Mapping Cortical Dynamics Using Simultaneous MEG/EEG and Anatomically-constrained Minimum-norm Estimates: an Auditory Attention Example

Magneto- and electroencephalography (MEG/EEG) are neuroimaging techniques that provide a high temporal resolution particularly suitable to investigate the cortical networks involved in dynamical perceptual and cognitive tasks, such as attending to different sounds in a cocktail party. Many past studies have employed data recorded at the sensor level only, i.e., the magnetic fields or the electric potentials recorded outside and on the scalp, and have usually focused on activity that is time-locked to the stimulus presentation. This type of event-related field / potential analysis is particularly useful when there are only a small number of distinct dipolar patterns that can be isolated and identified in space and time. Alternatively, by utilizing anatomical information, these distinct field patterns can be localized as current sources on the cortex. However, for a more sustained response that may not be time-locked to a specific stimulus (e.g., in preparation for listening to one of the two simultaneously presented spoken digits based on the cued auditory feature) or may be distributed across multiple spatial locations unknown a priori, the recruitment of a distributed cortical network may not be adequately captured by using a limited number of focal sources.Here, we describe a procedure that employs individual anatomical MRI data to establish a relationship between the sensor information and the dipole activation on the cortex through the use of minimum-norm estimates (MNE). This inverse imaging approach provides us a tool for distributed source analysis. For illustrative purposes, we will describe all procedures using FreeSurfer and MNE software, both freely available. We will summarize the MRI sequences and analysis steps required to produce a forward model that enables us to relate the expected field pattern caused by the dipoles distributed on the cortex onto the M/EEG sensors. Next, we will step through the necessary processes that facilitate us in denoising the sensor data from environmental and physiological contaminants. We will then outline the procedure for combining and mapping MEG/EEG sensor data onto the cortical space, thereby producing a family of time-series of cortical dipole activation on the brain surface (or "brain movies") related to each experimental condition. Finally, we will highlight a few statistical techniques that enable us to make scientific inference across a subject population (i.e., perform group-level analysis) based on a common cortical coordinate space.     

Simultaneous sludge reduction and nutrient removal (SSRNR) with interaction between Tubificidae and microorganisms: a full-scale study

A symbiotic ecosystem between Tubificidae and microorganisms was established at a full-scale wastewater treatment plant (WWTP). In this ecosystem Tubificidae were inoculated, and then adhered to the outer layers of carrier materials in an oxidation tank. During the long-term treatment of sewage volumes of 20,000 m(3)d(-1), the excess sludge production rate was reduced from 0.21 to 0.051 kg m(-3) and sludge settleability was significantly improved. When the influent concentrations of COD, NH(4)(+)-N, PO(4)(-)-P, and SS were in the ranges of 130.0-459.0 mg L(-1), 14.2-27.5 mg L(-1), 1.6-7.0 mg L(-1), and 60.0-466.0 mg L(-1), respectively, the COD and SS removal efficiency was increased by 8.7% and 13.6% within the symbiotic system compared to the control without Tubificidae. In addition, NH(4)(+)-N and phosphorus removal efficiency can also be improved. The results showed that both sludge reduction and nutrient removal were enhanced simultaneously significantly within the system utilizing the symbiotic interactions of Tubificidae and microorganisms.     

利用磷酸盐还原反应进行生物除磷的研究

磷酸盐生物还原反应可用于生物除磷。将猪粪与一种厌氧污泥按质量比4：1混合作为接种物进行分批培养实验,考察培养始末总磷浓度的变化,从而研究厌氧生物除磷的条件。结果表明,在分批培养中,葡萄糖和蛋白胨分别是厌氧生物除磷的良好碳源和氮源;适宜的初始pH6．50,适宜的培养温度36℃。     

基于平稳小波变换的EEG视觉的信号修正

眼球运动和眨眼会在眼球周围产生电信号,这种电信号的存在直接影响到对EEG信号的分析特征提取及EEG模式的分类等研究。本文提出了一种基于小波阈值滤噪方法来修正EEG信号中出现的视觉伪信号(OA)。这种用于EEG视觉伪信号处理的小波方法的实现过程如下：1)用平稳小波变换(SWT)对原始EEG信号进行处理;2)设置低频带信号的系数阈值;3)对滤噪后的信号进行重构。实验结果表明这种方法同时适用于眨眼和眼球运动产生的伪信号。最后,通过对采集的信号处理前后做了对比,说明其有效性。     

Automated Correlation and Averaging of Three-Dimensional Reconstructions Obtained by Electron Tomography

We have developed a least-squares refinement procedure that in an automated way performs three-dimensional alignment and averaging of objects from multiple reconstructions. The computer implementation aligns the three-dimensional structures by a two-step procedure that maximizes the density overlap for all objects. First, an initial average density is built by successive incorporation of individual objects, after a global search for their optimal three-dimensional orientations. Second, the initial average is subsequently refined by excluding individual objects one at a time, realigning them with the reduced average containing all other objects and including them into the average again. The refinement is repeated until no further change of the average occurs. The resulting average model is therefore minimally biased by the order in which the individual reconstructions are incorporated into the average. The performance of the procedure was tested using a synthetic data set of randomly oriented objects with Poisson-distributed noise added. The program managed well to align and average the objects at the signal/noise ratio 1.0. The increase in signal/noise ratio was in all investigated cases almost equal to the expected square root of the number of objects. The program was also successfully tested on a set of authentic three-dimensional reconstructions from anin situspecimen containingEscherichia coli70S ribosomes, where the immediate environment of the reconstructed objects may also contain variable amounts of other structures.     

An innovative membrane bioreactor (MBR) system for simultaneous nitrogen and phosphorus removal

Membrane filtration was integrated with a post-denitrification process to form an innovative membrane bioreactor (MBR) system for effective organic degradation and nutrient (N and P) removal. The system comprised of an aerobic tank, an anoxic tank, an intermediate sedimentation tank, and a membrane filtration tank. The sedimentation tank functioned not only as a rough settler for sludge–water separation before membrane filtration but also as an anaerobic chamber for P release. While half of the influent flowed into the aerobic tank, the other half was fed into the anoxic tank to favor the proliferation of phosphorus accumulating organisms (PAOs). The experiment was conducted continuously for about 430 days. With a short overall treatment time of less than 10 h for municipal wastewater, the MBR-based process could achieve the total organic carbon, total nitrogen, and total phosphorus removals of around 94%, 85%, and 87%, respectively. The growth and activity of PAOs in the MBR system were evidenced by the significant P release in the anaerobic chamber followed by the luxury P uptake in the membrane tank. With the DAPI and PAO_mix probe staining, the increases of PAOs and polyhydroxybutyrate (PHB) in sludge during the experiment were well observed under the fluorescent microscope.     

Geovibrio ferrireducens,a phylogenetically distinct dissimilatory Fe(III)-reducing bacterium

A new, phylogenetically distinct, dissimilatory, Fe(III)-reducing bacterium was isolated from surface sediment of a hydrocarbon-contaminated ditch. The isolate, designated strain PAL-1, was an obligately anaerobic, non-fermentative, motile, gram-negative vibrio. PAL-1 grew in a defined medium with acetate as electron donor and ferric pyrophosphate, ferric oxyhydroxide, ferric citrate, Co(III)-EDTA, or elemental sulfur as sole electron acceptor. PAL-1 also used proline, hydrogen, lactate, propionate, succinate, fumarate, pyruvate, or yeast extract as electron donors for Fe(III) reduction. It is the first bacterium known to couple the oxidation of an amino acid to Fe(III) reduction. PAl-1 did not reduce oxygen, Mn(IV), U(VI), Cr(VI), nitrate, sulfate, sulfite, or thiosulfate with acetate as the electron donor. Cell suspensions of PAL-1 exhibited dithionite-reduced minus air-oxidized difference spectra that were characteristic of c-type cytochromes. Analysis of the 16S rRNA gene sequence of PAL-1 showed that the strain is not related to any of the described metal-reducing bacteria in the Proteobacteria and, together with Flexistipes sinusarabici, forms a separate line of descent within the Bacteria. Phenotypically and phylogenetically, strain PAl-1 differs from all other described bacteria, and represents the type strain of a new genus and species, Geovibrio ferrireducens. Received: 26 September 1995 / Accepted: 28 February 1996     

季节性温度变化对CANON型潮汐流人工湿地脱氮的影响

探究了温度的季节性变化对基于亚硝化的全程自养脱氮(CANON)型潮汐流人工湿地(TFCW)脱氮性能及其微生物特性的影响。CANON型TFCW中的脱氮微生物群落在温度的季节性变化下会发生不同程度的改变,其脱氮途径及性能随之会出现周期性的波动。填料层温度在20.0 ℃以上时对TFCW脱氮性能及其中的优势脱氮菌群无显著影响,CANON作用是系统脱氮的主要途径。当填料层温度低于20.0 ℃时,厌氧氨氧化菌丰度与活性显著降低,在9.3~20.0 ℃时,亚硝酸盐氧化菌(NOB)的增殖及其活性的提高使TFCW中脱氮的主要途径由CANON作用演替为硝化/反硝化作用,系统对总氮(TN)的去除率仅为(34.8±13.0)%;在2.2~9.0 ℃时,TFCW中的厌氧氨氧化菌在受到抑制的同时仍保持着对NOB和反硝化菌群的相对竞争优势,系统脱氮重新依赖于CANON作用,其对TN的去除率为(54.8±4.8)%。该研究可为CANON型TFCW工艺的优化及工程化应用提供参考。     

Data requirements for reliable chemical shift assignments in deuterated proteins

The information required for chemical shift assignments in large deuterated proteins was investigated using a Monte Carlo approach (Hitchens et al., 2002). In particular, the consequences of missing amide resonances on the reliability of assignments derived from C and CO or from C and C chemical shifts was investigated. Missing amide resonances reduce both the number of correct assignments as well as the confidence in these assignments. More significantly, a number of undetectable errors can arise when as few as 9% of the amide resonances are missing from the spectra. However, the use of information from residue specific labeling as well as local and long-range distance constraints improves the reliability and extent of assignment. It is also shown that missing residues have only a minor effect on the assignment of protein-ligand complexes using C and CO chemical shifts and C inter-residue connectivity, provided that the known chemical shifts of the unliganded protein are utilized in the assignment process.     

有关猫听觉脑干电反应（ABR）两耳干涉作用的研究

用不同声强稳态白噪声和短声同时分别刺激两耳,观察白噪声负荷侧耳蜗破坏前后另一侧ＡＢＲ的改变,探讨两耳干涉作用及其可能的机制。结果显示,对侧耳蜗破坏前,４０ｄＢ和７５ｄＢ白噪声对０ｄＢ、４５ｄＢ、７０ｄＢ和７５ｄＢＳＰＬ的短声诱发的ＡＢＲ各波振幅均有明显影响（Ｐ＜０．０５０．０１）。耳蜗破坏后,同样条件下记录的ＡＢＲ振幅基本无明显变化（Ｐ＞０．０５）。提示白噪声对短声有一定的干涉作用。短声为７０ｄＢＳＰＬ时ＡＢＲＰ１波振幅的减小可能与中枢离中控制相关。