The role of microorganisms in mobilization and fixation of phosphorus in sediments

Cycling of phosphorus (P) at the sediment/water interface is generally considered to be an abiotic process. Sediment bacteria are assumed to play only an indirect role by accelerating the transfer of electron from electron donors to electron acceptors, thus providing the necessary conditions for redox-and pH-dependent, abiotic sorption/desorption or precipitation/dissolution reactions. Results summarized in this review suggest that

1. in eutrophic lakes, sediment bacteria contain as much P as settles with organic detritus during one year
2. in oligotrophic lakes, P incorporated in benthic bacterial biomass may exceed the yearly deposition of bioavailable P several times
3. storage and release of P by sediment bacteria are redox-dependent processes
4. an appreciable amount of P buried in the sediment is associated with the organic fraction
5. sediment bacteria not only regenerate PO₄, they also contribute to the production of refractory, organic P compounds, and
6. in oligotrophic lakes, a larger fraction of the P settled with organic detritus is converted to refractory organic compounds by benthic microorganisms than in eutrophic lakes.

From this we conclude that benthic bacteria do more than just mineralize organic P compounds. Especially in oligotrophic lakes, they also may regulate the flux of P across the sediment/water interface and contribute to its terminal burial by the production of refractory organic P compounds.     

Nitrogen limitation on land and in the sea: How can it occur?

The widespread occurrence of nitrogen limitation to net primary production in terrestrial and marine ecosystems is something of a puzzle; it would seem that nitrogen fixers should have a substantial competitive advantage wherever nitrogen is limiting, and that their activity in turn should reverse limitation. Nevertheless, there is substantial evidence that nitrogen limits net primary production much of the time in most terrestrial biomes and many marine ecosystems. We examine both how the biogeochemistry of the nitrogen cycle could cause limitation to develop, and how nitrogen limitation could persist as a consequence of processes that prevent or reduce nitrogen fixation. Biogeochemical mechansism that favor nitrogen limitation include:

the substantial mobility of nitrogen across ecosystem boundaries, which favors nitogen limitation in the “source” ecosystem — especially where denitrification is important in sediments and soils, or in terrestrial ecosystems where fire is frequent;

differences in the biochemistry of nitrogen as opposed to phosphorus (with detrital N mostly carbon-bonded and detrital P mostly ester-bonded), which favor the development of nitrogen limitation where decomposition is slow, and allow the development of a positive feedback from nitrogen limitation to producers, to reduced decomposition of their detritus, and on to reduced nitrogen availability; and

other more specialized, but perhaps no less important, processes.

A number of mechanisms could keep nitrogen fixation from reversing nitrogen limitation. These include:

energetic constraints on the colonization or activity of nitrogen fixers;

limitation of nitrogen fixers or fixation by another nutrient (phosphorus, molybdenum, or iron) — which would then represent the ultimate factor limiting net primary production;

other physical and ecological mechanisms.

The possible importance of these and other processes is discussed for a wide range of terrestrial, freshwater, and marine ecosystems.     

An ecological study of three freshwater ponds of hyderabad-India III. The phytoplankton (Volvocales,Chlorococcales, and Desmids)

The present paper deals with the ecological behaviour of green algae (Volvocales, Chlorococcales and desmids) of certain freshwater ponds, studied over a period of two years. The distributional patterns and periodicity of the various forms were compared with the changes in chemical constituents of water. The following conclusions were drawn.

1. Volvocales preferred eutrophic waters having high salt content. Their periodicity was possibly dependent upon the concentrations of nitrates and phosphates.
2. Chlorococcales were present in both, the calcium-rich and Calcium-poor ponds but the species composition was totally different from each other.
3. The ecology of desmids was possibly linked with the iron content and Divalent Monovalent ratio of water.

     

The distribution ofActinocyclus normanii (Bacillariophyceae) in estuaries: Field observations and laboratory investigations

Combining the results of field observations from the Eider, Elbe, Weser and Ems estuaries and laboratory experiments it was found that:

1. in German North Sea estuaries the tidal freshwater reaches are the main habitat of the diatomActinocyclus normanii.
2. the residence time within the tidal freshwater reaches is a key factor controlling not only seasonal and spatial densities within one estuary, but also density differences between estuaries;
3. A. normanii is well adapted to strongly changing light situations and thus adapted to estuaries with high vertical turbulent mixing and low values of Zeu/Zmix;
4. the downstream limit of the habitat ofA. normanii is mainly determined by light limitation rather than by hyperosmotic stress.

     

The use of a continuous assay system to show the stimulation of phosphoenolpyruvate production in intact mitochondria by valinomycin and by Mn2+

1. A method for the direct recording of the PEP efflux from isolated mitochondria is described.
2. This method has been used to show the stimulation of PEP efflux by externally added Mn⁺⁺ ions.
3. Valinomycin, uncoupler and oleate were also shown to stimulate PEP efflux.
4. Valinomycin caused an increase in the internal concentration of both PEP and citrate.
5. The results indicate that the major pathway of PEP synthesis in isolated mitochondria is via PEP carboxykinase and the results do not call for an unknown pathway of metabolism.
6. Two interactions between PEP and citrate are described; competition for the mitochondrial interior and the stimulation of PEP production by citrate.

     

Experimental problems using electronic particle counters

The following scheme lists the problems which have been and will continue to be encountered in grazing experiments on natural particle assemblages. In some cases there are solutions, but many of the problems listed below remain intractable. To solve them will require innovative approaches, most probably combining the use of particle counters with other techniques to approach the problem to be solved from several angles at once. Variance between samples due to

- statistical causes (especially caused by large particles) and

- differences between experimental bottles and between experimentals and controls at start of experiment. Shifts in particle distribution during experiment due to

- increase in small particles

- growth of bacteria and other organisms due to excretion of grazers and

- breakage during handling by grazers into fragments. Processes, independent of grazing, leading to changes in particle size distribution due to

- primary production

- grazing by additional components and

- bacterial growth on detrital particles and the formation of detrital flocs.

     

Effects of the discharge of thermal effluent from a power station on Lake Wabamun,Alberta, Canada — The epipelic and epipsamic algal communities

1. The epipelic algal standing crops were increased by the discharge of thermal effluent into Lake Wabamun, particularly in the discharge canal at station (03–04) and 05.
2. The increase in the standing crop size of the epipelon was due to Oscillatoria amoena and O. borneti in the heated area, while the discharge canal provided the inoculum of the algae for the heated area of the lake.
3. At station (03–04) the increased standing crop size was also a function of increased light penetration to the sediment due to the heated effluent keeping an area of the lake free of ice during the winter.
4. The species composition of the diatoms was similar at all stations except in the discharge canal where there was a reduction in the number of diatom species.
5. Navicula cuspidate developed best in the discharge canal in the summer where water temperatures of 31°C were recorded.
6. Amphora ovalis var. pediculus was the dominant diatom species during the winter under ice-cover.
7. The heated effluent had no effect upon the standing crop or species composition of the epipsammon.
8. Results obtained from the sediment core study showed that the shallow littoral zone of the lake is very disturbed due to wind-induced wave action.

     

Succession in Zoo- and phytoplankton in a sewage stabilization pond

The investigations pertaining to zoo- and phytoplankton succession during prestabilization and stabilization of domestic waste water in a facultative pond operating at 1.22 meters depth with an average BOD loading of 336.3 kg per hectare per day and a retention period of 10 days revealed the following:

1. A photosynthetic sulphur bacterium Thiocystis violacea has been recorded during the second and third day along with a considerable population of ciliate protozoa and algae.
2. Chlorophytes were followed by euglenoids in the ecological succession and the latter became predominant after the pond stabilized.
3. Of the twelve protozoan species Halteria grandinella, Bursaria truncatella and Perispira ovum were associated with peaks of algae and vigorous photosynthesis in the stabilized pond water.
4. There ia a gradual improvement in the quality of the waste water with respect to reduction in bacteria and biochemical oxygen demand and enhancement in changes in physico-chemical factors till a relatively stable community is evolved.

     

The use of toxicokinetics for the safety assessment of drugs acting in the brain

Pharmacological and toxicological studies undertaken on drugs that affect the brain are frequently performed in disparate species under various experimental conditions, at doses often greatly in excess of those expected to be administered to humans, and the findings are extrapolated implicitly or explicitly with scant regard to differences in the biodisposition of the drugs. Such considerations are necessary since:

1. Species;
2. Strain;
3. Gender;
4. Route;
5. Dose;
6. Frequency and time of administration;
7. Temperature;
8. Coadministration of drugs; and
9. Surgical manipulation

are but some of the factors that have been shown to influence the kinetics and metabolism of drugs. This article, using MDMA and other phenylethylamines as examples, provides evidence for the need to measure the exoosure of the drugs and their active metabolites in blood and brain (toxicokinetics) in order that conclusions based only on dynamic, biochemical, or histological evidence are more pertinent. Further, the combined use of toxicokinetic-dynamic modeling can lead to a better appreciation of the mechanisms involved and a more useful approach to the calculation of safety margins.     

Chemolithotrophic growth and regulation of hydrogenase formation in the coryneform hydrogen bacterium strain 11/x

1. The present paper deals with the chemolithotrophic growth of a Gram-positive hydrogen bacterium strain 11/x which shows the characteristic features of some coryneform bacteria.
2. Like other hydrogen bacteria, the strain 11/x is a facultative chemolithotroph and grows on many organic substrates faster than in a mineral medium under an atmosphere of knallgas+CO₂. Fully induced, autotrophically grown cells, subcultured mixotrophically on fructose show additive growth.
3. Cell-free extracts of autotrophically grown cells are able to reduce methylene blue, dichlorophenolindophenol, phenazine methosulphate, menadione, and FMN with hydrogen. Conditions for direct NAD(P) reduction could not be found.
4. Hydrogenase is formed under autotrophic as well as mixotrophic conditions. In the latter case the rate of hydrogenase formation is diminished depending on the organic substrate. Heterotrophically grown cells do not have any detectable hydrogenase activity. For the induction of hydrogenase in those cells a nitrogen source is a prerequisite.
5. The formation of ribulose-1,5-diphosphate carboxylase and phosphoribulokinase seems to be regulated in a way similar to that of hydrogenase: the enzymes could only be detected in autotrophically and mixotrophically grown cells but not in those grown heterotrophically.

     

Survival,osmoregulatory ability,and respiration of idotea chelipes (Crustacea,Isopoda) from lake veere in different salinities and temperatures

1. An ecological and physiological study ofI. chelipes from Lake Veere, The Netherlands, was made.
2. Both osmoregulatory capacity and survival decrease with increasing temperature as well as with decreasing salinity.
3. Respiration experiments suggest that the need of energy by osmoregulatory activity may be supplied at the cost of other physiological processes, at any rate at temperatures of 10°C and higher.
4. It may be expected that, if temperatures higher than 15°C and salinities lower than 8‰ coincide, the population ofI. chelipes will be affected negatively.

     

Glycolipids and the structure of chlorosomes in green bacteria

1. The cellular content of galactolipids in Chlorobium and Chloroflexus is not related to bacteriochlorophyll content nor to the total amount of chlorosome material in the cells.
2. Chlorosomes of both bacteria were agglutinated by Ricinus lectin and the agglutination was increased after treatment of the chlorosomes with trypsin.
3. When cell free preparations of both bacteria were treated with trypsin prior to centrifugation on sucrose gradients, the resulting chlorosome fractions were less contaminated with material derived from the cytoplasmic membrane than when trypsin was not employed.

     

The occurrence of the Entner-Doudoroff pathway in bacteria

The occurrence of the two key enzymes of the Entner-Doudoroff pathway, gluconate-6-phosphate dehydrase and 2-keto-3-deoxygluconate-6-phosphate aldolase, was determined in approximately 150 strains belonging to 37 different bacterial genera. The following results were obtained:

1. 24 out of 37 genera have at least one representative with the Entner-Doudoroff mechanism. It is thus more widespread than previously thought.
2. The Entner-Doudoroff mechanism occurs mainly in gram-negative bacteria with a DNA base composition in the range 52–70% GC. Eighty-five per cent of these organisms contain the system, while only 20% (6 strains) of the gram-negative organisms with less than 52% GC possess both enzymes.
3. This pathway is absent in all gram-positive organisms investigated except in 5 out of 12Nocardia strains.
4. Erwinia and some strains of theAchromobacter-Alcaligenes group are exceptional, since they possess only 2-keto-3-deoxygluconate-6-phosphate aldolase.

     

Effect of feeding on the respiration rate of the rotifer Brachionus plicatilis

The effect of feeding on the respiration rate of Brachionus plicatilis was studied. Oxygen consumption was determined under two feeding regimes, duplicate feeding and constant feeding. Oxygen consumption rate increased during feeding. The oxygen consumption profile is discussed in relation to the following processes:

1. filtration, mastication, and locomotion during feeding
2. specific dynamic action (SDA)
3. egg formation and routine metabolism.

     

Aerobic and anaerobic growth of Paracoccus denitrificans on methanol

1. The dye-linked methanol dehydrogenase from Paracoccus denitrificans grown aerobically on methanol has been purified and its properties compared with similar enzymes from other bacteria. It was shown to be specific and to have high affinity for primary alcohols and formaldehyde as substrate, ammonia was the best activator and the enzyme could be linked to reduction of phenazine methosulphate.
2. Paracoccus denitrificans could be grown anaerobically on methanol, using nitrate or nitrite as electron acceptor. The methanol dehydrogenase synthesized under these conditions could not be differentiated from the aerobically-synthesized enzyme.
3. Activities of methanol dehydrogenase, formaldehyde dehydrogenase, formate dehydrogenase, nitrate reductase and nitrite reductase were measured under aerobic and anaerobic growth conditions.
4. Difference spectra of reduced and oxidized cytochromes in membrane and supernatant fractions of methanol-grown P. denitrificans were measured.
5. From the results of the spectral and enzymatic analyses it has been suggested that anaerobic growth on methanol/nitrate is made possible by reduction of nitrate to nitrite using electrons derived from the pyridine nucleotide-linked dehydrogenations of formaldehyde and formate, the nitrite so produced then functioning as electron acceptor for methanol dehydrogenase via cytochrome c and nitrite reductase.

     

The anaerobic metabolism of malate of Saccharomyces bailii and the partial purification and characterization of malic enzyme

1. The main pathway of the anaerobic metabolism of l-malate in Saccharomyces bailii is catalyzed by a l-malic enzyme.
2. The enzyme was purified more than 300-fold. During the purification procedure fumarase and pyruvate decarboxylase were removed completely, and malate dehydrogenase and oxalacetate decarboxylase were removed to a very large extent.
3. Manganese ions are not required for the reaction of malic enzyme of Saccharomyces bailii, but the activity of the enzyme is increased by manganese.
4. The reaction of l-malic enzyme proceeds with the coenzymes NAD and (to a lesser extent) NADP.
5. The K _m-values of the malic enzyme of Saccharomyces bailii were 10 mM for l-malate and 0.1 mM for NAD.
6. A model based on the activity and substrate affinity of malic enzyme, the intracellular concentration of malate and phosphate, and its action on fumarase, is proposed to explain the complete anaerobic degradation of malate in Saccharomyces bailii as compared with the partial decomposition of malate in Saccharomyces cerevisiae.

     

Bioavailability of organic chemicals in the aquatic environment

• 1.1. Bioavailability in the aquatic environment can be defined as the external availability of a chemical to an organism. The availability of sediment-sorbed chemicals to organisms is a particularly important aspect of this phenomena.
• 2.2. Various experiments described in the literature, such as toxicity and accumulation experiments, have investigated the influence of suspended sediment in the aqueous phase on bioavailability.
• 3.3. The bioavailability of a chemical appears to be influenced by the chemical, the sediment, and the organism being examined. Thus, describing “the bioavailability” of a chemical in the aquatic environment is not a simple process.

     

A study on the rate of water transport of the clam katelysia opima in relation to environmental conditions

1. The neutral red technique was employed to study the rate of filtration in Katelysia opima.
2. The weight specific water filtration was found to be greater for younger clams compared to the older ones.
3. The rate of water filtration increased with decreasing salinity.
4. Water filtration was found to increase as temperature increased, reaching a maximum at 35°C. but then sharply decreasing at 39°C.
5. Light had no significant effect on the rate of filtration.
6. Suspended matter was found to affect the rate of water filtration.
7. The rate of filtration was low at high pH and high in low pH.
8. The rate of water filtration was found to be faster during high tide than during low tide.
9. The presence of the parasitic crab, Pennotheris sp., in the mantle cavity of clams had a marked effect on the particle filtration.
10. Accidental cut of the siphon tips had no effect on the rate of filtration.

     

Correlation of the effects of citric acid cycle metabolites on succinate oxidation by rat liver mitochondria and submitochondrial particles

1. Succinate dehydrogenase is inhibited by citrate and β-hydroxybutyrate in a complex manner, both in mitochondria and submitochondrial particles. Kinetics of inhibition in the particles points to a competitive component in the mechanism involved.
2. Pyruvate, α-ketoglutarate, malate, and glutamate stimulate oxidation of succinate by mitochondria.
3. Stimulation by α-ketoglutarate and glutamate is not influenced by the presence of rotenone.
4. Stimulation by pyruvate is higher in the absence of rotenone and increases significantly in the presence of K⁺ and valinomycin. Pyruvate supplies in mitochondria reducing equivalents for malate dehydrogenase operating in the reverse direction-reduction of oxaloacetate to malate.
5. Stimulation by malate is higher in the presence of rotenone.

     

Inhibition of carotenoid synthesis in Myxococcus fulvus (Myxobacterales)

1. The inhibitory effects of CPTA, nicotine, DPA, and San 6706 on carotenogenesis in Myxococcus fulvus were investigated.
2. The effects of CPTA, D-nicotine, and L-nicotine were very similar. The action of the drugs wasadditive. The cyclization was inhibited at low doses, the introduction of the hydroxyl group at C-1′ at higher doses. Lycopene accumulated at high drug concentration. The mode of action of the inhibitors is discussed.
3. In a carotenoid mutant of M. fulvus a stimulation of the “7,8-dehydrogenase” by CPTA was observed.
4. The specific carotenoid content of bacteria was increased by DPA due to an enhanced formation of phytoene. At low doses of DPA small amounts of an intermediate carotenoid glucoside ester, a 7,8-dihydro derivative, were detected.
5. DPA was taken up by the plasma membrane. Quantitative removal of DPA by washing was not possible.
6. San 6706 specifically and reversibly blocked the desaturation of phytoene.