Bioprospecting of Saprobe Fungi from the Semi‐Arid North‐East of Brazil for the Control of Anthracnose on Sorghum

Anthracnose, caused by the hemiotrophic fungus Colletotrichum sublineolum, is one of the most important diseases affecting sorghum production worldwide. The main goal of this study was to select saprobe fungi from the semi‐arid north‐east of Brazil that could increase sorghum resistance to anthracnose and investigate this increased resistance at both physiological and biochemical levels. Plants were sprayed with Curvularia inaequalis, Gonytrichum macroladum, Memnoniella levispora, Pithomyces chartarum, Periconia hispidula, Phaeoisaria clematidia, Dictyochaeta heteroderae, Sarcopodium circinatum, Periconia byssoides, Moorella speciosa, Stachybotrys chartarum, Pseudobotrytis terrestres, Memnoniella echinata, Stachybotrys globosa and Gonytrichum clamydosporium 24 h before inoculation with C. sublineolum. Plants sprayed with water served as the control treatment. The area under the anthracnose progress curve was significantly reduced in comparison with the control treatment only for plants sprayed with C. inaequalis. Therefore, C. inaequalis was selected for physiological and biochemical evaluations. The peroxidases, chitinases and β‐1,3‐glucanases activities were significantly higher for plants sprayed with C. inaequalis and inoculated with C. sublineolum than for plants not sprayed with C. inaequalis and inoculated with C. sublineolum. There was no apparent decrease in the values of net carbon assimilation rate, stomatal conductance to water vapour or transpiration rate for plants sprayed with C. inaequalis and infected by C. sublineolum in comparison with plants not sprayed with C. inaequalis and infected by C. sublineolum. In conclusion, sorghum resistance against C. sublineolum infection was greatly potentiated by C. inaequalis without any apparent change in the photosynthetic capacity of the infected plants.     

Quantification of Yield Losses Due to Anthracnose Stalk Rot on Corn in Brazilian Conditions

The anthracnose stalk rot of corn (ASR), caused by Colletotrichum graminicola, is a major disease of this crop and occurs in most Brazilian regions where corn is grown. Despite its widespread occurrence, there are no estimates of the effect of ASR on the yield of corn under the Brazilian conditions. In this study, we evaluated the effect of ASR on corn hybrids yield. Two experiments were conducted (first crop 2007/2008 and second crop, 2009) in areas with a history of occurrence of leaf anthracnose and ASR. Five hybrids were evaluated in the first and second crops: AG1051, BRS 1001, BRS 1010, BRS 1035, P30F80 and BRS 1010, 2B710, P30F80, DKB390, BRS 1035, respectively. At harvest, we evaluated the incidence of plants with anthracnose stalk rot (IPASR), and we selected pairs of healthy and diseased plants to quantify the effect of ASR in the ear weight (EW), grain weight (GW) and the weight of a sample containing 100 kernels (W100). The IPASR was higher in the hybrid BRS 1010 (21.87 and 45.28%, first and second crops, respectively). The EW, GW and W100 were lower in diseased plants in all hybrids. The mean weight loss in the first season was EW 29.03%, GW 27.83% and W100 17.08%, and the second season was EW 27.75%, GW 25.60% and W100 16.99%. The most affected hybrids with weight loss in the first crop were AG1051 (EW 34.31%, GW 33.05%, W100 19.96%) and BRS 1035 (EW 34.74%, GW 34.65%, W100 22.31%). In the second crop, were P30F80 (EW 30.72%, GW 30.92%, W100 19.24%), DKB390 (EW 30.61%, GW 29.81%) and 2B710 (W100 19.27%). Corn yield was strongly affected by ASR.     

Significance of Microsclerotia in the Epidemiology of Black Pepper Anthracnose and an Approach for Disease Management in Nurseries

Anthracnose incited by Colletotrichum gloeosporioides (Penz.) Penz. and Sacc. is a wide spread and economically important disease of black pepper. In the present study, role of microsclerotia (MS) in the trans‐seasonal perpetuation of C. gloeosporioides was investigated. Microscopical examination of the runner shoots exhibiting necrotic lesions revealed the presence of dark, melanized structures which resembled MS. The excised necrotic regions when subjected to high humidity produced acervulus with setae. Under in vitro conditions, C. gloeosporioides produced MS predominantly on the aerial surface as inseparable congregations, enmeshed in the mycelial mats in potato dextrose broth and as individual units 7–8 days after incubation on glass slides. Sequential events in the formation of MS included germination of conidia, formation of conidial anastomosis tubes, aggregation of hyphae, and the formation of melanized microsclerotial bodies. Three types of microsclerotial germination were observed under in vitro conditions viz., sporogenic, myceliogenic and both. PCR confirmation with CgInt species‐specific primer and ITS4 resulted in 450‐bp amplification. Since, runner shoots are predominantly used as propagating material in black pepper, an approach was devised to manage anthracnose under nursery conditions by treating the 2‐ to 3‐node cuttings (nursery planting material) with carbendazim (12%)—mancozeb (63%) @ 0.1% for 30 min. The results of the study suggests a new facet in the disease cycle of black pepper anthracnose, indicating that the pathogen survives as microsclerotia in planta and could act as a potential source of inoculum.     

Effect of Zinc on the Development of Brown Spot in Rice

Brown spot, caused by the fungus Bipolaris oryzae, is one of the most destructive diseases of rice. This study investigated the effect of zinc rates on the development of brown spot in rice. Rice plants (cv. ‘Metica‐1′) were grown in hydroponic culture amended with Zn rates (applied as ZnSO₄^.7H₂O) of 0, 0.5, 1, 2 and 4 μm and inoculated with B. oryzae. The foliar concentration of Zn was determined. Leaf samples were assessed for disease severity, and then, area under brown spot progress curve (AUBSPC) was calculated. The relationship between Zn concentrations on leaf tissues and the rates of this micronutrient was best described by a positive linear regression model, while the relationship between the Zn rates and the AUBSPC was best described with a positive quadratic regression model. The correlation between Zn concentrations on leaf tissues and AUBSPC was positive and significant (r = 0.68, P < 0.05). The results from this study showed that high foliar concentration of Zn was associated with increasing rice susceptibility to brown spot.     

Differences in the Induction of Defence Responses in Resistant and Susceptible Muskmelon Plants Infected with Colletotrichum lagenarium

Defence reactions occurring in resistant (cv. Gankezaomi) and susceptible (cv. Ganmibao) muskmelon leaves were investigated after inoculating with Colletotrichum lagenarium. Lesion restriction in resistant cultivars was associated with the accumulation of hydrogen peroxide (H₂O₂). The activity of antioxidants catalase (CAT) and peroxidase (POD) significantly increased in both cultivars after inoculation, while levels of both CAT and POD activity were significantly higher in the resistant cultivar. Ascorbate peroxidase (APX) increased in both cultivars after inoculation, and level of APX activity was significantly higher in the resistant cultivar. Glutathione reductase (GR) activity significantly increased in both cultivars following inoculation, but was higher in the resistant cultivar, resulting in higher levels of ascorbic acid (AsA) and reduced glutathione (GSH). Phenylalanine ammonia lyase (PAL) significantly increased in inoculated leaves of both cultivars, resulting in higher levels of total phenolic compounds and flavonoids. The pathogenesis‐related proteins chitinase (CHT) and β‐1, 3‐glucanase (GLU) significantly increased following inoculation with higher activity in the resistant cultivar. These findings show that resistance of muskmelon plants against C. lagenarium is associated with the rapid accumulation of H₂O₂, resulting in altered cellular redox status, accumulation of pathogenesis‐related proteins, activation of phenylpropanoid pathway to accumulation of phenolic compounds and flavonoids.     

Anthracnose Caused by Colletotrichum horii on Sweet Persimmon in Korea: Dissemination of Conidia and Disease Development

Anthracnose disease caused by Colletotrichum horii (C. gloeosporioides), results in considerable economic damage to sweet persimmon in southern Korea yearly. This study deals with the life cycle of the pathogen in terms of seasonal fluctuations of spore dispersal and the development of disease based on field surveys, spore potential and fungal isolation. Anthracnose disease was observed first on twigs in the last week of May and reached an incidence of 1.2%. Subsequently, the disease increased rapidly and reached an incidence of 86% by the end of July. Infection of fruits started in mid‐June (2.8%) and increased gradually to 64.4% by the end of July. In severely infected orchards, 46.2% of diseased fruits were dropped. The pathogen began releasing conidia in the first week of May and continued until the end of September. The maximum release of spores was observed in mid‐July. To determine the optimal use of chemicals for control of anthracnose, the following spray programme was evaluated. Spraying two or three times resulted in 89.4 and 93% control, respectively, whereas spraying more than four times led to 100% control. In comparison, the disease rate of unsprayed trees was 89.8%. To control anthracnose effectively, it is recommended to take steps to eliminate inoculum sources in sweet persimmon orchards before spraying chemicals.     

Characterization and Pathogenicity of Colletotrichum truncatum Causing Stem Anthracnose of Red‐Fleshed Dragon Fruit (Hylocereus polyrhizus) in Malaysia

During August 2010 and January 2011, 10 isolates of Colletotrichum were recovered from stem anthracnose lesions of Hylocereus polyrhizus in the states of Kedah and Penang, Malaysia. Based on the morphological characteristics of colony colour and appearance, and shapes of conidia as well as sequences of internal transcribed spacer regions (ITS), β‐tubulin, actin (ACT) and glyceraldehyde 3‐phosphate dehydrogenase (GAPDH), the fungus was identified as Colletotrichum truncatum. Pathogenicity test showed that C. truncatum isolates were pathogenic to the artificially inoculated H. polyrhizus stem. This is the first report of C. truncatum causing anthracnose on H. polyrhizus stems in Malaysia.     

Quantification of yield losses caused by leaf anthracnose on sorghum in Brazil

The leaf anthracnose disease in sorghum, caused by Colletotrichum sublineolum (Henn. ex Sacc. & Trotter), is widely distributed throughout its Brazilian cultivation areas. The disease can cause significant losses in grain yield and quality. This study aimed to quantify the effects of leaf anthracnose on grain yield of different sorghum genotypes. Two elite inbred lines of sorghum, BR009 (susceptible) and BR008 (moderately resistant), and the hybrids, BR304 and MR43 (susceptible), BRS310 and DKB599 (moderately resistant) and BRS308 and AG1060 (resistant), were planted in a complete randomized block design with three replicates. The disease severity (DS) was evaluated weekly, starting from the onset of the first foliar symptoms, and yield losses were estimated using linear regression analysis. Leaf anthracnose significantly reduced sorghum yields in the susceptible genotypes. The highest yield loss of 86% was observed in the inbred line BR009, when the disease severity reached 100%. For the hybrids, the grain yield loss varied from 35% (BRS310) to 72% (BRS308). According to the adjusted model, a grain yield reduction of 23.48 kg/ha for BR304, 14.57 kg/ha for BRS310 and 15.91 kg/ha for DKB599 was observed for every 1% increase in disease severity. We demonstrate for the first time the effect of leaf anthracnose disease on grain sorghum yields under Brazilian conditions. The results from this study provide a starting point for developing new strategies for the integrated disease management of sorghum anthracnose.     

Interactions Between Rhizoctonia Root Rot and the Foliar Common Bean Diseases Anthracnose and Rust

The effects of co‐inoculation of Rhizoctonia solani and Colletotrichum lindemuthianum or Uromyces appendiculatus at different inoculum levels were studied on the disease dynamics and on the growth of bean plants under greenhouse conditions. Bean seeds were sown in R. solani‐infested soil. Additional experiments in which seedlings were transplanted to infested soil were also carried out. Conidial suspensions of C. lindemuthianum or uredospores of U. appendiculatus were inoculated onto leaves at plant developmental stages V2 and V3, respectively. Interactions between root rot and the aerial diseases were observed depending on the inoculum levels and on the timing of R. solani inoculation. Anthracnose severity tended to be higher on R. solani‐infected plants. Conversely, R. solani infection significantly reduced diameter of pustules and rust severity. When seedlings were transplanted to soil infested with low levels of R. solani, root rot severity and density of R. solani in the soil were magnified at high levels of C. lindemuthianum or U. appendiculatus. In these experiments, a synergistic interaction between root rot and anthracnose was observed to affect the plant dry weight. Antagonistic effects on the plant dry weight were found for the combination root rot/rust only when seeds were sown in infested soil.     

First Report of Anthracnose of Ledebouriella seseloides Caused by Colletotrichum gloeosporioides in Korea

In 2012, dark brown spots were observed on leaves of Ledebouriella seseloides (Fang Feng) in several research plots located at the Goseong Agricultural Research Extension services in Gyeongam Province, Republic of Korea. A fungus was isolated from the infected plants which produced pink‐coloured spores in mucilage on PDA and conidial morphology suggested that the causal agent was Colletotrichum gloeosporioides. Internal transcribed spacer sequences of the pathogen showed 99% identity to those of C. gloeosporioides. Pathogenicity of the isolate was proved by Koch's postulates. This is the first report of anthracnose in L. seseloides caused by C. gloeosporioides.     

Silicon and Triadimenol for the Management of Coffee Leaf Rust

This study documents an experiment that was undertaken in the 2006/2007, 2007/2008 and 2008/2009 growing seasons on Coffea arabica cv. ‘Catuaí Vermelho IAC 144’ that sought to evaluate the effects of various calcium silicate rates combined with the fungicide triadimenol on the incidence of coffee leaf rust. The experimental design was a randomized complete block in a split plot with five treatments (with varied calcium silicate rates and with or without triadimenol) and four replications. Each experimental unit (split plot) consisted of seven coffee plants (14 m²), which were the central five plants used for the evaluations. Calcium silicate (CS) and lime (L) were used according to the following mixtures (M): M1: 0% CS and 100% L; M2: 25% CS and 75% L; M3: 50% CS and 50% L; M4: 75% CS and 25% L; and M5: 100% CS and 0% L. The leaf Si concentration did not increase as CS rates increased in the soil. There was no reduction in the area under rust progress curve (AURPC) as the rates of CS increased in the soil. During the growing seasons 2006/2007, 2007/2008 and 2008/2009, rust incidence reached 94, 96 and 92% on plants that did not receive triadimenol, respectively, whereas the incidence did not exceed 6, 38 and 16%, respectively, for those plants that did. For yield, no interaction was observed between the calcium silicate rates and with or without triadimenol. The yield increased by 117% for plants receiving triadimenol compared with those that did not. The 3‐year experiments indicated that soil amendment with calcium silicate had no effect on either reducing coffee leaf rust incidence or increasing yield. Conversely, as expected, coffee leaf rust symptoms were dramatically reduced on plants sprayed with triadimenol, and this was accompanied by a significant gain in yield.     

Effect of Magnesium on the Development of Sheath blight in Rice

This study investigated the effect of magnesium (Mg) on sheath blight, caused by Rhizoctonia solani, development on rice plants from cultivars BR‐IRGA 409 and Labelle grown in nutrient solution containing 0.062, 0.125, 0.25 and 0.50 mm of Mg. Sheath blight progress on inoculated sheaths was evaluated by measuring lesions expansion (mm) at 24, 48, 72 and 96 h after inoculation. Data were used to calculate the area under lesion expansion progress curve (AULEPC). The relationship between the foliar Mg concentration and the Mg rates was quadratic. The Mg concentration on leaf sheaths tissue was highest at the Mg rates of 0.389 and 0.400 mm , respectively, for cultivars BR‐IRGA 409 and Labelle. A linear model best described the relationship between the AULEPC and the Mg rates. The AULEPC decreased by 48.7 and 26.2% for plants of cultivars BR‐IRGA 409 and Labelle, respectively, as the Mg rates in the nutrient solution increased. The results permitted to conclude that high foliar Mg concentration played a pivotal role to decrease sheath blight lesions expansion.     

Immunoassay‐based Techniques for Early and Specific Detection of Latent Postharvest Anthracnose in Mango

The postharvest anthracnose pathogen Colletotrichum gloeosporioides inciting latent or quiescent infection of mango was detected in early stages using immunoassay methods. Twenty‐five pathotypes isolated from different agroclimatic zones of Tamil Nadu, Karnataka and Pondicherry, India, revealed the variation in protein profile analysis (SDS‐PAGE). The polyclonal antibodies (PCA) were raised against the unfractioned mycelial protein (UMP) and a 40‐kDa polypeptide present in all pathotypes. Standardization of antigen and antiserum dilutions revealed that an antigen dilution of 1 : 200 (protein concentration of 20 μg/ml) and antiserum dilution of 1 : 100 (protein concentration of 40 μg/ml raised against UMP) and 1 : 200 (protein concentration of 20 μg/ml raised against 40 kDa polypeptide) was found to be optimum for the detection of anthracnose pathogen. Both antisera detected the C. gloeosporioides antigen in enzyme‐linked immunosorbent assays (ELISAs), dot immunobinding assays (DIBAs) and Western blots. The specificity in reaction was compared by isolating other Colletotrichum spp. from various hosts viz., C. lindemuthianum (beans), C. falcatum (sugarcane), C. musae (banana), C. capsici (chillies) and Botryodiplodia theobromae (mango). The antisera generated against UMP revealed the cross‐reaction with other host isolates and mango stem end rot pathogen (B. theobromae). The PCA raised against 40‐kDa polypeptide exhibited the specific reaction with C. gloeosporioides isolates in all the immunoassay techniques. By utilizing both PCA, the presence of latent infection was observed in healthy‐looking leaves, flowers and fruits in orchard conditions. The fruit tissues recorded high absorbance values followed by flowers and leaves in all the detection methods. The ELISA technique was also useful in assessing the pathogen inoculum at various biocontrol formulations sprayed mango trees under field conditions. The fluorescent pseudomonad strains mixture (KFP1 + FP7) amended with chitin sprayed at 30‐day intervals revealed the significant reduction in pathogen load than other formulations and unsprayed control.     

Genetic Diversity and Pathogenic Variability of Colletotrichum truncatum Causing Anthracnose of Pepper in Malaysia

Colletotrichum truncatum was initially described from pepper and has been reported to infect 180 host genera in 55 plant families worldwide. Samples were collected from pepper plants showing typical anthracnose symptoms. Diseased samples after isolation were identified as C. truncatum based on morphological characters and ITS‐rDNA and β‐tubulin sequence data. Intersimple sequence repeat (ISSR) markers were used to estimate genetic diversity in C. truncatum from Malaysia. A set of 3 ISSR primers revealed a total 26 allele from the amplified products. Cluster analysis with UPGMA method clustered C. truncatum isolates into two main groups, which differed with a distance of 0.64. However, the genetic diversity of C. truncatum isolates showed correlation between genetic and geographical distribution, but it failed to reveal a relationship between clustering and pathogenic variability. Phylogenetic analyses discriminated the C. truncatum isolates from other reference Colletotrichum species derived from GenBank. Among the morphological characters, shape, colour of colony and growth rate in culture were partially correlated with the ISSR and phylogenetic grouping. Pathogenicity tests revealed that C. truncatum isolates were causal agents for pepper anthracnose. In the cross‐inoculation assays, C. truncatum isolates were able to produce anthracnose symptoms on tomato, eggplant, onion, lettuce and cabbage. A pathogenicity and cross‐inoculation studies indicated the potential of C. truncatum for virulence and dominancy on plant resistance.     

Model plant systems in salinity and drought stress proteomics studies: a perspective on Arabidopsis and Sorghum

More than a decade after the sequencing of its genome, Arabidopsis still stands as the epitome of a model system in plant biology. Arabidopsis proteomics has also taught us great lessons on different aspects of plant growth, development and physiology. Without doubt our understanding of basic principles of plant biology would not have been this advanced if it were not for knowledge gained using Arabidopsis as a model system. However, with the projections of global climate change and rapid population growth, it is high time we evaluate the applicability of this model system in studies aimed at understanding abiotic stress tolerance and adaptation, with a particular emphasis on maintaining yield under hot and dry environmental conditions. Because of the innate nature of sorghum's tolerance to drought and moderate tolerance to salinity stresses, we believe sorghum is the next logical model system in such studies amongst cereals. In this acute view, we highlight the importance of Arabidopsis as a model system, briefly discuss its potential limitations in drought and salt stress studies, and present our views on the potential usefulness of sorghum as a model system for cereals in drought and salinity stress proteomic studies.     

First Report of Dragon Fruit (Hylocereus undatus) Anthracnose Caused by Colletotrichum truncatum in China

Anthracnose disease was detected from dragon fruit (Hylocereus undatus) at a market of Yuanjiang County, Yunnan Province, China. The results of pathogenicity test, morphology studies and sequence analyses based on ITS and β‐tubulin loci indicated that the disease was caused by Colletotrichum truncatum. The pathogen produced elliptic, yellow spots with chlorotic halos on the surface of the fruit, and the lesion become depressed gradually. Grey to black acervuli appeared on the lesion surface in concentric circles later. This is the first report of dragon fruit anthracnose caused by this pathogen in China.     

Diversity of Rice yellow mottle virus in Benin and Togo and Screening for Resistant Accessions

Surveys were conducted in rice fields in Benin, Cote d'Ivoire, Mali, Nigeria, Togo and Niger to assess the importance of Rice yellow mottle virus (RYMV). Diseased leaf samples were collected. In Togo, surveys were made mainly in the southern part of the country, and in Benin, all areas where rice is grown were covered. Leaf samples were serologically confirmed by ACP ELISA as bearing RYMV, propagated and all conserved. One hundred and forty‐eight (148) Beninese and 27 Togolese strains were serotyped. They were also phenotyped on three susceptible accessions including IR 64, four resistant lines with known alleles on RYMV 1 gene namely TOG 5681 (rymv 1‐3), TOG 5672 (rymv 1‐4 and RYMV 2), TOG 5674 (rymv 1.5) and Gigante (rymv 1‐2). RYMV spots with 9–100% incidences were identified. Serotyping by triple antibody sandwich (TAS) ELISA indicated that two main groups S1 and S2 coexisted in Benin with S1 being prevalent. In Togo, 26 strains were S1 and only one was S2. Phenotyping of the 148 Beninese and 27 Togolese indicated that they all attacked the three susceptible accessions, while TOG 5681 (rymv 1‐3), TOG 5672 (rymv 1‐4 and RYMV 2), TOG 5674 (rymv 1‐5) and Gigante (rymv 1‐2) remained symptomless. The use of the genes/alleles above in these countries against the disease is discussed. Three representative Beninese strains were selected to screen 48 accessions for disease resistance. Nine accessions were as susceptible as IR 64 to all strains while six (NERICA 9, NERICA 12, NERICA 13, TOG 7291, WAB56‐50, CG 14 and Moroberekan) were very resistant. Susceptibility of the six ARICA and resistance of some NERICA lines could be explained by the fact that one or both parental lines were, respectively, susceptible or resistant to the strains.     

Effect of Sowing Time on Development of Safflower Anthracnose Disease and Degree of Resistance in Various Cultivars

Field experiments were conducted under natural as well as under vinyl house conditions to determine the effect of sowing time on development of anthracnose of safflower caused by Colletotrichum acutatum, and to determine the level of resistance of seven cultivars. When crops were sown from March 1 to April 1; safflower anthracnose disease (SAD) incidence was low and increased slowly (0.7–10.9%) throughout the growing season. When sowing was delayed to April 15, disease incidence ranged between 29.5 and 48.5% from late May to July. Similarly, SAD severity and its severity index were higher (3.5 and 3.3, respectively) in plots sown on April 15 than in the plots sown from March 1 to April 1 (1.9–2.4 and 1.8–2.2, respectively). In contrast under vinyl houses that sheltered from rain, sowing time did not affect neither SAD, nor severity and severity index, which were 5.7–6.4%, 1.5–1.7 and 1.5–1.7, respectively. Among seven cultivars tested for resistance to SAD, Uisong‐1, China‐2 and India were highly susceptible (80–97%) under natural conditions followed by China‐1, Uisan, Uisong‐7 and Cheongsu (27–35%); however, under vinyl house conditions, SAD was lower (5.7–8.2%) and there was no significant difference between cultivars.