应用RAPD分子标记技术探讨3种石斛属植物的种间关系

采用RAPD分子标记技术,分析了金钗石斛、铁皮石斛和齿瓣石斛三种石斛属植物的种间关系。10个引物产生的113条DNA扩增片段中,106条（93.81%）具有多态性,利用113个RAPD标记,计算遗传距离,利用非加权组平均法建立聚类图。结果表明,RAPD标记技术较好地从分子水平揭示金钗石斛、铁皮石斛和齿瓣石斛三种石斛属植物的遗传背景、亲缘关系,并为后期在DNA水平上对药用石斛的开发利用提供资料。     

西双版纳地区的石斛资源调查及鉴定

对石斛主产区之一－－云南西双版纳的药源调查和商品鉴定结果表明,有２２种石斛属、１种金石斛属及１种石仙桃属植物加工成石斛商品,其中昌帽石斛Ｄｅｎｄｒｏｂｉｕｍ ｃｒｙｓｔａｌｌｉｎｕｍ Ｒｃｈｂ．ｆ．,流苏石斛Ｄ．ｆｉｍｂｒｉａｔｕｍ Ｈｏｏｋ。囊唇石斛Ｄ．ｍｏｓｃｈａｔｕｍ Ｓｗ及鼓槌石斛Ｄ．ｃｈｒｙｓｏｔｏｘｕｍ Ｌｉｎｄｌ．为主要品种。     

中药铁皮石斛品种资源及商品归属问题初探

铁皮石斛在传统分类中属草石斛类,民间将黑节草、霍山石斛、细茎石斛都称为铁皮石斛,笔者认为铁皮石斛单列为数种功能相似植物的类群更有商品学上的价值     

道地药材霍山石斛及其相似种的分子鉴定

为检测霍山石斛与霍山产铜皮石斛、霍山产铁皮石斛及其它产地的几种药用石斛的差异,对霍山石斛及其相似种进行ISSR分子标记比较研究。结果表明,尽管霍山石斛及其相似种的外部形态差异较小,但在ISSR分子标记指纹图谱上却存在着显著而稳定的差异。因此,根据ISSR分子标记指纹图谱所显示的多态性位点差异,能准确鉴别霍山石斛及其相似种植物及药材。此方法简单、稳定性高、可重复性好,在霍山石斛的分子鉴定研究中有较大的应用价值。     

金丝桃属和三腺金丝桃属植物叶的红外光谱分析及其与分类群鉴定的相关性

利用傅里叶红外光谱仪和OMINI采样器直接迅速准确地测定金丝桃属(Hypericum L.)9组43种1亚种1变种和三腺金丝桃属(Triadenum Raf)2种植物的红外光谱,结果表明:各分类群(种)的红外光谱具有高度特异性和重现性,这两属及其金丝桃属组间的红外光谱图存在较大的差异,而组内种间红外光谱图的差异较小,同种不同分布区和不同发育时期的叶的红外光谱几无差别;其红外光谱图的变化可以作为这两属植物的分类依据之.这也暗示利用已知的标准红外光谱图库,可以区分和鉴定出这两属或其他属植物的种类.     

金丝桃属和三腺金丝桃属植物叶的红外光谱分析及其与分类群鉴定的相关性

利用傅里叶红外光谱仪和OMINI采样器直接迅速准确地测定金丝桃属 (Hypericum L.) 9组43种1亚种1变种和三腺金丝桃属(Triadenum Raf.) 2种植物的红外光谱,结果表明:各分类群(种)的红外光谱具有高度特异性和重现性,这两属及其金丝桃属组间的红外光谱图存在较大的差异,而组内种间红外光谱图的差异较小,同种不同分布区和不同发育时期的叶的红外光谱几无差别;其红外光谱图的变化可以作为这两属植物的分类依据之一。这也暗示利用已知的标准红外光谱图库,可以区分和鉴定出这两属或其他属植物的种类。     

13种石斛属植物遗传多样性的AFLP分析

采用AFLP技术对13种石斛属植物的遗传多样性进行了分析。选择性扩增引物组合E ACT/M CAC、E AAC/M CAC和E ACA/M CAC分别对这13种材料进行扩增,得到丰富的条带。在100-300bp共得到346条带,多态性带342条,多态性百分率为98.8%。聚类分析结果表明,在相似系数0.54处,可将13种材料分为Ⅰ、Ⅱ、Ⅲ类。Ⅰ类包括:串珠石斛、铁皮石斛、广东石斛、重唇石斛、晶帽石斛、细叶石斛、滇桂石斛、报春石斛、玫瑰石斛、球花石斛;Ⅱ类包括:鼓槌石斛;Ⅲ类包括:美花石斛(花,浅红)、美花石斛(花,淡白)。AFLP分析结果与传统分类学的结果基本一致,表明该标记技术对石斛属植物的遗传多样性和分类研究是可行的。     

4种石斛属植物花朵挥发性成分分析

为了解石斛属植物花朵中的挥发性成分, 利用固相微萃取(SPME)方法结合GC-MS 技术测定了鼓槌石斛、罗河石斛、细叶石斛和密花石斛盛花期的花朵挥发性成分及其相对含量。结果表明, 从4 种石斛属植物花朵中共鉴定出挥发性成分57 种, 包括酯类、萜烯类、醇类、烷类、醛类、酮类、醌类、芳香族和含氮化合物。4 种石斛花朵挥发性成分的组成和含量差异明显。鼓槌石斛和细叶石斛的主要香气成分是3-蒈烯, 相对含量分别为84.606% 和71.251%。罗河石斛挥发性成分中水杨酸甲酯相对含量最高(57.449%), 其次为D-柠檬烯(22.416%)。密花石斛花朵主要挥发性成分是2-亚甲基-4,8,8-三甲基-4-乙烯基-双环[5.2.0]壬烷(82.013%), 其次为α-法尼烯(4.699%)。这些对于香型石斛兰品种的培育和兰花精油产品开发提供了参考。     

干旱-复水对两种石斛属植物叶水势的影响

石斛属植物多附着在其他植物体或岩石上,水分获取困难,其特殊的水分利用策略是其生存和发展的重要保证.为弄清石斛属植物对干旱胁迫的适应能力和机制,该文选用3年生金钗石斛和铁皮石斛,通过盆栽控水进行干旱胁迫和复水处理,探讨在不同干旱历时和干旱后复水条件下两种石斛的叶水势变化情况.结果表明:随着干旱时间的延长,两种石斛叶水势均...     

6-BA和GA_3对盐胁迫下红杆铁皮石斛幼苗生理生化影响

以红杆铁皮石斛Dendrobium officinale为材料,研究植物生长调节剂6-苄氨基腺嘌呤(6-BA)和赤霉素(GA3)对其幼苗在Na Cl胁迫下的生理生化影响。结果表明,盐胁迫下,低浓度6-BA和GA3处理均可不同程度地提高红杆铁皮石斛幼苗的茎生长率,抑制根的伸长,且GA3抑制效果大于6-BA;随着6-BA浓度增加,盐胁迫下红杆铁皮石斛叶片叶绿素含量降低,类胡萝卜素含量则呈先升后降的趋势,而较高浓度GA3(4.0 mg·L-1)处理同时提高叶绿素和类胡萝卜素含量;低浓度6-BA(2.0 mg·L-1)处理能提高红杆铁皮石斛叶片可溶性糖含量,相同浓度GA3处理则降低可溶性糖含量,但高浓度GA3处理的可溶性糖含量与对照无显著差异。因此,添加适当浓度的植物生长调节剂能提高光合色素及可溶性糖的合成与积累,从而缓解盐胁迫对红杆铁皮石斛植株的伤害。     

Interpretation of DNA vibration modes. II--The adenosine and thymidine residues involved in oligonucleotides and polynucleotides

Normal coordinate analysis of the adenosine and thymidine residues involved in the right- and left-handed conformations of oligonucleotides and polynucleotides has been performed. The valence force field, employed in this work, allowed recently to reproduce the vibrational spectra of 2'-deoxythymidine and 2'-deoxyadenosine. The calculated wavenumbers based on a non-redundant set of internal coordinates have been compared to the Raman and infrared peak positions arising from A, B, C, D and Z conformations, in the 1550-1250 cm-1 and 800-600 cm-1 spectral regions: i.e. characteristic of adenosine and thymidine residues. Moreover, a systematic study has been performed on the evolution of the vibrational wavenumbers as a function of the glycosidic angle (chi) and the sugar pucker conformation.     

Flash-induced Fourier transform infrared detection of the structural changes during the S-state cycle of the oxygen-evolving complex in photosystem II

Fourier transform infrared (FTIR) difference spectra of all flash-induced S-state transitions of the oxygen-evolving complex were measured using photosystem II (PSII) core complexes of Synechococcus elongatus. The PSII core sample was given eight successive flashes with 1 s intervals at 10 degrees C, and FTIR difference spectra upon individual flashes were measured. The obtained difference spectra upon the first to fourth flashes showed considerably different spectral features from each other, whereas the fifth, sixth, seventh, and eighth flash spectra were similar to the first, second, third, and fourth flash spectra, respectively. The intensities at the wavenumbers of prominent peaks of the first and second flash spectra showed clear period four oscillation patterns. These oscillation patterns were well fitted with the Kok model with 13% misses. These results indicate that the first, second, third, and fourth flash spectra represent the difference spectra upon the S(1) --> S(2), S(2) --> S(3), S(3) --> S(0), and S(0) --> S(1) transitions, respectively. In these spectra, prominent bands were observed in the symmetric (1300-1450 cm(-)(1)) and asymmetric (1500-1600 cm(-)(1)) stretching regions of carboxylate groups and in the amide I region (1600-1700 cm(-)(1)). Comparison of the band features suggests that the drastic coordination changes of carboxylate groups and the protein conformational changes in the S(1) --> S(2) and S(2) --> S(3) transitions are reversed in the S(3) --> S(0) and S(0) --> S(1) transitions. The flash-induced FTIR measurements during the S-state cycle will be a promising method to investigate the detailed molecular mechanism of photosynthetic oxygen evolution.     

傅里叶变换红外光谱(FTIR)技术对滇龙胆组织培养的研究

野生药用植物资源的不断减少,使得寻找其原植物的合适替代品显得尤为重要。利用组培材料代替野生药用植物作为药源已取得重大进展,但利用傅里叶变换红外光谱(Fourier transform infrared spectroscopy,FTIR)技术筛选合适的组培材料作为野生药用植物替代资源方面的应用鲜有报道。本研究采用FTIR结合偏最小二乘判别分析(partial least squares discriminant analysis,PLS-DA)对滇龙胆组织培养形成的愈伤组织(肉质部、茎、叶)、增殖苗(肉质部、茎、叶)、生根苗(根、茎、叶)进行比较。结果显示:(1)从原始FTIR光谱图上看,滇龙胆肉质部和根部峰形相似,茎和叶峰形相似;(2)二阶导数光谱图扩大了样品间的差异。在龙胆苦苷的主要吸收峰1612 cm-1附近,吸收峰强度依次为:生根苗叶增殖苗叶和生根苗茎增殖苗茎愈伤组织叶,愈伤组织茎及肉质部、增殖苗肉质部和生根苗根部在该处无吸收峰;(3)PLS-DA得分图表明,同一组培阶段相同组织部位样品聚集在一起,而愈伤组织、增殖苗、生根苗及其各组织部位能够较好的分开。其中:肉质部、根部与茎叶之间距离较远,表明其化学成分和含量可能差异较大;肉质部和根部样品间距离较近,茎和叶样品间距离也较近。二阶导数光谱图显示,组培材料有望代替其原植物满足药用需求;若以龙胆苦苷含量为评价对象,生根苗叶则可能具有更大的开发潜能,有望代替野生滇龙胆以缓解其资源稀缺局面。本研究结果表明,采用傅里叶变换红外光谱法可以简便有效地对药用植物不同组培阶段不同组织部位的替代潜力及开发利用进行初步评估。     

A study on the differences between oral squamous cell carcinomas and normal oral mucosas measured by Fourier transform infrared spectroscopy

We investigated the differences of Fourier transform infrared (FTIR) spectra between oral squamous cell carcinoma (OSCC) and normal gingival epithelium (NGE) or normal subgingival tissue (NST). We used 15 specimens of OSCC which had not been treated before measurement and 10 of NGE or NST. We also used cultured oral squamous cell carcinoma (COSCC) and the tissue (MSCC) which massed for 3 months after the cultured oral squamous cell carcinoma was transplanted into the lower back of a rat. Those tissue spectra were compared with the purified human collagens and human keratin. One half of every tissue specimen was measured with FTIR and the other half was investigated histologically. The differences of FTIR spectra between OSCC and NGE were observed in the bands between 1431 and 1482 cm(-1) and between 1183 and 1274 cm(-1). The shoulder at 1368 cm(-1) tended to disappear in OSCC, and the peaks at 1246 and 1083 cm(-1) found in NGE tended to shift to those at 1242 and 1086 cm(-1) in OSCC, respectively. The infrared spectrum of NST was noticed to be strongly influenced by the presence of collagen. Significant differences were also observed in the second derivative FTIR spectra between OSCC and NGE. Our data suggested that this infrared technique is applicable to clinical diagnostics.     

Analysis of flash-induced FTIR difference spectra of the S-state cycle in the photosynthetic water-oxidizing complex by uniform 15N and 13C isotope labeling

Protein bands in flash-induced Fourier transform infrared (FTIR) difference spectra of the S-state cycle of photosynthetic water oxidation were analyzed by uniform (15)N and (13)C isotopic labeling of photosystem II (PS II). The difference spectra upon first- to fourth-flash illumination were obtained with hydrated (for the 1800-1200 cm(-)(1) region) or deuterated (for the 3500-3100 cm(-)(1) region) films of unlabeled, (15)N-labeled, and (13)C-labeled PS II core complexes from Thermosynechococcus elongatus. Shifts of band frequencies upon (15)N and (13)C labeling provided the assignments of major peaks in the regions of 3450-3250 and 1700-1630 cm(-)(1) to the NH stretches and amide I modes of polypeptide backbones, respectively, and the assignments of some of the peaks in the 1600-1500 cm(-)(1) region to the amide II modes of backbones. Other prominent peaks in the latter region and most of the peaks in the 1450-1300 cm(-)(1) region exhibited large downshifts upon (13)C labeling but were unchanged by (15)N labeling, and hence assigned to the asymmetric and symmetric COO(-) stretching vibrations, respectively, of carboxylate groups in Glu, Asp, or the C-terminus. Peak positions corresponded well with each other among the first- to fourth-flash spectra, and most of the bands in the first- and/or second-flash spectra appeared with opposite signs of intensity in the third- and/or fourth-flash spectra. This observation indicates that the protein movements in the S(1)-->S(2) and/or S(2)-->S(3) transitions are mostly reversed in the S(3)-->S(0) and/or S(0)-->S(1) transitions, representing a catalytic role of the protein moieties of the water-oxidizing complex. Drastic structural changes in carboxylate groups over the S-state cycle suggest that the Asp and/or Glu side chains play important roles in the reaction mechanism of photosynthetic water oxidation.     

Monitoring water reactions during the S-state cycle of the photosynthetic water-oxidizing center: detection of the DOD bending vibrations by means of Fourier transform infrared spectroscopy

Photosynthetic water oxidation takes place in the water-oxidizing center (WOC) of photosystem II (PSII). To clarify the mechanism of water oxidation, detecting water molecules in the WOC and monitoring their reactions at the molecular level are essential. In this study, we have for the first time detected the DOD bending vibrations of functional D 2O molecules during the S-state cycle of the WOC by means of Fourier transform infrared (FTIR) difference spectroscopy. Flash-induced FTIR difference spectra upon S-state transitions were measured using the PSII core complexes from Thermosynechococcus elongatus moderately deuterated with D 2 (16)O and D 2 (18)O. D 2 (16)O-minus-D 2 (18)O double difference spectra at individual S-state transitions exhibited six to eight peaks arising from the D (16)OD/D (18)OD bending vibrations in the 1250-1150 cm (-1) region. This observation indicates that at least two water molecules, not in any deprotonated forms, participate in the reaction at each S-state transition throughout the cycle. Most of the peaks exhibited clear counter peaks with opposite signs at different transitions, reflecting a series of reactions of water molecules at the catalytic site. In contrast, negative bands at approximately 1240 cm (-1) in the S 2 --> S 3, S 3 --> S 0, and possibly S 0 --> S 1 transitions, for which no clear counter peaks were found in other transitions, can be interpreted as insertion of substrate water into the WOC from a water cluster in the proteins. The characteristics of the weakly D-bonded OD stretching bands were consistent with the insertion of substrate from internal water molecules in the S 2 --> S 3 and S 3 --> S 0 transitions. The results of this study show that FTIR detection of the DOD bending vibrations is a powerful method for investigating the molecular mechanism of photosynthetic water oxidation as well as other enzymatic reactions involving functional water molecules.     

Mid- to low-frequency Fourier transform infrared spectra of S-state cycle for photosynthetic water oxidation in Synechocystis sp. PCC 6803

Flash-induced Fourier transform infrared (FTIR) difference spectra for the four-step S-state cycle and the effects of global (15)N- and (13)C-isotope labeling on the difference spectra were examined for the first time in the mid- to low-frequency (1200-800 cm(-1)) as well as the mid-frequency (1700-1200 cm(-1)) regions using photosystem (PS) II core particles from cyanobacterium Synechocystis sp. PCC 6803. The difference spectra clearly exhibited the characteristic vibrational features for each transition during the S-state cycling. It is likely that the bands that change their sign and intensity with the S-state advances reflect the changes of the amino acid residues and protein matrices that have functional and/or structural roles within the oxygen-evolving complex (OEC). Except for some minor differences, the trends of S-state dependence in the 1700-1200 cm(-1) frequency spectra of the PS II cores from Synechocystis were comparable to that of spinach, indicating that the structural changes of the polypeptide backbones and amino acid side chains that occur during the oxygen evolution are inherently identical between cyanobacteria and higher plants. Upon (13)C-labeling, most of the bands, including amide I and II modes and carboxylate stretching modes, showed downward shifts; in contrast, (15)N-labeling induced isotopic shifts that were predominantly observed in the amide II region. In the mid- to low-frequency region, several bands in the 1200-1140 cm(-1) region were attributable to the nitrogen- and/or carbon-containing group(s) that are closely related to the oxygen evolution process. Specifically, the putative histidine ligand exhibited a band at 1113 cm(-1) which was affected by both (15)N- and (13)C-labeling and showed distinct S-state dependency. The light-induced bands in the 900-800 cm(-1) region were downshifted only by (13)C-labeling, whereas the bands in the 1000-900 cm(-1) region were affected by both (15)N- and (13)C-labeling. Several modes in the mid- to low-frequency spectra were induced by the change in protonation state of the buffer molecules accompanied by S-state transitions. Our studies on the light-induced spectrum showed that contributions from the redox changes of Q(A) and the non-heme iron at the acceptor side and Y(D) were minimal. It was, therefore, suggested that the observed bands in the 1000-800 cm(-1) region include the modes of the amino acid side chains that are coupled to the oxidation of the Mn cluster. S-state-dependent changes were observed in some of the bands.     

应用FTIR和NMR研究短梗霉多糖分子结构

短梗霉多糖是出芽短梗霉产生的一种胞外多糖,具有极好的成膜、成纤维、阻气、粘接、易加工、无毒性等特性,是微生物多糖中最令人瞩目的多糖之一．本研究应用ＦＴＩＲ和ＮＭＲ技术对由出芽短梗霉胞外产生的短梗霉多糖进行了分析．短梗霉多糖的红外光谱（４０００～４００ｃｍ－１）,具有明显的多糖特征吸收峰,证明多糖是由α－Ｄ－吡喃葡萄糖残基组成．应用先进的一维和二维核磁共振技术,在绝对温度３４３Ｋ下获得短梗霉多糖１Ｈ－ＮＭＲ谱和１３Ｃ－ＮＭＲ谱,确证短梗霉多糖的结构单元是α－１,４麦芽三糖,归属了短梗霉多糖的１Ｈ和１３Ｃ的全部化学位移     

铁皮石斛疫病及其病原菌

铁皮石斛疫病2001年发现在浙江义乌栽培田间,是由疫霉菌引起的。在田间,疫霉菌侵染茎基部,引起当年移植苗根腐、植株枯萎和死亡,但侵染2-3年植株幼嫩顶部仅引起顶枯症状。通过对病原菌形态学、交配型的观察,以及核糖体DNAITS序列分析,侵染铁皮石斛的5个分离菌株被鉴定为烟草疫霉菌Phytophthora nicotianae。致病性试验表明,铁皮石斛是烟草疫霉菌的寄主。     

石斛干品基因组DNA的提取与RAPD分析

市场中药干品的药性差异一直是影响中药标准化的瓶颈,而检测技术相对落后是导致这一现象的主要原因。DNA分子水平检测的困难是药材干品的基因组DNA难以提取。本文以铁皮石斛(Dendrobium candidum)干茎为材料,采用了四种方法从干品石斛中提取基因组DNA。结果表明,采用改良的CTAB法可从石斛干品尤其是干茎皮中提取质量较高的基因组DNA,其分子量大于23kb,以此DNA为模板进行不同引物的PCR扩增可获得清晰的RAPD条带。该研究初步建立了石斛干品合适的RAPD技术体系。