burnr: Fire history analysis and graphics in R

We developed a new software package, burnr, for fire history analysis and plotting in the R statistical programming environment. It was developed for tree-ring fire-scar analysis, but is broadly applicable to other event analyses (e.g., avalanches, frost rings, or culturally modified trees). Our new package can read, write, and manipulate standard tree-ring fire history FHX files, produce fire—demography charts, calculate fire frequency and seasonality statistics, and run superposed epoch analysis (SEA). A key benefit of burnr is that it enables automation of analyses and plotting, especially for large data sets. The package also facilitates creative plotting, mapping, and analyses when combined with the thousands of packages available in R. In this paper, we describe the basic functionality of burnr and introduce users to fire history analyses in R.     

Dating fire events in Pinus heldreichii forests by analysis of tree ring cores

Bosnian pine (Pinus heldreichii Christ, also known as Pinus leucodermis Antoine) is a relict species found in isolated locations in the mountains of the Balkan Peninsula and Southern Italy. The forests are of high conservational value because they are extremely rich in rare and endemic species of plants and fungi. Yet, the natural history and disturbance regime of P. heldreichii ecosystems is not well understood. Fire traces show that fires played a major role, but there is very limited historical data. Therefore proxy methods to reconstruct past events have to be used. The analysis of tree rings provides such an opportunity. To our knowledge, there have been no attempts to use tree ring cores from P. heldreichii trees to date fire events. Our aim was therefore to test if tree ring cores collected with an increment borer could successfully be used to date fires and verify other tree ring indicators caused by the fire events. We tested an approach that was based on extracting multiple cores from fire-scarred trees and nearby standing trees without injuries. A total of 136 cores from 99 trees were collected from which we dated all 34 cores with fire scars. We found the exact fire years for 29 of the samples, and the remaining 5 samples were approximately dated. Up to 83% of all sampled trees had additional growth reactions, mostly suppressions lasting 5–10 years after the fire years.     

Patch and landscape features drive fire regime in a Brazilian flammable ecosystem

The flammable ecosystems are evolutionary dependent on the periodic action of fire. Several environmental factors, both at local and landscape scales, can affect fire regimes in these ecosystems differently. Here, we evaluated the influence of local and landscape features on two parameters of the fire regime of a flammable protected area of the Brazilian savanna: The Chapada Diamantina National Park. We characterized both fire frequency and the time since the last fire, from 1990 to 2019 and measured five environmental predictors (tree canopy cover, altitude, water surface, predominant land use and distance to the nearest municipality). We used Generalized Additive Models for Location, Scale and Shape (GAMLSS) to assess the influence of environmental predictors on the measured fire regime parameters. We found a large interannual variation in the total annual area burned in the studied period. In total, 68 % of the protected area (1030 km²) was burned at least once and 32 % (486 km²) was unaffected by fires during the study period. Predominant land use, distance to the nearest municipality, tree cover and the interaction between tree cover and altitude were negatively related to fire frequency, while the water surface and altitude positively influenced fire frequency in the park. Compared to older fires, recent fires occurred in landscapes at lower altitudes and with lower tree cover. Our results demonstrate that the fire frequency and time since the last fire were highly variable across the park, reflecting the strong influence of landscape heterogeneity on their parameters.     

Impact of fire on Picea mariana and Pinus banksiana seedlings in subarctic lichen woodlands

Abstract. The demography of Picea mariana (black spruce) and Pinus banksiana (jack pine) seedlings was monitored through five censuses over 13 months in four different seed bed types after fire of four severity levels in lichen woodland. Most seeds germinated just before early frost in late summer 1990 or immediately after snow thaw in early spring 1991; the germination rate subsequently decreased. For both species, germination rate decreased along a gradient of fire severity. The proportion of Pinus seeds that produced a seedling surviving 13 months after sowing was 4.3 % and 0.4 % respectively in the intact lichen mat and in the mineral soil seed bed type. For Picea these values are 3.2 % and 0.2 % respectively. The low germination rate in a severely burned seed bed type appeared to be associated with the formation of a water-repellent crust at the soil surface following the fire. Seedlings were contagiously distributed and were more frequent in flat and hollow microsites, where there is probably more water available than on bumps or among pebbles. Properties of experimentally burned seed bed types may differ from those under natural fires where regeneration by seed generally occurs following dispersal. However, the high germination rate observed in the intact lichen mat suggests that scattered lichen woodland patches may respond to increased seed input by a higher frequency of seedling establishment.     

Dendrochronological analysis of Sequoia sempervirens in an interior old-growth forest

Dendrochronological studies of large and old Sequoia sempervirens are limited by access and complex crossdating, but core sampling at regular height intervals along the main trunks of five standing trees allowed for reconstruction of growth, height, and age while providing within-tree replication for crossdating. We developed a crossdated ring-width chronology (1453–2015) for redwoods growing in an easternmost old-growth forest in the Napa Range of California, determined aboveground tree attributes, investigated the inter-annual climate-growth relationships since the late 19th century, and documented long-term growth trends. Age, height, f-DBH (functional diameter at breast height), and aboveground biomass of these co-dominant trees ranged from 241 to 783 years, 45.7 to 61.5 m, 117.0 to 226.9 cm, and 9.34 to 33.62 Mg, respectively. Bootstrapped correlation and response function analysis showed radial growth positively related to May through August Palmer Drought Severity Index (PDSI) and negatively related to maximum June temperature (r ≥ │0.47│, P < 0.0001), explaining 33.3% of ring-width variation. Bootstrapped correlations over a moving 40-year window indicated strengthening relationships with PDSI and minimum temperature. The long-term growth trend, reflected by the size-detrended metric of residual wood volume increment (RWVI), varied over time and showed an average one-year decrease of 13.3% for 20th and 21st century droughts. A fire detected in August 1931 corresponded with a one-year decrease in RWVI of 43.1% followed by >100% increase within five years. Growth dynamics for redwoods in this interior forest provide a point of comparison for redwoods previously studied in old-growth forests along the latitudinal gradient, highlighting range-wide trends and site-specific differences in responses to climate and fire.     

Reactions of the fauna on the bark of trees to the frequency of fires in a North American savanna

Summary The arthropod communities living on the bark of the oak species Quercus macrocarpa and Q. ellipsoidalis were investigated in a North American oak savanna. Differences were found in the community structure of the arthropods living on the bark of these two tree species, although they have the same fissured bark type. In the North American oak savanna ecosystem the most important disturbance factor is fire, which maintains species richness. Highest numbers of species and specimens were found at moderately disturbed sites. Three main ecological groups of arthropods living on the bark of trees can be distinguished in relation to the degree of disturbance: (1) Inhabitants of bark of trees restricted to undisturbed sites: they do not occur in fire-disturbed areas; (2) Inhabitants of bark of trees adapted to a moderate degree of disturbance: many species occur in high numbers only in moderately disturbed areas; and (3) Specialist inhabitants of bark of trees in heavily disturbed areas. The number of specimens of these species increases per trunk with the frequency of disturbance.     

Fire-scars and polymodal age-structure provide evidence of fire-events in an Aleppo pine population in southern France

Aleppo pine (Pinus halepensis Mill.) is adapted to fire, the most important disturbance in Mediterranean ecosystems. This species is known to be sensitive to fire and is usually killed when burned, but has a powerful regenerative capacity following burning. Sometimes, however, pines survive within burned areas, suggesting a certain potential for recording fire events in terms of age-structure and eventually scars. In the present study, fire scars on Aleppo pine trunks were used to construct a 150-year fire record in a burned forest in southern France. Four fires were detected with a mean fire return interval of 27 years: minimum 13 years and maximum 45 years. The age structure of the Aleppo pine population was analyzed on the basis of dated fire-scars in order to test the role of fire in creating the polymodal structure of the pine population. Results show the presence of multiple “cohorts” (subpopulations) of Aleppo pine. There appear to have been several pulses of tree recruitment, with the two largest cohorts corresponding to regeneration after the 1919 and 2000 fires. Other fires were recognized based on fire scars but these were not associated with obvious post-fire pine recruitment. Regeneration success is likely to depend on fire severity and on the length of fire-free intervals. Fire history and associated age-structure can thus be reconstructed using Aleppo pine stands.     

Fire history of a prairie/forest boundary: more than 250 years of frequent fire in a North American tallgrass prairie

Questions: Most modern fire‐prone landscapes have experienced disruptions of their historic fire regimes. Are the primary tallgrass prairies of the Flint Hills reflective of a history of continuous fire occurrence? Did fire frequency, severity, size and seasonality change in connection with changes in land use? Has fire occurrence been related to drought conditions? Location: Edges of Cross Timbers forest stands at the Tallgrass Prairie Preserve (TGPP) in the Flint Hills of Osage County, Oklahoma, USA. Methods: Cross‐sections of 76 Quercus stellata were collected from Cross Timbers stands at or near the grassland edge in the TGPP. Dendrochronological methods were used to identify years of formation for tree rings and fire scars. Superposed epoch analysis was used to evaluate the effect of drought conditions on fire occurrence. Results: Fires were recorded in 46.6% of the years between 1729 and 2005. In 41 cross‐sections at one site, the mean fire interval between 1759 and 2003 was 2.59 years, with fire interval decreasing from a mean fire interval of 3.76 years in the early part of the record to 2.13 years in modern times. No extended periods without fire were recorded in the study area. Drought conditions had no significant effect on fire occurrence. Conclusions: In contrast with many fire‐prone landscapes worldwide, the prairies of the Flint Hills have experienced no recent fire suppression or exclusion. Changes in fire frequency mark transitions in land use, primarily from being traditionally used by Native Americans to being managed for cattle production.     

Interpreting woody cover data in tropical and subtropical areas: Comparison between the equilibrium and the non-equilibrium assumption

We compared two basic assumptions about the woody cover distribution in tropical and subtropical areas: the equilibrium (woody cover always reaches a long-term steady state) vs the non-equilibrium assumption (woody cover fluctuates in response to fire disturbances). We considered two models each one representative of one of the two assumptions: an equilibrium and a non-equilibrium model. The equilibrium model considered fire as an a priori determined parameter, whereas the non-equilibrium model assumed fires as stochastic events whose probability increased with grass density. We compared the results of the models with large datasets containing woody cover values sampled at the continental and at the global scale. In particular, we focused on two evidences shown by data. The first evidence is that woody cover is limited by water scarcity for low rainfall values and by fire for high rainfall values (arid–moist savanna distinction). The second evidence is the bimodality of woody cover data observed for high rainfall values. The equilibrium model gave a static interpretation of the data. The non-equilibrium model, instead, gave a more general interpretation of the data. In particular, the non-equilibrium model detected the arid–moist savanna distinction as emergent along a rainfall gradient and demonstrated that the bimodality observed in the woody cover data could be obtained in the woody cover values exhibited by a vegetation system in different times. Thus, woody cover data do not necessarily represent steady states. Rather, they could represent snapshots of a vegetation system in certain time instants.     

Temporal and spatial patterns in fire occurrence during the establishment of mixed‐oak forests in eastern North America

Question: What was the role of fire during the establishment of the current overstory (ca. 1870–1940) in mixed‐oak forests of eastern North America? Location: Nine sites representing a 240‐km latitudinal gradient on the Allegheny and Cumberland Plateaus of eastern North America. Methods: Basal cross‐sections were collected from 225 trees. Samples were surfaced, and fire scars were dated. Fire history diagrams were constructed and fire return intervals were calculated for each site. Geographic patterns of fire occurrence, and fire‐climate relationships were assessed. Results: Fire was a frequent and widespread occurrence during the formation of mixed‐oak forests, which initiated after large‐scale land clearing in the region ca. 1870. Fire return ranged from 1.7 to 11.1 years during a period of frequent burning from 1875 to 1936. Fires were widespread during this period, sometimes occurring across the study region in the same year. Fires occurred in a variety of climate conditions, including both drought and non‐drought years. Fires were rare from 1936 to the present. Conclusions: A variety of fire regime characteristics were discerned. First, a period of frequent fire lasted approximately 60 years during the establishment of the current oak overstory. Second, fire occurred during a variety of climate conditions, including wet climates and extreme drought. Finally, there was within‐site temporal variability in fire occurrence. These reference conditions could be mimicked in ongoing oak restoration activities, improving the likelihood of restoration success.     

Tree dieback and regeneration in secondary Acacia zanzibarica woodlands on an abandoned cattle ranch in coastal Tanzania

Questions: Bush encroachment is a major problem when African savanna ecosystems are used for cattle ranching. How do secondary woodlands develop after ranching is abandoned? What are the patterns and rates of tree mortality and regeneration? Location: Mkwaja Ranch (now part of Saadani National Park) in coastal Tanzania. Methods: Ninety‐seven circular plots (4‐m radius) were set in secondary Acacia zanzibarica woodland along a gradient of tree density. Variables relating to tree and grass layers and soil characteristics of plots were recorded. Seedlings were counted twice in the wet seasons, and resprouts once. Tree flowering and pod production were assessed during the fruiting season, while survival of trees initially present was recorded after 12 and 32 months. Interrelationships among variables were investigated using multiple linear regression, binary logistic regression and mixed effects models. Results: After 32 months, over one‐third of trees in plots had died. Most died after fire, especially on heavy soils, and mortality was significantly related to the tree live biomass ratio and soil conditions. Seed production was very low, especially in denser stands. Numbers of seedlings correlated with soil and grass variables but not with seed rain. Half of trees killed above‐ground produced coppice shoots from the base; in contrast, root suckering was independent of topkill. By the end of the study, no seedlings survived and no resprouts emerged above the grass layer. Conclusions: A. zanzibarica woodlands at Mkwaja Ranch were able to develop because of ranching, and can only persist under intensive grazing. The woodlands do not represent a successional stage towards forest and will probably revert to predominantly grassland vegetation within 10–20 years unless grazing pressure from wild ungulates increases considerably and/or fire regimes change.     

Tree growth in an African woodland savanna affected by disturbance

Questions: How does tree growth in a tropical woodland savanna vary as a function of size, and how is it affected by competition from neighbours, site attributes, and damage caused by disturbance? Location: western Zimbabwe. Methods: Trees of common species were tagged, mapped, and measured annually between 2001 and 2003 in a Kalahari sand woodland savanna. Diameter increments were analysed with mixed model regressions for the largest ramet in each genet. Stem diameter and damage, soil texture, and indices of competition at multiple spatial scales were used as covariates. Results: Stem diameter increased initially and then declined as a function of size in undamaged trees, which grew faster than damaged trees. Growth in damaged trees declined with size. No site differences were detected, and there was evidence for between‐tree competition on growth only in the fastest‐growing species, Brachystegia spiciformis. In several species the growth rate of the largest ramet increased as a function of the basal area of secondary ramets, contrary to expectations. For many species, the growth models showed poor explanatory power. Conclusions: Growth in Kalahari sand savanna trees varies as a function of size and changes in tree architecture caused by disturbance agents such as fire, frost, and elephant browsing. Disturbance may thus play an important role on vegetation dynamics through its effects on growth in the post‐disturbance phase. Growth is highly stochastic for some species in this system, and more deterministic in others. It is hypothesized that this dichotomy may be driven by differences in rooting depth among species.     

Fire history of Pinus nigra in Western Anatolia: A first dendrochronological study

Forests in the Mediterranean basin frequently experience fires due to both anthropogenic and natural causes. There are concerns that the fire season will prolong in the Mediterranean basin, the fire frequency will increase with ongoing climate change, moreover, the fire regimes will shift from surface fires to local crown fires. Here, we aim to improve our understanding of the fire regime components of black pine forests in Turkey by 1) reconstructing a high-resolution fire chronology based on tree rings, 2) revealing the seasonality of fires, 3) investigating the relationship between fire and climate, and 4) comparing our reconstruction results with documentary data from forest management units. We collected 62 fire-scarred trees from three sites in Kütahya and developed a 368 year-long (1652–2019) composite fire chronology using dendrochronological methods. We found that at two sites major fire years coincided with dry years. Two major fire years (1853 and 1879) were common to all sites and two additional fire years (1822 and 1894) were found at two sites. Our results show a sharp decline in fire frequency after the beginning of the 20th century at all sites that can be attributed to increased fire suppression efforts and forest management activities in the 20th century. Our results suggest that the spread of fires has been actively suppressed since the first forest protection law in Turkey. Yet, tree-ring based and documentary data corroboration shows that seasonality did not change over the past +350 years.     

Three centuries of fire in montane pine‐oak stands on a temperate forest landscape

Question: What was the role of fire in montane pine‐oak (Pinus‐Quercus) stands under changing human land uses on a temperate forest landscape in eastern North America? Location: Mill Mountain in the central Appalachian Mountains, Virginia, US. Methods: A dendroecological reconstruction of fire history was generated for four stands dominated by xerophytic pine and oak species. The fire chronology began under presettlement conditions following aboriginal depopulation. Subsequent land uses included European settlement, iron mining, logging, and US Forest Service acquisition and fire protection. Results: Fires occurred approximately every 5 years until 1930 without any evidence of a temporal trend in fire frequency. Burning ceased after 1930. Area‐wide fires affecting multiple pine stands were common, occurring at intervals of approximately 16 years. Most living pines became established during the late 1800s and early 1900s. Dead pines indicated that an older cohort established ca. 1730. Most hardwoods were established between the 1920s and 1940s. Conclusions: Except for fire protection, changes in land use had no discernible influence on fire frequency. Lightning ignitions and/or large fire extent may have been important for maintaining frequent burning in the 1700s, while fuel recovery may have constrained fire frequency during later periods. The disturbance regime appears to be characterized by frequent surface fires and occasional severe fires, insect outbreaks or other disturbances followed by pine recruitment episodes. Industrial disturbances appear to have had little influence on the pine stands. The greatest impact of industrial society is fire exclusion, which permitted hardwood establishment.     

Fire season affects size and architecture of Colophospermum mopane in southern African savannas

Wildfires may be started naturally by lightning or artificially by humans. In the savanna regions of southern Africa, lightning fires tend to occur at the start of the wet season, during October and November, while anthropogenic fires are usually started during the dry season, between July and August. A long-term field manipulation experiment initiated in the Kruger National Park in 1952 was used to explore whether this seasonal divergence affects tree abundance, spatial pattern, size and architecture. After 44 years of prescribed burning treatments that simulated the seasonal incidence of lightning and anthropogenic fires, mean densities of the locally-dominant shrub, Colophospermum mopane, were 638 and 500 trees ha^–1 respectively. Trees in burnt plots had aggregated distributions while trees in unburnt plots had random distributions. Significant differences (p < 0.001) were recorded in a range of morphological parameters including tree height, canopy diameter, mean stem circumference and number of stems. The incidence of resprouting also differed significantly between treatments, with burnt trees containing a high proportion of coppiced stems. The differences in tree size and architecture between the mid-dry season and early-wet season burning plots suggest that anthropogenic fires applied during July and August cannot substitute for a natural lightning fire regime. Anthropogenic fire yields a landscape that is shorter, more scrubby and populated by numerous coppiced shrubs than the landscape generated by natural lightning fire conditions.     

澳大利亚森林火灾的管理与火生态的研究

澳大利亚是火灾频发的地区．每年因森林火灾的危害都要造成相当的社会、经济损失及生态环境的破坏,故火生态的研究及火的管理在澳大利亚的生态学研究中一直占有重要地位．本文主要讨论了澳洲森林大火起燃的物理过程和机制、可燃物的特征、林火的特点、习性及对生态环境的影响和如何控制和减少火灾的危害性,达到对火进行利用、控制和管理的目的．     

The role of anthropogenic influences in a mixed-conifer forest mortality episode

Abstract. Anthropogenic influences on recent tree mortality in mid-montane mixed conifer forests of southern California, USA, and northern Baja California, Mexico, were investigated. The Pinus jeffreyi-Abies concolor phase of the mixed-conifer montane community was sampled at three sites, characterized by: (1) low levels of air pollution and long-term fire suppression (Holcomb Valley in the San Bernardino Mountains, California); (2) chronic, severe air pollution and long-term fire suppression (Barton Flats in the San Bernardino Mountains, California); and (3) little air pollution and no fire suppression (La Corona Arriba in the Sierra San Pedro Martir in Baja California, Mexico). Similar percentages of dead standing trees, around 14 %, were found at both San Bernardino sites, but a comparatively low level, 4 %, was found in the Mexican forest. Anthropogenic effects, in particular fire suppression, may play an important role in enhancing the impact of natural stresses on the dynamics of mixed conifer forests.