Soil resource availability is much more important than soil resource heterogeneity in determining the species diversity and abundance of karst plant communities

Resource availability and heterogeneity are recognized as two essential environmental aspects to determine species diversity and community abundance. However, how soil resource availability and heterogeneity determine species diversity and community abundance in highly heterogeneous and most fragile karst landscapes is largely unknown. We examined the effects of soil resource availability and heterogeneity on plant community composition and quantified their relative contribution by variation partitioning. Then, a structural equation model (SEM) was used to further disentangle the multiple direct and indirect effects of soil resource availability on plant community composition. Species diversity was significantly influenced by the soil resource availability in shrubland and woodland but not by the heterogeneity in woodland. Abundance was significantly affected by both soil resource availability and heterogeneity, whereas variation partitioning results showed that soil resource availability explained the majority of the variance in abundance, and the contribution of soil resource heterogeneity was marginal. These results indicated that soil resource availability plays a more important role in determining karst plant community composition than soil resource heterogeneity. Our SEMs further found that the multiple direct and indirect processes of soil resource availability in determining karst species diversity and abundance were different in different vegetation types. Soil resource availability and heterogeneity both played a certain role in determining karst plant community composition, while the importance of soil resource availability far exceeded soil resource heterogeneity. We propose that steering community restoration and reconstruction should be highly dependent on soil resource availability, and multiple direct and indirect pathways of soil resource availability for structuring karst plant communities need to be taken into account.     

Experimental analysis of patch dynamics and community heterogeneity in tallgrass prairie

Effects of fire and small-scale soil disturbances on species richness, community heterogeneity, and microsuccession were investigated in a central Oklahoma tallgrass prairie. In the fall of 1985, 0.2 m² soil disturbances were created on burned and unburned tallgrass prairie. Vegetation on and off disturbances was sampled at monthly intervals over two growing seasons. During the first growing season, the cover of forbs and annuals, and species richness were significantly greater on versus off disturbances, but these differences did not persist through the second year. The variation in species composition among disturbed plots (heterogeneity) was significantly greater compared to undisturbed areas throughout the study. Fire had no consistent effect on richness and heterogeneity of vegetation on soil disturbances but fire reduced heterogeneity on undisturbed vegetation. Rate of succession, based on an increase in cumulative cover of perennial grasses over time, did not differ among treatments during the first growing season. During the second year, rate of succession was significantly greater on burned soil disturbances compared to unburned soil disturbances. These results suggest that while small-scale soil disturbances have primarily short-lived effects on grassland community structure, disturbances do help to maintain spatial and temporal variation in tallgrass prairie communities. Unlike in undisturbed vegetation, however, species richness and heterogeneity on soil disturbances were little effected by fire, but the rate of colonization onto disturbances appeared to be enhanced by fire.     

Light heterogeneity affects understory plant species richness in temperate forests supporting the heterogeneity–diversity hypothesis

One of the most important drivers for the coexistence of plant species is the resource heterogeneity of a certain environment, and several studies in different ecosystems have supported this resource heterogeneity–diversity hypothesis. However, to date, only a few studies have measured heterogeneity of light and soil resources below forest canopies to investigate their influence on understory plant species richness. Here, we aim to determine (1) the influence of forest stand structural complexity on the heterogeneity of light and soil resources below the forest canopy and (2) whether heterogeneity of resources increases understory plant species richness. Measures of stand structural complexity were obtained through inventories and remote sensing techniques in 135 1‐ha study plots of temperate forests, established along a gradient of forest structural complexity. We measured light intensity and soil chemical properties on six 25 m² subplots on each of these 135 plots and surveyed understory vegetation. We calculated the coefficient of variation of light and soil parameters to obtain measures of resource heterogeneity and determined understory plant species richness at plot level. Spatial heterogeneity of light and of soil pH increased with higher stand structural complexity, although heterogeneity of soil pH did not increase in conditions of generally high levels of light availability. Increasing light heterogeneity was also associated with increasing understory plant species richness. However, light heterogeneity had no such effects in conditions where soil resource heterogeneity (variation in soil C:N ratios) was low. Our results support the resource heterogeneity–diversity hypothesis for temperate forest understory at the stand scale. Our results also highlight the importance of interaction effects between the heterogeneity of both light and soil resources in determining plant species richness.     

Positive vs. negative interactions in Picris hieracioides L., a mid-successional species of Mediterranean secondary succession

A field experiment was designed to evaluate the importance offacilitative and competitive interactions in Picrishieracioides, a facultative biennial that colonises the early andthemid-stages of secondary succession in the Mediterranean region. Seedlings ofPicris hieracioides from populations of the early- (1year)and the mid-stages of field abandonment (15–40 years) were transplantedintwo adjacent old fields, abandoned for 4 (F4) and 20 years (F20) and thatdiffered markedly in floristic composition and vegetation structure. For twoyears, we experimentally manipulated competition (no-neighbours vs. naturalvegetation) and resource availability (addition of water and fertiliser vs.controls) in an attempt to evaluate their influence on survival, reproductivetiming, growth and reproductive output throughout the life cycle. Earlymortality was higher in non vegetated plots in both fields. Mortality ofseedlings was mainly due to herbivory by larvae of genusAgriotes. Flowering throughout the whole experiment wasalso facilitated by vegetation in the F4 field as a result of the positiveeffect of annual vegetation and remained unaffected in the F20 field because ofthe high competitive effect of established perennial vegetation. The additionofresources altered the effect of facilitation and competition on late seedlingsurvival. Survival was enhanced in the vegetated plots of the F4 field, becauseresource addition increased the shade provided by the canopy of vegetation,protected seedlings from temperature extremes and reduced water loss. Seedlingmortality also decreased in the F20 field but in a similar manner to vegetatedand non-vegetated subplots, and consequently the outcome of positive andnegative interactions remained neutral. The net effect of facilitation andcompetition resulted in interference later in the life cycle and appearedthrough final lower growth and reproduction in both fields. However, thegreatercompetition in 1994 than in 1995 in both fields, probably because the size ofthe rosettes, makes them less susceptible to competition, illustrates thedifficulty in predicting the outcome of competition solely of one season forfacultative biennial plants. The relative competition intensity calculatedusingonly survivors (RCI₁) was unaffected by habitat fertility in bothfields. In striking contrast, the relative competition intensity calculatedusing seedling mortality (RCI₂) was significantly higher in subplotswithout resource addition in both fields because of high seedling mortality invegetated subplots. Finally, there were no differences in the net effect offacilitation and interference processes among populations from early and midsuccessional stages showing that phenotypic plasticity buffers theenvironmentalselective pressures linked to successional processes.     

Soil Effects on Forest Structure and Diversity in a Moist and a Dry Tropical Forest

Soil characteristics are important drivers of variation in wet tropical forest structure and diversity, but few studies have evaluated these relationships in drier forest types. Using tree and soil data from 48 and 32 1 ha plots, respectively, in a Bolivian moist and dry forest, we asked how soil conditions affect forest structure and diversity within each of the two forest types. After correcting for spatial effects, soil‐vegetation relationships differed between the dry and the moist forest, being strongest in the dry forest. Furthermore, we hypothesized that soil nutrients would play a more important role in the moist forest than in the dry forest because vegetation in the moist forest is less constrained by water availability and thus can show its full potential response to soil fertility. However, contrary to our expectations, we found that soil fertility explained a larger number of forest variables in the dry forest (50 percent) than in the moist forest (17 percent). Shannon diversity declined with soil fertility at both sites, probably because the most dominant, shade‐tolerant species strongly increased in abundance as soil fertility increased.     

Fine-scale patterns of vegetation and environmental factors on an ombrotrophic mire expanse: a numerical approach

The vegetation within an ombrotrophic mire expanse in SE Norway is studied in detail. Percentage cover of 45 species in 436 sample plots (16 ×16 cm), dispersed on 26 transects, are recorded. In addition, species abundance in 6976 subplots (4×4 cm) are recorded. 14 variables are recorded for each of the sample plots, while only distance to the water-table is estimated for the subplots. Spatial co-ordinates are supplied for all sample- and subplots. DCA ordination of a data-set consisting of 412 sample plots reveals two ecologically interpretable vegetational gradients: the hummock-hollow gradient (DCA 1), and a gradient associated with the peat-production of the bottom layer (DCA 2). Passive DCA of subplots is used to get an impression of within sample plot heterogeneity, and shows that the fine-scale compositional turnover may be considerable. Partitioning of the variation in species abundance data is done by use of (partial) CCA. The fraction of unexplained variation is rather large for all the tested data-sets, but within the total variation explained, both distance to the water-table and spatial structure explain large parts.     

Plant composition in the Maya Biosphere Reserve: natural and anthropogenic influences

We studied the floristic composition and stand structure of lowland forests of the Maya Biosphere Reserve (MBR) of El Petén, Guatemala. Sampling was performed over a gradient of human influence, including a newly established returnee community (migrant), the cooperative Unión Maya Itzá, as well as an adjacent protected area within the core area of the MBR. Five 1-ha plots, each divided into 100 contiguous 10 × 10 m² subplots, were used to record presence of all tree and vine species. The study area is a low-diversity rainforest with a canopy layer dominated by species of Fabaceae, a shrub layer dominated by Rubiaceae, and vines dominated by Bignoniaceae. Vines were conspicuous both in number and in diversity. Variation in both tree life-form composition and canopy abundance pattern apparently reflect variation in intensity of forestry among the plots. The similarities between the plots in the cooperative (a logging plot and a settlement plot) with regard to species area curves, and mean number of tree and understory species per subplot, may indicate effects of disturbance (in general) on vegetation structure. Detrended correspondence analysis (DCA) was used to investigate gradients in species composition among the five plots (125 subplots) and to generate hypotheses about vegetation–environment relationships. The study area appears as a mosaic of site-specific forest types or associations determined by a particular species or groups of co-dominant species. The main environmental characteristics of the area determining species composition and structure are related to the drainage of soils and human disturbance.     

Long-Term Effects of Reclamation Treatments on Plant Succession in Iceland

The long‐term effects (20–45 years) of reclamation treatments on plant succession are examined at two localities in Iceland that were fertilized and seeded from 1954 to 1979 with perennial grasses or annual grasses, or left untreated. The areas that underwent reclamation treatments had significantly higher total plant cover (7–100%) than the untreated control plots (<5%), and floristic composition was usually significantly different between treated and untreated plots. Dwarf‐shrubs (Calluna vulgaris and Empetrum nigrum), bryophytes, biological soil crust, grasses, and shrubs characterized the vegetation in the treated plots, but low‐growing herbs that have negligible effects on the environment, such as Cardaminopsis petraea and Minuartia rubella, and grasses characterized the control plots. The seeded grass species had declined (<10%, the perennials) or disappeared (the annuals) but acted as nurse species that facilitated the colonization of native plants. It seems that by seeding, some factors that limit plant colonization were overcome. Soil nutrients, vegetation cover, litter, and biological soil crust were greater in the treated areas than the control plots. This may have enhanced colonization through an increase in soil stability and fertility, increased availability of safe microsites, increased moisture, and the capture of wind‐blown seeds. This study demonstrates the importance of looking at the long‐term effects of reclamation treatments to understand their impact on vegetation succession.     

Soil pH and species diversity in coastal dunes

Soil pH was measured at two different spatial scales in coastal dunes on Norderney, North Sea, and in Mecklenburg-Vorpommern, Baltic Sea, Germany. Relationships between the variability in soil pH, species richness and species diversity are presented. Species richness and diversity were highest in grey dunes, where soil pH was at intermediate levels; both variables were lower in yellow and brown dunes. The variability in pH increased with increasing species diversity and also with scale. Overall, soil pH variability decreased with increasing vegetation cover. The lowest pH heterogeneity was found in heath dominated by Empetrum nigrum L. and grey dunes dominated by Campylopus introflexus (Hedw.) Brid. Increasing abundance of dominant species and decreasing species diversity of vegetation apparently reduces soil heterogeneity. Decreasing species diversity of vegetation is likely to explain decreasing variability in soil pH.     

不同植被类型下红壤pH和交换性酸的剖面特征

研究湘南红壤丘陵区11种植被类型下施肥区域和未施肥区域红壤剖面(0～100 cm)pH及交换性酸的变化特征.结果表明: 施肥区域0～60 cm土层土壤的pH大小顺序为茶园<花生地<柑橘园,交换性酸含量大小为花生地≤柑橘园<茶园;种植茶树和花生后,表层(0～40 cm)相对底层(60～100 cm)均产生酸化,pH分别降低0.55和0.17,而种植柑橘后,土层间无显著差异.未施肥区域中,植被恢复区0～40 cm土层pH大小为白檵木林≤湿地松林<板栗园<白茅草地,交换性酸含量大小为白茅草地<板栗园<白檵木林≤湿地松林;天然林区0～20 cm土层中次生林和油茶林的pH均显著低于马尾松林0.34和0.20个单位,马尾松林和次生林交换性酸含量显著低于油茶林.与裸地相比,未施肥区域除白茅草地外,其他植被类型均加速了表层土壤酸化,其中天然次生林酸化最严重,pH降低0.52;未施肥区域除天然次生林外,其他植被类型均提高了深层土壤pH,其中白茅草地提升效果最显著,pH升高0.43.无论施肥区域还是未施肥区域,整体上随着土层深度的增加,植被类型或施肥对土壤酸度的影响越来越小.     

Environmental Heterogeneity Influences Successional Trajectories in Colombian Seasonally Dry Tropical Forests

Environmental characteristics have a major effect on the species composition of seasonally dry tropical forest. However, this effect has been little considered when describing secondary succession of this ecosystem. We tested the hypothesis that local environmental heterogeneity influences successional trajectories when high species richness is available. Changes in species composition and structure were described in 126 vegetation plots differing in successional stage and located along a topographical and soil nutrient gradient. Variation in community composition was partitioned between successional stage, environmental characteristics, and spatial structure using redundancy analyses. In addition, relationships between plot distance matrices for these factors were analysed by means of Mantel tests. High species turnover was observed during succession and species composition similarity was higher among late successional forest than among early and intermediate forests. A higher portion of variation in species composition was explained by environmental characteristics compared to successional stage, whereas the spatial structure of the data was weak. Our results suggest that in the region of study, variation in the successional trajectories is occurring owing to environmental heterogeneity, as well as to human disturbance and other unmeasured processes.     

云南松林次生演替阶段土壤细菌群落的变化

土壤细菌多样性是维持森林生态系统功能的关键因子,森林演替是影响其动态变化的重要因素.研究云南松林不同演替阶段土壤细菌群落结构及其多样性的变化规律,有助于深入理解森林生态系统恢复过程的驱动机制.本研究以云南省永仁县皆伐后形成的针叶林、针阔混交林和常绿阔叶林为对象,基于Illumina Hiseq高通量测序技术,分析森林演...     

Correlations among indices of forest soil nutrient availability in fertilized and unfertilized loblolly pine plantations

Summary Various laboratory indices of N and P availability in forest soils correlated poorly among themselves and with on-site ion exchange resin (IER) estimates in both unfertilized and N+P fertilized loblolly pine plantations. IER nutrient availability estimates had greatest within-site variability than laboratory indices. Net nitrification was minimal in laboratory incubation of the mineral soil despite high rates of ammonification. In contrast, IER NO₃–N values were usually of the same magnitude as IER NH₄–N values. In both fertilized and unfertilized stands, at least one N availability index was negatively correlated with at least one P index. Soil N and P availabilities were generally higher on fertilized plots than on unfertilized plots 3.5 years after fertilization, and IER estimates showed the greatest number of plots with increased levels. The greater ability of the IER method to distinguish between fertilized and unfertilized plots indicated the method was affected by on-site factors that the laboratory methods do not assess.     

文峪河上游河岸带不同植被类型土壤nirS反硝化菌群结构及功能

以文峪河上游河岸带不同演替阶段的8种植被类型五花草甸(WH)、沙棘林(HR)、柳树林(SS)、山杨林(PC)、山杨白桦林(PQ)、山杨白桦落叶松林(PQL)、落叶松云杉林(LP)和云杉林(PM)土壤为研究对象,采用高通量测序技术测定nirS反硝化细菌群落组成及相对丰度,乙炔抑制法测定反硝化酶活性(DEA)。对其土壤理化性质及反硝化细菌群落组成及相对丰度进行方差分析,采用冗余分析(RDA)和Spearman相关性分析不同植被类型及土层反硝化细菌群落结构及功能及土壤理化因子的关联性。结果表明:1)不同植被类型及土层土壤理化因子存在显著差异,柳树林(SS)0—15 cm土层硝态氮(NO~+_3-N)含量显著高于其他植被类型各土层;2)土壤反硝化菌群多样性指数在五花草甸(WH)、山杨白桦林(PQ)和云杉林(PM)中较其他植被类型高;3)沙棘林(HR)及柳树林(SS)反硝化酶活性(DEA)显著高于其他植被类型;4)不同植被类型反硝化优势菌群分布存在显著差异及特异性,如浮霉菌门(Planctomycetes)仅在落叶松云杉混交林(LP)和云杉林(PM)植被类型15—30 cm土层中分布;5)土壤pH、土壤有机碳(SOC)、土壤铵态氮(NH~+_4-N)和硝态氮(NO~+_3-N)等是影响土壤反硝化细菌群落结构及组成的重要因子,其中土壤铵态氮和硝态氮含量变化是导致土壤反硝化菌群多样性和反硝化酶活性差异的关键因子。本研究揭示了文峪河上游河岸带不同植被类型土壤反硝化细菌群落结构及功能的变化和分布特征,为进一步研究该区域河岸带氮素循环及水体污染防治提供重要参考依据。     

东灵山油松林和辽东栎林下土壤资源和光资源的空间特征

油松林和辽东栎林是中国暖温带具有代表性的森林植被林型。为揭示油松林和辽东栎林下土壤资源和光资源的空间特征,在东灵山相应植被下各设置一条100 m样线,利用HH 2高精度土壤水分仪(美国生产)沿样线每隔1 m测定土壤水分含量,并分析相应点土壤有机质含量;利用H em iV iew林冠分析系统每隔10 m测定森林的叶面积指数、林冠覆盖度、林冠均匀性、光资源状况;采用半方差方法分析土壤水分和有机质的空间异质性。(1)油松林与辽东栎林的叶面积指数、林冠覆盖度、辐射因子和林下光资源没有显著差异,但油松林林冠均匀性显著小于辽东栎林。(2)辽东栎林的间接辐射因子与林下总辐射呈显著正相关(R2=0.466,p=0.030),而油松林的间接辐射因子与总辐射无显著相关(R2=0.203,p=0.191)。(3)光资源的数量及其组成在油松林和辽东栎林下的变化非常相似,但光资源的组成与林冠特征的关系在两种森林间存在差异。(4)油松林下土壤水分和土壤有机质含量低于辽东栎林,但异质性恰好相反;油松林下这两种因子不具有显著的空间自相关性,而辽东栎林下具有显著的空间自相关性。(5)自然条件下,10 m尺度的林下辐射强弱与土壤水分之间并不存在显著负相关。     

石漠化强度对喀斯特植被演替过程土壤真菌组成及多样性的影响

喀斯特是我国南方广泛分布的地貌类型,土壤真菌对喀斯特植被演替恢复具有重要调节功能,不同石漠化程度的喀斯特区植被演替受到土壤微生物影响,因此研究不同石漠化区域植被演替阶段的土壤真菌组成及多样性,探索土壤真菌在喀斯特植被演替过程中的作用机制具有重要意义。本文采用时空替代法采集了不同石漠化程度（潜在、中度和强度）的喀斯特区植被演替乔木、灌木和草本演替阶段土壤样品,通过Illumina HiSeq第二代高通量测序分析了土壤真菌组成及多样性。结果表明,试验共获得3 871个OTUs,分属4门17纲116科174属;潜在和中度石漠化区各演替阶段土壤真菌优势门均为担子菌门,强度石漠化区各演替阶段土壤真菌无相同优势门;土壤真菌组成及多样性在潜在石漠化区表现为乔木>草本>灌木,中度石漠化区为灌木>乔木>草本,强度石漠化区为灌木>草本>乔木,且石漠化程度对真菌组成及多样性的影响大于植被演替的影响;土壤理化性质随石漠化程度及演替阶段发生变化,且显著影响真菌多样性指数,以碱解氮为主导因子显著影响土壤真菌群落。     

Pteridophyte diversity and species composition in four Amazonian rain forests

Abstract. Local variation in individual density, species composition, species richness and species diversity of terrestrial pteridophytes were studied at four sites in the tropical lowland rain forest of western Amazonia. 15 568 pteridophyte individuals representing 40 species were recorded in four plots. The variability among subplots within the same plot was considerable in all the characteristics measured (number of individuals, number of species, species diversity); the square 1‐ha plot was more homogeneous in these respects than any of the three 5 m by 1300 m transects. Species richness was affected by the density of individuals both within and among plots. Density of individuals was not affected by topographical position within any of the plots, whereas in some of the plots both species richness and species diversity were. Clustering and ordination analyses showed that floristically similar subplots could be found in different plots: although there was a tendency for subplots from the same plot to be floristically similar and therefore to group together, many recognized groups included subplots from two or more plots. Both within and among plots, the floristic differences corresponded to topographic position and were probably related to soil drainage. This was also evident in that the abundance patterns of many species followed the topography.     

The influence of alfalfa-switchgrass intercropping on microbial community structure and function

The use of nitrogen fertilizer on bioenergy crops such as switchgrass results in increased costs, nitrogen leaching and emissions of N₂O, a potent greenhouse gas. Intercropping with nitrogen-fixing alfalfa has been proposed as an environmentally sustainable alternative, but the effects of synthetic fertilizer versus intercropping on soil microbial community functionality remain uncharacterized. We analysed 24 metagenomes from the upper soil layer of agricultural fields from Prosser, WA over two growing seasons and representing three agricultural practices: unfertilized switchgrass (control), fertilized switchgrass and switchgrass intercropped with alfalfa. The synthetic fertilization and intercropping did not result in major shifts of microbial community taxonomic and functional composition compared with the control plots, but a few significant changes were noted. Most notably, mycorrhizal fungi, ammonia-oxidizing archaea and bacteria increased in abundance with intercropping and fertilization. However, only betaproteobacterial ammonia-oxidizing bacteria abundance in fertilized plots significantly correlated to N₂O emission and companion qPCR data. Collectively, a short period of intercropping elicits minor but significant changes in the soil microbial community toward nitrogen preservation and that intercropping may be a viable alternative to synthetic fertilization.     

Regeneration Potential of Floodplain Forests Under the Influence of Nonnative Tree Species: Soil Seed Bank Analysis in Northern Italy

Soil seed banks are the ecological memory of plant communities and might represent their regeneration potential. This study examines the soil seed bank in hardwood floodplain forests of the biosphere reserve “Valle del Ticino” (Northern Italy) to find out whether the natural forest vegetation can potentially be restored by the soil seed bank. We compared near natural forests of the phytosociological association Polygonato multiflori–Quercetum roboris with stands dominated by the nonnative tree species Robinia pseudoacacia and Prunus serotina in order to investigate whether the composition of the soil seed bank is significantly influenced by the composition of the main canopy tree species and soil properties. Soil seed bank samples were taken from 20 randomly selected plots in stands that were differentiated into four groups related to the dominant forest canopy species. The germinated plants were counted and their species determined. A total of 2,427 plants belonging to 84 species were recorded. The composition of the dominant tree species and soil parameters significantly influence the composition of the seed bank. The similarity with the standing vegetation was very low. Only 13% of the species in the soil seed bank represent the target vegetation. The low percentage of target species and the high percentage of nonnative species imply that the regeneration of near‐natural forest vegetation from the soil seed bank is not feasible. Consequently, disturbances that may activate the soil seed bank should be minimized. Thus, we recommend stopping the mechanical removal of the nonnative tree species in the Ticino Park .     

Landslide early succession in a neotropical dry forest

Early succession on large landslides in highly humanized areas that have a tropical dry climate is not well studied. This study documented vegetation recovery during the first 4 years after disturbance at a landslide on Casita Volcano, Nicaragua. We aimed to determine the main pathways and causes of change in community features, such as richness, biovolume, and species composition and verify the role played by environmental heterogeneity. Data consisting on number, covers and mean height of woody species and several abiotic factors related to fertility and stability of substrates were obtained from permanent plots in previously defined zones. Pathways of early succession were highly contingent on abiotic heterogeneity and landscape context and were mainly controlled by abiotic factors associated with fertility of substrates, and incidence of human disturbances. Those results might form the basis of a model of early succession on landslides located in densely populated areas within tropical dry ecosystems. Our results suggest that, rather than focusing research on large-scale disturbances, the study of succession in landslides of the type that occurred on Casita Volcano must point towards the response of ecosystems to a much more complex disturbance regime, in which human-induced disturbances play a major role.