Biogenic silica and phosphorus accumulation in sediments as indices of eutrophication in the Laurentian Great Lakes

Biogenic silica (BSi), total phosphorus (TP), and biologically available phosphorus (AVP) were measured in short cores from Lake Michigan, Lake Erie, and Lake Ontario. Peaks in BSi concentration and peaks in BSi:TP or BSi:AVP ratios provided stratigraphic signals of water column silica (Si) depletion as a response of increased diatom production to P enrichment and decreased diatom production resulting from silica depletion. By contrast the stratigraphic record of P accumulation provided very weak signals of the historical nutrient enrichment in the water column. These results indicate that system P recycling has a higher rate constant than Si recycling and, as a consequence, that relatively small levels of P enrichment can increase diatom production and sedimentation eventually causing Si depletion and Si-limited diatom production in the water mass.     

Changes in valve morphology of Thalassiosira decipiens (Bacillariophyceae) cultured in media of four different salinities

The possible effect of different salinities on the valve morphology of the marine centric diatom Thalassiosira decipiens was investigated. Cultures were grown in media of salinities ranging from 2 to 35%. for 40 days. Only the 15, 20, 25, and 30%. cultures had sufficient growth for statistical analysis of population differences. Areola shape, pattern, and density changed significantly with decreasing salinity. Valves with areola patterns skewed off-centre were more frequent in the lower salinities. Valve diameter also showed a significant decrease. Valves having reduced or missing fultoportulae and rimoportulae were common in the 15 and 20%. cultures.     

Bacterial and Archaeal Community Structure in the Surface Diatom Sediments of Deep Freshwater Lake Baikal (Eastern Siberia)

Diatom sediment records of large lakes can be used to decipher the history of ancient phytoplankton. The upper layer of the sediment is an important area of remineralization of the sedimenting phytoplankton biomass. It hosts a bacterial community different from those of both the water column and deeper sediment layers. In this work, we analyzed the structure and diversity of the communities of Bacteria and Archaea in the surface sediment core containing valves of diatoms, the major producers in Lake Baikal. Pyrosequencing of the bacterial V3–V4 region of the 16 S ribosomal RNA (rRNA) and archaeal V1–V3 16 S rRNA gene regions yielded 29,168 and 36,997 reads, respectively. In total, we have identified 33 bacterial phyla; uncultured Actinobacteria were the most abundant in the upper layers, while lower sediment was dominated by Firmicutes and Alphaproteobacteria. The composition of the archaeal community changed with depth, but was generally dominated by Crenarchaeota from the classes Marine Group I and Miscellaneous Crenarchaeotic Group, as well as Euryarchaeota from the class Thermoplasmata. These dominant bacterial and archaeal taxa are presumed to participate in the destruction of buried organic matter, which eventually leads to degradation of the diatom valves.     

Persistence and Dissemination of Introduced Bacteria in Freshwater Microcosms

Abstract Genetically engineered microorganisms (GEMs) released into the environment may persist and spread, depending on their features and conditions encountered. In streams, the extent of dispersion depends largely on cycles of attachment to, and detachment from, biofilms, because distribution of microorganisms is limited only by stream flow and settling rates, and because biofilms are the primary generator of bacterial cells. To simulate dissemination of introduced bacteria, multiple antibiotic-resistant bacteria (Chryseobacterium (Flavobacterium) indologenes) were introduced into microcosms containing water, sediments, and leaves. Marked bacteria reached greatest abundances in sediments, and contributions of bacteria from sediments to other habitats was relatively low. Bacterial attachment and detachment occurred rapidly, but the ability of marked bacteria to successfully exploit receiving habitats was comparatively low. Current speed influenced bacterial dissemination. A mechanistic model, using mortality and attachment/detachment rates, determined experimentally, was developed to predict bacterial exchanges in nature. The model was predictive of experimental results when only 5% of bacteria in sediments were available for detachment. Based on model results, an introduced bacterial strain, with mortality rates comparable to those of the model strain, is predicted to maintain highest abundances in sediments. However, within a month, abundance was predicted to be reduced by 98%; long-term persistence is possible if these low population sizes can be sustained. Received: 11 August 1997; Accepted: 9 December 1997     

Bacterioplankton and Phytoplankton Populations in a Rapidly-Flushed Eutrophic Reservoir

Densities of bacterioplankton and phytoplankton were studied in relation to water retention time, temperature, nutrient concentrations, and other variables in a eutrophic montane reservoir (Bluestone Lake, West Virginia, U.S.A.). Weak temperature stratification occurred occasionally during the summer, but the reservoir did not become anaerobic. Water retention times were short (3.9 to 9.7 days between June and December), and differences in flushing rate within that range were important in regulating phytoplankton populations. Green algae and planktonic diatoms were dominant in summer during periods when water residence times were shorter. The occurrence of blue-green algal blooms in fall was related to increased water residence times. Retention time was highly correlated with the percent composition of phytoplankton represented by Anabaena spp. and Microcystis sp. (r=0.898, p<0.001). Advective effects limited phytoplankton biomass when retention time was shortest, but were not as important when retention times were longer. Peaks in bacterial densities often coincided with decreases in viable algal cell densities, so bacterioplankton were less directly related to retention time.     

A new trend in the development of the phytoplankton in the Oosterschelde (SW Netherlands) during and after the construction of a storm-surge barrier

During the pre-barrier period (1982–83), the Oosterschelde phytoplankton were a diatom-dominated community, comprising a species-rich assemblage throughout the year. Assemblages of spring, early summer and summer, developed in response to a gradually evolving turbidity-light gradient during the course of the year.During the barrier-construction period (1984–87), characterized by decreasing current velocities, increasing sedimentation of suspended matter, increasing water transparencies and unchanged nutrient conditions, the growth season for the phytoplankton started earlier and lasted longer. Some flagellate species responded by much higher biomass than before. The impact of short-term climatic factors during this period, notably severe winters, could be illustrated with examples of clear responses of some species (e.g. Biddulphia aurita).In the post-barrier years (1987–90) a changed light-nutrient-salinity regime (i.e. much light, limitation of nitrate, high salinity) was demonstrated and an extended summerseason developed, without the original gradual transitions. This was reflected in an a-seasonal trend of the phytoplankton assemblage, where summer species were already observed in spring and spring species decreased in abundance. In summer small flagellates increased and some weakly silicified diatom species made their appearance. In the eastern compartment no colony formation of Phaeocystis occurred in summer and this was thought to be due to nitrate limitation. Changes in abundance of some species (Phaeocystis, Ditylum brightwellii, Skeletonema costatum), occurring during the entire period of investigation (1982–90), could be explained using field observations compared with experimental evidence from the literature.The relationship between species composition and biomass on the one hand and environmental variables on the other hand, was analysed in a Canonical Correspondence Analysis, for both compartments separately.     

Rock Fragments in Trichloroethene Microcosms for Bedrock Aquifers

The purpose of this study was to evaluate microcosm methods that can be used to predict the in situ anaerobic reductive dechlorination of trichloroethene (TCE) in bedrock aquifers with and without amendments. Microcosm conditions (e.g., surface area:volume ratio, initial TCE concentration [C ₀], incubation temperature) were selected to simulate in situ conditions at the site. The effect of rock media in the microcosms as a source of surface area and nutrients was also assessed. Comparison was made between microcosms constructed with sterile rock media and rock media submerged for 45 days in a groundwater well within a TCE plume for field colonization. Statistically significant biotic degradation of TCE was observed in microcosms with both groundwater only and non-field-colonized rock media, when amended with lactate. Measured half-lives were similar to half-lives observed in field conditions. Normalizing biotic results to abiotic results provides a method that deducts the abiotic losses and allows complete comparison between sample rounds, assuming samples were randomly selected for analysis within the sample round to avoid systematic errors or variation.     

Conjugal Plasmid Transfer in Bacillus subtilis under Conditions of Soil Microcosms

Conjugal transfer of the small plasmid pUB110 betweenBacillus subtilis strains was studied under conditions of microcosms with sterile and nonsterile soil. Plasmid transfer proved to be possible after soil inoculation with vegetative partner cells or with their spores. Plasmid transfer occurred at temperatures of 30 and 22–23°C.     

Diatom flora of a kettle-hole bog in relation to hydrarch succession zones

Diatom assemblages were compared to the vegetational seres and to physical and chemical parameters of a kettle-hole bog which had distinct hydrarch successional zones and was in turn surrounded by a cattail marsh and a willow swamp. Multivariate analysis of variance showed the water parameters (temperature, pH, conductivity, color, free calcium) among the zones were significantly different (p < 0.0001). Diatoms were enumerated using the first 500 valves counting method and results showed each zone had a distinct flora. Cluster analysis of the diatom data by both species and zones grouped the bog successional zones into one major group and the marsh/swamp zones into the second major group. The occurrence of well defined seral stages of vegetation and diatoms suggests microorganisms are undergoing ecological succession in kettle-hole bogs.     

Anaerobic Biodegradation of Alkylbenzenes in Laboratory Microcosms Representing Ambient Conditions

A microcosm study was performed to document the anaerobic biodegradation of benzene, toluene, ethylbenzene, m- xylene, and/or o-xylene in petroleum-contaminated aquifer sediment from sites in Michigan (MI) and North Carolina (NC) and relate the results to previous field investigations of intrinsic bioremediation. Laboratory microcosms, designed to simulate ambient conditions, were constructed under anaerobic conditions with sediment and groundwater from source, mid-plume, and end-plume locations at each site. The general patterns of biodegradation and electron acceptor utilization in the microcosms were consistent with field data. At the MI site, methane was produced after a moderate lag period, followed by toluene degradation in all sets of microcosms. At the NC site, biodegradation of the target compounds was not evident in the source area microcosms. In the mid-plume microcosms, toluene and o-xylene biodegraded first, followed by m-xylene and benzene, a pattern consistent with contaminant decay along the plume length. Chemical extraction of microcosm sediment at the beginning and end of me incubation indicated that iron-reducing conditions were dominant and iron reduction occurred on a sediment fraction not extracted by 0.5N HC1. In the end-plume microcosms, degradation of benzene, toluene, and xylene isomers occurred but was variable between replicates. Consistent with field data, dissolved concentrations of the target contaminant(s) persisted at low but detectable levels (0.05 to 0.25 μM) in microcosms from both sites where biodegradation was measured.     

INTERACTIONS BETWEEN PULSED NUTRIENT SUPPLIES AND A PHOTOCYCLE AFFECT PHYTOPLANKTON COMPETITION FOR LIMITING NUTRIENTS IN LONG-TERM CULTURE1

The influence of periodic nutrient supplies and a photocycle on phytoplankton competition for limiting nutrients was examined using the diatoms Thalassiosira rotula Meunier (clone 411) and Chaetoceros sp. cf. vixvisibilis Schiller (clone 847). Chaetoceros sp. cf. vixvisibilis displaced T. rotula from ammonium-limited cultures under constant light irrespective of whether ammonium was supplied continuously, in 6 pulses.day^?1 or in a single daily pulse. In contrast, the species coexisted under the 14:10 h LD photocycle under either continuous or pulsed ammonium supplies with the relative abundance of C. sp. cf. vixvisibilis increasing as the interval between ammonium additions lengthened. Coexistence was not observed with either silicic acid or nitrate limitation. Chaetoceros sp. cf. vixvisibilis displaced T. rotula from both nitrate- and silicic acid-limited chemostat cultures and from semi-continuous cultures grown under the same photoperiod that produced coexistence with a daily pulse of ammonium. The presence of a photocycle was both necessary and sufficient to permit coexistence with ammonium limitation. Under continuous ammonium supply the photocycle may have induced a temporal separation of ammonium uptake between species, permitting sharing of the limiting nutrient and coexistence. In contrast, the species were shown to be in direct competition for the daily ammonium pulse. A competition model suggested that coexistence in this case arose from a balance between the species’ammonium uptake rates and their nitrogen demands for steady-state growth induced by the photocycle. The results indicate that variations in nutrient supply rates may contribute to the coexistence of phytoplankton species in the sea, but that the identity of the limiting nutrient and the influence of variations in other non-limiting resources play important roles in affecting the outcome of nutrient competition among planktonic algae.     

Seasonal changes in sedimenting material collected by high aspect ratio sediment traps operated in a holomictic eutrophic lake

Cylindrical sediment traps with an aspect ratio (height (60 cm): diameter (5.1 cm)) of 11.8 were located 1 m above the surface sediment by a rigid metal framework support. Traps were exposed in Lough Neagh for one year, from May 1978. Each trap collected between 11 and 12 cm of faintly laminated sediment. One 12 cm sediment column was examined using conventional palaeolimnological techniques of core extrusion and analysis. The algal record in trapped sediment is shown to correspond with successional changes in phytoplankton abundance in the lake during the year of study. The sediment accumulation rate measured by the traps is an order of magnitude greater than that measured in dated sediment cores and redeposited and inwashed sediment formed the bulk of trapped material. However, the value of these high aspect ratio traps is that they provide a continuous but qualitative account of compositional changes in sedimenting material through time. Their potential as long term biological monitoring devices is emphasized.     

Effects of Detergents on in vitro Growth of Diatom Alga Thalassiosira pseudonana

The growth of the diatom alga Thalassiosira pseudonana was studied when exposed to an environment polluted by a detergent. We determined concentrations that inhibit cell division (10 mg/l) instead of algae growth (0.1 and 1 mg/l. It was shown that T. pseudonana can adapt to high detergent concentrations. The stimulation of the growth of Thalassiosira within a range of 0.03–0.08 mg/l concentration has been registered.     

Diatom distribution and status of organic pollution in sewage drains

Data on the limnology of various sewage drains meeting the River Yamuna in Delhi suggest that diatom distribution, seasonal and total, and concentration of nitrate nitrogen vary with the degree of organic pollution. The significance of such a relationship for identifying certain diatoms as water quality indicators is discussed.     

Diatom community structure on in-service cruise ship hulls

Diatoms are an important component of marine biofilms found on ship hulls. However, there are only a few published studies that describe the presence and abundance of diatoms on ships, and none that relate to modern ship hull coatings. This study investigated the diatom community structure on two in-service cruise ships with the same cruise cycles, one coated with an antifouling (AF) system (copper self-polishing copolymer) and the other coated with a silicone fouling-release (FR) system. Biofilm samples were collected during dry docking from representative areas of the ship and these provided information on the horizontal and vertical zonation of the hull, and intact and damaged coating and niche areas. Diatoms from the genera Achnanthes, Amphora and Navicula were the most common, regardless of horizontal ship zonation and coating type. Other genera were abundant, but their presence was more dependent on the ship zonation and coating type. Samples collected from damaged areas of the hull coating had a similar community composition to undamaged areas, but with higher diatom abundance. Diatom fouling on the niche areas differed from that of the surrounding ship hull and paralleled previous studies that investigated differences in diatom community structure on static and dynamically exposed coatings; niche areas were similar to static immersion and the hull to dynamic immersion. Additionally, diatom richness was greater on the ship with the FR coating, including the identification of several new genera to the biofouling literature, viz. Lampriscus and Thalassiophysa. These results are the first to describe diatom community composition on in-service ship hulls coated with a FR system. This class of coatings appears to have a larger diatom community compared to copper-based AF systems, with new diatom genera that have the ability to stick to ship hulls and withstand hydrodynamic forces, thus creating the potential for new problematic species in the biofilm.     

Comparison of Freshwater Diatom Assemblages from a High Arctic Oasis to Nearby Polar Desert Sites and Their Application to Environmental Inference Models

Arctic oases are regions of atypical warmth and relatively high biological production and diversity. They are small in area (<5 km²) and uncommon in occurrence, yet they are relatively well studied due to the abundance of plant and animal life contained within them. A notable exception is the lack of research on freshwater ecosystems within polar oases. Here, we aim to increase our understanding of freshwater diatom ecology in polar oases. Diatoms were identified and enumerated from modern sediments collected in 23 lakes and ponds contained within the Lake Hazen oasis on Ellesmere Island, and compared with diatom assemblages from 29 sites located outside of the oasis across the northern portion of the island. There were significant differences in water chemistry variables between oasis and northern sites, with oasis sites having higher conductivity and greater concentrations of nutrients and related variables such as dissolved organic carbon (DOC). Taxa across all sites were typical of those recorded in Arctic freshwaters, with species from the genera Achnanthes sensu lato, Fragilaria sensu lato, and Nitzschia dominating the assemblages. A correspondence analysis (CA) ordination showed that oasis sites generally plotted separately from the northern sites, although the sites also appear to plot separately based on whether they were lakes or ponds. Canonical correspondence analysis (CCA) identified specific conductivity, DOC, and SiO₂ as explaining significant (P < 0.05) and additional amounts of variation in the diatom data set. The most robust diatom‐based inference model was generated for DOC, which will provide useful reconstructions on long‐term changes in paleo‐optics of high Arctic lakes.     

Uncertainty in Diatom Assessment: Sampling, Identification and Counting Variation

Despite the widespread application of periphytic diatoms to water quality assessment at a regional level, there is no standard European sampling protocol or associated assessment metrics. Furthermore, relatively little is known about the uncertainty in the results of such assessments. One of the objectives of the European project for the Standardisation of River Classifications (STAR) is to improve and standardise diatom assessment methods. An extensive diatom ring test, together with an audit of the project results, provided a better understanding and quantification of the uncertainty in quality assessment of running waters using diatoms. The variation in multimetric analysis shows that the choice of site and substrate for sampling, the inter-operator differences in diatom taxonomy and the counting techniques are the primary sources of uncertainty. To some extent, this variation also reveals the robustness of specific metrics in relation to the sources of uncertainty. Of the three most common substrate types tested (stone, macrophyte and sediment), macrophytes emerge as the most preferred substrate for diatom sampling when performing multimetric water quality assessment.     

Diatom assemblages promote ice formation in large lakes

We present evidence for the directed formation of ice by planktonic communities dominated by filamentous diatoms sampled from the ice-covered Laurentian Great Lakes. We hypothesize that ice formation promotes attachment of these non-motile phytoplankton to overlying ice, thereby maintaining a favorable position for the diatoms in the photic zone. However, it is unclear whether the diatoms themselves are responsible for ice nucleation. Scanning electron microscopy revealed associations of bacterial epiphytes with the dominant diatoms of the phytoplankton assemblage, and bacteria isolated from the phytoplankton showed elevated temperatures of crystallization (T_c) as high as −3 °C. Ice nucleation-active bacteria were identified as belonging to the genus Pseudomonas, but we could not demonstrate that they were sufficiently abundant to incite the observed freezing. Regardless of the source of ice nucleation activity, the resulting production of frazil ice may provide a means for the diatoms to be recruited to the overlying lake ice, thereby increasing their fitness. Bacterial epiphytes are likewise expected to benefit from their association with the diatoms as recipients of organic carbon excreted by their hosts. This novel mechanism illuminates a previously undescribed stage of the life cycle of the meroplanktonic diatoms that bloom in Lake Erie and other Great Lakes during winter and offers a model relevant to aquatic ecosystems having seasonal ice cover around the world.