Beneficial microbes going underground of root immunity

Plant roots interact with an enormous diversity of commensal, mutualistic, and pathogenic microbes, which poses a big challenge to roots to distinguish beneficial microbes from harmful ones. Plants can effectively ward off pathogens following immune recognition of conserved microbe‐associated molecular patterns (MAMPs). However, such immune elicitors are essentially not different from those of neutral and beneficial microbes that are abundantly present in the root microbiome. Recent studies indicate that the plant immune system plays an active role in influencing rhizosphere microbiome composition. Moreover, it has become increasingly clear that root‐invading beneficial microbes, including rhizobia and arbuscular mycorrhiza, evade or suppress host immunity to establish a mutualistic relationship with their host. Evidence is accumulating that many free‐living rhizosphere microbiota members can suppress root immune responses, highlighting root immune suppression as an important function of the root microbiome. Thus, the gate keeping functions of the plant immune system are not restricted to warding off root‐invading pathogens but also extend to rhizosphere microbiota, likely to promote colonization by beneficial microbes and prevent growth‐defense tradeoffs triggered by the MAMP‐rich rhizosphere environment.     

Functional traits and root morphology of alpine plants

Background and Aims

Vegetation has long been recognized to protect the soil from erosion. Understanding species differences in root morphology and functional traits is an important step to assess which species and species mixtures may provide erosion control. Furthermore, extending classification of plant functional types towards root traits may be a useful procedure in understanding important root functions.

Methods

In this study, pioneer data on traits of alpine plant species, i.e. plant height and shoot biomass, root depth, horizontal root spreading, root length, diameter, tensile strength, plant age and root biomass, from a disturbed site in the Swiss Alps are presented. The applicability of three classifications of plant functional types (PFTs), i.e. life form, growth form and root type, was examined for above- and below-ground plant traits.

Key Results

Plant traits differed considerably among species even of the same life form, e.g. in the case of total root length by more than two orders of magnitude. Within the same root diameter, species differed significantly in tensile strength: some species (Geum reptans and Luzula spicata) had roots more than twice as strong as those of other species. Species of different life forms provided different root functions (e.g. root depth and horizontal root spreading) that may be important for soil physical processes. All classifications of PFTs were helpful to categorize plant traits; however, the PFTs according to root type explained total root length far better than the other PFTs.

Conclusions

The results of the study illustrate the remarkable differences between root traits of alpine plants, some of which cannot be assessed from simple morphological inspection, e.g. tensile strength. PFT classification based on root traits seems useful to categorize plant traits, even though some patterns are better explained at the individual species level.     

Influence of root diameter on the penetration of seminal roots into a compacted subsoil

A field experiment was conducted to evaluate the influence of root diameter on the ability of roots of eight plant species to penetrate a compacted subsoil below a tilled layer. The soil was a fine sandy loam red-brown earth with a soil strength of about 3.0 MPa (at water content of 0.13 kg kg^-1, corresponding to 0.81 plastic limit) at the base of a tilled layer. Relative root diameter (RRD), which was calculated as the ratio of the mean diameters of roots of plants grown in compacted soil to the mean diameters of those from uncompacted soil, was used to compare the sensitivity of roots to thicken under mechanical stress.Diameters of root tips of plants grown in soil with a compacted layer were consistently larger than those from uncompacted soil. Tap-rooted species generally had bigger diameters and RRDs than fibrous-rooted species. A higher proportion of thicker roots penetrated the strong layer at the interface than thinner roots. There were differences between plant species in the extent to which root diameter increased in response to the compaction. The roots which had larger RRD also tended to have higher penetration percentage.The results suggest that the size of a root has a significant influence on its ability to penetrate strong soil layers. It is suggested that this could be related to the effects which root diameter may have on root growth pressure and on the mode of soil deformation during penetration.     

疏叶骆驼刺根系对土壤异质性和种间竞争的响应

近年来, 植物根系对土壤异质性的响应和植物根系之间的相互作用一直是研究的热点。过去的研究主要是针对一年生短命植物进行的, 而且多是在人工控制的温室条件下进行的。而对于多年生植物根系对养分异质性和竞争的综合作用研究很少。该文对塔里木盆地南缘多年生植物疏叶骆驼刺(Alhagi sparsifolia)根系生长对养分异质性和竞争条件的响应途径与适应策略进行了研究, 结果表明: (1)在无竞争的条件下, 疏叶骆驼刺根系优先向空间大的地方生长, 即使另一侧有养分斑块存在, 其根系也向着空间大的一侧生长; (2)在有竞争的条件下, 疏叶骆驼刺根系生长依然是优先占领空间大的一侧, 但是竞争者的存在抑制了疏叶骆驼刺的生长, 导致其枝叶生物量和根系生物量都明显减少(p < 0.01), 而养分斑块的存在促进了疏叶骆驼刺根系的生长; (3)疏叶骆驼刺根系的生长不仅需要养分, 也需要足够的空间, 空间比养分更重要; (4)有竞争者存在的时候, 两株植物的根系都先长向靠近竞争者一侧的空间, 即先占据“共有空间”。研究结果对理解植物根系觅食行为和植物对环境的适应策略有重要意义。     

The effects of environmental heterogeneity on root growth and root/shoot partitioning

AIMS: The purpose of this Botanical Briefing is to stimulate reappraisal of root growth, root/shoot partitioning, and analysis of other aspects of plant growth under heterogeneous conditions. SCOPE: Until recently, most knowledge of plant growth was based upon experimental studies carried out under homogeneous conditions. Natural environments are heterogeneous at scales relevant to plants and in forms to which they can respond. Responses to environmental heterogeneity are often localized rather than plant-wide, and not always predictable from traditional optimization arguments or from knowledge of the ontogenetic trends of plants growing under homogeneous conditions. These responses can have substantial impacts, both locally and plant-wide, on patterns of resource allocation, and significant effects on whole-plant growth. Results from recent studies are presented to illustrate responses of plants, plant populations and plant communities to nutritionally heterogeneous conditions. CONCLUSIONS: Environmental heterogeneity is a constant presence in the natural world that significantly influences plant behaviour at a variety of levels of complexity. Failure to understand its effects on plants prevents us from fully exploiting aspects of plant behaviour that are only revealed under patchy conditions. More effort should be invested into analysis of the behaviour of plants under heterogeneous conditions.     

毛乌素沙地生物土壤结皮对油蒿水分吸收的影响模拟

植物可利用水分是决定沙生灌木生长的主要因子,生物土壤结皮(简称生物结皮)在降雨期影响降水入渗,而在干旱期改变土壤蒸发,从而影响土壤水分分布,最终可能影响灌木水分吸收。然而,关于不同降水条件下生物结皮对灌木水分吸收和水分胁迫的影响机制认识不清。以油蒿为研究对象,基于试验数据和1990—2019年气象数据,采用数学模拟,定量研究了毛乌素沙地不同降水条件下生物结皮对土壤水分分布和油蒿水分吸收的影响,评价干旱期生物结皮对油蒿水分胁迫的影响。结果表明：与无结皮处理相比,生物结皮处理的土壤蒸发降低了5.1%;生物结皮改善了干旱期的土壤水分条件;生物结皮降低了植物水分胁迫的比例,平均降低比例为8.1%;生物结皮提高了植物水分吸收,平均增加比例为12.8%;生物结皮和对照植物水分吸收的比值随季节降水量的增加而降低,均值为1.13。综上,生物结皮的出现并未消极地影响沙生灌木的水分吸收。研究结果有助于理解生物结皮与灌木的共生或竞争关系。     

Bacterial-type ferroxidase tunes iron-dependent phosphate sensing during Arabidopsis root development

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Association of soybean root mycoflora with root modulation, root necrosis and plant fresh weight

Fungi were isolated from soybean plants in ten fields in south-west France. Correspondence analysis (COA) was used to find associations among taxa (species, genera, groups) and sampling units (i.e. one field at one sampling date). The first axis of the COA demonstrated a dominant sampling date effect; the second indicated an association among certain sampling units and specific taxa. Regression analysis of COA coordinate values indicated that fields with high relative isolation frequencies of Fusarium spp., F. oxysporum and ‘other species’ (mostly Chaetomium spp. and sterile fungi) were characterised by greater plant fresh weight and nodule number and lower ratings for root necrosis. Cylindrocarpon spp., Cephalosporium spp. and F. solanihad high relative isolation frequencies in fields with lower plant weight, lower nodule number and higher root necrosis ratings. The relative importance of fungal taxa was also related to soil type.     

Global patterns in fine root decomposition: climate,chemistry, mycorrhizal association and woodiness

Fine root decomposition constitutes a critical yet poorly understood flux of carbon and nutrients in terrestrial ecosystems. Here, we present the first large‐scale synthesis of species trait effects on the early stages of fine root decomposition at both global and local scales. Based on decomposition rates for 279 plant species across 105 studies and 176 sites, we found that mycorrhizal association and woodiness are the best categorical traits for predicting rates of fine root decomposition. Consistent positive effects of nitrogen and phosphorus concentrations and negative effects of lignin concentration emerged on decomposition rates within sites. Similar relationships were present across sites, along with positive effects of temperature and moisture. Calcium was not consistently related to decomposition rate at either scale. While the chemical drivers of fine root decomposition parallel those of leaf decomposition, our results indicate that the best plant functional groups for predicting fine root decomposition differ from those predicting leaf decomposition.     

Interspecific diversity in root antioxidative enzyme activities reflect root turnover strategies and preferred habitats in wetland graminoids

Antioxidant enzymes protect cells against oxidative stress and are associated with stress tolerance and longevity. In animals, variation in their activities has been shown to relate to species ecology, but in plants, comparative studies with wild species are rare. We investigated activities of five antioxidant enzymes – ascorbate peroxidase (APX), catalase (CAT), glutathione reductase (GR), peroxidase (POX), and superoxide dismutase (SOD) – in roots of four perennial graminoid wetland species over a growing season to find out whether differences in root turnover or habitat preferences would be associated with variation in seasonal patterns of antioxidant enzyme activities. The investigated species differ in their root turnover strategies (fine roots senesce in the fall or fine roots survive the winter) and habitat preferences (nutrient‐poor vs. productive wetlands). Roots were collected both in the field and from garden‐grown plants. Antioxidant enzyme activities were higher and lipid peroxidation rates lower in species with annual root systems, and for species of the nutrient‐poor wetland, compared with perennial roots and species of productive wetlands, respectively. There was variation in the activities of individual antioxidant enzymes, but discriminant analyses with all enzymes revealed a clear picture, indicating consistent associations of antioxidant enzyme activities with the type of root turnover strategy and with the preferred habitat. We conclude that antioxidant enzyme activities in plant roots are associated with the species' ecological strategies and can be used as traits for the characterization of the species' position along plant economics spectrum.     

Release from belowground enemies and shifts in root traits as interrelated drivers of alien plant invasion success: a hypothesis

Our understanding of the interrelated mechanisms driving plant invasions, such as the interplay between enemy release and resource‐acquisition traits, is biased by an aboveground perspective. To address this bias, I hypothesize that plant release from belowground enemies (especially fungal pathogens) will give invasive plant species a fitness advantage in the alien range, via shifts in root traits (e.g., increased specific root length and branching intensity) that increase resource uptake and competitive ability compared to native species in the alien range, and compared to plants of the invader in its native range. Such root‐trait changes could be ecological or evolutionary in nature. I explain how shifts in root traits could occur as a consequence of enemy release and contribute to invasion success of alien plants, and how they could be interrelated with other potential belowground drivers of invasion success (allelopathy, mutualist enhancement). Finally, I outline the approaches that could be taken to test whether belowground enemy release results in increased competitive ability and nutrient uptake by invasive alien plants, via changes in root traits in the alien range.     

Soil depth- and root diameter-related variations affect root decomposition in temperate pine and oak forests

Aims Assessment of factors regulating root decomposition is needed to understand carbon and nutrient cycling in forest ecosystems. The objective of this study is to examine the effects of soil depth and root diameter on root decomposition and to analyze the relationship of root decomposition with factors such as soil environmental conditions and initial litter quality.     

An extended root phenotype: the rhizosphere,its formation and impacts on plant fitness

Plants forage soil for water and nutrients, whose distribution is patchy and often dynamic. To improve their foraging activities, plants have evolved mechanisms to modify the physicochemical properties and microbial communities of the rhizosphere, i.e. the soil compartment under the influence of the roots. This dynamic interplay in root?soil?microbiome interactions creates emerging properties that impact plant nutrition and health. As a consequence, the rhizosphere can be considered an extended root phenotype, a manifestation of the effects of plant genes on their environment inside and/or outside of the organism. Here, we review current understanding of how plants shape the rhizosphere and the benefits it confers to plant fitness. We discuss future research challenges and how applying their solutions in crops will enable us to harvest the benefits of the extended root phenotype.     

黄土丘陵沟壑区植被恢复演替过程中根系行为特征

根系的结构与生态功能特征称为根系行为特征,研究根系行为特征对黄土区植被恢复具有重要意义。采用非线性计算方法,采集黄土区4种典型退耕植被群落根系、土壤样品,分析根系形态特征、基于径级的根长分形维数、根系生态位指数与土壤有机碳的关系。结果显示:根长密度、根生物量、根系直径随着退耕演替的发展存在缓慢增大趋势。退耕演替发展的2—21年中,根系平均分维数由2.77显著减小至2.59(P0.05),生态位指数由3.75显著增大至9.37(P0.05)。根系的生态功能性对丰富土壤有机碳具有极显著的影响效果,根系分维数与生态位指数呈极显著负相关(P0.01),即根系的结构特征直接决定了根系综合生态功能,表现为结构越复杂,功能性越强。     

Plant immune system activation is necessary for efficient root colonization by auxin-secreting beneficial bacteria

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Plant–soil feedback during biological invasions: effect of litter decomposition from an invasive plant (Sphagneticola trilobata) on its native congener (S. calendulacea)

生物入侵过程中的植物-土壤反馈：一种入侵植物的凋落物分解对其本地近缘植物的影响 植物入侵可通过正或负的植物-土壤反馈效应改变土壤的生物和非生物性质,从而影响入侵栖息地的土壤理化性质。许多入侵物种的凋落物分解可增加土壤养分,降低本地植物多样性,并导致进一步的植物入侵。关于入侵植物凋落物在不同土壤类型及深度分解及反馈效应的研究依然很少。本研究旨在明确入侵植物南美蟛蜞菊(Sphagneticola trilobata)凋落物在不同土壤类型和不同土壤深度条件下的分解情 况及其对本地近缘植物蟛蜞菊(S. calendulacea)生理生长的影响。将装有南美蟛蜞菊凋落物的尼龙袋加入到不同深度(即0、2、4 和6 cm)的砂土、营养土和粘土中,经6个月的分解后,回收凋落物袋并计算分解速率,随后在凋落物分解处理后的土壤中种植本地蟛蜞菊,并在生长期结束时测量其生理生态指标。研究结果表明,所有处理土壤类型中,凋落物在土壤深度为2和4 cm处分解后显著增加了土壤养分,而对本 地蟛蜞菊的叶片叶绿素、叶氮含量等生长指标表现为负效应。因此,入侵植物南美蟛蜞菊凋落物分解对土壤养分表现为正的反馈效应,而对本地植物蟛蜞菊的生长表现为负效应。我们的研究结果还表明,入侵植物的凋落物分解对土壤和本地物种的影响还因凋落物分解所在的土壤深度而显著不同。未来的研究应侧重于入侵栖息地中更多本地和入侵物种的植物-土壤反馈效应,以及更多土壤类型和土壤深度的入侵植物凋落物效应。