Do hotspots fall within protected areas? A Geographic Approach to Planning analysis of regional freshwater biodiversity

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Biogeochemical Hotspots in Forested Landscapes: The Role of Vernal Pools in Denitrification and Organic Matter Processing

Quantifying spatial and temporal heterogeneity in ecosystem processes presents a challenge for conserving ecosystem function across landscapes. In particular, many ecosystems contain small features that play larger roles in ecosystem processes than their size would indicate; thus, they may represent “hotspots” of activity relative to their surroundings. Biogeochemical hotspots are characterized as small features within a landscape that show comparatively high chemical reaction rates. In northeastern forests in North America, vernal pools are abundant, small features that typically fill in spring with snow melt and precipitation and dry by the end of summer. Ephemeral flooding alters soil moisture and the depth of the soil’s oxic/anoxic boundary, which may affect biogeochemical processes. We studied the effects of vernal pools on leaf-litter decomposition rates, soil enzyme activity, and denitrification in vernal pools to assess whether they function as biogeochemical hotspots. Our results indicate that seasonal inundation enhanced leaf-litter decomposition, denitrification, and enzyme activity in vernal pools relative to adjacent forest sites. Leaves in seasonally flooded areas decomposed faster than leaves in terra firme forest sites. Flooding also influenced the C, N, and P stoichiometry of decomposing leaf litter and explained the variance in microbial extracellular enzyme activity for phosphatase, β-d-glucosidase, and β-N-acetylglucosaminidase. Additionally, denitrification rates were enhanced by seasonal flooding across all of the study pools. Collectively, these data suggest that vernal pool ecosystems may function as hotspots of leaf-litter decomposition and denitrification and play a significant role in decomposition and nutrient dynamics relative to their size.     

All wet or dried up? Real differences between aquatic and terrestrial food webs

Ecologists have greatly advanced our understanding of the processes that regulate trophic structure and dynamics in ecosystems. However, the causes of systematic variation among ecosystems remain controversial and poorly elucidated. Contrasts between aquatic and terrestrial ecosystems in particular have inspired much speculation, but only recent empirical quantification. Here, we review evidence for systematic differences in energy flow and biomass partitioning between producers and herbivores, detritus and decomposers, and higher trophic levels. The magnitudes of different trophic pathways vary considerably, with less herbivory, more decomposers and more detrital accumulation on land. Aquatic-terrestrial differences are consistent across the global range of primary productivity, indicating that structural contrasts between the two systems are preserved despite large variation in energy input. We argue that variable selective forces drive differences in plant allocation patterns in aquatic and terrestrial environments that propagate upward to shape food webs. The small size and lack of structural tissues in phytoplankton mean that aquatic primary producers achieve faster growth rates and are more nutritious to heterotrophs than their terrestrial counterparts. Plankton food webs are also strongly size-structured, while size and trophic position are less strongly correlated in most terrestrial (and many benthic) habitats. The available data indicate that contrasts between aquatic and terrestrial food webs are driven primarily by the growth rate, size and nutritional quality of autotrophs. Differences in food-web architecture (food chain length, the prevalence of omnivory, specialization or anti-predator defences) may arise as a consequence of systematic variation in the character of the producer community.     

Boomerang ecosystem fluxes: organic carbon inputs from land to lakes are returned to terrestrial food webs via aquatic insects

Many ecosystems are linked to their adjacent ecosystems by movements of organisms. For instance, aquatic and terrestrial ecosystems are linked via emerging aquatic insects that serve as prey for terrestrial consumers. However, the role of these organisms in returning recycled carbon to the ecosystem from which it originated is not well known. This is due to the fact that values of carbon isotope signatures from terrestrial leaves and aquatic resources are usually similar and hence results of isotope mixing models need to be considered with caution. We overcame this problem by adding isotopically distinct terrestrial particulate organic carbon (tPOC) as a tracer to the experimental sides of two lakes that were divided in two equal halves with plastic curtains. We focused on aquatic insect larvae (Chironomidae) that fed on maize Zea mays leaves experimentally added to the lakes, and subsequently became prey for terrestrial predators (spiders) after emergence. The carbon isotope values of Chironomidae and spiders were significantly elevated in the lake treatment sides as compared to reference sides, whereas the values of all autochthonous resources were not affected by maize additions. Estimates from stable isotope mixing models indicated a low but demonstrable contribution of maize leaves to the diet of Chironomidae. Overlap between the isotope values of alder leaves, the major natural tPOC source, and autochthonous resources prevented a reliable quantification of allochthony of Chironomidae. However, we qualitatively demonstrated the flow of terrestrial particulate organic carbon to lakes, as leaf fall, and back to terrestrial surroundings via emerging insects. This ‘boomerang’ carbon flux between land and lakes blurs the distinction between autochthonous and allochthonous carbon sources.     

Changes in the Spatial Distribution of Fishes in Lakes Along a Residential Development Gradient

As the human demand for freshwater natural resources such as fish and drinking water increases, we may rely more heavily on models to predict the response of aquatic ecosystems to natural and anthropogenic disturbance. Theses models in turn implicitly depend on the underlying spatial distribution of organisms. In terrestrial ecosystems, increased natural resource utilization has transformed habitat and changed the spatial distribution of organisms, with subsequent negative effects on biota. Recent studies in lakes demonstrate that human development of lakeshores alters the physical habitat and nutrient cycles. The impact of such disturbance by humans on the spatial distribution of aquatic organisms, however, remains unknown. Here we quantify the effect of lakeshore development on the spatial distribution of fishes in 23 lakes in the US Pacific Northwest. We found a significant decrease in the spatial aggregation of fishes with increased shoreline development by humans, reflecting a loss of refugia and resource heterogeneity that favors aggregation among fishes. We also found that lakes with a high perimeter–surface-area ratio and a relatively shallow littoral zone had much higher levels of fish aggregation, suggesting the importance of terrestrial inputs to lakes. Finally, we found a marginally significant decrease in fish spatial aggregation with increased total phosphorus concentration, but no effect of chlorophyll concentration, water transparency, the predator–prey ratio, or number of species on fish spatial distributions. These results suggest that anthropogenic modification of shorelines is significantly altering the spatial distribution of important aquatic organisms, and that these changes may have important implications for predictive modeling of ecosystem dynamics.     

Paradigm shifts in soil organic matter research affect interpretations of aquatic carbon cycling: transcending disciplinary and ecosystem boundaries

New conceptual models that highlight the importance of environmental, rather than molecular, controls on soil organic matter affect interpretations of organic matter (OM) persistence across terrestrial and aquatic boundaries. We propose that changing paradigms in our thinking about OM decomposition explain some of the uncertainties surrounding the fate of land-derived carbon (C) in marine environments. Terrestrial OM, which historically has been thought to be chemically recalcitrant to decay in soil and aquatic environments, dominates inputs to rivers yet is found in trace amounts in the ocean. We discuss three major transformations in our understanding of OM persistence that influence interpretations of the fate of aquatic OM: (1) a shift away from an emphasis on chemical recalcitrance as a primary predictor of turnover; (2) new interpretations of radiocarbon ages, which affect predictions of reactivity; and (3) the recognition that most OM leaving soils in dissolved form has been microbially processed. The first two explain rapid turnover for terrigenous OM in aquatic ecosystems once it leaves the soil matrix. The third suggests that the presence of terrestrial OM in aquatic ecosystems may be underestimated by the use of plant biomarkers. Whether these mechanisms occur in isolation of each other or in combination, they provide insight into the missing terrestrial C signature in the ocean. Spatially and temporally varying transformations of OM along land–water networks require that common terrestrial source indicators be interpreted within specific environmental contexts. We identify areas of research where collaborations between aquatic and terrestrial scientists will enhance quantification of C transfer from soils to inland water bodies, the ocean, and the atmosphere. Accurate estimates of OM processing are essential for improving predictions of the response of vulnerable C pools at the interface of soil and water to changes in climate and land use.     

Regional-Level Inputs of Emergent Aquatic Insects from Water to Land

Emergent aquatic insects can provide inputs to terrestrial ecosystems near lentic and lotic waterbodies, producing ecosystem linkages at the aquatic–terrestrial interface. Although aquatic insect emergence has been examined for individual sites, the magnitude and spatial distribution of this phenomenon has not been examined at regional spatial scales. Here, we characterize this cross-habitat linkage for the state of Wisconsin, USA (169,639 km²). We combined GIS hydrological data with empirical data and predictive models of aquatic insect production to estimate annual aquatic emergence for the state of Wisconsin. Total emergence (lentic + lotic) was estimated to be about 6,800 metric tons of C y^?1. Lentic systems comprised 79% of total estimated insect emergence, primarily due to the large amount of lake surface area relative to streams. This is due to both basic ecosystem geometry and the overall abundance of lakes in Wisconsin. Spatial variation was high: insect emergence in southwestern Wisconsin was dominated by streams, whereas for most of the rest of the state insect emergence was dominated by lakes. Lentic inputs to land were highly concentrated (relative to lotic inputs) because lakes have a high ratio of surface area to buffer area. Although less concentrated, the spatial extent of lotic influence was greater: statewide, four times more land area fell within the 100 m buffer zones of streams compared to lakes. Large waterbodies (almost all of which were lakes) were hotspots of insect emergence and input to land. Aquatic insect inputs exceed estimated terrestrial secondary production in 13% of buffer area, and by a factor of 100 or more adjacent to large lakes (>50,000 ha). The model sensitivity analysis showed that the simplifying assumptions and sources of potential error in the input variables had a minor impact on the overall results.     

Tracing sources and pathways of dissolved nitrate in forest and river ecosystems using high-resolution isotopic techniques: a review

Nitrogen inputs into stream and river ecosystems, and the factors influencing those inputs, are important for various ecological and environmental concerns. Reliable information on where and how nitrogen compounds flow into aquatic ecosystems is indispensable to understanding the nutrient status of these ecosystems. Such information should include the biogeochemical mechanisms and hydrological controls of nutrient leaching into rivers from terrestrial systems such as forests, agricultural fields, and urbanized areas. Advancements in stable isotopomer measurements over the past two decades have expanded the variety of target substances and the precision with which they can be investigated. The high-throughput microbial denitrifier method allows for simultaneous measurement of nitrogen and oxygen isotope ratios and can provide high-resolution spatiotemporal information on both nitrate sources and biogeochemical processes. Although advanced techniques of stable isotope analysis have been used extensively to detect sources and estimate the relative contributions of multi-source systems in various rivers, there are still new horizons in investigating nitrogen transformations. For example, stable isotopes of oxygen (¹⁸O and ¹⁷O) occurring in nitrate due to atmospheric deposition can be used as natural tracers for evaluating internal nitrogen cycling; these isotopes are distinct from the oxygen within microbially generated nitrate in soils and water bodies. Another future challenge is improved use of nitrous oxide isotopomers in evaluating the relative contributions of nitrification and denitrification. Such analysis could provide insight into the nitrogen transformation that occurs under redox conditions at the boundary between terrestrial and aquatic systems, where nitrification and denitrification often occur simultaneously in soil and aquatic environments.     

淡水水生生态系统温室气体排放的主要途径及影响因素研究进展

淡水水生生态系统是全球陆域生态系统的重要组成部分,近年来,关于淡水水生生态系统温室气体排放的研究日益增多。基于国内外目前对湖泊、河流、水库及浅水池塘等淡水生态系统开展的最新研究成果,总结分析了淡水水生生态系统温室气体排放的3个主要途径及相应观测方法。气泡排放的观测方法有倒置漏斗法、开放式动态箱法和超声探测技术;植物传输的观测方法有密闭箱法和植株切割法;扩散途径的观测方法有静态浮箱法、模型估算法/梯度法、微气象学法、TDLAS吸收光谱法等。从物理因素、化学因素、生物因素、水动力因素和人类活动等角度,深入探讨了淡水水生生态系统温室气体排放通量的影响因素。最后根据当前研究中存在的不足,对今后的研究方向提出了建议,以期为我国进一步深入开展相关研究提供借鉴。     

Modeling denitrification in aquatic sediments

Sediment denitrification is a major pathway of fixed nitrogen loss from aquatic systems. Due to technical difficulties in measuring this process and its spatial and temporal variability, estimates of local, regional and global denitrification have to rely on a combination of measurements and models. Here we review approaches to describing denitrification in aquatic sediments, ranging from mechanistic diagenetic models to empirical parameterizations of nitrogen fluxes across the sediment-water interface. We also present a compilation of denitrification measurements and ancillary data for different aquatic systems, ranging from freshwater to marine. Based on this data compilation we reevaluate published parameterizations of denitrification. We recommend that future models of denitrification use (1) a combination of mechanistic diagenetic models and measurements where bottom-waters are temporally hypoxic or anoxic, and (2) the much simpler correlations between denitrification and sediment oxygen consumption for oxic bottom waters. For our data set, inclusion of bottom water oxygen and nitrate concentrations in a multivariate regression did not improve the statistical fit.     

“Hotspots” and “Hot Moments” of Denitrification in Urban Brownfield Wetlands

The influence of hydrology and soil properties on disproportionately high (“hot”) rates of nitrate (NO₃ ^?) removal via denitrification has been relatively well established. It is poorly understood, however, how the unique soil characteristics of brownfield wetlands contribute to or hinder denitrification. In this study, we examined drivers of “hot” denitrification rates over time (“hot moments”) and space (“hotspots”) in a watershed located on an unrestored brownfield in New Jersey, USA. We carried out measurements of denitrification over 9-day sequences during three seasons in sites with the same vegetation (Phragmites australis) but different soils (fill material, remnant marsh soils, flooded organic-rich soils). Denitrification rates above the 3rd quartile value of the data distribution were defined as “hot” and the most important drivers of these rates were determined using mixed models. Porosity and NO₃ ^? availability were the strongest spatial and temporal predictors, respectively, of high denitrification rates, with coarse-textured, unflooded fill materials unexpectedly supporting the highest rates. These results suggest that pore-scale hydrology is a more complex controller of wetland denitrification than previously thought. Course-textured, unflooded soils have high fractions of air-filled pores relative to flooded soils, leading to more endogenous NO₃ ^? production, and less diffusion constraints than fine-textured soils, leading to higher NO₃ ^? availability to denitrifiers in suboxic pores. Laboratory studies confirmed denitrifiers were limited by NO₃ ^? availability. However, denitrification rates in all soils matched or exceeded atmospheric NO₃ ^? deposition and stormwater NO₃ ^? loading at the site, suggesting that brownfields may play an important role in NO₃ ^? removal from urban stormwater.     

The influence of freshwater-lake subsidies on invertebrates occupying terrestrial vegetation

Studies investigating effects of aquatic-derived resource subsidies have often found large effects on terrestrial systems. Those studies have mostly been performed on effects of subsidies derived from oceanic and riverine systems, and very few have considered effects of subsidies from freshwater lakes. However, since lakes can produce large quantities of emergent aquatic insects that end up on nearby land, it is likely that also freshwater-lake subsidies influence terrestrial systems. We performed sweep-net collections of aquatic and terrestrial invertebrates at varying distances from the shore on vegetation of islands of varying size, in two freshwater lakes in northern Sweden, as well as on the surrounding mainland. We found that the amounts of aquatic insects on terrestrial vegetation decreased with distance from the shore, and that they were the most abundant on small islands, presumably because small islands have a higher perimeter-to-area ratio. Web-building spiders responded positively to the aquatic subsidy by being the most abundant on small islands and by showing a positive relationship with aquatic insect biomass. However, distance from the shore showed no effects on the spiders. Our results strongly support the view that terrestrial systems are subsidized by lakes, and indicate that freshwater-lake subsidies are important for terrestrial invertebrate community structure on adjacent land. Further, our study shows that ecosystems should be treated as interdependent, not as self-contained units, and may as such be important for an increased understanding of the nature and importance of resource flows across ecosystem boundaries.     

Herbivores Enforce Sharp Boundaries Between Terrestrial and Aquatic Ecosystems

The transitions between ecosystems (ecotones) are often biodiversity hotspots, but we know little about the forces that shape them. Today, often sharp boundaries with low diversity are found between terrestrial and aquatic ecosystems. This has been attributed to environmental factors that hamper succession. However, ecosystem properties are often controlled by both bottom-up and top-down forces, but their relative importance in shaping riparian boundaries is not known. We hypothesize that (1) herbivores may enforce sharp transitions between terrestrial and aquatic ecosystems by inhibiting emergent vegetation expansion and reducing the width of the transition zone and (2) the vegetation expansion, diversity, and species turnover are related to abiotic factors in the absence of herbivores, but not in their presence. We tested these hypotheses in 50 paired grazed and ungrazed plots spread over ten wetlands, during two years. Excluding grazers increased vegetation expansion, cover, biomass, and species richness. In ungrazed plots, vegetation cover was negatively related to water depth, whereas plant species richness was negatively related to the vegetation N:P ratio. The presence of (mainly aquatic) herbivores overruled the effect of water depth on vegetation cover increase but did not interact with vegetation N:P ratio. Increased local extinction in the presence of herbivores explained the negative effect of herbivores on species richness, as local colonization rates were unaffected by grazing. We conclude that (aquatic) herbivores can strongly inhibit expansion of the riparian vegetation and reduce vegetation diversity over a range of environmental conditions. Consequently, herbivores enforce sharp boundaries between terrestrial and aquatic ecosystems.     

澜沧江两条支流捕食线虫真菌水陆分布差异及关联性

为探究微生物在流域中的水、陆分布差异和相互关系,对澜沧江两条支流捕食线虫真菌多样性水陆分布进行了调查研究。在枯水期,以澜沧江一级支流沘江和黑惠江为研究区域,系统布设12个采样点(水流交汇点),每个采样点采集水、陆对称样品各5份,共采集土样120份。结合传统分离纯化、形态学及分子生物学方法筛选和鉴定菌株,按照《Nematode-Trapping Fungi》进行分类,共获得2属13种88株捕食线虫真菌;其中,陆地样品中共分离到2属11种45株,水体底泥中分离出1属10种43株,检出率分别为41.67%和53.33%。结果表明,澜沧江两条支流捕食线虫真菌在物种、属、群落结构3个层面上均存在水陆差异,也相互联系;陆地土壤可能是流域内捕食线虫真菌多样性的源,水流是其重要的传播因子。在流域生态系统内,水陆间的扩散限制和水流的连通性都是维持微生物物种多样性的重要机制。     

Integrative freshwater ecology and biodiversity conservation

Freshwater ecosystems provide goods and services of critical importance to human societies, yet they are among the most heavily altered ecosystems with an overproportional loss of biodiversity. Major threats to freshwater biodiversity include overexploitation, water pollution, fragmentation, destruction or degradation of habitat, and invasions by non-native species. Alterations of natural flow regimes by man-made dams, land-use changes, river impoundments, and water abstraction often have profound impacts on lotic communities. An understanding of the functional interactions and processes in freshwater ecosystems presents a major challenge for scientists, but is crucial for effective and sustainable restoration. Most conservation approaches to date have considered single species or single level strategies. In contrast, the concept of ‘Integrative Freshwater Ecology and Biodiversity Conservation’ (IFEBC) proposed herein addresses the interactions between abiotic and biotic factors on different levels of organization qualitatively and quantitatively. It consequently results in a more holistic understanding of biodiversity functioning and management. Core questions include modeling of the processes in aquatic key habitats and their functionality based on the identification and quantification of factors which control the spatial and temporal distribution of biodiversity and productivity in aquatic ecosystems. The context and importance of research into IFEBC is illustrated using case studies from three major areas of research: (i) aquatic habitat quality and restoration ecology, (ii) the genetic and evolutionary potential of aquatic species, and (iii) the detection of stress and toxic effects in aquatic ecosystems using biomarkers. In conclusion, our understanding of the functioning of aquatic ecosystems and conservation management can greatly benefit from the methodological combination of molecular and ecological tools.     

Denitrification in coastal ecosystems: methods, environmental controls, and ecosystem level controls, a review

In this review of sediment denitrification in estuaries and coastal ecosystems, we examine current denitrification measurement methodologies and the dominant biogeochemical controls on denitrification rates in coastal sediments. Integrated estimates of denitrification in coastal ecosystems are confounded by methodological difficulties, a lack of systematic understanding of the effects of changing environmental conditions, and inadequate attention to spatial and temporal variability to provide both seasonal and annual rates. Recent improvements in measurement techniques involving ¹⁵ N techniques and direct N₂ concentration changes appear to provide realistic rates of sediment denitrification. Controlling factors in coastal systems include concentrations of water column NO ₃ ^– , overall rates of sediment carbon metabolism, overlying water oxygen concentrations, the depth of oxygen penetration, and the presence/absence of aquatic vegetation and macrofauna. In systems experiencing environmental change, either degradation or improvement, the importance of denitrification can change. With the eutrophication of the Chesapeake Bay, the overall rates of denitrification relative to N loading terms have decreased, with factors such as loss of benthic habitat via anoxia and loss of submerged aquatic vegetation driving such effects.     

The application of Artificial Neural Network (ANN) model to the simulation of denitrification rates in mesocosm-scale wetlands

Denitrification and its regulating factors are of great importance to aquatic ecosystems, as denitrification is a critical process to nitrogen removal. Additionally, a by-product of denitrification, nitrous oxide, is a much more potent greenhouse gas than carbon dioxide. However, the estimation of denitrification rates is usually clouded with uncertainty, mainly due to high spatial and temporal variations, as well as complex regulating factors within wetlands. This hampers the development of general mechanistic models for denitrification as well, as most previously developed models were empirical or exhibited low predictability with numerous assumptions. In this study, we tested Artificial Neural Network (ANN) as an alternative to classic empirical models for simulating denitrification rates in wetlands. ANN, multiple linear regression (MLR) with two different methods, and simplified mechanistic models were applied to estimate the denitrification rates of 2-year observations in a mesocosm-scale constructed wetland system. MLR and simplified mechanistic models resulted in lower prediction power and higher residuals compared to ANN. Although the stepwise linear regression model estimated similar average values of denitrification rates, it could not capture the fluctuation patterns accurately. In contrast, ANN model achieved a fairly high predictability, with an R² of 0.78 for model validation, 0.93 for model calibration (training), and a low root mean square error (RMSE) together with low bias, indicating a high capacity to simulate the dynamics of denitrification. According to a sensitivity analysis of the ANN, non-linear relationships between input variables and denitrification rates were well explained. In addition, we found that water temperature, denitrifying enzyme activity (DEA), and DO accounted for 70% of denitrification rates. Our results suggest that the ANN developed in this study has a greater performance in simulating variations in denitrification rates than multivariate linear regressions or simplified nonlinear mechanistic model.     

Will climate change promote future invasions?

Biological invasion is increasingly recognized as one of the greatest threats to biodiversity. Using ensemble forecasts from species distribution models to project future suitable areas of the 100 of the world's worst invasive species defined by the International Union for the Conservation of Nature, we show that both climate and land use changes will likely cause drastic species range shifts. Looking at potential spatial aggregation of invasive species, we identify three future hotspots of invasion in Europe, northeastern North America, and Oceania. We also emphasize that some regions could lose a significant number of invasive alien species, creating opportunities for ecosystem restoration. From the list of 100, scenarios of potential range distributions show a consistent shrinking for invasive amphibians and birds, while for aquatic and terrestrial invertebrates distributions are projected to substantially increase in most cases. Given the harmful impacts these invasive species currently have on ecosystems, these species will likely dramatically influence the future of biodiversity.