of N-vinylformamide (12.0 × 10⁻²–28.0 × 10⁻² mol dm⁻³), potassium peroxymonosulphate (4.0 × 10⁻³–12.0 × 10⁻³ mol dm⁻³), thiourea (1.2 × 10⁻³–4.4 × 10⁻³ mol dm⁻³), sulphuric acid (2.0 × 10⁻³–10.0 × 10⁻³ mol dm⁻³), sodium carboxymethylcellulose (0.2–1.8 g dm⁻³) along with time duration (60–180 min) and temperature (25–45° C). Water swelling capacity, metal ion sorption and flocculation studies of synthesized graft copolymer have been performed with respect to the parent polymer. The graft copolymer has been characterized by FTIR spectroscopy and thermogravimetric analysis.     

β-d-Galactosidases immobilized on soluble matrices: Kinetics and stability

Three β-d-galactosidases (β-d-galactoside galactohydrolase, EC 3.2.1.23) from different origins have been immobilized on sucrose-polyacrolein and sucrose sulphate-polyacrolein. This gave enzyme conjugates insoluble in the immobilization medium but which could be made soluble by reduction with sodium borohydride before use. The optimum conditions for both copolymer synthesis and the immobilization reaction were investigated. I.r. and ¹³C n.m.r. spectroscopy were used to follow the sulphation and the copolymerization reaction. The characteristics of the enzyme conjugates were compared with those of the free enzymes: the V_max values of the enzyme conjugates were lower than those of the corresponding free enzymes, whilst the K_m values were similar. The thermal stability of the enzyme conjugates depended on the enzyme origin, while their pH stability was in all cases higher than that of the free enzymes. These data suggest some advantages in using enzyme immobilization supports which can be made soluble after separation of the immobilized enzyme without altering the enzyme characteristics.     

Synthesis, characterization and X-ray structure of [Pd(SO4)(dppp)] · H2O, a catalyst for the CO-ethene copolymerization [dppp = 1,3-bis(diphenylphosphino)propane]

The title complex has been synthesized by first reacting dppp with Pd(AcO)₂ in acetone and then with NaHSO₄ in water. It has been characterized by IR, NMR and X-ray diffraction studies. The ³¹P NMR spectrum in DMSO shows a singlet at 16.62 ppm indicating that the two P atoms are equivalent and that the sulfate anion is weakly coordinating. The X-ray structure shows that the Pd atom is surrounded in an almost regular square planar environment by the two P atoms and by two O atoms of the sulfate anion and that the neutral complex is accompanied by a water molecule of crystallization. The Pd-P distances (2.217(1) and 2.233(1)) and the P-Pd-P angle (90.78(3)°) are close to those found in other complexes where the chelating diphosphine is the same. Also the Pd-O distances and the O-Pd-O bond angle are comparable to those of other relevant chelating ligands.In MeOH, the title complex, in combination with H₂SO₄, catalyses the CO-ethene copolymerization. The productivity reaches a maximum upon increasing the H₂SO₄/Pd ratio up to ca. 470 (7650 g of polyketone/g Pd h at 90 °C and 45 atm, CO/ethene 1/1). The viscosity of the polyketone passes through a maximum of 0.95 dL/g in m-cresol when the above ratio is ca. 100. It has been proposed that acid promotes the copolymerization process by destabilizing the β- and γ-chelates intermediates involved in chain growing process, thus favoring the insertion of the monomers. At relatively high acid concentration the lowering of productivity and viscosity suggests that the sulfate anion competes with the monomers for the coordination to the metal center.In H₂O-CH₃COOH as a solvent the productivity strongly depends on the H₂O/CH₃COOH ratio, as it passes through a maximum of 12 000 g polymer/g Pd h in the presence of ca. 60% of H₂O. The productivity is significantly lower than that found when the acetate and chloride analogues are used (27 000 g polyketone/g Pd · h). Thus, it is likely that the sulfate anion assists significantly the copolymerization process even though the concentration of CH₃COOH/CH₃COO⁻ is much preponderant.     

Gelation of sickle cell hemoglobin in mixtures with normal adult and fetal hemoglobins.

We report the results of thermodynamic and kinetic studies on the gelation of mixtures of sickle cell (S) deoxyhemoglobin with normal human adult (A) and fetal (F) deoxyhemoglobins. The delay time of thermally induced gelation was monitored by the increase in turbidity. At the completion of gelation the solubility was determined by sedimenting the polymers and measuring the supernatant concentration spectrophotometrically. Addition of hemoglobins A or F, at mole fractions from 0 to 0.6, resulted in large increases in both the solubility and the delay time. For a 50:50 mixture of deoxyhemoglobin F with deoxyhemoglobin S, the solubility increased by a factor of 1.8 and the delay time by a factor of 10⁷ relative to pure deoxyhemoglobin S at the same total concentration, while for a 50:50 mixture of deoxyhemoglobins A and S the solubility increased by a factor of 1.4 and the delay time by a factor of 10⁴. The relative delay times were independent of both temperature and total hemoglobin concentration. The data have been analyzed according to theoretical models which treat the effects of temperature, concentration, non-ideality and solution composition on the thermodynamics and kinetics of gelation. The increased solubility in mixtures with deoxyhemoglobin F is fully explained by a model in which only deoxyhemoglobin S molecules polymerize. The effect of fetal hemoglobin (α₂γ₂) and hybrid α₂γβ^S molecules is to increase the solution non-ideality through the contribution of their excluded volume. The smaller increase in the solubility observed in comparable mixtures with deoxyhemoglobin A requires that the hybrid α₂β^Aβ^S molecules copolymerize with the deoxyhemoglobin S. The kinetic results for the mixtures can be quantitatively accounted for using a nucleation model in which the equilibrium properties of the polymer are used to describe the critical nucleus. The very large increases in delay time observed for the $\text{S}\text{F}$ mixtures can be explained by assuming that only α₂β₂^S molecules participate in the formation of a nucleus containing about 25 monomers. As in the thermodynamic analysis, the smaller effect of adding deoxyhemoglobin A can be attributed to the contribution of the hybrid molecules in forming the critical nucleus. Thus the difference between the polymerization properties of mixtures of deoxyhemoglobin S with deoxyhemoglobins A and F can be attributed solely to the copolymerization of the α₂β^Aβ^S hybrid molecule and the absence of any significant copolymerization of the α₂γβ^S hybrid.     

The infuence of interchain compositional heterogeneity on the conformation in random copolymers of γ-benzyl-L-glutamate and L-valine

Variation in the solvent used for the copolymerization of γ-benzyl-L -glutamate and L -valine N-carboxyanhydrides provides copolymers which have variable interchain compositions, and this variation in interchain compositional heterogeneity is reflected in the solid-state conformations of the respective copolymers. Poly[Glu(OBzl)²⁹Val⁷¹] prepared in dioxane exhibits a β-structure, whereas a copolymer of the same average composition prepared in benzene/methylene chloride shows predominantly an β-helix conformation with a small amount of β-structure. The use of the monomer reactivity ratio permits the calculation of the average and incremental copolymer compositions at any conversion; thus, correlations between conformation and interchain compositional heterogeneity can be made. In general, copolymers prepared in dioxane show a greater distribution of chain composition and therefore permit a wider variety of conformation than copolymers prepared in benzene/methylene chloride under identical conditions.     

Synthesis of partly debranched starch-g-poly(2-acryloyloxyethyl trimethyl ammonium chloride) catalyzed by horseradish peroxidase and the effect on adhesion to polyester/cotton yarn

We performed a dual-modification of starch via debranching and graft copolymerization to improve its adhesion to fibers. We synthesized the partly debranched starch-g-poly(2-acryloyloxyethyl trimethyl ammonium chloride) (PDS-g-PATAC) using horseradish peroxidase in the presence of hydrogen peroxide and acetylacetone. PDSs of different molecular structures were prepared by debranching waxy cornstarch for different periods of time. With increasing debranching time, the degree of hydrolysis of PDS increased from 0.85 % (10 min) to 1.13 % (30 min), while the degree of branching decreased from 8.37 % to 7.99 %. Fourier transform infrared analysis confirmed that ATAC units had been successfully grafted onto the starch (debranched or not debranched). The degree of substitution (DS) and grafting ratio (GR) of the PDS-g-PATACs were characterized by ¹H nuclear magnetic resonance. The DS and GR of grafted starches positively related with debranching time. Thermogravimetry-differential thermogravimetry analysis showed that grafted starch had lower thermal stability than ungrafted starch. The adhesion of PDS-g-PATAC to polyester/cotton yarns was evaluated. The PATAC chains grafted onto the starch enhanced the adhesion of starch to polyester/cotton yarn. The grafted starch produced from the copolymerization of PDS (after debranching for 10 min), exhibited the strongest adhesion to polyester/cotton yarn with a resulting tensile strength of 98.20 N.     

Porous polyacrylamide monoliths in hydrophilic interaction capillary electrochromatography of oligosaccharides

Capillary electrochromatography (CEC) of oligosaccharides in porous polyacrylamide monoliths has been explored. While it is possible to alter separation capacity for various compounds by copolymerization of suitable separation ligands in the polymerization backbone, “blank” acrylamide matrix is also capable of sufficient resolution of oligosaccharides in the hydrophilic interaction mode. The “blank“ acrylamide network, formed with a more rigid crosslinker, provides maximum efficiency for separations (routinely up to 350,000 theoretical plates/m for fluorescently-labeled oligosaccharides). These columns yield a high spatial resolution of the branched glycan isomers and large column permeabilities. From the structural point of view, some voids are observable in the monoliths at the mesoporous range (mean pore radius ca. 35 nm, surface area of 74 m²/g), as measured by intrusion porosimetry in the dry state.     

Graft copolymerization of ethyl acrylate onto cellulose using ceric ammonium nitrate as initiator in aqueous medium

Ceric ammonium nitrate (CAN) in the presence of nitric acid has been used as efficient initiator for graft copolymerization of the ethyl acrylate onto cellulose at 35.0 +/- 0.1 degrees C. Graft copolymerization of ethyl acrylate onto cellulose has taken place through the radical initiation process. The graft yield and other grafting parameters have been evaluated by varying concentration of ethyl acrylate from 2.5 x 10(-1) to 15.0 x 10(-1) mol dm(-3) and ceric ammonium nitrate from 5.0 x 10(-3) to 25.0 x 10(-3) mol dm(-3) at constant concentration of the nitric acid (8.0 x 10(-2) mol dm(-3)). The rate of graft copolymerization has shown 1.5 order with respect to the concentration of the ceric ammonium nitrate. The graft copolymerization data obtained at different temperatures were used to calculate the energy of activation, which has been found to be 28.9 kJ mol(-1) within the temperature range from 20 to 50 degrees C. The effect of addition of cationic and anionic surfactants on graft copolymerization has also been studied. On the basis of the experimental observations, reaction steps have been proposed and a suitable rate expression for graft copolymerization has been derived.     

Basic polypeptides as histone models. Synthesis, conformation, and interaction with DNA of statistical copolymers (Lys x,Ala y)n.

Statistical copolymers (Lys^x,Ala^y)_n were synthesized by copolymerization of N-carboxyanhydrides of L -amino acids. The conformation of copolymers in aqueous solutions was investigated using circular dichroism (CD). Calculations based on the CD data showed that polymers (Lys^x,Ala^y)_n can exhibit a random conformation, an α-helix, and a β-structure in various ratios. CD spectra of complexes of copolymers with DNA prepared by gradual dialysis from a high ionic strength to 0.15 M NaCl can be correlated with the copolymer conformation in medium and high ionic strength. For copolymers forming an α-helix and β-structure, these spectra show resemblance with similar spectra of complexes of those histones that are able to exhibit ordered conformations.     

Synthesis and biological activity of (D)Ala2, Leu5-enkephalins containing hydrophilic or hydrophobic moieties

The synthesis in solution of some modified (D)Ala²,Leu⁵-enkephalins has been carried out. The lipophilic properties of the parent compound have been modified by amidation of the carboxyl function with alkylamines of increasing hydrophilicity to increase permeability of the blood-brain barrier. Attempts to reduce enzymatic degradation have been carried out either by reductive glucosamination or by amidation of the carboxyl function with 2-amino-2-deoxy-β-D-glucopyranose. Esterification of the carboxyl function of (D)Ala²,Leu⁵-enkephalin with polyethylenglycole 1000 has also been carried out. The effects induced by these modifications have been evaluated by in vitro and in vivo tests.     

Structure of histamine releasing guaianolides from Thapsia species

The structures of six hexaoxygenated guaianolides esterified with four non isomeric carboxylic acids have been established by ¹H NMR and ¹³C NMR spectroscopy. The acyl residues have been located by chemical ionisation mass spectrometry. Some of the acyl residues are novel for sesquiterpene lactones. The acyl residues in two additional guaianolides esterified with isomeric acids have been located by partial hydrolysis.     

Electronic structure and reaction mechanism as guides to the design of hybrid inorganic-organic polymers

Systematic approaches to the design of organofunctional cyclophosphazene monomers and their conversion to organic backbone polymers with cyclophosphazene substituents are described. A variety of methods including DFT calculations, photoelectron spectroscopy and copolymerization reactivity ratios show that the π electrons in an olefin attached to a cyclophosphazene undergo σ polarization towards the phosphazene. This effect may be mediated by electron donors on the olefin or, more effectively, by an insulating function between the olefin and the inorganic ring. Two optimized monomers, P₃N₃Cl₅OR (RC₆H₄CHCH₂, (CH₂)₄OC (O)CMeCH₂), have been prepared and their homo- and copolymerization behavior explored. Mixed phosphazene substituent systems have also been developed. Per substituted monomers, P₃N₃(OR)₆, have been developed and converted to cross linked, hyperbranched and cyclomatrix materials via multi arm polymerization.     

Dissection of the functional domains of the sarcoplasmic reticulum Ca2+-ATPase by site-directed mutagenesis

The results of site-directed mutagenesis studies of the sarcoplasmic reticulum Ca²⁺-ATPase are reviewed. More than 250 different point mutants have been expressed in cell culture and analysed by a panel of functional assays. Thereby, 40–50 important amino acid residues have been pinpointed, and the mutants have been assigned to functional classes: the Ca²⁺-affinity mutants, the phosphorylation-negative mutants, the ATP-affinity mutants, the E₁P mutants, the E₂P mutants, and the uncoupled mutants. Moreover, regions important to the specific inhibition by thapsigargin have been identified by analysis of Ca²⁺-ATPase/Na⁺, K⁺-ATPase chimeric constructs.     

Protease-catalyzed regioselective polymerization and copolymerization of glutamic acid diethyl ester

Protease-catalyzed polymerization and copolymerization of L-glutamic acid diethyl ester hydrochloride (1) have been performed in a buffer of high concentration. Papain and bromelain showed high catalytic activity toward the polymerization. H-H COSY NMR analysis of the product showed the exclusive formation of poly(alpha-peptide), which was further confirmed by comparison with NMR spectra of poly(alpha-methyl gamma-L-glutamate). The papain-catalyzed polymerization of gamma-methyl L-glutamate did not occur under the similar reaction conditions, supporting the regioselective production of the polymer having an alpha-peptide linkage from 1. The effects of the reaction parameters have been systematically investigated. The copolymerization of 1 with various amino acid esters took place by the papain catalyst to give peptide copolymers.     

How the extra methylene group affects the ligation properties of Glu vs. Asp and Gln vs. Asn amino acids: a DFT/PCM study

The p-xylylene monomers of parylene N, C and D have similar high polymerization reactivity. For effective copolymerization processes this fact is basically a drawback and for instance the copolymerization with styrene doesn’t go at all (Corley et al. J Pol Sc 13(68):137–156, [15]). Substitution of terminal hydrogen atoms by chlorine atoms reduces reactivity dramatically. 7,7,8,8-tetrachloro-p-xylylene and 2,5,7,7,8,8-hexachloro-p-xylylene can be isolated as yellow crystals. These crystals can be kept without any change in temperature below 0 ^∘C, but they polymerize slowly at room temperature. Perchloro-p-xylylene is stable even at elevated temperatures and does not polymerize under any conditions. Both 7,7,8,8-tetrachloro-p-xylylene and 2,5,7,7,8,8-hexachloro-p-xylylene copolymerize with various vinyl monomers, such as styrene and others. In this work the polymerization reactions of different chloro-derivatives of p-xylylene were modeled by means of the DFT method with hybrid correlation functionals (B3LYP and PBE0) and, for comparison, by means of the Hartree Fock methods. We inquired both initiation as well as elongation polymeric reactions for each of the reactants. We survied their reactivity analytically examining energetics and configurations in Szwarc-like process. The quantitative influence of chlorine atoms on the reactivity in polymerization steps, their location in the reactants’ structure (aromatic and/or aliphatic) as well as their number, were reviewed. The polymerizations of p-xylylenes with chlorine atoms as terminal aliphatic substituents yet revealed one more access path for parylenes’ in situ functionalization.

     

Studies on lectins XXXV. Water-soluble O-glycosyl polyacrylamide derivatives for specific precipitation of lectins

By copolymerization of acrylamide and allyl glycosides of various sugars, O-glycosyl derivatives of polyacrylamide copolymers were prepared. The sugar content of the copolymers can be varied in the range 0–40%, their sedimentation coefficient shows the values of 2.5–2.7 S; the molecular weight of an $\text{O-α-}\text{d}\text{-}\text{mannopyranosyl}$ polyacrylamide copolymer (29% mannose, s_20,w⁰ = 2.9 S) was estimated as 44 500. Copolymers with incorporated glycosyl residues interacting specifically with lectins yield precipitates with them upon immunodiffusion in cellulose acetate. The quantitative precipitin curves obtained with these copolymers are similar to those produced by quantitative precipitation of lectins with natural polysaccharides. The copolymers may serve as model substances of natural polysaccharides.     

Synthesis and flocculation property in dye solutions of β-cyclodextrin-acrylic acid-[2-(Acryloyloxy)ethyl] trimethyl ammonium chloride copolymer

In aqueous solution a cationic copolymer, poly (β-CD-AA-DMC) was synthesized via free radical copolymerization of acrylic acid (AA) esterified β-CD (β-CD-AA), and a cationic monomer [2-(Acryloyloxy)ethyl] trimethyl ammonium chloride (DMC). The copolymer's structure, morphology and thermal stability were demonstrated by FT-IR, ¹H NMR, SEM and TGA analysis. The flocculation properties of the copolymer were evaluated by the decolorization solutions of two reactive dyes using a jar test method. The decolorization efficiency is influenced by both the nature of the anionic dyes and the pH of the initial dye solution. Electrostatic adsorption played a more important role in flocculation of dyes than bridging of the polymer. Moreover, the inorganic salt decreased the efficiency of color removal.