Syntheses, characterizations and crystal structures of four zinc(II) and cadmium(II) complexes constructed by ligand bearing poly-coordination atoms

Treatment of 3-(4-carboxyphenylhydrazono)pentane-2,4-dione (HL) with transition metal ions afforded four novel complexes, [Zn(L)(μ₂-OOCCH₃)(H₂O)]_n (1), [Zn(L)₂(MeOH)₄] (2), {[Cd₄(η²-L)₄(μ₂-η²-L)₄(H₂O)₄(MeOH)₂]·MeOH} (3) and [Cd(η²-L)(μ₂-η²-OOCCH₃)(H₂O)₂]_n (4). Their crystal structures have been characterized by single-crystal X-ray crystallography. In polymer 1, the acetate anions bridge the Zn(II) ions forming an infinite one-dimensional (1-D) chain with L⁻ units acting as monodentate ligands in the side chain. In mononuclear complex 2, two L⁻ ligands act as monodentate fashion to coordinate to the Zn(II) ion. In its solid-state structure, [Zn(L)₂(MeOH)₄] groups are joined together by hydrogen bonds forming a three-dimensional (3-D) supramolecular network. In tetranuclear complex 3, four Cd(II) ions are linked by four μ₂-η²-L⁻ ligands, and chelated by another four L⁻ ligands, respectively. In polymer 4, the acetate anions bridge the Cd(II) ions leading to a 1-D chain containing chelating L⁻ units in the side chain.     

Exploring the effect of chain length of bridging ligands in coordination complexes and polymers derived from mixed ligand systems of pyridylnicotinamides and dicarboxylates

The supramolecular structural diversities in mixed ligand systems derived from a series of dicarboxylate anions with varying chain lengths and N-donor exo-bidentate ligand equipped with hydrogen bonding capable amide backbone with Co(II)/Zn(II) metal centers are analyzed. In this context, two complexes namely (Co(L1)₂(malonate)(H₂O)₂} (1a), {Zn(L1)₂(malonate)(H₂O)₂} (1b) and one coordination polymer namely {[Co(μ-L1)(μ-glutarate)(H₂O)] · H₂O}_n (4) (where L1 = N-(4-pyridyl)nicotinamide) have been synthesized and crystallographically characterized. The main aim of this work is to explore the effects of chain lengths of the anionic carboxylate ligands such as malonate, succinate, maleate, and glutarate, in determining the final architecture of coordination compounds based on the mixed ligands. Analyses of the structures revealed that the length of the bridging ligands have prominent effect in the formation of hierarchical structures.     

Syntheses, structures, and properties of novel one dimensional copper cyanide coordination polymers

Three new one-dimensional copper coordination polymers have been prepared and fully characterized by single-crystal X-ray diffraction, IR spectroscopy, thermogravimetric analysis, and magnetic susceptibility measurements. The structure of [Cu(CN)₂(bpy)] (1) (bpy = 2,2-bipyridyl) (monoclinic P2₁/c, a = 8.9761(7) Å, b = 16.731(1) Å, c = 8.0224(6) Å, β = 114.437(1)°) consists of Cu(II) metal centers coordinated by three cyanide ligands and chelated by one bpy to form the monomers Cu(CN)₃(bpy) with distorted square pyramidal geometry. Each monomer shares two cyanide ligands with two adjacent monomers to form infinite -Cu(II)-CN-Cu(II)-CN-Cu zigzag chains along the c-axis. The one-dimensional structure of [Cu(CN)(bpy)] (2) (hexagonal P3₂, a = 14.4883(6) Å, b = 12.921(1) Å) is built of tetrahedral Cu(CN)₂bpy metal complexes in which Cu(I) metal centers are coordinated by one nitrogen and one carbon from two different CN ligands, and two nitrogens from one bpy. The two CN ligands act as bridging ligands between adjacent monomers to form helical chains along the 3₂ screw axis. The crystal structure of [Cu₂Cl(CN)(bpy)] (3) (orthorhombic Pbca, a = 17.853(2) Å, b = 6.9724 (9) Å, c = 18.7357 (9) Å) consists of two monomers, CuCl₂(CN) and Cu(bpy)(CN) that share a cyanide ligand to form Cu₂Cl₂(CN)(bpy) dimers. The dimers link to each other by sharing Cl ligands leading to the formation of infinite Cu-Cl-Cu chain decorated by the complex Cu(CN)(bpy). Variable-temperature magnetic measurement shows an overall ferromagnetic behavior for compound 1. The magnetic pathway of compound 1 is through the cyanide bridge connecting apical and equatorial positions of adjacent copper (II) ions.     

Coordination polymers of unsymmetrical angular ligand 3-pyridin-4-ylbenzoate acid: Syntheses, structural diversity and properties

Six new 1-3D coordination polymers of an unsymmetrical angular ligand 3-pyridin-4-ylbenzoate (L), namely, [Ni(L)₂(C₂H₆O₂)]_n (1), [Cd(L)₂(H₂O)₂]_n·4H₂O (2), [Zn₂(OH)(L)₃]_n (3), [Fe₂(OH)(L)₃]_n (4), [Ni(L)₂(H₂O)]_n (5) and [Cd(L)₂(H₂O)]_n (6) were hydro(solvo)thermally synthesized. They have abounding structure chemistry ranging from one-dimensional ribbons (1 and 2), and two-dimensional novel helical double-layered frameworks (3 and 4) to three-dimensional CdSO₄-topological porous interpenetrating architectures with hydrophilic and hydrophobic channels regularly arraying (5 and 6). The labile conformations and coordination modes of ligand L, which were finely tuned by reaction conditions, perhaps play the key role in the construction of various architectures. Very interestingly, the slight difference in solvent system or temperature resulted in the distinct architectures of nickel(II) complexes 1 and 5 or cadmium(II) complexes 2 and 6. As expected, the unsymmetrical ligand L has a trend to construct metal-organic helixes as observed in 3 and 4. Thermogravimetric analysis of 5 shows the main framework retains stability until a higher temperature 379 °C. The 3D microporous network of 5 can slightly absorb for N₂ and Ar. Compounds 2, 3 and 6 emit ligand-centered photoluminescence but with obviously different intensities owing to the structural diversities and coordinating water molecules.     

Two heterometal-organic coordination polymers with chelidamic acid: Syntheses, structures and optical properties

Two heterometal-organic coordination polymers with chelidamic acid ligands, [AgNd(C₇H₃NO₅)₂·3H₂O]_n (1) and 0.75H₃O·[K_0.25Nd(C₇H₃NO₅)₂·3H₂O]·1.75H₂O (2), have been synthesized and characterized by X-ray single-crystal diffraction. The crystal structure of 1 features that chelating units composed of one Nd(III) ion and two tridentate chelating chelidamic acid ligands are connected by the Ag(I) ions to form a one-dimensional chain, further linked by hydrogen bonds into a 3D network. As for 2, discrete independent molecules, made up of Nd(III) and K(I) ions and chelidamic acid ligands, are linked through the hydrogen bonds to form a 1D chain, which are further inter-linked through the complex hydrogen bonds to form a 3D network. The optical properties of 1 and 2 were investigated in terms of fluorescent spectra, which both exhibit good luminescence.     

Cd(II) coordination polymers constructed from flexible disulfide ligand: Solvothermal syntheses, structures and luminescent properties

Four novel coordination polymers, [Cd(Hdtbb)(dtbb)_0.5(DMF)]_n (1), {[Cd(dtbb)(2,2′-bpy)(H₂O)]·2DMA}_n (2), {[Cd₂(dtbb)₂(1,4-bix)₂]·3DMF}_n (3) and [Cd(dtbb)(1,4-btx)]_n (4) [H₂dtbb = 2,2-dithiobisbenzoic acid, 2,2′-bpy = 2,2′-bipyridine, 1,4-bix = 1,4-bis(imidazol-1-ylmethyl)benzene, 1,4-btx = 1,4-bis(triazol-1-ylmethyl)benzene] have been synthesized and structurally characterized. Complexes 1 and 2 possess one-dimensional (1D) infinite structures. The structures of complexes 3 and 4 exhibit two dimensional (2D) frameworks, which mainly due to the differences in the bridging modes of dtbb²⁻ ligand and the effect of the N-donor auxiliary ligands. The infrared spectra, thermogravimetric and luminescent properties were also investigated for these compounds.     

Hydrothermal synthesis, crystal structures and photoluminescent properties of four cadmium(II) coordination polymers derived from diphenic acid and auxiliary ligands

Four novel metal coordination polymers, [Cd(dpa)(H₂O)]_n (1), [Cd(dpa)(2,2′-bipy)]_n (2), {[Cd₂(dpa)₂(4,4′-bipy)₃](4,4′-bipy)(H₂O)₂}_n (3) and [Cd(dpa)(bim)₂(H₂O)]}_n (4) (H₂dpa = 2,4′-biphenyl-dicarboxylic acid, 2,2′-bipy = 2,2′-bipyridine, 4,4′-bipy = 4,4′-bipyridine, bim = benzimidazole), have been synthesized and structurally characterized by elemental analysis, IR and X-ray diffraction. Single-crystal X-ray analyses reveal that the 2,4′-diphenic acids acts as bridging ligands, exhibiting rich coordination modes to link metal ions: bis-monodentate, bidentate chelating, chelating/bridging, monoatomic bridging and monodentate modes. In addition, the luminescent properties for compound 1-4 are also investigated in this work.     

Novel cup-like helical coordination polymers: synthesis, crystal structures and thermal properties

By the design of ligand 1,1^′-(1,5-pentamethylene)bis-1H-benzimidazole (pbbm), we have synthesized polymers {[Co(NO₃)(pbbm)₂]NO₃ · 1/2H₂O}_n (1), {[CdCl(pbbm)₂]Cl · CH₃OH}_n (2) and {[Cu(Ac)₂(pbbm)] · CH₃OH}_n (3), and characterized their structures by single crystal X-ray diffraction as well as thermoanalysis. In polymers 1 and 2, one of the anions coordinates to the central ion, the other is located in the environment. Two pbbm ligands coordinate simultaneously to two metal centers generating one-dimensional cup-like helical chains. To our best knowledge, this cup-like structure has never been observed in the reported polymers. In polymer 3, each Cu atom is five-coordinate by two nitrogen atoms from two pbbm ligands, and three oxygen atoms from one monodentate acetate anion and one chelating acetate anion leading to one-dimensional wave-like linear chain. In addition, the DTA and TG results of the three polymers are in agreement with the crystal structures.     

New supramolecular complexes generated from Mn, Fe, Co, Zn, Fe with a bent dipyridyl ligand: Metal- and anion-directed assembly

Assemblies of an angular dipyridyl ligand 2,5-bis(4-pyridyl)-1,3,4-oxadiazole (4-bpo) with a series of metal perchlorate afford five new supramolecular complexes with the general formula of [M(4-bpo)₂(H₂O)₄] · (4-bpo)₂ · (anion) · (solvent), in which M = Mn^II for 1, Fe^II for 2, Co^II for 3, Zn^II for 4, and Fe^III for 5. Although similar molecular structures and compositions are found for these mononuclear complexes, they display two types of supramolecular lattices. Complexes 1, 4 and 5 similarly crystallize in space group P2/n or P2/c. The complex cations, free 4-bpo and lattice water are linked to generate 2D layered frameworks with the aid of hydrogen bonding, and the counter anions are located within and between (also methanol in 5) these 2D arrays. However, complexes 2 and 3 are isostructural in space group . Two types of alternate 2D layers consisting of complex cations and free 4-bpo components, respectively, are observed with the anions and lattice water locating between them. These motifs are interlinked by complicated hydrogen-bonding to form a 3D intercalated network. Moreover, when Co(NO₃)₂ is used instead of Co(ClO₄)₂ in the assembly of 3, a 1D polymeric chain complex {[Co(4-bpo)(H₂O)₂(NO₃)₂](H₂O)₃}_n (6) is generated. These results indicate that the choice of metal ion and anion exerts a significant influence on governing the target complexes. A comparison of the structural features for all metal perchlorate complexes with 4-bpo is also briefly discussed.     

Synthesis and structures of three d metal coordination polymers constructed from flexible polycarboxylate and 1,10-phenanthroline ligands

Three novel d¹⁰ metal coordination polymers, {[Cd(H₂odpa)(phen)₂]·H₂O}_n (1), [Cd₂(odpa)(phen)(H₂O)₂]_n (2), {[Zn₄(odpa)₂(phen)₂(H₂O)₂]·H₂O}_n (3), (H₄odpa = 4,4′-oxydiphthalic acid, phen = 1,10-phenanthroline) were obtained with different metal/ligand ratios through hydrothermal method and characterized. Compound 1 forms a one dimensional zigzag chain, in which two phen ligands chelate to one cadmium atom. Compound 2 shows a three dimensional network structure comprised of new tetranuclear cadmium clusters as the nodes and (odpa)⁴⁻ anions as the linkers, exhibits an unusual topological structure. Compound 3 is an unprecedented three dimensional polymer based on octanuclear zinc clusters cross-linked by (odpa)⁴⁻ anions. In 1-3, central Cd^II/Zn^II ions and (odpa)⁴⁻ ligand display completely different coordination modes and conformations. In addition, the thermal stabilities and photoluminescence properties of 1-3 were also studied.     

Metal-dependent dimensionality in coordination polymers of a semi-rigid dicarboxylate ligand with additional amide groups: Syntheses, structures and luminescent properties

Three new coordination polymers, [CdL(H₂O)₃·H₂O]_n (1), [MnL(H₂O)₂]_n (2) and [ZnL]_n (3) (L = 2,2′-[1,4-bis(-benzamido)]diacetate) have been hydrothermally synthesized. Complex 1 and complex 2 are 1-D infinite zigzag chain and 2-D rectangular grid networks, respectively, in which are further stabilized by hydrogen bonds, thus affording two 3-D supramolecular frameworks. Complex 3 exhibits a (4, 4)-connected PtS topology. Moreover, an unusual phenomenon has been observed that the dimension of these coordination polymers gradually increases with the decrease of coordination numbers of metal ions. In addition, complex 1 exhibits a strong blue luminescence in the solid state at room temperature and may be potential candidate for luminescent materials.     

Synthesis and characterization of new coordination polymers generated from oxadiazole-containing ligands and IIB metal ions

The coordination chemistry of the oxadiazole-containing rigid bidentate ligands 2,5-bis(4-pyridyl)-1,3,4-oxadiazole (L1) and 2,5-bis(3-pyridyl)-1,3,4-oxadiazole (L2) with inorganic IIB metal salts have been investigated. Five new coordination polymers (1-5) were prepared by solution reactions and fully characterized by infrared spectroscopy, elemental analysis, and single-crystal X-ray diffraction. Cd(L1)₂(CH₃CN)₂](ClO₄)₂ · (CH₃CN)₂ (1) crystallized in the monoclinic space group P2₁/c, a = 8.4028(5) Å, b = 21.3726(13) Å, c = 10.5617(7) Å, β = 95.1200(10)°, and Z = 2. In the solid state, it adopts an infinite two-dimensional polymeric structural motif with effective cross section of ca. 14.31 × 14.31 Å. Cd(L2)(H₂O)(NO₃)₂ (2) crystallized in the monoclinic space group Ia, a = 7.1203(5) Å, b = 22.2475(15) Å, c = 20.2652(16) Å, β = 90.6080(10)°, and Z = 8. In the solid state, the two Cd(II) centers are connected to each other by L2 ligands and bridging nitrates into a two-dimensional network. [ZnCl₂(L1)] (3) and [HgI₂(L1)] · CH₃CN (4) crystallized in the monoclinic crystal system (3: P2₁/c, a = 5.3702(3) Å, b = 20.4800(11) Å, c = 12.4093(7) Å, β = 94.7930(10)°, and Z = 4; 4: P2/n, a = 17.2733(11) Å, b = 5.2173(3) Å, c = 20.4069(13) Å, β = 102.8690(10)°, and Z = 4). In the solid state, Zn(II) and Hg(II) metal centers are connected to each other by L1 ligands into a zigzag chain motif. Compound 5 (HgBr₂(L2) is different from 3 and 4, monoclinic, P2(1)/n, a = 5.470(4) Å, b = 16.271(13) Å, c = 16.486(12) Å, β = 93.197(15)°, and Z = 4) adopts a novel one-dimensional helical chain motif which resulted from the relative different coordinated orientation of the two N-donors on L2 ligand.     

Synthesis, crystal and band structures, and optical and magnetic properties of a 1D copper coordination polymer with chelidamic acid ligand

A 1D coordination polymer, {[Cu₃(C₇H₂NO₅)₂(H₂O)₇]·2(H₂O)}_n (1), has been synthesized and characterized by X-ray single-crystal diffraction. The crystal structure of 1 features that distorted square-pyramidal coordination polyhedra composed of Cu atoms and chelidamic acid ligands are interlinked into a 1D polymer, further linked by hydrogen bonds into a 3D network. The optical properties were investigated in terms of diffuse reflectance and fluorescent spectra, which exhibit strong luminescence. The electronic band structure along with the density of states (DOSs) calculated by the DFT method indicate that compound 1 pose an energy band gap of 1.89 eV and that the origin of the emission band may be mainly ascribed to metal-to-ligand charge transfer (MLCT) where the electrons are transferred from the Cu-3d to O-2p and C-2p states.     

Distinctive binding and structural properties of piscine transthyretin

The thyroid hormone binding protein transthyretin (TTR) forms a macromolecular complex with the retinol-specific carrier retinol binding protein (RBP) in the blood of higher vertebrates. Piscine TTR is shown here to exhibit high binding affinity for L-thyroxine and negligible affinity for RBP. The 1.56 A resolution X-ray structure of sea bream TTR, compared with that of human TTR, reveals a high degree of conservation of the thyroid hormone binding sites. In contrast, some amino acid differences in discrete regions of sea bream TTR appear to be responsible for the lack of protein-protein recognition, providing evidence for the crucial role played by a limited number of residues in the interaction between RBP and TTR. Overall, this study makes it possible to draw conclusions on evolutionary relationships for RBPs and TTRs of phylogenetically distant vertebrates.     

Synthesis, crystal structure and luminescent properties of two cadmium thiocyanate coordination polymers with benzylpyridyl cations

Two luminescent Cd(II) complexes [RBzPy][Cd(SCN)₃] for R = Cl (1) and Br (2) have been synthesized and structurally characterized. The Cd atoms are all N3S3 hexa-coordinated with six bridging SCN⁻ and form infinite [Cd(SCN)₃]_∞ polymeric chains. The layer arrangement of the anionic chains was obtained using the larger halogenated benzylpyridyl cations. The luminescent properties of 1 and 2 in the solid state were investigated.     

Synthesis, structures, and magnetic properties of one-dimensional Fe-M (M = Ni, Cu) coordination polymers bridged by nitroprusside

Self-assembling [Fe(CN)₅(NO)]²⁻ and [M(L)]²⁺ (M = Ni, Cu; L = macrocycles) led to one-dimensional coordination polymers, [Ni(L1)][Fe(CN)₅(NO)] · 2H₂O (1) with parallel chains and [Cu(L2)][Fe(CN)₅(NO)] · 3H₂O (2) exhibiting a slanted chain structure. Compound 1 contains a planar macrocycle L1 coordinated to a slightly distorted octahedral Ni(II) ion in which the planarity of L1 gives rise to piling up chains in parallel. In contrast, a more flexible macrocyclic ligand L2 in 2 that surrounds a Cu center with a tetragonal elongation has bulky cyclohexyl groups together with pendant methyl side groups. The presence of the methyl groups on L2 in a chain makes the cyclohexyl groups in an adjacent chain tilted against the CuN₄ basal plane with the methyl groups, eventually resulting in the slanted chain structure. Magnetic data demonstrate that antiferromagnetic interactions (J ≈ −0.13 cm⁻¹) are operating although the paramagnetic centers are linked by the long diamagnetic [Fe(CN)₅(NO)]²⁻ anion.     

Coordination network solids based on Cu(II) coordination compounds with 1,4-bis-(1,2,4-triazol-1-yl)-butane as a flexible alkyl spacer ligand: Synthesis, characterization and X-ray structures

The coordination chemistry of three selected copper(II) salts with the flexible ligand 1,4-bis(1,2,4-triazol-1-yl)butane (abbreviated as btb) is described. This ligand acts as a bidentate ligand, bridging copper(II) ions, thereby generating polymers in 2D and 3D network solids.     

Synthesis, characterization, and anion selectivity of copper(II) complexes with a tetradentate Schiff base ligand

A new mononuclear Cu(II) complex, [CuL(ClO₄)₂] (1) has been derived from symmetrical tetradentate di-Schiff base, N,N′-bis-(1-pyridin-2-yl-ethylidene)-propane-1,3-diamine (L) and characterized by X-ray crystallography.The copper atom assumes a tetragonally distorted octahedral geometry with two perchlorate oxygens coordinated very weakly in the axial positions.Reactions of 1 with sodium azide, ammonium thiocyanate or sodium nitrite solution yielded compounds [CuL(N₃)]ClO₄ (2), [CuL(SCN)]ClO₄ (3) or [CuL(NO₂)]ClO₄ (4), respectively, all of which have been characterized by X-ray analysis.The geometries of the penta-coordinated copper(II) in complexes 2-4 are intermediate between square pyramid and trigonal bipyramid (tbp) having the Addition parameters (τ) 0.47, 0.45 and 0.58, respectively.In complex 4, the nitrite ion is coordinated as a chelating ligand and essentially both the O atoms of the nitrite occupy one axial site.Complex 1 shows distinct preference for the anion in the order in forming the complexes 2-4 when treated with a mixture. Electrochemical electron transfer study reveals Cu^IICu^I reduction in acetonitrile solution.     

Influence of the counter anion and solvent in the structure of copper derivatives with the 2,3-bis(2-pyridyl)pyrazine ligand

Several compounds have been isolated from the reaction between different copper bis(acetylacetonato) derivatives and the potentially bridging ligand 2,3-bis(2-pyridyl)pyrazine (bppz). A compound of formula [Cu(tfacac)₂(bppz)] (1) is obtained when the substituted trifluoromethylacetylacetonato is used. The use of different anions and the unsubstituted acetylacetonato give rise to new derivatives of general formula [{Cu(acac)}₂(μ-bppz)₂]X₂ (X⁻ = BF₄⁻, 2; PF₆⁻, 3; BPh₄⁻, 4). In these compounds the bppz ligand is acting as a bridge by chelating one copper atom and bonding monodentate a second copper atom. The presence of anions with different coordination abilities introduces variations in the copper environment and geometry. When the non-coordinating tetraphenylborate is used different compounds depending on the nature of the solvent are obtained. The dimer 4 was isolated from a methanol/chloroform mixture, while in the absence of chloroform the monomeric compound of formula [Cu(acac)(bppz)(ROH)](BPh₄)·ROH (ROH = MeOH, 5) was obtained. When ethanol was used instead of methanol the analogous derivative 6 (R = EtOH) was isolated. Both species show a mononuclear structure with the copper atom five-coordinated by the chelating acac and bppz ligands and one hydroxo group occupying the apical position. A similar environment for the copper appears in [Cu(tfacac)(bppz)(MeOH)](BPh₄), 7, which shows a dimeric structure through hydrogen bonds interactions. The magnetic susceptibility data of the dimeric compounds show very weak antiferromagnetic interactions between the copper atoms, an expected fact since the bridging bppz ligand is not planar but the monodentate pyridine is more or less perpendicular to the other two aromatic rings, precluding the spin exchange via the π ligand electrons.