Patterns of tree species richness in Jalisco,Mexico: relation to topography,climate and forest structure

The objective of this study was to identify the major environmental variables and components of forest structure associated with variability in tree species richness on a network of 806 permanent plots in the State of Jalisco, Mexico. Tree data recorded on the sample plots were used to characterize tree species richness by forest type and climatic conditions (temperature and precipitation) in the State. Species composition and other diversity indices were also calculated. Explanatory variables identified in a Poisson regression identified forest cover type, elevation, tree basal area, canopy closure, and winter precipitation as being important to changes in tree species richness. An “extreme quantile curve estimation” approach was then used to approximate the boundary that represented the maximum potential species richness response to the various levels of important variables. Maximum tree species richness decreased with increasing elevation. The relationships between maximum species richness and tree basal area, canopy closure, and winter precipitation followed a hump-back unimodal model, with intermediate values supporting the largest species richness. We believe that results of the current study will contribute to further development of a conservation plan for tree species in the State of Jalisco, Mexico.     

Differential diameter-size effects of forest management on tree species richness and community structure: implications for conservation

In this paper we tested the hypothesis that logging effects in the adult tree community reverberate upon the regeneration contingent. We examined the differences on the tree community between forest reserves and 10 year-old logged areas in the Yucatan Peninsula. We used a paired design in three independent sites to estimate the effects of logging on tree species richness, diversity, composition and structure. Analyses were conducted differentiating individuals of four diameter-size classes: 1–5, 5–10, 10–25, and >25 cm DBH. We found out that there were differential effects by size. Species richness in the smaller and larger diameter-size classes was significantly lower in logged areas. Floristic composition was also different between logged and unlogged areas, with a trend towards more secondary forest associated species and less primary forest associated species in logged areas, and a higher density of species represented by a single individual in unlogged reserves. In terms of structure, trees DBH <10 cm, lianas, and re-sprouting stumps were more abundant in logged areas. Our findings suggest that 10 years after logging, harvested areas show alterations in structure, and potentially a reduction in species richness. We suggest that to make timber extraction and forest conservation compatible at this site, it is necessary to gain a better understanding of the ecology and regeneration requirements of the less abundant species, and to assess whether current logging practices might hinder their permanence in the study area.     

Patterns of tree species richness in relation to environment in southeastern New South Wales,Australia

Abstract We present regression models of species richness for total tree species, two growth forms, rainforest trees (broadleaf evergreens) and eucalypts (sclerophylls), and two large subgenera of Eucalyptus. The correlative models are based on a data set of 166 tree species from 7208 plots in an area of southeastern New South Wales, Australia. Eight environmental variables are used to model the patterns of species richness, four continuous variables (mean annual temperature, rainfall, radiation and plot size), plus four categorical factors (topographic position, lithology, soil nutrient level and rainfall seasonality). Generalized linear modelling with curvilinear and interaction terms, is used to derive the models. Each model shows a significant and differing response to the environmental predictors. Maximum species richness of eucalypts occurs at high temperatures, and intermediate rainfall and radiation conditions on ridges with aseasonal rainfall and intermediate nutrient levels. Maximum richness of rainforest species occurs at high temperatures, intermediate rainfall and low radiation in gullies with summer rainfall and high nutrient levels. The eucalypt subgenera models differ in ways consistent with experimental studies of habitat preferences of the subgenera. Curvilinear and interaction terms are necessary for adequate modelling. Patterns of richness vary widely with taxonomic rank and growth form. Any theories of species diversity should be consistent with these correlative models. The models are consistent with an available energy hypothesis based on actual evapotranspiration. We conclude that studies of species richness patterns should include local (e.g. soil nutrients, topographic position) and regional (e.g. mean annual temperature, annual rainfall) environmental variables before invoking concepts such as niche saturation.     

Host preferences and differential contributions of deciduous tree species shape mycorrhizal species richness in a mixed Central European forest

Mycorrhizal species richness and host ranges were investigated in mixed deciduous stands composed of Fagus sylvatica, Tilia spp., Carpinus betulus, Acer spp., and Fraxinus excelsior. Acer and Fraxinus were colonized by arbuscular mycorrhizas and contributed 5% to total stand mycorrhizal fungal species richness. Tilia hosted similar and Carpinus half the number of ectomycorrhizal (EM) fungal taxa compared with Fagus (75 putative taxa). The relative abundance of the host tree the EM fungal richness decreased in the order Fagus > Tilia >> Carpinus. After correction for similar sampling intensities, EM fungal species richness of Carpinus was still about 30–40% lower than that of Fagus and Tilia. About 10% of the mycorrhizal species were shared among the EM forming trees; 29% were associated with two host tree species and 61% with only one of the hosts. The latter group consisted mainly of rare EM fungal species colonizing about 20% of the root tips and included known specialists but also putative non-host associations such as conifer or shrub mycorrhizas. Our data indicate that EM fungal species richness was associated with tree identity and suggest that Fagus secures EM fungal diversity in an ecosystem since it shared more common EM fungi with Tilia and Carpinus than the latter two among each other.     

Response of early and late semiarid seral species to nitrogen and phosphorus gradients

Above- and below-ground biomass production, nitrogen (N) and phosphorus (P) tissue concentrations, and root: shoot ratios were examined for five species that are characteristic of a semiarid successional sequence under controlled greenhouse conditions. In two simultaneous experiments, seedlings of one forb, two grass, and two shrub species important in a sagebrush successional sere, were subjected to seven levels of N and P. Results of the experiments suggest distinct differences in nutrient response patterns between early and late seral species. Early seral species produced more biomass but had lower tissue nutrient concentrations than late seral species. As N and P availabilities decreased, late seral species displayed characteristics indicative of increasing competitive advantage over those of early seral species. Root: shoot ratios of the five species primarily reflected patterns related to lifeform, but with some early and late seral characteristics. Results from this study 1) confirm that nutrient use pattern, nutrient availability, and seral position relationships characteristic of mesic ecosystems hold equally true for semiarid systems, and 2) suggest that nutrients are important organizing factors in semiarid ecosystems.     

Shoot life span in relation to successional status in deciduous broad-leaved tree species in a temperate forest

In trees, leaf life span is closely related to successional status. Although leaves are attached to shoots, shoot life span has been insufficiently studied in the context of ecological systems. Interspecific variation in shoot survivorship was investigated over 27 months in 15 temperate hardwood tree species. Relationships between shoot architecture and shoot survival were also investigated. Shoot life span was shortest in early successional species, and longest in late successional species, in each of the families Betulaceae and Fagaceae. In Salicaceae, all of which were early successional species, shoot life span was longer in mountainous than in riparian species. Early successional or riparian species distributed longer shoots densely, even in proximal positions on mother shoots, resulting in mutual shading and consequent early and massive shoot shedding. By contrast, late successional or mountainous species concentrated shoots in distal positions, allowing shoots to receive equally favorable light, resulting in a longer life span. These results reveal close relationships between shoot life span and environmental resource availability or successional status and suggest a causal relationship between shoot shedding and shoot architecture.     

Fern richness,tree species surrogacy,and fragment complementarity in a Mexican tropical montane cloud forest

We related pteridophytes versus tree species composition to identify surrogate measures of diversity, and complementarity of seven cloud forest fragments. Forest structure, and fern and tree composition were determined in 70 (2 × 50 m) transects. Fern density (10,150–25,080 individuals/ha) differed among sites. We recorded 83 fern species in the transects. Nonparametric richness estimators indicated that more sampling effort was needed to complete fern inventories (14 more species). However, ferns recorded outside of the transects increased richness to 103 species (six more species than predicted). Twenty-eight species were unique and rare due to special habitat requirements (Diplazium expansum, Hymenophyllum hirsutum, Melpomene leptostoma, Terpsichore asplenifolia), or were at a geographical distribution edge (Diplazium plantaginifolium, Lycopodium thyoides, Pecluma consimilis, Polypodium puberulum). Correlations between fern richness and tree richness and density were not significant, but were significant between fern richness and fern density, between epiphytic fern density and tree richness and density. Tree richness is not a good surrogate for fern diversity. Only three species were recorded in all fragments (Polypodium lepidotrichum, P. longepinnulatum, P. plebeium); thus fragments pteridophytes compositions are highly complementary, but more similar for ferns than for trees. A regional conservation approach which includes many small reserves needs to focus supplementarity on patterns of tree and fern species richness.     

A central Amazonian terra firme forest. I. High tree species richness on poor soils

Tree size, density, and species richness were established for three one-hectare plots of terra firme forest in central Amazonian Brazil. In the three hectares, 1916 individual trees with DBH 10 cm were sampled. A total of 58 families, 181 genera, and 513 species were determined. Hectare A had 285 species, 138 genera, and 47 families; hectare B 280 species, 123 genera, and 48 families; and hectare C 280 species, 125 genera, and 44 families. Comparably high species richness in Amazonia has heretofore only been reported from western Amazonia. This dispels the idea that high species richness can only develop in areas with rich soils and relatively high rainfall. It is suggested that such high species richness is the result of a combination of habitat heterogeneity and geological history. These high diversity forests, because they occur on nutrient poor soils, can be protected with little or no impact on development in the region because the soils are essentially useless for agriculture and for supporting long-term cattle pasture.     

Recovery of species richness and conservation of native Atlantic forest trees in the cacao plantations of southern Bahia in Brazil

The Atlantic forests of southern Bahia in Brazil present great species richness and a high degree of endemism. A large part of these native forests were transformed into cacao plantations in an agroforestry system known locally as cabrucas, where native trees were culled and cacao was planted under the shade of remaining trees. The present study analyzed the influence of time of implantation (age) and time of abandonment of management practices on tree species diversity of cabruca plantations to evaluate the capacity for conservation and recovery of species richness of native Atlantic Forest trees in cabrucas. Phytosociological surveys were conducted in five cabrucas with different conditions of age and state of abandonment. All trees, including hemiepiphytes and excluding the cacao plants, with a minimum stem diameter of 10 cm at breast height, were surveyed within a 3-ha sampling area in each plantation. A total of 2514 individual trees belonging to 293 species and 52 families were recorded in the five cabrucas. The Shannon diversity index varied from 3.31 to 4.22 among the cabrucas and was positively correlated with the time of abandonment (r = 0.97). The new cabrucas showed the highest values of estimated total richness (Chao) and the highest proportion of late successional species than the old ones. All areas preserved a very high proportion of native forest species while the three old cabrucas showed a higher proportion of exotic species than the two new ones. Thus the exotic species seem to replace more of the native species in the long run because of management practices and local preferences. The cabrucas presented also a high capacity for the regeneration of tree species richness after abandonment. Simple alterations in management practices could improve the recruitment of late successional species in these areas. Economic incentives may be necessary for the farmers to adopt management practices to retain native species which bring no economic returns.     

Species richness and abundance of forest birds in relation to radiation at Chernobyl

The effects of low-level radiation on the abundance of animals are poorly known, as are the effects on ecosystems and their functioning. Recent conclusions from the UN Chernobyl forum and reports in the popular media concerning the effects of radiation from Chernobyl on animals have left the impression that the Chernobyl exclusion zone is a thriving ecosystem, filled with an increasing number of rare species. Surprisingly, there are no standardized censuses of common animals in relation to radiation, leaving the question about the ecological effects of radiation unresolved. We conducted standardized point counts of breeding birds at forest sites around Chernobyl differing in level of background radiation by over three orders of magnitude. Species richness, abundance and population density of breeding birds decreased with increasing level of radiation, even after controlling statistically for the effects of potentially confounding factors such as soil type, habitat and height of the vegetation. This effect was differential for birds eating soil invertebrates living in the most contaminated top soil layer. These results imply that the ecological effects of Chernobyl on animals are considerably greater than previously assumed.     

Composition and reactivity of DOC in forest floor soil solutions in relation to tree species and soil type

Metal coordinating propertiesof DOC (dissolved organic carbon), and henceits influence on heavy metal release andmineral weathering, depend on the compositionand properties of DOC. Tree species producelitter with different chemical composition anddegradability, and these differences mightinfluence the composition and reactivity of DOCin soil solutions. Accordingly, analysis ofcomposition and reactivity of DOC in soilsolution samples collected by centrifugationfrom 16 forest soil O horizons from the fourtree species beech (Fagus sylvatica L.),oak (Quercus robur L.), grand fir (Abies grandis Lindl.), and Norway spruce (Picea abies (L.) Karst.) on two clayey and twosandy soils were carried out. The compositionand properties of DOC were determined bycapillary zone electrophoresis, acid-basetitration, Cu ion titration, total elementalanalysis, IR and UV spectroscopy, and metalrelease assays. Concentrations of DOC rangedfrom 20 to 163 mM with pH ranging from 4.6 to7.3. Norway spruce produced the highest DOCconcentration, and the lowest pH. Carbon inlow-molecular-weight aliphatic carboxylic acids(LACA) accounted for less than 6% of DOC withformic and acetic acids as the most abundantLACAs. The DOC was cation exchanged and protonsaturated to obtain comparable forms of DOC.Titratable carboxylic acid and phenolic groupswere in the range 51 to 82 and 20 to64 mmol·mol^–1 C, respectively, with fewerphenolic groups in grand fir DOC as the onlysignificant difference. Infrared spectra offreeze-dried DOC samples suggest low contentsof aromatic C in the DOC especially from grandfir stands. Stability constants, log K of Cu-DOC complexes, determined by Cu ion titrationof DOC samples with fitting of the data to atwo-site binding model, were in the range 5.63to 6.21 for the strong binding sites and 3.58to 4.10 for the weak sites, but with nosignificant effects of tree species or site.Freeze-dried DOC samples were found to consistof 41 to 45% C, 38 to 49% O, 4.4 to 5.4% Hand 1.2 to 2.0% N and C/N ratios in the range26 to 42. Reactivity of DOC in terms of releaserates of Cd, Cu and Fe cations from a soilsample (flow cell experiments) showed nosignificant differences among DOC samples fromdifferent tree species and soil types.Apparently, only minor differences occur inchemical composition and reactivity ofequivalent concentrations of DOC in forestfloor soil solutions irrespective of origin,i.e. four tree species and two soil types. Soilsolution pH and the concentration of DOCproduced by various tree species are thecritical parameters when distinguishing amongtree species in relation to heavy metal releaseand mineral weathering.     

Effects of intensive forest management practices on insect infestation levels and loblolly pine growth

Intensive forest management practices have been shown to increase tree growth and shorten rotation time. However, they may also lead to an increased need for insect pest management because of higher infestation levels and lower action thresholds. To investigate the relationship between intensive management practices and insect infestation, maximum growth potential studies of loblolly pine, Pinus taeda L., were conducted over 4 yr using a hierarchy of cultural treatments. The treatments were herbaceous weed control (H), H + irrigation (I), H + I + fertilizer (F), and H + I + F + pest control (P). These treatments were monitored for differences in growth and insect infestation levels related to the increasing management intensities. The Nantucket pine tip moth, Rhyacionia frustrana (Comstock), was consistently found infesting study trees. In the third field season, the H + I + F + P treatment had significantly more southern pine coneworm, Dioryctria amatella (Hulst), attacks than the H and H + I treatments. There were significant differences in volume index (D2H) among all treatments after each of the four growing seasons. This study indicated that tree fertilization can increase coneworm infestation and demonstrated that tip moth management can improve tree growth initially. Future measurements will determine if the growth gains from tip moth management are transitory or sustainable.     

Non-woody life-form contribution to vascular plant species richness in a tropical American forest

We provide total vascular plant species counts for three 1-ha plots in deciduous, semi-deciduous and evergreen forests in central Bolivia. Species richness ranged from 297 species and 22,360 individuals/ha in the dry deciduous forest to 382 species and 31,670 individuals/ha in the evergreen forest. Orchidaceae, Pteridophyta and Leguminosae were among the most species-rich major plant groups in each plot, and Peperomia (Piperaceae), Pleurothallis (Orchidaceae) and Tillandsia (Bromeliaceae), all epiphytes, were the most species-rich genera. This dominance of a few but very diverse and/or widespread taxa contrasted with the low compositional similarity between plots. In a neotropical context, these Central Bolivian forest plots are similar in total species richness to other dry deciduous and humid montane forests, but less rich than most Amazonian forests. Nevertheless, lianas, terrestrial herbs and especially epiphytes proved to be of equal or higher species richness than most other neotropical forest inventories from which data are available. We therefore highlight the importance of non-woody life-forms (especially epiphytes and terrestrial herbs) in Andean foothill forest ecosystems in terms of species richness and numbers of individuals, representing in some cases nearly 50% of the species and more than 75% of the individuals. These figures stress the need for an increased inventory effort on non-woody plant groups in order to accurately direct conservation actions. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Avian richness and abundance in temperate Danish forests: tree variables important to birds and their conservation

Many studies on avian diversity and forest structure have focused onfiner scale forest variables such as foliage height diversity, foliagediversity, foliage density, vertical distribution of vegetation and horizontalvegetation density. From a conservation and forestry operational point of viewit would be of great interest if tree variables influenced directly by forestrymanagement decisions also had significant influence on avian richness andabundance. The species, age and size of a tree are examples of such treevariables. A great number of studies also have focused on avian diversityindices to reveal relationships with vegetation variables. However, it may bemore appropriate for foresters and conservation officers to operate withrichness and abundance measures directly, because indices complicateinterpretations on the relative importance of the two variables (richness andabundance) constituting the index. Fourteen managed temperate forests in Denmarkwere investigated for avian species richness and abundance and related tomeasures on different tree variables influenced directly by forestry managementdecisions. A rapid assessment method of avian richness and abundance wasemployed. It consisted of point-counts of bird richness and abundance within 1km² of forest. General linear models were tested byanalyses of variance statistics to reveal the tree variables most important toavian richness and abundance. It was found that more old trees, more treespecies and more tree size-classes correlated with more bird species andindividuals. However, some variation in bird richness and abundance was alsorelated to site quality and/or chance colonization. Moreover, it was shown thatthe guild of cavity-nesting birds correlated positively to age of tree stand.The potential number of bird species in Danish forest is similar to that innearly pristine forest in Poland, and much larger than that recorded in any ofthe forests investigated. Together with the results above, this indicates a highpotential for squeezing in more avian species in a higher quality forest from abiodiversity point of view. Modern Danish forestry affects tree variablesinfluenced directly by forestry management decisions. Such tree variables havegreat influence on avian richness and abundance, but simple measures in forestrypractices can be taken to enhance the conservation of bird richness andabundance.     

Foliar and fine root nitrate reductase activity in seedlings of four forest tree species in relation to nitrogen availability

Summary Seedlings of red maple, white pine, pitch pine and red pine were fertilized with nutrient solutions containing 4 levels of nitrate or ammonium additions. These levels corresponded to approximately 0.5, 1, 2 and 4 times normal availability of nitrogen in northeastern forests. Nitrate reductase (NR) activity was assayed in roots and leaves. Red maples treated with nitrate showed much higher leaf activities and higher ratios of leaf NR activity to root NR activity than any other species. Ammonium additions to red maple and white pine appeared to inhibit NR activity in leaves. With high nitrate additions, NR activity was induced in roots and leaves of pine species, but activity in roots remained much higher than in leaves.     

Pathogenesis-related genes and proteins in forest tree species

Trees occupy more than 30% of the land biosphere. They are important from both ecological and environmental standpoints and provide some of the most valuable commodities in the world economy. The perennial nature and size of trees are the critical determinants of their survival in response to biotic and abiotic stresses. The identification of the defense pathways at biochemical and genetic levels in tree pathosystems are beginning to be addressed. The basic physiological and biochemical mechanisms in woody perennials in response to pathogen is homologous to the model annual crop like Arabidopsis, but their secondary metabolic processes and ecological survival strategies are likely to be divergent from their annual counterparts. The limited domestication in tree species makes its molecular mechanisms less comparable to the highly pedigreed crop species. Recent reports have highlighted that the possible difference in genetic programs responding to invasive pathogens between annuals and perennials could be the spatial and temporal pattern of gene regulation. Several reviews on pathogen defense with reference to crop species are available, while similar reports from the tree species are limited to few commercially important species like Populus, Pinus, Picea, Eucalyptus, Castanea, and Pseudotsuga. This paper reviews the present status of pathogenesis-related genes and proteins from tree species with emphasis on the resistant genes and the proteins induced during systemic acquired resistance and highlights the ecological and evolutionary significance of defense-related genes from tree species.     

Avian responses to selective logging shaped by species traits and logging practices

Selective logging is one of the most common forms of forest use in the tropics. Although the effects of selective logging on biodiversity have been widely studied, there is little agreement on the relationship between life-history traits and tolerance to logging. In this study, we assessed how species traits and logging practices combine to determine species responses to selective logging, based on over 4000 observations of the responses of nearly 1000 bird species to selective logging across the tropics. Our analysis shows that species traits, such as feeding group and body mass, and logging practices, such as time since logging and logging intensity, interact to influence a species'' response to logging. Frugivores and insectivores were most adversely affected by logging and declined further with increasing logging intensity. Nectarivores and granivores responded positively to selective logging for the first two decades, after which their abundances decrease below pre-logging levels. Larger species of omnivores and granivores responded more positively to selective logging than smaller species from either feeding group, whereas this effect of body size was reversed for carnivores, herbivores, frugivores and insectivores. Most importantly, species most negatively impacted by selective logging had not recovered approximately 40 years after logging cessation. We conclude that selective timber harvest has the potential to cause large and long-lasting changes in avian biodiversity. However, our results suggest that the impacts can be mitigated to a certain extent through specific forest management strategies such as lengthening the rotation cycle and implementing reduced impact logging.     

Beetle species richness along the forest productivity gradient in northern Finland

The occurrence and habitat associations of the majority of invertebrate groups in boreal forests are poorly known, even though these groups represent perhaps over 99% of the animal species diversity in the forests. We studied the beetle (Coleoptera) fauna of four forest site types in northern Finland: in spruce mires, herb rich, mesic and sub-xeric forests. We sampled beetles in 32 study sites with five window and five pitfall traps in each. We describe the species abundance and diversity patterns within and among forest types and relate these patterns to structural components of the forests. The volume of decaying wood varied from 14 to 93 m³ ha⁻¹ among sampling sites. The total beetle catch consisted of 100 333 individuals and 435 species. The beetle species richness did not vary according to site fertility but the number of specimens increased with increasing fertility in heath forest sites. The richness of beetle species correlated only weakly with any of the stand structure characteristics at the stand level. Nevertheless, the detrended correspondence analysis (DCA) indicated that different beetle assemblages are characteristic of different forest types. The high level of beta-diversity in beetles among forest types indicates that focusing exclusively on, for example, key-biotopes (presumed biodiversity hotspots) when selecting areas to be set aside would result in a situation where a large proportion of species, even of the rare and threatened ones, is not included in this network of protected areas. This suggests that the complementary set of different forest types may be the best general strategy to maintain the overall beetle species diversity in boreal forests.