Potential plant genetic resources of the New Zealand flora

New Zealand harbours a highly endemic flora of some 2000 species of vascular plants, but except for numerous ornamentals, only four indigenous plants are cultivated for the production of fibre (Phormium tenax, pharmaceutical properties (Solanum laciniatum andS. aviculare), and as a vegetable (Tetragonia tetragonioides). Another 15 native species are relatives of common commercial plants and are considered potential genetic resources. Of the six early Polynesian plant introductions to New Zealand, only the kumara (sweet potato) is still of some economic importance today.     

Unexpectedly Diverse Mesorhizobium Strains and Rhizobium leguminosarum Nodulate Native Legume Genera of New Zealand, while Introduced Legume Weeds Are Nodulated by Bradyrhizobium Species

The New Zealand native legume flora are represented by four genera, Sophora, Carmichaelia, Clianthus, and Montigena. The adventive flora of New Zealand contains several legume species introduced in the 19th century and now established as serious invasive weeds. Until now, nothing has been reported on the identification of the associated rhizobia of native or introduced legumes in New Zealand. The success of the introduced species may be due, at least in part, to the nature of their rhizobial symbioses. This study set out to address this issue by identifying rhizobial strains isolated from species of the four native legume genera and from the introduced weeds: Acacia spp. (wattles), Cytisus scoparius (broom), and Ulex europaeus (gorse). The identities of the isolates and their relationship to known rhizobia were established by comparative analysis of 16S ribosomal DNA, atpD, glnII, and recA gene sequences. Maximum-likelihood analysis of the resultant data partitioned the bacteria into three genera. Most isolates from native legumes aligned with the genus Mesorhizobium, either as members of named species or as putative novel species. The widespread distribution of strains from individual native legume genera across Mesorhizobium spp. contrasts with previous reports implying that bacterial species are specific to limited numbers of legume genera. In addition, four isolates were identified as Rhizobium leguminosarum. In contrast, all sequences from isolates from introduced weeds aligned with Bradyrhizobium species but formed clusters distinct from existing named species. These results show that native legume genera and these introduced legume genera do not have the same rhizobial populations.     

The genus Calycidium Stirt.

Abstract:The lichen genus Calycidium Stirt. (Calycidiaceae,Lecanorales , ‘Caliciales’ s. lat.) contains two species: C. cuneatum Stirt., distributed in Australia (Tasmania) and New Zealand, and C. polycarpum (Colenso) Wedin, comb. nov., distributed in Argentina, Australia (Tasmania), Chile and New Zealand. The morphology, chemistry, ecology and distribution of the two species is discussed, as is the taxonomic position of the genus. Calycidium is reported as new to Argentina.     

Molecular evidence for long-distance dispersal in the New Zealand pteridophyte flora

Aim To examine the relative importance of long‐distance dispersal in shaping the New Zealand pteridophyte (ferns and lycophytes) flora and its relationships with other floras, with the null hypothesis that the extant New Zealand pteridophyte flora has been isolated since New Zealand’s separation from Gondwana. Location New Zealand. Methods rbcL DNA sequences were assembled for 31 New Zealand pteridophyte genera, with each genus represented by one New Zealand species and the most closely related non‐New Zealand species for which data were available. Maximum‐likelihood, maximum‐parsimony, and Bayesian analysis phylograms were constructed and used as input for r 8s molecular dating, along with 23 fossil calibrations. Divergence estimates less than conservatively recent ages for New Zealand’s geological isolation, namely H_o > 30 Ma for pairs involving New Caledonian and Norfolk Island species and H_o > 55 Ma for all others, were taken as rejection of the null hypothesis. Results The null hypothesis was rejected for all pairs except, under some parameter conditions, for those involving the New Zealand species Cardiomanes reniforme, Lindsaea trichomanoides, Loxsoma cunninghamii, Lygodium articulatum, Marattia salicina, and Pteris comans. However, the Lindsaea and Pteris results probably reflect the absence in the analyses of closely related non‐New Zealand samples, while the Marattia divergence was highly contingent on which fossil calibrations were used. Main conclusions Rejection of the null hypothesis for the majority of pairs implies that the extant New Zealand lineage has undergone long‐distance dispersal either into or out of New Zealand. The notion of a long isolation since geological separation can, therefore, be dismissed for much of New Zealand’s pteridophyte flora. The analyses do not identify the direction of the long‐distance dispersal, and these New Zealand lineages could have had vicariant origins with subsequent long‐distance emigration. However, the alternative that many extant New Zealand pteridophyte lineages only arrived by long‐distance immigration after geological isolation seems likely.     

Synopsis of Grimmia Hedw. in New Zealand,including Grimmia wilsonii sp. nov.

Abstract

The New Zealand Grimmia Hedw. specimens from AK, AKU, BM, CHR, OTA and WELT have been revised and a bryological field trip to the New Zealand Southern Alps was made to study specimens in their natural habitats. As a result of the revision and the field trip, G. anodon, G. austrofunalis, G. orbicularis and G. tortuosa were added to the moss flora. A key is presented, the species are briefly discussed and Grimmia wilsonii H.C. Greven sp. nov. is described and illustrated.     

New Zealand Eocene,Oligocene and Miocene Macrofossil and Pollen Records and Modern Plant Distributions in the Southern Hemisphere

The modern New Zealand flora has a relatively low number of families and genera in relation to land area, but well-preserved macrofossils and pollen from three sites in southern New Zealand suggest that the floras in Eocene, Oligocene and Miocene times were much more diverse at the generic level. At Pikopiko, Southland, a late Eocene in situ forest with fern understory was dominated by conifers, Casuarinaceae, Lauraceae, Nothofagus, Proteaceae, and mesothermal angiosperms including palms (aff. Calamus), Sapindaceae: Cupaniae and Picrodendraceae. At Newvale Mine, Southland, a leaf bed within a thick lignite seam represents leaf fossils preserved in a late Oligocene oligotrophic bog. This site demonstrates that Agathis, Dacrycarpus, Dacrydium, Halocarpus, Microcachrys, Podocarpus and Phyllocladus coexisted with diverse angiosperms including Nothofagus, Gymnostoma, Cunoniaceae, Ericaceae, Sapindaceae and several Proteaceae. Pollen data add Meliaceae, Myrtaceae, Onagraceae and Rubiaceae to the flora. At Foulden Maar, Otago, mummified leaves and flowers, including several with in situ pollen, demonstrate the existence of a diverse flora surrounding an Early Miocene lake. This site contains numerous monocot macrofossils including Astelia, Cordyline, Ripogonum and Typha, as well as the oldest fossils known for Orchidaceae and Luzuriagaceae. This flora was dominated by Lauraceae with affinities to Cryptocarya and Litsea, but other families include Araliaceae, Cunoniaceae, Elaeocarpaceae, Euphorbiaceae sensu lato, Menispermaceae, Myrsinaceae, Myrtaceae, Onagraceae, Proteaceae and Sterculiaceae. Many ferns, conifers, and Nothofagus are from lineages with Gondwanan ancestors, whereas other taxa show links to Australia (e.g., Gyrostemonaceae), New Caledonia (e.g., Beauprea) and South America (e.g., Luzuriaga, Fuchsia). Many of these taxa are now extinct in New Zealand, and therefore indicate much wider biogeographic ranges for many families and genera in the past.     

New mites Terraphagus antipodus gen. n., sp. n. and Neohyadesia minor sp. n. (Acarina: Astigmata: Algophagidae) from islands of the Southern Ocean

Mites are a diverse and important component in the soils of the Southern Ocean islands, but for many groups, their taxonomy and biogeography is little studied. This paper reports the Algophagidae, a poorly known family, from the New Zealand region for the first time. The study used soil samples from seabird burrows, brackish algal wrack samples and a museum collection to recover specimens. Terraphagus antipodus gen. n., sp. n. is described from grey petrel Procellaria cinerea burrow soil on the Antipodes Islands, New Zealand. The axillary organ is confined to the dorsum; the epigynal apodeme ends are fused with the ends of coxal apodeme II; seta 2a and ω2 are absent, and the famulus is bilobed. Males have the sternum fused to coxal apodemes II; the tarsal setae of legs I, III and IV of the male are modified for mate guarding. The short stout legs I and II end in huge spines in females as e, d, q, s, wa and hT. From brackish algal wrack, Lake Forsyth/Wairewa, Canterbury, New Zealand, another algophagid Neohyadesia minor sp. n. is described and illustrated. The new species is the smallest known algophagid. A neohyadesid collected in 1961 is newly reported here from Eudyptes sp. penguin rookery mud from North Head, Macquarie Island. These records further extend the known microhabitats of the family to the allochthonous marine seabird nutrient flow into islands in the New Zealand region and make Neohyadesia Hughes and Goodman, 1969 present in all Southern Ocean provinces.     

Mnioloma fuscum (Marchantiopsida: Calypogeiaceae), an unexpected addition to the indigenous flora of New Zealand

Abstract

Mnioloma fuscum, a liverwort species known to date primarily from tropical-montane regions, is reported for New Zealand for the first time. Its occurrence in New Zealand is unexpected as the next nearest known site is believed to be the Solomon Islands, some 3500 km distant. The occurrence of Mnioloma fuscum in New Zealand highlights the contribution tropical regions have made to the composition of New Zealand's hepatic flora.     

Ancient DNA Resolves Identity and Phylogeny of New Zealand's Extinct and Living Quail (Coturnix sp.)

Background

The New Zealand quail, Coturnix novaezealandiae, was widespread throughout New Zealand until its rapid extinction in the 1870''s. To date, confusion continues to exist concerning the identity of C. novaezealandiae and its phylogenetic relationship to Coturnix species in neighbouring Australia, two of which, C. ypsilophora and C. pectoralis, were introduced into New Zealand as game birds. The Australian brown quail, C. ypsilophora, was the only species thought to establish with current populations distributed mainly in the northern part of the North Island of New Zealand. Owing to the similarities between C. ypsilophora, C. pectoralis, and C. novaezealandiae, uncertainty has arisen over whether the New Zealand quail is indeed extinct, with suggestions that remnant populations of C. novaezealandiae may have survived on offshore islands.

Methodology/Principal Findings

Using fresh and historical samples of Coturnix sp. from New Zealand and Australia, DNA analysis of selected mitochondrial regions was carried out to determine phylogenetic relationships and species status. Results show that Coturnix sp. specimens from the New Zealand mainland and offshore island Tiritiri Matangi are not the New Zealand quail but are genetically identical to C. ypsilophora from Australia and can be classified as the same species. Furthermore, cytochrome b and COI barcoding analysis of the New Zealand quail and Australia''s C. pectoralis, often confused in museum collections, show that they are indeed separate species that diverged approximately 5 million years ago (mya). Gross morphological analysis of these birds suggests a parallel loss of sustained flight with very little change in other phenotypic characters such as plumage or skeletal structure.

Conclusion/Significance

Ancient DNA has proved invaluable for the detailed analysis and identification of extinct and morphologically cryptic taxa such as that of quail and can provide insights into the timing of evolutionary changes that influence morphology.     

New species and records of Stigmaeidae (Acari: Prostigmata) from New Zealand - ID. Genus Stigmaeus Koch

Abstract

Stigmaeus arboricola, S. montanus, S. luxtoni, and S. novazealandicus are described as new species, and the larva of S. loadmani is described. Several new records are noted, and a key is given to the New Zealand species of Stigmaeus.     

Welcome back New Zealand: regional biogeography and Gondwanan origin of three endemic genera of mite harvestmen (Arachnida, Opiliones, Cyphophthalmi)

Aim Biogeographers have long been intrigued by New Zealand’s biota due to its unique combination of typical ‘continental’ and ‘island’ characteristics. The New Zealand plateau rifted from the former supercontinent Gondwana c. 80 Ma, and has been isolated from other land masses ever since. Therefore, the flora and fauna of New Zealand include lineages that are Gondwanan in origin, but also include a very large number of endemics. In this study, we analyse the evolutionary relationships of three genera of mite harvestmen (Arachnida, Opiliones, Cyphophthalmi) endemic to New Zealand, both to each other and to their temperate Gondwanan relatives found in Australia, Chile, Sri Lanka and South Africa. Location New Zealand (North Island, South Island and Stewart Island). Methods A total of 94 specimens of the family Pettalidae in the suborder Cyphophthalmi were studied, representing 31 species and subspecies belonging to three endemic genera from New Zealand (Aoraki, Neopurcellia and Rakaia) plus six other members of the family from Chile, South Africa, Sri Lanka and Australia. The phylogeny of these taxa was constructed using morphological and molecular data from five nuclear and mitochondrial genes (18S rRNA, 28S rRNA, 16S rRNA, cytochrome c oxidase subunit I and histone H3, totalling c. 5 kb), which were analysed using dynamic as well as static homology under a variety of optimality criteria. Results The results showed that each of the three New Zealand cyphophthalmid genera is monophyletic, and occupies a distinct geographical region within the archipelago, grossly corresponding to palaeogeographical regions. All three genera of New Zealand mite harvestmen fall within the family Pettalidae with a classic temperate Gondwanan distribution, but they do not render any other genera paraphyletic. Main conclusions Our study shows that New Zealand’s three genera of mite harvestmen are unequivocally related to other members of the temperate Gondwanan family Pettalidae. Monophyly of each genus contradicts the idea of recent dispersal to New Zealand. Within New Zealand, striking biogeographical patterns are apparent in this group of short‐range endemics, particularly in the South Island. These patterns are interpreted in the light of New Zealand’s turbulent geological history and present‐day patterns of forest cover.     

Cephaloziella tahora Bever. & Glenny,a new species of Cephaloziella (Jungermanniopsida,Cephaloziellaceae) from eastern Taranaki,New Zealand

Cephaloziella tahora, a new species of Cephaloziella is described and illustrated from a lowland forest habitat in eastern Taranaki in the North Island of New Zealand. It has similarities to six other New Zealand species of Cephaloziella, and appears closest in New Zealand to Cephaloziella aenigmatica R.M.Schust. It is defined by a unique combination of features and distinguished from C. aenigmatica and other New Zealand species by having entire, distant leaves that reach the dorsal stem mid-line, and have large conspicuous hemispherical and hemi-ellipsoidal papillae, underleaves on gemmiparous and gynoecial shoots, and by its dioecy. The addition brings the number of New Zealand species of Cephaloziella to 18, 12 of which are endemic to New Zealand.     

Siteroptes (Siteroptoides) species with Pediculaster-like phoretomorphs (Acari: Tarsonemida: Pygmephoridae) from New Zealand and Polynesia

Abstract

Six species of Siteroptes subgenus Siteroptoides—kneeboni (Wicht), mesembrinae (Canestrini), microsaniae n.sp., morelliae (Rack), muscarius n.sp., and portatus n.sp.—have been found in New Zealand. S. (S.) mesembrinae occurs on Niue Island also, and a further new species, pacificus, is recorded from Tonga. The phoretomorph females of all 7 species, the normal females of 4, the males of 3, and larvae of 2 are described and compared. The similarities and differences between normal and phoretomorph females are particularly noted. Besides kneeboni, 2 species described by Wicht but not occuring in New Zealand—athiasae and flechtmanni— are redescribed from type material and transferred to Siteroptes (Siteroptoides). Keys are given for normal females and Pediculaster-like phoretomorph females of Siteroptoides. Siteroptes mesembrinae subsimilis and S. ignotus altaicus are raised to species status. Diagnostically important measurements are given to help define the variation within and between species and morphs.     

Vegetative Anatomy of Uncinia (Cyperaceae)

The vegetative anatomy of 18 (19) Uncinia spp. (Cyperaceae-Cariceae)including representatives of most taxonomic subdivisions wasstudied to determine the range of variation in certain anatomicaland morphological characters of the vegetative organs withinthe genus. The two South American species U. erinacea and U. kingii differfrom all others, the former in having a closed cylinder of sclerenchymain the culm, and the latter a grooved culm. The three tall SouthAmerican spp., U. brevicaulis, U. hamata, and U. phleoides var.trichocarpa, are characterized by adaxial intercostal fibrestrands in the leaves, and in this respect show affinities withtall New Zealand species, U. sinclairii and U. uncinata. Thelast species does not have the intercostal strands. The muchsmaller U. tenuis from S. America resembles, in the size andshape of transverse sections of leaf and culm, a group of speciesfrom New Zealand comprising U. angustifolia, U. egmontiana,and U. rupestris. To these could be added U. banksii, U. hookeri,and perhaps also U. tenella, although the last two spp. exhibitsome distinctive characters in the transverse section of theleaf and also in the leaf epidermis in surface view. No exactcounterpart to the Australian and New Zealand spp. U. divaricata,U. riparia, U. rubra and U. scabra was found amongst the S.American material. This group of spp. is distinctive, for example,because of the triangular or irregularly triangular shape oftransverse sections of the culm and the large amount of sclerenchymain transverse sections of the leaf. The range of structural variation appears to be particularlywide in the S. American spp., which represent two extreme typesin the shape of the leaf in transverse section. The other talland small species have their respective counterparts in eacharea, although they are more profusely represented in New Zealandthan in America, and therefore show a correspondingly greaterrange of structure.     

Echoes of a flood pulse: short-term effects of record flooding of the Illinois River on floodplain lakes under ecological restoration

Until recently, only one native and three apparently introduced Daphnia species were known from New Zealand. We demonstrate that (1) Daphnia in subalpine habitats in southern New Zealand differ morphologically and genetically from the native taxon previously labelled Daphnia carinata to merit species nova status and (2) the name of the latter should revert to D. thomsoni, used by Sars (1894) for Daphnia described from New Zealand mud. We compare some key characteristics and cytochrome c oxidase subunit 1 (CO1) sequences of the New Zealand native and other morphologically similar species. Distinctive characteristics of subalpine populations, described as Daphnia tewaipounamu sp. nov., are a wide cephalic shield with lateral flanges curving dorsally via rounded fornices, dorsal cervical depression variably expressed as a ‘step’ in the cephalic shield exuviae and retention of ephippia within shed carapace exoskeletons long after ecdysis. CO1 sequences revealed that D. tewaipounamu sp. nov. belongs to the D. carinata complex but is highly divergent (>14%) from other known members of this complex. New Zealand D. thomsoni is divergent (>15%) from D. carinata s.s. However, it is not endemic to New Zealand, as we confirmed its presence in Tasmania, and some Australian populations are closely related to it.     

Notes on the diet of seven grenadier fishes (Macrouridae) from the lower continental slope of Chatham Rise, New Zealand

Diets of 8 rarely sampled species of grenadiers were examined from the lower continental slope (1178 to 1837 m) on Chatham Rise, New Zealand and includes the first known records of the diet of Bathygadus cottoides, Coryphaenoides mcmillani, C. murrayi, and Idiolophorhynchus andriashevi. Most species fed benthopelagically on small crustaceans, e.g., calanoid copepods, amphipods and mysids and others.     

New high latitude Capnuchosphaera species (Triassic Radiolaria) from Waipapa Terrane,New Zealand

Two new species and one new subspecies of genus Capnuchosphaera, (Capnuchosphaera tumida nov. sp., C. waihekeensis nov. sp. and C. texensis australis nov. ssp.) are described herein from phosphatic nodules included in mudstone and sandstone beds of the Waipapa Terrane, Waiheke Island, New Zealand. The phosphatic nodules yielded a rich Late Triassic (Carnian-Norian) radiolarian fauna, with a high abundance of spumellarian taxa including numerous species of the genera Capnuchosphaera, Vinassaspongus, Kahlerosphaera, Sarla and Dumitricasphaera. Waiheke Island Capnuchosphaera are characterized by a large cortical shell and a distinctively low ratio of spine length to cortical shell diameter. These features differ significantly from those of Capnuchosphaera in the Tethyan Realm and are considered to be the result of adaptation to an Austral-New Zealand peripheral ocean of Gondwanaland in the Mesozoic Southern Hemisphere.