热休克后表达受抑基因的分子克隆及其表达特性

以人成骨肉瘤细胞株ＨＯＳ－８６０３为热休克模型,在利用ＤＤｍＲＮＡ方法筛选和克隆了一个热休克后表达受抑基因的ｃＤＮＡ片段的基础上,以该片段为探针,筛选ＨＯＳ－８６０３细胞的ｃＤＮＡ文库,获得该基因的全长ｃＤＮＡ克隆（ＨＳＳＧ－１）;ＤＮＡ序列测定表明该ｃＤＮＡ全长１４５６ｂｐ,编码２７６个氨基酸,经计算机辅助分析,该ｃＤＮＡ序列尚未被报道。经ＲＮＡ斑点杂交证实,该基因的表达于多种组织细胞之中,并且     

乙型肝炎病毒和丙型肝炎病毒的同步PCR扩增

介绍了一种从人血清中同步扩增和检测ＨＢＶ－ＤＮＡ和ＨＣＶ－ＲＮＡ的方法。ＨＣＶ－ＲＮＡ反转录成ｃＤＮＡ,这种ｃＤＮＡ和从ＨＢＶ中抽提出的ＤＮＡ一起,用根据ＨＢＶ、ＨＣＶ保守区序列设计的特异引物进行同步ＰＣＲ扩增,这种方法对于检测ＨＢＶ和ＨＣＶ重复感染很有用处     

中国丙型肝炎病毒基因型研究新进展

为了进一步了解中国丙型肝炎病毒基因型感染状态 ,我们建立了 5′ ＮＣＲＡＢＣ程序酶切分型法 :首先采用ＲＴＰＣＲ技术 5′ ＮＣＲ扩增ＨＣＶＲＮＡ阳性样品中的ｃＤＮＡ ,然后按照ＡＢＣ程序进行分型 ,Ａ应用ＢＨＨ(ＢｓｒＢⅠ ,ＨａｅⅡ ,ＨｉｎｆⅠ )复合内切酶消化 5′ ＮＣＲｃＤＮＡ ,Ｂ应用ＢｓｔＵⅠ消化 ,Ｃ应用ＨａｅⅢ消化 ,电泳检测片段大小。应用该方法对临床采集的ＨＣＶＲＮＡ阳性血清进行分型 ,在国内首次发...     

HCV5＇端非编码区cDNA的体外转录

采用逆转录聚合酶链反应（ＲＴ－ＰＣＲ）从广东省一例慢性丙型肝炎病人血清中获得丙型肝炎病毒（ＨＣＶ）５＇端非编码区（５＇ＮＣＲ）３０２ｂｐ的ｃＤＮＡ片段,经补齐和提纯后插入ｐＵＣ１９质粒,获得的重组体ｐＵＮ进行序列测定。将ｐＵＮ的目的基因亚克隆进体外转录载体ｐＳＰＯＲＴＩ多克隆位点的ＥｏｏＲＩ和ＰｓｔＩ切点之间,所得重组体ｐＳＮ线性化后由Ｔ＿７ＲＮＡ多聚酶及ＳＰ６ＲＮＡ多聚酶引导体外转录反应,产物经凝胶电泳及特异引物ＲＴ－ＰＣＲ,证实ＳＰ６引导的是正义ＲＮＡ,Ｔ７合成的是反义ＲＮＡ,其大小分别力４２９ｂｐ和３６２ｂｐ。并证实所得ＲＮＡ力ＨＣＶ５＇ＮＣＲｃＤＮＡ转录而来。获得的ＨＣＶ５＇ＮＣＲｃＤＮＡ和ＲＮＡ在常规逆转录和ＰＣＲ步骤中用于设立有效的模板对照,对消除假用性及评估试剂有重要意义。同时,ＨＣＶ５＇ＮＣＲ体外转录载体的构建可用于制各ＲＮＡ探针和反义ＲＮＡ,改进后还可作为定量ＰＣＲ的竞争性模板。     

编码天麻抗真菌蛋白cDNA的分子克隆

用重组ＤＮＡ 技术研究了编码天麻抗真菌蛋白（ＧＡＦＰ）的基因,从天麻（Ｇａｓｔｒｏｄｉａ ｅｌａｔａＢｌ．）块茎中提取Ｐｏｌｙ（Ａ） ｍ ＲＮＡ 后合成ｃＤＮＡ,构建成表达型ｃＤＮＡ 文库,用纯化的蛋白质探针通过免疫筛选找出对应的ｃＤＮＡ 克隆。在进一步证明所选用的ｃＤＮＡ 克隆含有重组的λ－ｐｈａｇｅ ＤＮＡ 后,提取和纯化含有插入片段重组子的ＤＮＡ,用Ｅｃｏ ＲＩ酶切分析可见插入片段。已分离出编码天麻抗真菌蛋白的基因     

利用PCR技术行反义寡核苷酸体外抗丁型肝炎病毒基因组RNA中核酶的研究

设计一对ＰＣＲ引物,其中上游引物的５’端除目的基因外,还加Ｔ７ＲＮＡ聚合酶启动子序列,以质粒（ｐＳＶＬＤ３）为模板,通过ＰＣＲ扩增出带有Ｔ７ＲＮＡ聚合酶启动子序列的１３９ｂｐ的ｃＤＮＡ片段,它含有丁型肝炎病毒（ＨＤＶ）基因组ＲＮＡ中核酶（Ｒｉｂｏｚｙｍｅ）区的ｃＤＮＡ该核酶具有自身裂解功能,经测序发现该ｃＤＮＡ有２个碱基变异,以此ＰＣＲ产物为模板,通过Ｔ７ＲＮＡ聚合酶,转录出核酶的前体,并观察到其     

丙型肝炎病毒PNA打点杂交检测方法同RT—PCR方法的比较

采用ＨＣＶ基因组结构区Ｃ区ｃＤＮＡ探针和非结构区ＮＳ３－４区ｃＤＮＡ探针,建立了用打点杂交检测血清中ＨＣＶ ＲＮＡ的方法,同采用ＨＣＶ基因组５＇端非编码区的一对寡核苷酸引物通过逆转录－聚合酶链式反应检测血清中ＨＣＶ ＲＮＡ折方法相比较,发现两种方法都能快速早期和特异的检出血清中ＨＣＶ ＲＮＡ,但ＲＴ－ＰＣＲ法敏感性优于ＲＮＡ打点杂交法。对于无血清学指标的慢性ＮＡＮＢ肝炎病人的诊断,可采用这两种方法     

草鱼出血病病毒基因组的cDNA合成、克隆及部分序列分析

采用差速离心的方法纯化感染草鱼出血病病毒的细胞悬液。提纯的病毒粒子经蛋白酶Ｋ处理和酚氯仿抽提,在１％琼脂糖凝胶电泳条件下分离得到１１条ｄｓＲＮＡ,利用柱离心式胶回收试剂盒纯化各基因片段。纯化的ｄｓＲＮＡ溶于９０％的ＤＭＳＯ中,７０℃变性１５ｍｉｎ,然后采用随机引物法反转录合成各基因片段的ｃＤＮＡ,并平头连接于ｐＺＥｒＯ２．０载体的ＥｃｏＲＶ位点,电转化ＴＯＰ１０感受态细胞。重组质粒经酶切、ＰＣＲ扩增得到大小不等的插入片段,ｃＤＮＡＲＮＡ斑点杂交的结果进一步证实其插入为目的基因片段。采用循环ＰＣＲ测序的方法,对其插入片段进行了序列测定,对其中第１１片段的部分序列作了报道。     

应用逆转录聚合酶链反应法扩增类胰岛素生长因子Ⅱ基因

利用酸性异硫氰酸胍－酚－氯仿一步法从人胚胎组织中提取总ＲＮＡ,经Ｏｌｉｇｏ（ｄＴ）纤维柱分离纯化出ｍＲＮＡ。用逆转录与聚合酶链反应相结合的ＲＴ－ＰＣＲ法,扩增出人类胰岛素生长因子Ⅱ的ｃＤＮＡ片段,在限制性内切酶ＳｍａＩ存在的连接体系中,将扩增出的ｃＤＮＡ片段克隆进ＰＵＣ１２的ＳｍａＩ位点处。经限制性内切酶ＥｃｏＲＩ,ＳａｌＩ,Ｅｃｏ４７Ⅲ酶切鉴定其方向。以重组质粒的双链ＤＮＡ为模板,用末端终止法测     

反义凝血酶受体基因的表达对人ASMC增殖的影响

介入治疗后再狭窄的发生严重降低了该治疗手段的最终疗效．为探讨再狭窄的发生机理、寻找有效的预防手段,利用反义ＲＮＡ技术构建了含有部分反义凝血酶受体（ＡＴＲ）ｃＤＮＡ片段的真核表达质粒ｐｃＤＮＡ３／ＡＴＲ,并观察了其对培养的人主动脉平滑肌细胞（ＡＳＭＣ）增殖的影响．结果表明ｐｃＤＮＡ３／ＡＴＲ的瞬时转染即能显著抑制人ＡＳＭＣ的３Ｈ－ＴｄＲ参入量,且该作用与导入的ＤＮＡ量呈剂量依赖性．说明部分反义凝血酶受体基因的表达可以抑制ＡＳＭＣ的增殖     

人肝细胞生长因子cDNA克隆在CHO细胞中的表达

肝细胞生长因子是一种由α、β链组成的杂合二聚体糖蛋白,能促进肝细胞、多种上皮细胞、内皮细胞和神经胶质细胞的有丝分裂,并对多种肿瘤细胞具有细胞毒性作用或者抑制其生长［１～４］,其作用无种属特异性,如人肝细胞生长因子能促进大鼠肝细胞增殖［５］。由于天然Ｈ...     

An efficient and rapid method for cDNA cloning from difficult templates using codon optimization and SOE-PCR: with human RANK and TIMP2 gene as examples

As gene cloning from difficult templates with regionalized high GC content is a long recognized problem, we have developed a novel and reliable method to clone such genes. Firstly, the high GC content region of the target cDNA was synthesized directly after codon optimization and the remaining cDNA fragment without high GC content was generated by routine RT-PCR. Then the entire redesigned coding sequence of the target gene was obtained by fusing the above available two cDNA fragments with SOE-PCR (splicing by overlapping extension-PCR). We have cloned the human RANK gene (ten exons; CDS 1851 bp) using this strategy. The redesigned cDNA was transfected into an eukaryotic expression system (A459 cells) to verify its expression. RT-PCR and western blotting confirmed this. To validate our method, we also successfully cloned human TIMP2 gene (five exons; CDS 660 bp) also having a regionalized high GC content. Our strategy for combining codon optimization and SOE-PCR to clone difficult genes is thus feasible and potentially universally applicable.     

An alternatively processed mRNA generated from human hepatocyte growth factor gene.

We recently reported the isolation and sequencing of cDNA for human hepatocyte growth factor (hHGF) [Miyazawa, K., Tsubouchi, H., Naka, D., Takahashi, K., Okigaki, M., Arakaki, N., Nakayama, H., Hirono, S., Sakiyama, O., Takahashi, K., Gohda, E., Daikuhara, Y. & Kitamura, N. (1989) Biochem. Biophys. Res. Commun. 163, 967-973]. In the present study, we report the sequence of another cDNA clone for a shorter form of hHGF mRNA. Comparison of the sequence with that of the hHGF cDNA revealed that the two sequences are identical in their 5' ends up to 865 nucleotides downstream from the translation-initiation site, then completely diverge from each other. By Northern blot analysis, the hHGF-related 1.5-kb mRNA, which corresponded to the newly isolated cDNA variant, was identified in human placenta. Sequence analysis of a human genomic HGF clone showed that the diverged 3'-terminal portion of the mRNA is generated by alternative RNA-processing events utilizing a specific exon. The mRNA could encode a short hHGF molecule of 290 amino acids corresponding to the N-terminal portion of hHGF which consists of 728 amino acids. In order to examine the effect of the predicted translation product on hepatocyte growth, an expression plasmid for the cDNA variant was constructed and transfected into Cos cells. Immunoblotting analysis showed that the transfected Cos cells produced a protein of about 33 kDa. The protein product did not stimulate DNA synthesis by rat hepatocytes in primary culture.     

A barley gene (rsh1) encoding a ribonuclease S-like homologue specifically expressed in young light-grown leaves

 A group of frequent cDNA clones from a young-leaf cDNA library was found to code for a homologue of S-ribonucleases (S-RNases) involved in gametophytic incompatibility and the so-called S-like RNases active in flowers and in vegetative tissues. The derived amino acid sequence starts with a signal peptide and has a 27-amino-acid C-terminal extension of unknown function. The barley (Hordeum vulgare L.) gene, rsh1 (for RNase S-like homologue) corresponding to the cDNA clones was isolated. The gene has three introns and the position of one intron corresponds to the site of the single, small intron in the S-RNase genes. The deduced amino acid sequence of mature RSH1 shares 35% identical and 58% similar amino acid residues with an S-like RNase from tomato, RNase LE. However, two active-site histidine residues, conserved between all S and S-like RNases are replaced by serine residues in RSH1. The new barley RNase S-like homologue is clearly related to the family of active RNases but is probably not active as an RNase. Sequences from the same class of presumably inactive RNases have been recorded in maize, rice and sorghum. The barley gene is exclusively expressed in young leaf tissue and is substantially induced by light. Received: 26 July 1999 / Accepted: 26 October 1999     

人端粒酶逆转录酶(hTERT)基因第3内含子的克隆和分析

从端粒酶活性呈阳性的永生细胞株人肺腺癌细胞SPC A 1中分离了总RNA ,以此为模板 ,结合RT PCR技术和长模板PCR技术 ,用hTERT基因特异性引物扩增到一长约 2 .2kb的cDNA片段。将该片段纯化后克隆到通用测序载体T easyvector上得到重组质粒。用测序引物SP6和T7对该片段进行部分双向测序。经序列分析和同源比较推测该片段包含了hTERT基因的第 3内含子。该结果提示了RT PCR技术和长模板PCR技术用于真核生物基因内含子克隆的可行性。进一步的分析表明 ,该片段在不同细胞的RT PCR产物中的产量不同 ,提示hTERT基因前体mRNA中的第 3内含子可能在不同细胞中有不同的剪接效率。     

A single administration of adenoviral-mediated HGF cDNA permits survival of mice from acute hepatic failure

Heptatocyte growth factor (HGF) having a variety of biological activity was suggested as a protective agent against acute toxic hepatic injury or a potentially therapeutic agent. For the efficient in vivo application of this factor, we employed adenoviral-mediated HGF gene delivery system. In this study, we constructed E1-deleted recombinant adenovirus carrying cDNA of human HGF (Ad.hHGF) and elucidated that HGF was efficiently expressed in the liver of C57/BL mice. A mouse model of acute hepatic failure was induced by high dose (1000mg/kg) of thioacetamide (TA) administration. Mice infected with Ad.hHGF showed a dramatic resistance to TA-induced acute hepatic injury. Serum ALT was increased transiently and then the level was normalized in Ad.hHGF-infected mice with TA administration. Furthermore, the survival rate was remarkably enhanced in the mice infected with Ad.hHGF. In the histological examination, massive hepatic necrosis induced by TA was almost completely protected by HGF produced by Ad.hHGF. Our results indicate that a single dose of HGF-encoding adenoviral vector maintained liver function and prevented the progression of liver necrosis in a mouse model of acute hepatic failure.     

Sequence of human eosinophil-derived neurotoxin cDNA: identity of deduced amino acid sequence with human nonsecretory ribonucleases

Several clones of human eosinophil-derived neurotoxin (EDN) cDNA have been isolated from a lambda gt10 cDNA library prepared from mRNA derived from noninduced HL-60 cells. The amino acid (aa) sequence deduced from the coding sequence of the EDN cDNA is identical to the aa sequence of urinary nonsecretory RNase. Comparison of the aa and/or nucleotide (nt) sequences of EDN and other proteins possessing ribonucleolytic activity, namely bovine seminal RNase, human and rat pancreatic RNases, eosinophil cationic protein (ECP), and human angiogenin, shows extensive identity at half-cystine residues and at aa of active sites. Differences in aa sequences at the active sites are often the result of single nt changes in the codons. The data presented here support the concept of a RNase gene superfamily containing secretory and nonsecretory RNases, angiogenin, EDN and ECP.     

利用PCR方法从人染色体DNA中扩增G-CSF基因

利用PCR技术从染色体基因组DNA中扩增大DNA片段具有相当大的难度。本试验采用碱变性模板以及热启动等方法,成功地扩增出1.5kb的人基因组DNA,并讨论了影响扩增大DNA片段特异性和产量的因素。     

Inhibition of HIV-1 gene expression by a fragment of hnRNP U

Cellular proteins are now appreciated as critically involved in all steps of the human immunodeficiency virus type 1 (HIV-1) life cycle, and disrupting host functions essential for virus replication may provide novel antiviral approaches. Selection from a human complementary DNA (cDNA) library for clones able to induce resistance to infection by recombinant HIV-1 genomes resulted in the identification of a gene fragment that potently restricts HIV-1 activity. The active cDNA encodes an N-terminal fragment of the heterogeneous nuclear ribonuclear protein U (hnRNP U). The gene fragment specifically targets the 3' long terminal repeat (3'LTR) in the viral mRNA and blocks the cytoplasmic accumulation of HIV-1 mRNAs. The results suggest that HIV-1 requires machinery for the nuclear export of viral mRNAs that can be specifically blocked by an interfering gene.