Multichannel automated chamber system for continuous monitoring of CO2 exchange between the agro-ecosystem or soil and the atmosphere

A multichannel automated chamber system was developed for continuous monitoring of CO₂ exchange at multiple points between agro-ecosystem or soil and atmosphere. This system consisted of an automated chamber subsystem with a CO₂ concentration analyzer and a data logging subsystem. Both subsystems were under the control of a programmable logic controller (PLC). The automated chamber subsystem contained 18 chambers (50 cm × 50 cm × 50 cm) and a compressor. The chamber lids were closed and can be automatically opened. During measurement, one of the 18 chambers was kept closed for three minutes for measuring and the other chambers were kept open to maintain the natural soil conditions to the maximum extent. Environmental variables were simultaneously measured using sensors and recorded by the data logger. The reliability of the multichannel automated chamber system was tested and the results showed that the turbulence of the fans had no significant effect on the CO₂ exchange. The changes in the air and the temperature of soil and soil moisture inside the chambers, caused by the enclosure of the chambers, were not significant. The net ecosystem CO₂ exchange for the wheat ecosystem was ?2.35 μmol·m^?2·s^>?1 and the soil respiration was 3.87 μmol·m^?2·s^>?1 in the wheat field, and 6.61 μmol·m^?2·s^>?1 in the apple orchard.     

用于测定陆地生态系统与大气间CO2交换通量的多通道全自动通量箱系统

陆地生态系统与大气间CO2交换是全球碳循环的最重要组成部分,科学地测定其CO2交换通量一直是陆地生态系统碳循环研究的核心工作之一。提高观测的效率和减少观测对自然的干扰,是科学精确地估算区域和全球尺度上的陆地生态系统与大气间CO2交换量的关键。在参考国内外已有的陆地生态系统与大气间CO2交换通量箱式法观测技术的基础上,发展了一套多通道全自动通量箱系统用来连续观测陆地生态系统或土壤与大气间的CO2交换通量。在黄土高原中国科学院长武农业生态试验站的麦田和苹果园中进行了系统测试,结果表明,该系统不但能够实现自动、连续、多点观测,而且对自然环境的影响比较小,在田间的实验观测中,该系统运行稳定,能够比较客观地得到陆地生态系统与大气间的CO2交换通量。     

Novel technique for component monitoring of CO2 exchange in plants

A novel technique designed for component monitoring of CO₂ exchange in plants is described. The system is based on application of self-clamping leaf chambers connected to an open gas-exchange measuring system and on automatic recording of CO₂ concentration. This technique was implemented in a commercially available instrument, PTM-48A Photosynthesis Monitor, which provides for long-term measurements of gas exchange and for discrimination of its separate components. Furthermore, many other plant functions can be monitored during plant growth and development under laboratory, greenhouse, and field conditions.     

Distinct responses of soil microbial communities to elevated CO2 and O3 in a soybean agro-ecosystem

The concentrations of atmospheric carbon dioxide (CO₂) and tropospheric ozone (O₃) have been rising due to human activities. However, little is known about how such increases influence soil microbial communities. We hypothesized that elevated CO₂ (eCO₂) and elevated O₃ (eO₃) would significantly affect the functional composition, structure and metabolic potential of soil microbial communities, and that various functional groups would respond to such atmospheric changes differentially. To test these hypotheses, we analyzed 96 soil samples from a soybean free-air CO₂ enrichment (SoyFACE) experimental site using a comprehensive functional gene microarray (GeoChip 3.0). The results showed the overall functional composition and structure of soil microbial communities shifted under eCO₂, eO₃ or eCO₂+eO₃. Key functional genes involved in carbon fixation and degradation, nitrogen fixation, denitrification and methane metabolism were stimulated under eCO₂, whereas those involved in N fixation, denitrification and N mineralization were suppressed under eO₃, resulting in the fact that the abundance of some eO₃-supressed genes was promoted to ambient, or eCO₂-induced levels by the interaction of eCO₂+eO₃. Such effects appeared distinct for each treatment and significantly correlated with soil properties and soybean yield. Overall, our analysis suggests possible mechanisms of microbial responses to global atmospheric change factors through the stimulation of C and N cycling by eCO₂, the inhibition of N functional processes by eO₃ and the interaction by eCO₂ and eO₃. This study provides new insights into our understanding of microbial functional processes in response to global atmospheric change in soybean agro-ecosystems.     

Open top chambers for exposing plant canopies to elevated CO2 concentration and for measuring net gas exchange

Open top chamber design and function are reviewed. All of the chambers described maintain CO₂ concentrations measured at a central location within ±30 ppm of a desired target when averaged over the growing season, but the spatial and temporal range within any chamber may be closer to 100 ppm. Compared with unchambered companion plots, open top chambers modify the microenvironment in the following ways: temperatures are increased up to 3°C depending on the chamber design and location of the measurement; light intensity is typically diminished by as much as 20%; wind velocity is lower and constant; and relative humidity is higher. The chamber environment may significantly alter plant growth when compared with unchambered controls, but the chamber effect on growth has not been clearly attributed to a single or even a few environmental factors.A method for modifying an open top chamber for tracking gas exchange between natural vegetation and the ambient air is described. This modification consists of the addition of a top with exit chimney to reduce dilution of chamber CO₂ by external ambient air, is quickly made and permits estimation of the effects of elevated CO₂ and water vapor exchange.The relatively simple design and construction of open top chambers make them the most likely method to be used in the near future for long-term elevated CO₂ exposure of small trees, crops and grassland ecosystems. Improvements in the basic geometry to improve control of temperature, reduce the variation of CO₂ concentrations, and increase the turbulence and wind speed in the canopy boundary layer are desirable objectives. Similarly, modifications for measuring water vapor and carbon dioxide gas exchange will extend the usefulness of open top chambers to include non-destructive monitoring of the responses of ecosystems to rising atmospheric CO₂.     

Daily and seasonal CO2 exchange in Scots pine grown under elevated O3 and CO2: experiment and simulation

Starting in early spring of 1994, naturally regenerated, 30-year-old Scots pine (Pinus sylvestris L.) trees were grown in open-top chambers and exposed in situ to doubled ambient O₃,doubled ambient CO₂ and a combination of O₃ and CO₂ from 15 April to 15 September. To investigate daily and seasonal responses of CO₂ exchange to elevated O₃ and CO₂, the CO₂ exchange of shoots was measured continuously by an automatic system for measuring gas exchange during the course of one year (from 1 Januray to 31 December 1996). A process-based model of shoot photosynthesis was constructed to quantify modifications in the intrinsic capacity of photosynthesis and stomatal conductance by simulating the daily CO₂ exchange data from the field. Results showed that on most days of the year the model simulated well the daily course of shoot photosynthesis. Elevated O₃ significantly decreased photosynthetic capacity and stomatal conductance during the whole photosynthetic period. Elevated O₃ also led to a delay in onset of photosynthetic recovery in early spring and an increase in the sensitivity of photosynthesis to environmental stress conditions. The combination of elevated O₃ and CO₂ had an effect on photosynthesis and stomatal conductance similar to that of elevated O₃ alone, but significantly reduced the O₃-induced depression of photosynthesis. Elevated CO₂ significantly increased the photosynthetic capacity of Scots pine during the main growing season but slightly decreased it in early spring and late autumn. The model calculation showed that, compared to the control treatment, elevated O₃ alone and the combination of elevated O₃ and CO₂ decreased the annual total of net photosynthesis per unit leaf area by 55% and 38%, respectively. Elevated CO₂ increased the annual total of net photosynthesis by 13%.     

Leaf cavity CO2 concentrations and CO2 exchange in onion,Allium cepa L.

Onion (Allium cepa L.) plants were examined to determine the photosynthetic role of CO₂ that accumulates within their leaf cavities. Leaf cavity CO₂ concentrations ranged from 2250 L L^–1 near the leaf base to below atmospheric (<350 L L^–1) near the leaf tip at midday. There was a daily fluctuation in the leaf cavity CO₂ concentrations with minimum values near midday and maximum values at night. Conductance to CO₂ from the leaf cavity ranged from 24 to 202 mol m^–2 s^–1 and was even lower for membranes of bulb scales. The capacity for onion leaves to recycle leaf cavity CO₂ was poor, only 0.2 to 2.2% of leaf photosynthesis based either on measured CO₂ concentrations and conductance values or as measured directly by ¹⁴CO₂ labeling experiments. The photosynthetic responses to CO₂ and O₂ were measured to determine whether onion leaves exhibited a typical C₃-type response. A linear increase in CO₂ uptake was observed in intact leaves up to 315 L L^–1 of external CO₂ and, at this external CO₂ concentration, uptake was inhibited 35.4±0.9% by 210 mL L^–1 O₂ compared to 20 mL L^–1 O₂. Scanning electron micrographs of the leaf cavity wall revealed degenerated tissue covered by a membrane. Onion leaf cavity membranes apparently are highly impermeable to CO₂ and greatly restrict the refixation of leaf cavity CO₂ by photosynthetic tissue.Abbreviations C_a external CO₂ concentration - C_i intercellular CO₂ concentration - CO₂ compensation concentration - PPFR photosynthetic photon fluence rate     

Modelling the CO2 gas exchange of grassland vegetation from experimental data

Pseudo-cubic spline functions were applied to the two atmospheric CO₂ concentrations of 340 and 600 l·l^–1 CO₂ for describing the average daily CO₂ gas exchange rates of simplifed grassland model ecosystems. Measurements used were from daily means of photon flux density (PhAR), temperature and relative air humidity, phytomass of each day, leaf area indexes, average phenological states of the vegetation (1–15), and water exchange rates of the entire model ecosystems. The functions were validated with, data from the same experimental year. We also succeeded in verifying the functions with the response data from years other than those used for constructing the model.     

Automatic gas tank switching system for CO2 incubators

Summary The use and construction of an automatic gas tank switching system are described. This device monitors the gas pressure in a CO₂ incubator gas system and automatically switches to a reserve tank when the main supply tank is depleted. The unit contains an alarm system that signals either a loss of power or of gas pressure in the supply system. This research was supported by National Cancer Institute Contract No 1-CP-33226, grants CA 13058 and CA 14680 and an institutional grant to the Michigan Cancer Foundation by the United Foundation of Greater Detroit.     

Acclimation of photosynthesis to increasing atmospheric CO2: The gas exchange perspective

The nature of photosynthetic acclimation to elevated CO₂ is evaluated from the results of over 40 studies focusing on the effect of long-term CO₂ enrichment on the short-term response of photosynthesis to intercellular CO₂ (the A/C_i response). The effect of CO₂ enrichment on the A/C_i response was dependent on growth conditions, with plants grown in small pots (< 5 L) or low nutrients usually exhibiting a reduction of A at a given C_i, while plants grown without nutrient deficiency in large pots or in the field tended to exhibit either little reduction or an enhancement of A at a given C_i following a doubling or tripling of atmospheric CO₂ during growth. Using theoretical interpretations of A/C_i curves to assess acclimation, it was found that when pot size or nutrient deficiency was not a factor, changes in the shape of A/C_i curves which are indicative of a reallocation of resources within the photosynthetic apparatus typically were not observed. Long-term CO₂ enrichment usually had little effect or increased the value of A at all C_i. However, a minority of species grown at elevated CO₂ exhibited gas exchange responses indicative of a reduced amount of Rubisco and an enhanced capacity to metabolize photosynthetic products. This type of response was considered beneficial because it enhanced both photosynthetic capacity at high CO₂ and reduced resource investment in excessive Rubisco capacity. The ratio of intercellular to ambient CO₂ (the C_i/C_a ratio) was used to evaluate stomatal acclimation. Except under water and humidity stress, C_i/C_a exhibited no consistent change in a variety of C₃ species, indicating no stomatal acclimation. Under drought or humidity stress, C_i/C_a declined in high-CO₂ grown plants, indicating stomata will become more conservative during stress episodes in future high CO₂ environments.Abbreviations A net CO₂ assimilation rate - C_i (C_a) intercellular (ambient) partial pressure of CO₂ - operational C_i intercellular partial pressure of CO₂ at a given ambient partial pressure of CO₂ - g_s stomatal conductance - normal CO₂ current atmospheric mole fraction of CO₂ (330 to 355 mol mol^–1) - Rubisco ribulose-1,5-bisphosphate carboxylase/oxygenase     

Land plants equilibrate O2 and CO2 concentrations in the atmosphere

The role of land plants in establishing our present day atmosphere is analysed. Before the evolution of land plants, photosynthesis by marine and fresh water organisms was not intensive enough to deplete CO₂ from the atmosphere, the concentration of which was more than the order of magnitude higher than present. With the appearance of land plants, the exudation of organic acids by roots, following respiratory and photorespiratory metabolism, led to phosphate weathering from rocks thus increasing aquatic productivity. Weathering also replaced silicates by carbonates, thus decreasing the atmospheric CO₂ concentration. As a result of both intensive photosynthesis and weathering, CO₂ was depleted from the atmosphere down to low values approaching the compensation point of land plants. During the same time period, the atmospheric O₂ concentration increased to maximum levels about 300 million years ago (Permo-Carboniferous boundary), establishing an O₂/CO₂ ratio above 1000. At this point, land plant productivity and weathering strongly decreased, exerting negative feedback on aquatic productivity. Increased CO₂ concentrations were triggered by asteroid impacts and volcanic activity and in the Mesozoic era could be related to the gymnosperm flora with lower metabolic and weathering rates. A high O₂/CO₂ ratio is metabolically linked to the formation of citrate and oxalate, the main factors causing weathering, and to the production of reactive oxygen species, which triggered mutations and stimulated the evolution of land plants. The development of angiosperms resulted in a decrease in CO₂ concentration during the Cenozoic era, which finally led to the glacial-interglacial oscillations in the Pleistocene epoch. Photorespiration, the rate of which is directly related to the O₂/CO₂ ratio, due to the dual function of Rubisco, may be an important mechanism in maintaining the limits of O₂ and CO₂ concentrations by restricting land plant productivity and weathering.     

Effect of elevated atmospheric CO2 concentration on soil and root respiration in winter wheat by using a respiration partitioning chamber

Soil respiration in a cropland is the sum of heterotrophic (mainly microorganisms) and autotrophic (root) respiration. The contribution of both these types to soil respiration needs to be understood to evaluate the effects of environmental change on soil carbon cycling and sequestration. In this paper, the effects of free-air CO₂ enrichment (FACE) on hetero- and autotrophic respiration in a wheat field were differentiated and evaluated by a novel split-root growth and gas collection system. Elevated atmospheric pCO₂ of approximately 200 μmol mol⁻¹ above the ambient pCO₂ significantly increased soil respiration by 15.1 and 14.8% at high nitrogen (HN) and low nitrogen (LN) application rates, respectively. The effect of elevated atmospheric pCO₂ on root respiration was not consistent across the wheat growth stages. Elevated pCO₂ significantly increased and decreased root respiration at the booting-heading stage (middle stage) and the late-filling stage (late stage), respectively, in HN and LN treatments; however, no significant effect was found at the jointing stage (early stage). Thus, the effect of increased pCO₂ on cumulative root respiration for the entire wheat growing season was not significant. Cumulative root respiration accounted for approximately 25–30% of cumulative soil respiration in the entire wheat growing season. Consequently, cumulative microbial respiration (soil respiration minus root respiration) increased by 22.5 and 21.1% due to elevated pCO₂ in HN and LN, respectively. High nitrogen application significantly increased root respiration at the late stage under both elevated pCO₂ and ambient pCO₂; however, no significant effects were found on cumulative soil respiration, root respiration, and microbial respiration. These findings suggest that heterotrophic respiration, which is influenced by increased substrate supplies from the plant to the soil, is the key process to determine C emission from agro-ecosystems with regard to future scenarios of enriched pCO₂.     

Non-phototrophic CO 2 fixation by soil microorganisms

Although soils are generally known to be a net source of CO₂ due to microbial respiration, CO₂ fixation may also be an important process. The non-phototrophic fixation of CO₂ was investigated in a tracer experiment with ¹⁴CO₂ in order to obtain information about the extent and the mechanisms of this process. Soils were incubated for up to 91 days in the dark. In three independent incubation experiments, a significant transfer of radioactivity from ¹⁴CO₂ to soil organic matter was observed. The process was related to microbial activity and could be enhanced by the addition of readily available substrates such as acetate. CO₂ fixation exhibited biphasic kinetics and was linearly related to respiration during the first phase of incubation (about 20–40 days). The fixation amounted to 3–5% of the net respiration. After this phase, the CO₂ fixation decreased to 1–2% of the respiration. The amount of carbon fixed by an agricultural soil corresponded to 0.05% of the organic carbon present in the soil at the beginning of the experiment, and virtually all of the fixed CO₂ was converted to organic compounds. Many autotrophic and heterotrophic biochemical processes result in the fixation of CO₂. However, the enhancement of the fixation by addition of readily available substrates and the linear correlation with respiration suggested that the process is mainly driven by aerobic heterotrophic microorganisms. We conclude that heterotrophic CO₂ fixation represents a significant factor of microbial activity in soils.     

Above- and belowground response of Populus grandidentata to elevated atmospheric CO2 and soil N availability

Soil N availability may play an important role in regulating the long-term responses of plants to rising atmospheric CO₂ partial pressure. To further examine the linkage between above- and belowground C and N cycles at elevated CO₂, we grew clonally propagated cuttings of Populus grandidentata in the field at ambient and twice ambient CO₂ in open bottom root boxes filled with organic matter poor native soil. Nitrogen was added to all root boxes at a rate equivalent to net N mineralization in local dry oak forests. Nitrogen added during August was enriched with ¹⁵N to trace the flux of N within the plant-soil system. Above-and belowground growth, CO₂ assimilation, and leaf N content were measured non-destructively over 142 d. After final destructive harvest, roots, stems, and leaves were analyzed for total N and ¹⁵N. There was no CO₂ treatment effect on leaf area, root length, or net assimilation prior to the completion of N addition. Following the N addition, leaf N content increased in both CO₂ treatments, but net assimilation showed a sustained increase only in elevated CO₂ grown plants. Root relative extension rate was greater at elevated CO₂, both before and after the N addition. Although final root biomass was greater at elevated CO₂, there was no CO₂ effect on plant N uptake or allocation. While low soil N availability severely inhibited CO₂ responses, high CO₂ grown plants were more responsive to N. This differential behavior must be considered in light of the temporal and spatial heterogeneity of soil resources, particularly N which often limits plant growth in temperate forests.     

A study on the relationship between leaf conductance,CO2 concentration and carboxylation rate in various species

Leaf conductance g_L is strongly influenced by environmental factors like CO₂, irradiance and air humidity. According to Ball et al. (1987), g_L is correlated with an index calculated as the product of net CO₂ exchange rate A and ambient water vapour concentration W_a, divided by ambient CO₂ concentration c_a. However, this empirical model does not apply to high values of g_L observed at c_a below CO₂ compensation concentration . Therefore, we applied modified indices in which A is replaced by estimates for the rate of carboxylation. Such estimates, P₁ and P₂, were determined by adding to A the quotient of and the sum of gas phase resistance r_g and intracellular resistance for CO₂ exchange r_i, P₁ = A+/(r_g + r_i), or the quotient of and r_i, P₂ = A + /r_i. If P₂ is chosen, c_a in the Ball index has to be replaced by the intercellular CO₂ concentration c_i. By using the modified indices P₁·W_a/c_a and P₂·W_a/c_i, we analysed data from the C₃ species Nicotiana tabacum and Nicotiana plumbaginifolia, the C₃–C₄ intermediate species Diplotaxis tenuifolia, and the C₄ species Zea mays. The data were collected at widely varying levels of irradiance and CO₂ concentration. For all species uniform relationships between g_L and the new indices were found for the whole range of CO₂ concentrations below and above . Correlations between g_L and P₁·W_a/c_a were closer than those between g_L and P₂·W_a/c_i because P₁/c_a implicitly contains g_L. Highly significant correlations were also obtained for the relationships between g_L and the ratios P₁/c_a and P₂/c_i.     

The response of CO2 exchange rate to photosynthetic photon flux density for several Populus clones under laboratory conditions

No significant differences were found between four mathematical equations describing the response of CO₂ exchange rate to photosynthetic photon flux density in seven poplar clones under laboratory conditions. Choice of an optimal equation for poplar may be based on the contemplated aims. High significant differences (at p<0.001) were found among the clones.Research was supported by the Instituut tot Aanmoediging van het Wetenschappelijk Onderzoek in Nijverheid en Landbouw (I.W.O.N.L.), Brussels.     

CO2 exchange under varying light intensities in some under- and overtemperature subtropical tree species

CO₂ exchange, transpiration and stomatal conductance of 39 subtropical tree species were studied under five light intensities at around atmospheric air temperatures found in subtropics during the active growth period of these species. Photosynthesis rates under different light intensities were strongly dependent on leaf to air temperature differences (T). Based on T, 39 species fell in two distinct categories namely, undertemperature and overtemperature. Majority of the species in the former group were found to have relatively higher rate of photosynthesis, stomatal conductance, transpiration as well as water use efficiency. These species also showed higher light saturation for photosynthesis. The significance of the results is discussed in terms of adaptive potential in the two types of species.     

Effect of O2 and CO2 on net CO2 exchange in a high-CO2-requiring mutant of Chlamydomonas reinhardtii during dark-light-dark transitions

Net CO₂ exchange was monitored through a dark-light-dark transition, under 2% and 21% O₂ in the presence and absence of CO₂, in Chlamydomonas reinhardtii wild type and the high-CO₂-requiring mutant ca-1-12-1C. Upon illumination at 350 l/l CO₂, ca-1-12-1C cell exhibited a large decrease in net CO₂ uptake following an initial surge of CO₂ uptake. Net CO₂ uptake subsequently attained a steady-state rate substantially lower than the maximum. A large, O₂-enchanced post-illumination burst of CO₂ efflux was observed after a 10-min illumination period, corresponding to a minimum in the net CO₂ uptake rate. A smaller, but O₂-insensitive post-illumination burst was observed following a 30-min illumination period, when net CO₂ uptake was at a steady-state rate. These post-illumination bursts appeared to reflect the release of an intracellular pool of inorganic carbon, which was much larger following the initial surge of net CO₂ uptake than during the subsequent steady-state CO₂ uptake period.With the mutant in CO₂-free gas, O₂-stimulated, net CO₂ efflux was observed in the light, and a small, O₂-dependent post-illumination burst was observed. With wild-type cells no CO₂ efflux was observed in the light in CO₂-free gas under either 2% or 21% O₂, but a small, O₂-dependent post-illumination burst was observed. These results were interpreted as indicating that photorespiratory rates were similar in the mutant and wild-type cells in the absence of CO₂, but that the wild-type cells were better able to scavenge the photorespiratory CO₂.     

Interrelationship between water film thicknesses and contact angles and a model for CO2 adhesion

Thermodynamics of contact angle phenomena is strongly affected by the presence of thin liquid films. However, at present, studies for CO₂/brine/mineral systems only consider the films apart from contact angles. In this paper, molecular dynamics (MD) simulations have been performed to simultaneously investigate the interrelationship between water film thicknesses and water contact angles. Two types of contact angles were considered namely Young’s contact angle (no water film is present) and contact angle with film (a stable film is present). The results showed that as Young’s contact angle increased, film thickness decreased which leading to increasing of contact angle with film. The effects of CO₂-mineral pre-contact have also been investigated and it has been found that on mediate hydrophilic surfaces (Q³), water films were present when CO₂ droplets were placed above the surfaces, however, water films were absent when CO₂ droplets directly contact with the surfaces. This phenomenon implies that water films on mineral surfaces have a possibility to rupture and a film rupture mechanism for CO₂ adhesion on hydrated mineral surfaces was proposed. These results may provide new information on interactions among CO₂, water/brine and mineral to better understand the behaviour of CO₂ during geologic sequestration.