Current research on the late Pliocene and Pleistocene deposits north of Homa Mountain, southwestern Kenya

The late Pliocene and Pleistocene sediments of the Homa Peninsula in southwestern Kenya are richly fossiliferous, preserve Early Stone Age archaeological traces and provide one of the few paleoanthropological data sets for the region between the branches of the East African Rift Valley. This paper presents preliminary results of our ongoing investigation of late Pliocene and Pleistocene deposits at the localities of Rawi, Kanam East, Kanam Central and Kanjera. While fossils have been collected from the peninsula since 1911, little systematic effort has been made to place them into a broader litho-and chronostratigraphic framework. This project has conclusively demonstrated that fossils occur in good stratigraphic context at all of the study localities and that claims of sediment slumping (Boswell, 1935) have been greatly overstated (Behrensmeyer et al., 1995; Plummer & Potts, 1989). A provisional chronostratigraphic framework based on magneto- and biostratigraphy is presented here. We have revised the Plio-Pleistocene stratigraphy of the Rawi and Kanam gullies to include three formations: the Rawi, Abundu and Kasibos Formations. Based on magneto- and biostratigraphy, these formations are dated between approximately three and one m.y.a. (Gauss Chron-Jaramillo Subchron) (Cande & Kent, 1995). The Apoko Formation unconformably overlies the others and may be middle to late Pleistocene in age. All formations contain rich patches of fossils, and Acheulean artifacts have been surface collected from the Abundu and Kasibos Formations. Deposition of the fossil- and artefact-bearing sediments at Kanjera North began in the early Pleistocene and continued into the middle Pleistocene. Deposition at Kanjera South began over one million years earlier than previously thought, at approximately 2.2 m.y.a., and continued into the Olduvai Subchron (1.770-1.950 m.y.a.; Cande & Kent, 1995). Excavations have recovered Oldowan artefacts in association with well-preserved fossil fauna near the base of the sequence, the oldest archaeological traces yet known from southwestern Kenya.     

Fossil Cercopithecidae from the Hadar Formation and surrounding areas of the Afar Depression,Ethiopia

Hadar is well known as one of the most productive early hominin sites in the world. Between 1972 and 1994 a large sample of fossil cercopithecid specimens was collected from Hadar and the nearby sites of Geraru, Ahmado, and Leadu. At least five, and possibly six, species are present in the sample, including two chronological subspecies of Theropithecus oswaldi. T. o. cf. darti is known from the Middle Pliocene deposits in the Hadar area, along with Parapapio cf. jonesi, cf. Rhinocolobus turkanaensis, and a new species of Cercopithecoides, C. meaveae. There are also isolated molars from the Middle Pliocene of a large colobine which most likely represent cf. R. turkanaensis, but may also represent another large colobine known from the nearby site of Maka in the Middle Awash. T. o. oswaldi is represented from younger deposits of Late Pliocene and Early Pleistocene age, along with the large colobine Cercopithecoides kimeui. Throughout the sequence Theropithecus oswaldi is by far the most abundant cercopithecid, with the other taxa being comparatively rare. The Parapapio material from Hadar is important as the only securely identifiable material of the genus in the East African Pliocene. Furthermore, the Hadar material includes the only associated postcranial remains for the genus. If the tentative identification of Rhinocolobus is correct, then the Hadar sample is the only known occurrence outside of the Turkana Basin. Cercopithecoides meaveae is a new species, currently only known from the Hadar region, most importantly by the associated partial skeleton from Leadu. It appears to show adaptations for terrestrial locomotion. Finally, Cercopithecoides kimeui, a very large colobine previously known from Olduvai Gorge, Koobi Fora, and Rawi is recorded from the uppermost part of the Formation.     

Hominid fossil sample from Kanjera,Kenya: Description,provenance, and implications of new and earlier discoveries

Anatomically modern hominids were first collected from Kanjera, Kenya, by L.S.B. Leakey in the 1930s. Their apparent association with an archaic fauna was quickly challenged, throwing their age into doubt. Further unpublished hominid fragments were collected in 1974, 1975, 1981, and 1987. We review the context and morphology of the entire hominid sample. A minimum number of five individuals is represented by both cranial and postcranial elements. Several individuals have thickened cranial vaults, a characteristic originally thought to reflect their great antiquity. Vault thickening resulted from diploic expansion and may have been a response to acquired or inherited anemia. The entire hominid sample postdates the Kanjera Formation, deposited from the early into the middle Pleistocene. Most of the sample was derived from the black cotton soil capping the stratigraphic column. The morphology and context of the Kanjera hominids is consistent with human skeletal remains from nearby Holocene sites. Hominid 3 was probably an intrusive burial into an early Pleistocene bed. © 1995 Wiley-Liss, Inc.     

Phylogeography of the Angolan black and white colobus monkey,Colobus angolesnsis palliatus,in Kenya and Tanzania

Little is known about genetic variation in the 6–8 subspecies of Colobus angolensis, currently distinguished by pelage differences. We present a comparative genetic analysis of one of these subspecies, C. a. palliatus, in Kenya and Tanzania that assesses evolutionary relationships and patterns of mitochondrial genetic diversity in 103 individuals across its geographic range. Fecal samples from approximately 156 individuals were collected in four localities: (1) Diani Forest, Kenya; (2) Shimoni, Kenya; (3) Udzungwa Mountains National Park, Eastern Arc Mountains, Tanzania; and (4) Mount Rungwe, Southern Highlands, Tanzania. These samples represent at least six groups, with 5–15 samples from each. Comparative sequence analysis of a 1,795 base pair mtDNA fragment revealed 19 unique haplotypes in four populations. Phylogenetic analyses suggest that sampled Kenyan haplotypes are paraphyletic, with one Kenyan haplotype basal to all other sampled haplotypes. Analysis of molecular variance (AMOVA) suggests high levels of genetic variation among populations (Φ_ST 0.72, P<0.001). Genetic data are concordant with a subspecies level differentiation between C. a. palliatus populations in Kenya and those in Central and southern Tanzania, as earlier suggested based on pelage differences. This study highlights the evolutionary distinctiveness of Kenyan populations of C. a. palliatus relative to Tanzanian populations. Although C. a. palliatus habitat in Tanzania is currently better protected than in Kenya, our results suggest Kenyan and Tanzanian populations should be considered distinct units, and the protection of C. a. palliatus habitat in Kenya, as well as habitat connectivity between Kenyan populations, should be prioritized for conservation and management. Am. J. Primatol. 72:715–724, 2010. © 2010 Wiley‐Liss, Inc.     

Monomorium dryhimi sp. n., a new ant species (Hymenoptera, Formicidae) of the M. monomorium group from Saudi Arabia, with a key to the Arabian Monomorium monomorium-group

A new ant species, Monomorium dryhimi, is described based on workers from a single colony collected in Al Bahah, Asir Province, Saudi Arabia. This is the fourth species of the Monomorium monomorium-group collected from Arabian Peninsula, and appears to be closely related to Monomorium holothir Bolton, 1987, from Kenya. It can be distinguished by the following characters: head in profile with a weakly convex dorsal surface and a clearly convex ventral surface; eyes of moderate size with maximum diameter EL 0.19-0.25 × HW and with 6 ommatidia in the longest row; body colour yellow to light brownish yellow. In some individuals, head and gaster slightly but conspicuously darker than rest of body. Second halves of first and second gastral tergites with two characteristic brownish transverse bands. An identification key to the workers of the Arabian species of the Monomorium monomorium-group is presented. Scanning electron micrographs are given to illustrate the new species.     

Analysis of catch data from 1968 to 1976 from nine fish landings in the Kenya waters of Lake Victoria

Fish landing data collected by the Kenya regional fisheries officers from Homa Bay, Kaloka, Karungu, Marenga, Wichlum, Kendu Bay, Usenge, Dunga and Ngegu from 1968 to 1976 were statistically analysed to determine trends in the traditional fisherman's catch in the Kenya waters of Lake Victoria. Over the nine years a significant decline occurred for total catch and catches of Haplochromis spp., Tilapia spp. and Protopterus aethiopicus. Engraulcypris spp. catch increased significantly; while catches of Bagrus docmac and Clarias mossambicus fluctuated and no clearly defined trend emerged, although B. docmac catch seemed to be declining.
Overall indications were that as the catch of traditionally preferred fish declined, Engraulicypris spp., B. docmac, C. mossambicus and recently introduced Lates niloticus were becoming more important to the total catch.     

Distribution, abundance and niche breadth of birds: scale matters

We used local habitat niche breadth, local abundance and body size of non-passerine afrotropical birds in Tsavo East National Park (Kenya) to predict species distributional ranges in Kenya and across Africa. Univariate analysis revealed a significant positive correlation between local abundance and distribution only on the scale of Kenya. Performing a multiple regression analysis, local abundance, local habitat niche breadth and body size explained a significant part of the variance in bird distribution, again only on the Kenyan scale. From these results, we speculate that on continental scales distributions may be more influenced by macroclimatic conditions and historical factors, whereas distributions on regional scales are predominantly influenced by ecological factors.     

Adult habitat preferences, larval dispersal, and the comparative phylogeography of three Atlantic surgeonfishes (Teleostei: Acanthuridae)

Although many reef fishes of the tropical Atlantic are widely distributed, there are large discontinuities that may strongly influence phylogeographical patterns. The freshwater outflow of the Amazon basin is recognized as a major barrier that produces a break between Brazilian and Caribbean faunas. The vast oceanic distances between Brazil and the mid-Atlantic ridge islands represent another formidable barrier. To assess the relative importance of these barriers, we compared a fragment of the mitochondrial DNA (mtDNA) cytochrome b gene among populations of three species of Atlantic surgeonfishes: Acanthurus bahianus, A. chirurgus and A. coeruleus. These species have similar life histories but different adult habitat preferences. The mtDNA data show no population structure between Brazil and the mid-Atlantic islands, indicating that this oceanic barrier is readily traversed by the pelagic larval stage of all three surgeonfishes, which spend approximately 45-70 days in the pelagic environment. The Amazon is a strong barrier to dispersal of A. bahianus (d = 0.024, phiST = 0.724), a modest barrier for A. coeruleus (phiST = 0.356), and has no discernible effect as a barrier for A. chirurgus. The later species has been collected on soft bottoms with sponge habitats under the Amazon outflow, indicating that relaxed adult habitat requirements enable it to readily cross that barrier. A limited ability to use soft bottom habitats may also explain the low (but significant) population structure in A. coeruleus. In contrast, A. bahianus has not been collected over deep sponge bottoms, and rarely settles outside shallow reefs. Overall, adult habitat preferences seem to be the factor that differentiates phylogeographical patterns in these reef-associated species.     

A taxonomic revision of the small catarrhine primates from the early Miocene of East Africa

This paper presents a detailed systematic revision of the small catarrhine primates from the early Miocene of East Africa, recovered from sites in Western Kenya and in Uganda dated at between 22 and 17 m.y. Revised diagnoses and amended hypodigms for each of the species are presented. In addition to the currently identified taxa, Limnopithecus legetet Hopwood, 1933, Dendropithecus macinnesi (Le Gros Clark and Leakey, 1950) and Micropithecus clarki Fleagle and Simons, 1978, two further species are recognized. Limnopithecus evansi (MacInnes, 1943) is resurrected as a valid species, based primarily on previously described material from Songhor, and a new genus, Kalepithecus, is described here for the first time, in order to accommodate distinctive material from Songhor and Koru. The distribution of each species in time and space, and the phylogenetic relationships, are discussed in the light of this taxonomic revision.     

Dragonfly communities in coastal habitats of Kenya: indication of biotope quality and the need of conservation measures

This study highlights the species diversity of Odonata from coastal forests in southern Kenya, identifying indicator species for certain habitat types and emphasising the importance of conserving the last remaining coastal forest areas. A total of 78 species were recorded from coastal habitats in southern Kenya in this study; five species for the first time in eastern Africa. Dragonfly communities relative to different habitat types from indigenous forest to cultivated landscapes are described and compared. The forest species are often confined to coastal forests of East Africa. They are stenotopic and highly sensitive to disturbance. With increasing habitat disturbance the species richness increases at first, but most of the colonisers are eurytopic species that are common and widely distributed in Africa. The species assemblages between different habitat types in the disturbed landscape are more or less the same; the -diversity is much lower than in different habitat types of the natural coastal landscape. In the end, management implications are briefly discussed.     

A new skeleton of Theropithecus brumpti (Primates: Cercopithecidae) from Lomekwi,West Turkana,Kenya

A relatively complete skeleton of the fossil papionin, Theropithecus brumpti, from the site of Lomekwi, west of Lake Turkana, Kenya, is here described. The specimen, KNM-WT 39368, was recovered at the site of LO 5 (3 degrees 51'N and 35 degrees 45'E), from sediments dated to approximately 3.3Ma. The skeleton is that of an old adult male and preserves a number of articulated elements, including most of the forelimbs and tail. The cranial morphology is that of a large, early T. brumpti, exhibiting a deep mandible with a deeply excavated mandibular corpus fossa, and mandibular alveoli and cheek teeth arrayed in a reversed Curve of Spee. The forelimb skeleton exhibits a unique mixture of characteristics generally associated with a terrestrial locomotor habitus, such as a narrow scapula and a highly stable elbow joint, combined with those more representative of habitual arborealists, such as muscle attachments reflecting a large rotator cuff musculature and a flexible shoulder joint. The forelimb of KNM-WT 39368 also presents several features, unique toTheropithecus, which represent adaptations for manual grasping and fine manipulation. These features include a large, retroflexed medial humeral epicondyle (to which large pronator, and carpal and digital flexor muscles attached) and proportions of the digital rays that denote capabilities for precise opposition between the thumb and index finger. Taken together, these features indicate that one of the earliest recognized representatives of Theropithecus exhibited the food harvesting and processing anatomy that distinguished the genus through time and that contributed to its success throughout the later Pliocene and Pleistocene. Based on the anatomy of KNM-WT 39368 and the known habitat preference of T. brumpti, the species is reconstructed as being a generally terrestrial but highly dexterous, very large-bodied, sexually dimorphic, and possibly folivorous papionin. T. brumpti was adapted for propulsive quadrupedal locomotion over generally even ground, and yet was highly adept at manual foraging. The estimate of 43.8kg body mass for KNM-WT 39368 renders unlikely the possibility that the species, or at least adult males of the species, were highly arboreal. T. brumpti, as represented by KNM-WT 39368, is seen as a large, colorfully decorated, and basically terrestrial papionin that was restricted to riverine forest habitats in the Lake Turkana Basin from the middle to latest Pliocene.     

Fish habitat suitability and community structure in the equatorial Lake Naivasha,Kenya

Habitat suitability indices indicate how fish species respond to different habitat types. We assessed effects of habitat characteristics on fish distribution in an equatorial lake, Lake Naivasha, Kenya, where habitats vary according to substrate, depth and turbidity. Using monthly data between 2008 and 2010 using multi-mesh gill nets, catch per unit effort was used as a relative abundance measure to identify how habitat variables drive fish distribution. The focus was on commercial fishes: two introduced species (Cyprinus carpio and Micropterus salmoides) and two naturalised species (Oreochromis leucostictus and Tilapia zillii). Analyses revealed distinct preferences for different habitat variables by all commercial species except for C. carpio. For example, O. leucostictus preferred shallow waters with silt–clay substrates whilst M. salmoides preferred deeper waters with sandy/rocky substrates. Conversely, C. carpio showed no specialised habitat requirements. Niche overlaps were significantly lower between O. leucostictus and its respective sympatric species than between other species, a likely result of its territorial behaviour. The continued environmental degradation of Lake Naivasha may imperil the preferred habitats of the niche restricted M. salmoides, O. leucostictus and T. zillii. By contrast, the ubiquity of C. carpio may facilitate their invasion, and consequently sustain their dominance in the lake’s commercial fishery.     

First record of a cave species of Euscorpiops Vachon from Viet Nam (Scorpiones,Euscorpiidae, Scorpiopinae)

Euscorpiops cavernicola sp. n., belonging to the family Euscorpiidae Laurie, is described on the basis of two male and two female specimens collected in the Hua Ma cave located in the Quang Khe commune, Ba Be district of Bac Kan province in Viet Nam. The new species presents most features exhibited by scorpions within the genus Euscorpiops, however it may represent the first discovered Scorpiopinae species exhibiting certain adaptations to cave life.     

Late Pleistocene molluscan assemblages from the coral reefs of the Kenya coast

Since the Last Interglacial, there have been profound changes in the nature of the fringing reef along the Kenya coast. These are most apparent in the back-reef region where a marked decline in habitat diversity has led to a significant reduction in the variety of molluscan assemblages. Despite dramatic changes in the composition of these assemblages, very few species have become extinct. The four late Pleistocene species apparently missing from the Recent fauna of the Kenya coast still occur further east in the Indonesia-West Pacific region. There is evidence to suggest that range retractions from the periphery to the core region occurred at the same time in other parts of the Indo-Pacific province too. The province's margins may well have been more susceptible to fluctuations in certain environmental parameters, such as temperature, during the Pleistocene climatic cycles.     

Evaluation of habitat use and ecological carrying capacity for the reintroduced Eastern black rhinoceros (Diceros bicornis michaeli) in Ruma National Park,Kenya

We carried out a postrelease evaluation to determine predictors of habitat use and carrying capacity for the black rhinoceros (Diceros bicornis michaeli), which are critical for monitoring how the Ruma National Park sub-population may contribute to Kenya's meta-population strategy. We determined whether level of elevation, rockiness, shade, distance to fence, roads, and human settlements predict habitat use, differences in habitat and diet preference between female and male black rhinoceros, and the ecological carrying capacity (CC) of black rhinoceros in the park. We used standard ecological methods to collect data on predictors of habitat use, habitat preference and to estimate CC. Results show, first, that none of the environmental and anthropogenic factors evaluated predicted habitat use by black rhinoceros in the park. Second, although there was no significant difference in habitat preference between the sexes (U = 16.50, p = 0.306), there was a 60% difference in Jaccard's dissimilarity in diet selection between the sexes. Third, the park can support 65 black rhinoceros. Altogether, the findings suggest that the park has potential to support other sub-populations in Kenya. We recommend that future similar studies should incorporate population viability analysis and a community-based approach to forecast the species health and extinction risk.     

中国刺栲林的分类与分布初探

介绍了中国刺栲林的群落生态学特性及其分布特征等,根据刺栲在群落中的地位(优势种、共建种、伴生种或偶见种),将刺栲林分为三种主要的群落类型,每一大类中,又依据分布地的环境状况等,各分为几种不同的亚型。值得注意的是,在以刺栲为优势种的群落类型中,随着海拔的升高,其共建种表现出独特的替代规律。同时,进一步探讨了刺栲群落形成与维持机制,认为在刺栲自身生物学和生态学特性的基础上,生境异质性和环境及人为干扰导致刺栲形成了不同群落类型,但其内在机制的揭示还需进行深入的研究。最后,对其速生丰产林和混交林营造提出了一些建议。     

Vegetative compatibility and phenotypic characterization as a means of determining genetic diversity of Aspergillus flavus isolates

Toxigenic Aspergillus species produce mycotoxins that are carcinogenic, hepatotoxic and teratogenic immunosuppressing agents in both human and animals. Kenya frequently experiences outbreaks of aflatoxicosis with the worst occurring in 2010, which resulted in 215 deaths. We examined the possible reasons for these frequent aflatoxicosis outbreaks in Kenya by studying Aspergillus flavus diversity, phenotypes and mycotoxin profiles across various agricultural regions. Using diagonal transect random sampling, maize kernels were collected from Makueni, Homa Bay, Nandi, and Kisumu counties. Out of 37 isolates, nitrate non-utilizing auxotrophs complementation test revealed 20 vegetative compatibility groups. We designated these groups by the prefix “KVCG”, where “K” represented Kenya and consequently assigned numbers 1–20 based on our findings. KVCG14 and KVCG15 had highest distribution frequency (n = 13; 10.8 %). The distribution of the L-, S- and S-/L-morphotypes across the regions were 57 % (n = 21); 7 % (n = 3) and 36 % (n = 13), respectively. Furthermore, a unique isolate (KSM015) was identified that had characteristics of S-morphotype, but produced both aflatoxins B and G. Coconut agar medium (CAM) assay, TLC and HPLC analyses confirmed the presence or absence of aflatoxins in selected toxigenic and atoxigenic isolates. Diversity index (H′) analyses ranged from 0.11 (Nandi samples) to 0.32 (Kisumu samples). Heterokaryon compatibility ranged from 33 % (for the Makueni samples, n = 3) to 67 % (Nandi samples, n = 6). To our knowledge, this is the first reported findings for A. flavus diversity and distribution in Nandi, Homa Bay and Kisumu counties and may assist current and future researchers in the selection of biocontrol strategies to mitigate aflatoxin contamination as has been researched in Makueni and neighbouring counties.     

Diet and habitat overlap in two sympatric primate species, the Tana crested mangabey Cercocebus galeritus and yellow baboon Papio cynocephalus

Diet and habitat overlap was studied in two sympatric primate species sharing two neighbouring patches of fragmented gallery forest in Tana River, Kenya. Systematic data on feeding and ranging behaviour was collected on one group each of the Tana crested mangabey Cercocebus galeritus and yellow baboon Papio cynocephalus between August 1992 and February 1993. When rainfall was low and fruit resources scarce, yellow baboons spent most of their foraging time in the open woodlands while mangabeys foraged within the forest. At this period, diet and habitat overlaps between the two species were low. As rainfall increased, followed by a gradual rise in fruit availability, yellow baboons shifted their foraging range and both species became confined to the forest habitat. Consequently, both diet and habitat overlaps increased, peaking at the end of the rainy season. Mangabeys showed a reduced within-group dispersal and also spent significantly less time foraging in a given forest patch when yellow baboons were also present within the same forest patch.
Increased habitat and diet overlaps during the wet season need not have resulted in increased interspecific competition for food because at this period, fruits were readily available in the forest.