Seed protein and isozyme variations in Triticum tauschii (Aegilops squarrosa)

Sixty Triticum tauschii (Aegilops squarrosa, 2n=2x=14, DD) accessions were evaluated for the variability of high-molecular-weight (HMW) glutenins, gliadins and isozymes of seed esterase, -amylase and glucose-phosphate isomerase. Wide variability was observed for HMW-glutenins and gliadins. The implications of unique HMW-glutenin alleles for quality parameters are discussed. Isozyme evaluations indicated more variability for the Est-D ^t 5 locus as compared to the Est-D5 of bread-wheat. The polymorphism for -Amy-D ^t 1 was less than that of -Amy-D1. Similar to the bread-wheat situation, Gpi-D ^t 1 showed no polymorphism. The variability observed with the traits evaluated can be readily observed in T. turgidum x T. tauschii synthetic hexaploids (2n=6x=42, AABBDD) suggesting that T. tauschii accessions may be a rich source for enhancing the genetic variability of T. aestivum cultivars.     

应用A-PAGE技术研究玉米自交系资源种子蛋白的遗传多样性

采用酸性聚丙烯酰胺凝胶电泳(A-PAGE)技术对260份玉米自交系种质资源的种子储藏蛋白进行检测,分析了这组种质在蛋白水平上的遗传多样性。结果表明,在供试自交系中,种子盐溶和酸溶蛋白电泳谱带均显示出较高的多态性,并存在一致性。其中盐溶蛋白电泳谱带数目多于酸溶蛋白,且95%为多态性谱带,表明盐溶蛋白在供试自交系资源中具有丰富的多样性。利用盐溶蛋白多态性完成的聚类分析结果和自交系系谱及杂种优势群之间没有明显的对应关系,表明储藏蛋白A-PAGE方法对于大规模玉米种质资源的遗传多样性分析和类群划分可能存在局限性。     

内江猪染色体G带及其定量分析

采用外周血淋巴细胞培养技术和胰酶法对内江猪染色体进行了G显带,并运用扫描显微分光光度法对染色体G带进行了系统的定量分析,获得了染色体核型及G带带纹的精确数据。包括每条单倍染色体的着丝粒指数、长度、面积、积分光密度;每条G带深染带纹的宽度、面积、积分光密度、带峰值等,并绘出了带吸收光密度柱形图和消光三维图。     

An Electrophoretic Analysis of the Seed Protein Body Proteins from Pinus Nigra

Protein bodies (PBs) of European black pine (Pinus nigra Arn.) were isolated from mature seeds. Extracted soluble matrix proteins and crystalloid proteins PBs proteins were investigated by SDS-PAGE electrophoresis in presence and absence of 2-mercaptoethanol. The proteins of molecular masses 16, 17, 18, 61 and 65 kDa were presented only in crystalloid protein samples. Only 15 kDa protein was present in soluble matrix proteins and not in crystalloid proteins. Another protein bands were present in both soluble matrix and crystalloid proteins. 20, 37, 38, 39 and 48 kDa proteins were strongly visible among crystalloid proteins. Bands of 23 and 32 kDa were more visible in soluble matrix protein samples. Different composition in crystalloid proteins was found in absence of 2-mercaptoethanol: no proteins with molecular mass 71 kDa and more proteins in soluble matrix. In case of crystalloid proteins we detected 7 protein bands in interval from 71 to 212 kDa.     

Characterization of a dominant mutation for the liguleless trait: Aegilops tauschii liguleless (Lgt)

Background

Leaves of Poaceae have a unique morphological feature: they consist of a proximal sheath and a distal blade separated by a ligular region. The sheath provides structural support and protects young developing leaves, whereas the main function of the blade is photosynthesis. The auricles allow the blade to tilt back for optimal photosynthesis and determine the angle of a leaf, whereas the ligule protects the stem from the entry of water, microorganisms, and pests. Liguleless variants have an upright leaf blade that wraps around the culm. Research on liguleless mutants of maize and other cereals has led to identification of genes that are involved in leaf patterning and differentiation.

Results

We characterized an induced liguleless mutant (LM) of Aegilops tauschii Coss., a donor of genome D of bread wheat Triticum aestivum L.. The liguleless phenotype of LM is under dominant monogenic control (Lg^t). To determine precise position of Lg^t on the Ae. tauschii genetic map, highly saturated genetic maps were constructed containing 887 single-nucleotide polymorphism (SNP) markers derived via diversity arrays technology (DArT)seq. The Lg^t gene was mapped to chromosome 5DS. Taking into account coordinates of the SNP markers, flanking Lg^t, on the pseudomolecule 5D, a chromosomal region that contains this gene was determined, and a list of candidate genes was identified. Morphological features of the LM phenotype suggest that Lg^t participates in the control of leaf development, mainly, in leaf proximal–distal patterning, and its dominant mutation causes abnormal ligular region but does not affect reproductive development.

Conclusions

Here we report characterization of a liguleless Ae. tauschii mutant, whose phenotype is under control of a dominant mutation of Lg^t. The dominant mode of inheritance of the liguleless trait in a Triticeae species is reported for the first time. The position of the Lg^t locus on chromosome 5DS allowed us to identify a list of candidate genes. This list does not contain Ae. tauschii orthologs of any well-characterized cereal genes whose mutations cause liguleless phenotypes. Thus, the characterized Lg^t mutant represents a new model for further investigation of plant leaf patterning and differentiation.

     

Identification and Characterization of the Seed Storage Proteins from Alfalfa (Medicago sativa)

The major seed storage proteins in alfalfa are medicagin (alegumin-like globulin), alfin (a vicilin-like globulin) anda family of Lower Molecular Weight albumins (LMW₁₃). These comprise30%, 10% and 20%, respectively, of the total extractable proteinfrom cotyledons of mature seeds. Alfin is a heterogeneous oligomericprotein (Mr 150 kD) composed of polypeptides ranging in sizefrom Mr 50 to 14 kD (₁,-₆; 50, 38, 32, 20, 16 and 14 kD, respectively).Medicagin is also a high molecular weight oligomeric protein,but requires high concentrations of salt for solubilization.It is comprised of a family of individually distinct subunits,each composed of an acidic polypeptide (A₁–A₉; Mr 49 to39 kD) linked via disulphide bond(s) to a basic polypeptide(B₁, B₂, B₃; Mr 24, 23 and 20 kD, respectively). This pairingis highly specific and two families are recognizable on thebasis of the B polypeptide (B₃ or B₁/B₂). Subunits (M_r 50–65kD) are assembled as trimers (8S) or larger oligomers (12S–15S)in mature seeds. The lower molecular weight albumins (LMW₁–₃)are acidic (pl<6), and consist of sets of disulphide-bondedpolypeptides (Mr 15 and 11 kD). Key words: Medicago sativa, seed storage proteins, alfin, medicagin     

硬粒小麦-节节麦人工合成种HMW-GS组成及1.5+10亚基的遗传分析

对C IMM YT的99份硬粒小麦—节节麦人工合成种(简称合成种)的HMW-G S组成分析发现,G lu-B 1和G lu-D 1位点的变异类型比普通小麦丰富,分别有9种和12种亚基类型;筛选出含有比5 10亚基更优质的1.5 10和5 12亚基的合成种分别有8份和1份;含有优质亚基1.5 10的合成种与普通小麦杂交结实正常;对2个合成种与2个普通小麦品种的8个正反交组合F1种子电泳发现,优质亚基1.5 10在F1代能正常表达,双亲所有亚基在F1代都得到表达,表现共显性遗传.本研究为优质亚基1.5 10和5 12转育到普通小麦中奠定了基础.     

Genetic Heterogeneity of the Giant Tiger Shrimp (Penaeus monodon) in Thailand Revealed by RAPD and Mitochondrial DNA RFLP Analyses

Genetic diversity of the giant tiger shrimp (Penaeus monodon) collected from 5 areas, Chumphon and Trat (Gulf of Thailand), and Phangnga, Satun, and Trang (Andaman Sea), was examined by randomly amplified polymorphic DNA (RAPD) and mitochondrial DNA (16S ribosomal DNA and an intergenic COI-COII) polymorphism. A total of 53 polymorphic fragments from UBC299, UBC273, and UBC268 was consistently scored across all samples. From the respective primers 26, 32, and 30 genotypes were generated. A 260-bp RAPD fragment generated by the primer UBC268 was specifically observed in 95.8% of Trat P. monodon, suggesting that this RAPD could be used as a marker for comparing phenotypic performance of P. monodon from Trat and other geographic samples. In addition, 37 mtDNA composite haplotypes were observed from restriction analysis of the same P. monodon samples. High haplotype diversity (0.855) and nucleotide diversity (3.328%) of Thai P. monodon were observed. Population differentiation of P. monodon between the Andaman Sea and Gulf of Thailand was clearly illustrated by both techniques (P < .0001). Nevertheless, contradictory results on patterns of differentiation were observed between P. monodon within the Gulf of Thailand. Analysis of nuclear DNA polymorphism (RAPD) indicated a genetically significant difference between Chumphon and Trat (P < .0001), whereas mtDNA polymorphism did not show differentiation between these samples (P= .0497). Under the presumption of selective neutrality of these markers, biased female gene flow between Trat and Chumphon P. monodon may exist and be responsible for an anomalous differentiation pattern between these geographic samples. Received October 11, 2000; accepted March 5, 2001.     

Cloning and molecular characterization of a novel x-type glutenin gene Glu-D(t)1 from Aegilops tauschii

A novel gene encoding an x-type high molecular weight glutenin subunit (HMW-GS), designated 1Dx1.1 ^t , was isolated from Aegilops tauschii. It is the largest HMW-GS gene reported so far in this species and its product has a slower mobility than that of subunit 1Ax1 in SDS-PAGE. The open reading frame (ORF) of the gene was 2,628 bp, encoding a protein of 874 amino acid residues. Comparisons of amino acid sequences showed that subunit 1Dx1.1^t had high similarity with other 1Dx subunits but also had two unique characteristics. Firstly, a tripeptide of consensus LQE present in the N-terminal domains of other 1Dx subunits was absent from subunit Dx1.1^t. Secondly, three copies of tandem duplications of the tripeptide motif GQQ and a novel tripeptide sequence (GQL) were present in its central repetitive domain. Phylogenetic analysis showed that subunit 1Dx1.1^t clustered with other known 1Dx subunits.     

节节麦细胞不同分裂时期和阶段的G—带核型及其变动性分析

采用改良的ASG法获得了中期和3个染色体凝缩程度不同的早中期阶段（分别称为早中期Ⅰ、Ⅱ、Ⅲ）染色体的G-带,并进行了G-带核型和变动性分析。所分析的分裂时期和阶段,每条染色体的全长显示出了密切邻近的多重的带纹,带纹细窄、大小较相近,带间区小,带纹分布较密集而均匀。随着有丝分裂进程推进,染色体的带纹数目减少,早中期Ⅰ、Ⅱ、Ⅲ于中期单倍染色体组的G-带带纹总数分别减少41%、36%、28%,而染色体组的绝对长度分别缩短43%、37%、27%,带数减少幅度与染色体长度缩短的幅度几乎相等。早中期Ⅰ至早中期Ⅱ、Ⅲ和早中期Ⅱ至早中期Ⅲ的带纹减少幅度与染色体长度缩短幅度也基本一致。染色体组中各染色体之间带纹减少和染色体缩短的比例不尽相同,有一定的变幅。早中期Ⅰ、Ⅱ、Ⅲ和中期染色体组中每单位绝对长度的带数（带/μm）分别为2.19、2.22、2.32和2.29,差异不大。对节节麦G-带的特性等问题进行了讨论。     

Molecular characterization and phylogenetic analysis of a novel glutenin gene (Dy10.1t) from Aegilops tauschii.

A novel y-type high molecular mass glutenin subunit (HMM-GS) possessing a mobility that is slightly slower than that of the subunit Dy10 obtained by SDS-PAGE, named Dy10.1t, in the wild wheat Aegilops tauschii was identified by 1- and 2-dimensional gel electrophoresis, capillary electrophoresis, and matrix-assisted laser desorption ionization time of flight mass spectrometry (MALDI-TOF-MS). The gene encoding the HMM subunit Dy10.1t was amplified with allele-specific PCR primers, and the amplified products were cloned and sequenced. The coding domain of the Dy10.1t subunit gene consisted of 1980 bp encoding a protein of 658 residues with an M rs of 68 611 Da, which was similar to the M rs determined by MALDI-TOF-MS. The deduced amino acid sequence indicated that Dy10.1t subunit displayed a greater similarity to the Dy12 subunit, differing by only 8 amino acid substitutions. Six coding region single-nucleotide polymorphisms were discovered in the Dy10.1t gene by multiple alignments (1 per 330 bp), 1 in the N-terminal domain and the others in the central repeats. Five of them resulted in residue substitutions, whereas 3 created enzyme site changes. The homology and neighbour-joining trees constructed from code domain sequences of 20 x- and y-type glutenin genes from different Triticum species separated into 2 halves, which corresponded to the x-type and y-type HMM glutenin alleles. Phylogenetic analysis revealed that the Glu-1 gene duplication event probably occurred at about 16.83 million years ago, whereas the divergence times of A, B, and D genomes within x-type and y-type halves were before 7.047 and 10.54 million years ago, respectively.     

Analysis of relationships between Aegilops tauschii and the D genome of wheat utilizing microsatellites.

Sixty Aegilops tauschii accessions and 60 European hexaploid wheat varieties were analyzed with 14 wheat microsatellite (WMS) primer sets to (i) study the phylogeny of Ae. tauschii, (ii) search for a specific genotype of Ae. tauschii most closely related to the D genome of hexaploid wheat, and (iii) narrow down the presumed birthplace of the latter. An average of 6.5 and 4.0 alleles per locus was detected in Ae. tauschii and in wheat, respectively. The highest genetic diversity of Ae. tauschii was found in Transcaucasia and southeast of the Caspian Sea. Distribution of the 87 alleles (without null alleles) found in Aegilops did not allow differentiation of the species into the two subspecies strangulata and tauschii. Excluding null alleles, 41 alleles occurred parallel in wheat and in Aegilops. Data obtained in this study supports the view of the D genome of hexaploid wheat being a composite of several sources but does not support subsp. strangulata as the possible major source of the D genome. The highest number of region-specific alleles (three) in Ae. tauschii occurring also in the D genome of wheat, and therefore most indicative for its evolution was found in present-day Georgia, where subsp. strangulata is not endemic.     

Two-Dimensional Electrophoretic Mapping of Proteins of Bundle Sheath and Mesophyll Cells of the C(4) Grass Digitaria sanguinalis (L.) Scop. (Crabgrass)

Two-dimensional electrophoresis was performed on proteins of bundle sheath and mesophyll cells isolated from the C₄ grass Digitaria sanguinalis (L.) Scop. Two-dimensional maps of these proteins were constructed and ribulose-1,5-biphosphate carboxylase and phosphoenolpyruvate carboxylase were identified. Of the total number of proteins found in both cell types, 36% were found only in bundle sheath cells, 17% only in mesophyll cells, and 47% in both cell types. By comparison, the distributions of 48 enzymes assayed in these cell types were 35%, 21%, and 44%, respectively.

Protein patterns were also compared with C₄ plants exhibiting different decarboxylation pathways and, in both bundle sheath and mesophyll cells, proteins were found which were unique to each species. Bundle sheath proteins of one C₄ species were found to be more like bundle sheath proteins of another C₄ species than like mesophyll proteins of the same species.

     

Comparative Electrophoretic Studies of the Seed Proteins of Certain Species of Brassica and Sinapis

The saline-soluble seed proteins of Brassica campestris var.autumnalis, B. nigra, B. oleracea, B. campestris var. rapa andSinapis alba have been investigated using serological methodsand detection of enzymes after electrophoresis in starch gels.These methods were used to determine the generic status of Sinapisalba and the varietal or specific status of B. campestris var.rapa. The results of protein analysis agree with establishedtaxonomy and suggest that both methods help to resolve sometaxonomic problems.     

Spatial Genetic Heterogeneity in Populations of a Newly Invasive Whitefly in China Revealed by a Nation-Wide Field Survey

Background

Even though introductions of exotic species provide ready-made experiments of rapid evolution, few studies have examined the genetic structure of an exotic species shortly after its initial introduction and subsequent spread. To determine the genetic structure of its populations during the initial introduction, we investigated the invasive sweet potato whitefly (Bemisia tabaci Q, commonly known as B. tabaci biotype Q) in China, which was introduced in approximately 2003. A total of 619 B. tabaci Q individuals in 20 provinces throughout China were collected and analyzed using five microsatellite loci.

Results

The introduced populations of B. tabaci Q in China represent eight genetic clusters with different geographic distributions. The populations in Yunnan Province, where B. tabaci Q was first detected, are genetically different from the other populations in China.

Conclusion

The introduced populations of B. tabaci Q in China have high spatial genetic heterogeneity. Additional research is required to determine whether the heterogeneity results from multiple introductions, rapid evolution following one or few introductions, or some combination of multiple introductions and rapid evolution. The heterogeneity, however, is inconsistent with a single introduction at Yunnan Province, where B. tabaci Q was first detected, followed by spread.     

大绒鼠的分带核型研究

本文采用G带、C带和银染核仁组织者(Ag-NORs)等技术,对大绒鼠(Eothe nomys miletus miletus)的核型进行观察分析。结果表明:2n=56,常染色体和性染色体皆为单臂染色体。X染色体的长度接近于No.1染色体,Y染色体的长度相当于14号染色体。G分带可鉴别每对染色体的特征,C-带核型中全部着丝点C带均显示不同程度的阳性。Y染色体整条呈阳性。Ag-NORs有5对,分别分布于1、2、6、14和27号染色体的着丝粒附近。通过核型分析,对大绒鼠的分类地位进行了初步探讨。     

RAPD Analysis of Genetic Diversity in Indian Tetraploid and Diploid Cotton (Gossypium spp)

Random Amplified Polymorphic DNA (RAPD) analysis was used to evaluate genetic diversity among commercial Indian cotton varieties. Fifteen varieties belonging to Gossypium hirsutum L and seven to G. arboreum L were analyzed with 50 random decamer primers using the polymerase chain reaction (PCR). Twenty six of the primers detected polymorphism in all 22 cotton varieties. A total of 371 bands were amplified, 87% of which were polymorphic. Cluster analysis by the unweighted pair group method of arithmetic means (UPGMA) showed that diploids and tetraploids can be divided in two groups at a similarity of 30%. Diploid variety C402W showed the least similarity to all the others in the group. Among tetraploids, closely related varieties Pusa 8-6, 4515 and RS 875 were distinctly different from the rest. The analysis revealed that the intervarietal genetic relationships of several varieties is related to their pedigree. The results also revealed that tetraploids show a much narrower genetic base (similarity range of 65–95%) than the diploids (similarity range 54–88%). The results obtained can be used for the selection of parents to generate a mapping population and begin a breeding programme.     

Isolation and Characterization of Mustard (Sinapis alba L.) Seed Storage Proteins

A total storage protein fraction was prepared from mustard (Sinapis alba L.) seeds via isolated protein bodies and characterized by sedimentation, immunological, and electrophoretic techniques. Mustard seed storage protein consists of three fractions (1) a “legumin-like” 13-S complex composed of two pairs of disulfide-linked polypeptides (16.5 + 28.5 kDa and 19.5 + 34 kDa, respectively) and two single polypeptides (18 kDa and 26 kDa), (2) a “vicilin-like” 9-S complex composed of two glycoproteins (64 kDa and 77 kDa), and (3) two small polypeptides (10 kDa and 11 kDa) which probably represent the 1.7-S complex found in other Cruciferae. In contrast to related species, no glycosylated polypeptide was found in the 13-S complex. Immunological relationships were found between the paired polypeptides of the 13-S complex but not between polypeptides of the 13-S complex and polypeptides of the 9-S complex. Pulse-chase labeling and in vitro translation of polysomal RNA from young embryos demonstrated that the polypeptides of the 13-S complex originate from high molecular mass precursors, except for the 18 kDa polypeptide which appears to be synthesized in its final size. The amino-acid composition of the major polypeptides of the mustard storage protein is given.     

Phylogenetic Relationships and Intraspecific Variation of D-Genome Aegilops L. as Revealed by RAPD Analysis

RAPD analysis was carried out to study the genetic variation and phylogenetic relationships of polyploid Aegilops species, which contain the D genome as a component of the alloploid genome, and diploid Aegilops tauschii, which is a putative donor of the D genome for common wheat. In total, 74 accessions of six D-genome Aegilops species were examined. The highest intraspecific variation (0.03–0.21) was observed for Ae. tauschii. Intraspecific distances between accessions ranged 0.007–0.067 in Ae. cylindrica, 0.017–0.047 in Ae. vavilovii, and 0–0.053 inAe. juvenalis.Likewise, Ae. ventricosaand Ae. crassa showed low intraspecific polymorphism. The among-accession difference in alloploidAe. ventricosa (genome D^vN^v) was similar to that of one parental species, Ae. uniaristata (N), and substantially lower than in the other parent, Ae. tauschii (D). The among-accession difference in Ae. cylindrica(C^cD^c) was considerably lower than in either parent, Ae. tauschii (D) orAe. caudata (C). With the exception of Ae. cylindrica, all D-genome species—Ae. tauschii (D),Ae. ventricosa (D^vN^v), Ae. crassa (X^crD^cr1 and X^crD^cr1D^cr2), Ae. juvenalis (X^jD^jU^j), andAe. vavilovii (X^vaD^vaS^va)—formed a single polymorphic cluster, which was distinct from clusters of other species. The only exception, Ae. cylindrica(C^cD^c), did not group with the other D-genome species, but clustered withAe. caudata (C), a donor of the C genome. The cluster of these two species was clearly distinct from the cluster of the other D-genome species and close to a cluster of Ae. umbellulata (genome U) and Ae. ovata (genome U^gM^g). Thus, RAPD analysis for the first time was used to estimate and to compare the interpopulation polymorphism and to establish the phylogenetic relationships of all diploid and alloploid D-genome Aegilops species.