Molecular genetics of avian proteins. XIII. Protein polymorphism in three species of Australian passerines.

An introduced species, the house sparrow (Passer domesticus), and two Australian native species, the welcome swallow (Hirundo tahitica neoxena) and the fairy martin (Petrochelidon ariel), have moderately low levels of protein polymorphism compared with domesticated or semi-wild 'managed' species of birds. Genetically varient proteins in these birds include transferrin, esterase, phosphoglucomutase, NADP-dependent isocitrate dehydrogenases, phosphogluconate dehydrogenase (decarboxylating) and glucose-6-phosphate dehydrogenase. Egg-white protein polymorphism confirms heterogeneity of egg colour, markings and shape, and suggests that approximately 10% of the 'clutches' in house sparrow nests represent infidelity (intraspecific nest parasitism). For the four enzymes capable of supplying reduced NADP for reductive biosyntheses in growth and detoxification, the house sparrow has more heterozygosity (29%) than either the welcome swallow (9-4%) or the fairy martin (2-3%) and the difference is highly significant statistically. The results are discussed in relation to possible biochemical correlates of MacArthur and Wilson's (1967) evolutionary strategies or r or K selection.     

Interspecific differences in the visual system and scanning behavior of three forest passerines that form heterospecific flocks

Little is known as to how visual systems and visual behaviors vary within guilds in which species share the same micro-habitat types but use different foraging tactics. We studied different dimensions of the visual system and scanning behavior of Carolina chickadees, tufted titmice, and white-breasted nuthatches, which are tree foragers that form heterospecific flocks during the winter. All species had centro-temporally located foveae that project into the frontal part of the lateral visual field. Visual acuity was the highest in nuthatches, intermediate in titmice, and the lowest in chickadees. Chickadees and titmice had relatively wide binocular fields with a high degree of eye movement right above their short bills probably to converge their eyes while searching for food. Nuthatches had narrower binocular fields with a high degree of eye movement below their bills probably to orient the fovea toward the trunk while searching for food. Chickadees and titmice had higher scanning (e.g., head movement) rates than nuthatches probably due to their wider blind areas that limit visual coverage. The visual systems of these three species seem tuned to the visual challenges posed by the different foraging and scanning strategies that facilitate the partitioning of resources within this guild.     

Bayesian meta-analysis of demographic parameters in three small, temperate passerines

Accurate estimates of population parameters are vital for estimating extinction risk. Such parameters, however, are typically not available for threatened populations. We used a recently developed software tool based on Markov Chain Monte Carlo methods for carrying out Bayesian inference (the BUGS package) to estimate four demographic parameters; the intrinsic growth rate, the strength of density dependence, and the demographic and environmental variance, in three species of small temperate passerines from two sets of time series data taken from a dipper and a song sparrow population, and from previously obtained frequentist estimates of the same parameters in the great tit. By simultaneously modeling variation in these demographic parameters across species and using the resulting distributions as priors in the estimation for individual species, we improve the estimates for each individual species. This framework also allows us to make probabilistic statements about plausible parameter values for small passerines temperate birds in general which is often critically needed in management of species for which little or no data are available. We also discuss how our work relates to recently developed theory on dynamic stochastic population models, and finally note some important differences between frequentist and Bayesian methods.     

Ultraviolet light and visual behaviour in the three-spined stickleback, Gasterosteus aculeatus

The ability of various vertebrates to perceive visual information in the ultraviolet region of the electromagnetic spectrum (300-400 nm) is receiving increasing interest. To date, many of these studies have concentrated on the role of ultraviolet perception in mate choice, yet there are several ways in which the ability to perceive ultraviolet information may affect other behaviours. Until now, it has been widely assumed that colour in the three-spined stickleback can be quantified by methods appropriate to the human visual system. However, evidence does exist that suggests that, in some populations, sticklebacks are capable of perceiving ultraviolet wavelengths. Using a behavioural technique, we tested the ability of the stickleback to perceive ultraviolet light under full-spectrum conditions to establish whether such wavelengths are utilised within their normal behavioural repertoire. We tested this ability by assessing whether subjects could locate hidden food in a foraging task where food position was indicated by the position of landmarks. These landmarks differed only in their ultraviolet content, appearing identical when viewed across the human visible region of the spectrum. We found that sticklebacks were able to use ultraviolet perception to locate a foraging patch under full-spectrum conditions.     

Shifting latitudinal clines in avian body size correlate with global warming in Australian passerines

Intraspecific latitudinal clines in the body size of terrestrial vertebrates, where members of the same species are larger at higher latitudes, are widely interpreted as evidence for natural selection and adaptation to local climate. These clines are predicted to shift in response to climate change. We used museum specimens to measure changes in the body size of eight passerine bird species from south-eastern Australia over approximately the last 100 years. Four species showed significant decreases in body size (1.8–3.6% of wing length) and a shift in latitudinal cline over that period, and a meta-analysis demonstrated a consistent trend across all eight species. Southern high-latitude populations now display the body sizes typical of more northern populations pre-1950, equivalent to a 7° shift in latitude. Using ptilochronology, we found no evidence that these morphological changes were a plastic response to changes in nutrition, a likely non-genetic mechanism for the pattern observed. Our results demonstrate a generalized response by eight avian species to some major environmental change over the last 100 years or so, probably global warming.     

PCR diagnostics underestimate the prevalence of avian malaria (Plasmodium relictum) in experimentally-infected passerines

Several polymerase chain reaction (PCR)-based methods have recently been developed for diagnosing malarial infections in both birds and reptiles, but a critical evaluation of their sensitivity in experimentally-infected hosts has not been done. This study compares the sensitivity of several PCR-based methods for diagnosing avian malaria (Plasmodium relictum) in captive Hawaiian honeycreepers using microscopy and a recently developed immunoblotting technique. Sequential blood samples were collected over periods of up to 4.4 yr after experimental infection and rechallenge to determine both the duration and detectability of chronic infections. Two new nested PCR approaches for detecting circulating parasites based on P. relictum 18S rRNA genes and the thrombospondin-related anonymous protein (TRAP) gene are described. The blood smear and the PCR tests were less sensitive than serological methods for detecting chronic malarial infections. Individually, none of the diagnostic methods was 100% accurate in detecting subpatent infections, although serological methods were significantly more sensitive (97%) than either nested PCR (61-84%) or microscopy (27%). Circulating parasites in chronically infected birds either disappear completely from circulation or to drop to intensities below detectability by nested PCR. Thus, the use of PCR as a sole means of detection of circulating parasites may significantly underestimate true prevalence.     

Ultraviolet photopigment sensitivity and ocular media transmittance in gulls,with an evolutionary perspective

Gulls (Laridae excluding Sternidae) appear to be the only shorebirds (Charadriiformes) that have a short wavelength sensitive type 1 (SWS1) cone pigment opsin tuned to ultraviolet (UV) instead of violet. However, the apparent UV-sensitivity has only been inferred indirectly, via the interpretation that the presence of cysteine at the key amino acid position 90 in the SWS1 opsin confers UV sensitivity. Unless the cornea and the lens efficiently transmit UV to the retina, gulls might in effect be similar to violet-sensitive birds in spectral sensitivity even if they have an ultraviolet sensitive (UVS) SWS1 visual pigment. We report that the spectral transmission of the cornea and lens of great black-backed Larus marinus and herring gulls L. argentatus allow UV-sensitivity, having a λ_T0.5 value, 344 nm, similar to the ocular media of UV sensitive birds. By molecular sequencing of the second α-helical transmembrane region of the SWS1 opsin gene we could also infer that 15 herring gulls and 16 yellow-legged gulls L. michahellis, all base-pair identical, are genetically UV-sensitive.     

Sound improves visual discrimination learning in avian predators

Aposematic insects use warning colours to deter predators, but many also produce odours or sounds when attacked by a predator. One possible role for these additional components is that they promote the association between the warning colour and the non-profitability it signals, thus reducing the chance of future attacks from visually hunting predators. This experiment explicitly tests this idea by looking at the effects of sound on a visual discrimination task. Young domestic chicks were trained to look for food rewards under coloured paper cones scattered in an experimental arena. In a subsequent visual discrimination task, they learned to discriminate between rewarded and non-rewarded hats on the basis of colour. Half the chicks performed this task in silence, whilst the other half had a tone played when they attacked non-rewarded hats. The presence of the tone improved the speed of colour discrimination learning. This demonstrates that there could be a selective advantage for aposematic coloured insects to emit sounds when attacked, since avian predators will learn to avoid their coloration more quickly. The role of psychological interactions between signal components in receivers is discussed in relation to the evolution of multimodal displays.     

Chromosome repatterning in three representative parrots (Psittaciformes) inferred from comparative chromosome painting

Parrots (order: Psittaciformes) are the most common captive birds and have attracted human fascination since ancient times because of their remarkable intelligence and ability to imitate human speech. However, their genome organization, evolution and genomic relation with other birds are poorly understood. Chromosome painting with DNA probes derived from the flow-sorted macrochromosomes (1-10) of chicken (Gallus gallus, GGA) has been used to identify and distinguish the homoeologous chromosomal segments in three species of parrots, i.e., Agapornis roseicollis (peach-faced lovebird); Nymphicus hollandicus (cockatiel) and Melopsittacus undulatus (budgerigar). The ten GGA macrochromosome paints unequivocally recognize 14 to 16 hybridizing regions delineating the conserved chromosomal segments for the respective chicken macrochromosomes in these representative parrot species. The cross-species chromosome painting results show that, unlike in many other avian karyotypes with high homology to chicken chromosomes, dramatic rearrangements of the macrochromosomes have occurred in parrot lineages. Among the larger GGA macrochromosomes (1-5), chromosomes 1 and 4 are conserved on two chromosomes in all three species. However, the hybridization pattern for GGA 4 in A. roseicollis and M. undulatus is in sharp contrast to the most common pattern known from hybridization of chicken macrochromosome 4 in other avian karyotypes. With the exception of A. roseicollis, chicken chromosomes 2, 3 and 5 hybridized either completely or partially to a single chromosome. In contrast, the smaller GGA macrochromosomes 6, 7 and 8 displayed a complex hybridization pattern: two or three of these macrochromosomes were found to be contiguously arranged on a single chromosome in all three parrot species. Overall, the study shows that translocations and fusions in conjunction with intragenomic rearrangements have played a major role in the karyotype evolution of parrots. Our inter-species chromosome painting results unequivocally illustrate the dynamic reshuffling of ancestral chromosomes among the karyotypes of Psittaciformes.     

Rod sensitivity and visual pigment concentration in Xenopus

Xenopus larvae were raised on a vitamin A-free diet under constant illumination until their visual pigment content had decreased to between 8% of normal and an undetectably low level. After the intramuscular injection of 2.1 X 10(13-2.1 X 10(16) molecules of [3H]vitamin A, ocular tissue showed a rapid rate of uptake of label which reached a maximum level of incorporation by 48 h. Light- microscopic autoradiography revealed that the retinal uptake of label was concentrated within the receptor outer segments. Spectral transmissivity measurements at various times after injection were made upon intact retinas and upon digitonin extracts. They showed that visual pigment with a lambdamax of 504 nm was formed in the retina and that the amount formed was a function of incubation time and the magnitude of the dose administered. Electrophysiological measures of photoreceptor light responses were obtained from the PIII component of the electroretinogram, isolated with aspartate. The quantal flux required to elicit a criterion response was determined and related to the fraction of visual pigment present. The results showed that rod sensitivity varied linearly with the probability of quantal absorption.     

Consequences of chronic infections with three different avian malaria lineages on reproductive performance of Lesser Kestrels (Falco naumanni)

We studied the consequences of chronic infections by three different lineages of avian malaria, two Plasmodium (RTSR1, LK6) and one Haemoproteus (LK2), on reproductive performance of Lesser Kestrels (Falco naumanni). Malaria infections in male and female parents had no effect on clutch size, hatching success or nesting success. However, when only successful nests were considered, we found that males parasitized by LK6 raised a lower number of fledglings, suggesting that the level of parental effort by males may be limited by this particular lineage of Plasmodium. This effect was not evident in females, probably due to the higher investment of males during the chick rearing period in this species. Overall, we have found that chronic stages of specific malaria lineages have certain negative consequences on host reproductive performance, highlighting the importance of considering genetic differences among malaria parasites to study their consequences on natural bird populations.     

Palearctic passerines in Afrotropical environments: a review

Previous ecological studies of Palearctic passerine migrants in Africa have claimed to reveal some general features with respect to habitat use, foraging ecology and interspecific relationships with Afrotropical residents. In this review we discuss apparent contradictions between earlier generalisations and more recent results from more detailed field studies and explore in which areas our ecological knowledge and theoretical understanding remain poor and have given rise to misconceptions. For example, it has been claimed that migrants use structurally more diverse and open habitats and that they forage higher and in more peripheral parts of the vegetation than their ecologically similar Afrotropical counterparts, yet in the past these characteristics were often not clearly defined and not always correlated in practice. It has also been stated that migrants are more flexible in habitat use, occupying a wider range of habitat types and employing a higher diversity of foraging techniques, both of which were assumed to be adaptations to permit coexistence with Afrotropical residents by using untapped resources that are only seasonally available. Yet results from studies of the role of competition in shaping migrant-resident communities remain largely unconvincing. While flexibility may facilitate migrant-resident coexistence, it may also favour the evolution of migration because specialists are less able to use their advantages in different environments. We note that definitions of flexibility and specialisation may themselves depend on the ecological or evolutionary approach adopted by researchers. We conclude that few generalisations can safely be made about the ecology of Palearctic migrants in Africa and that adaptive explanations for the behaviours observed are largely lacking, as are studies of the fitness consequences of different migrant strategies such as have been conducted in the Nearctic-Neotropical migration system.     

Extended parental care and delayed dispersal: northern, tropical, and southern passerines compared

Using modern comparative methods, we found that both time toindependence and time with parents were significantly longerin southern hemisphere and tropical birds than in northern hemisphereones. These differences held even after removing Australianpasserines or cooperatively breeding species, and they do notdepend on habitat, diet, or migration pattern. In southern hemisphereand tropical regions, both cooperative breeding and non-cooperativeparents continue to feed their young for a similar length oftime, but cooperative breeders allow them to stay longer intheir natal territory after they become nutritionally independent.Nevertheless, the young of non-cooperative species stay longerwith their parents than do the young of non-cooperative speciesin the temperate northern hemisphere. The fact that extendedperiods of post-fledging parental care are widespread amongpasserines provides further empirical support for the view thatlife histories of southern and tropical birds are ‘slow,’with small clutches, extended parental care, and long lifespan;parents take care of fewer young for longer. These results supportrecent theoretical models that predict that high adult survivaland low turnover of territory owners generally favor natal philopatry.We suggest that the reasons why some species (with or withoutcooperative breeding) exhibit natal philopatry and others donot lie in the balance between productivity and survival ofadults and of retained or dispersing offspring.     

A layered model for visual processing in avian retina

Visual processing in avian retina is interpreted by means of a layered model in which: a) outer layers provide with spatio temporal fast and retarded versions of the stimuli incident on the retina; a possibility is that horizontal cells are involved in isotropically generating the retarded version which is transversally translated; b) prominent specialization of ganglion cells is the result of local non-linear lateral interaction at the inner plexiform layer, mediated by amacrines which return, also isotropically, the translated retarded signals. Small though systematic deviations in the sites of the lateral interaction result in anisotropic but uniform receptive fields for some ganglion cells. A simple though general expressin for the model is derived which includes the various types of recorded avian ganglion retinal cells responses, which also permits a unified interpretation of visual processing in avian and cat's retinae.     

Spectral tuning of avian violet- and ultraviolet-sensitive visual pigments

The violet- and ultraviolet-sensitive visual pigments of birds belong to the same class of pigments as the violet-sensitive (so-called blue) pigments of mammals. However, unlike the pigments from mammals and other vertebrate taxa which, depending on species, have lambda(max) values of either around 430 nm or around 370 nm, avian pigments are found with lambda(max) values spread across this range. In this paper, we present the sequences of two pigments isolated from Humbolt penguin and pigeon with intermediate lambda(max) values of 403 and 409 nm, respectively. By comparing the amino acid sequences of these pigments with the true UV pigments of budgerigar and canary and with chicken violet with a lambda(max) value of 420 nm, we have been able to identify five amino acid sites that show a pattern of substitution between species that is consistent with differences in lambda(max). Each of these substitutions has been introduced into budgerigar cDNA and expressed in vitro in COS-7 cells. Only three resulted in spectral shifts in the regenerated pigment; two had relatively small effects and may account for the spectral shifts between penguin, pigeon, and chicken whereas one, the replacement of Ser by Cys at site 90 in the UV pigments, produced a 35 nm shortwave shift that could account for the spectral shift from 403 nm in penguin to around 370 nm in budgerigar and canary.