Wood and bark anatomy of Hypocalyptus support its isolated taxonomic position in Leguminosae

The wood and bark anatomy of all three species of Hypocalyptus from the monotypic South African endemic tribe Hypocalypteae were studied. Despite large morphological differences (especially in habit) the species were found to be similar in wood and bark structure. Discontinuities are quantitative only, relating mainly to differences in growth form between H. oxalidifolius, a short-lived shrublet, and the two other species, H. coluteoides and H. sophoroides, both of which are erect shrubs or small trees of up to 6 m tall. Hypocalyptus wood has a mesomorphic structure with vessels solitary or in small groups, reflecting relatively moist habitats in fynbos vegetation. In contrast to many genera of Leguminosae for which data are available, crystals are absent from the wood. This is the first report of tanniniferous tubes in the wood of Leguminosae (previously reported only in Myristicaceae and a genus from Ulmaceae). The presence of tanniniferous tubes and the absence of crystals in all three species of Hypocalyptus underline the isolated position of the genus and support its tribal status.     

Fuel Characteristics of Solid Biofuel Derived from Oil Palm Biomass and Fast Growing Timber Species in Malaysia

The fuel characteristics of solid biofuels derived from biomass that is abundantly available in Malaysia are presented. The objectives of the study were to characterize fuel properties of oil palm biomass (empty fruit bunch (EFB) and oil palm trunk (OPT)) and wood from a range of fast growing timber species (Albizia falcataria, Acacia spp., Endospermum spp. and Macaranga spp.), inclusive and exclusive of bark. Among the fast-growing timber species, the higher heating values ranged from 4288 cal g^-1 to 4383 cal g^-1 for wood inclusive of bark, and 4134 cal g^-1 to 4343 cal g^-1 for wood exclusive of bark. The inclusive of bark portion in the biomass sample generally increased the heating value except for Macaranga spp. Empty fruit bunch and oil palm trunk had heating values of 4315 cal g^-1 and 4104 cal g^-1, respectively. Ash-forming elements and trace elements were much higher in the timber species samples inclusive of bark than samples exclusive of bark. On the other hand, oil palm biomass contained higher ash-forming elements and trace elements than the wood from the fast growing timber species. The European energy crops show higher HHV, Cl and Si content but lower K, Mg, Na and P compared to the local biomass used in this study. The data obtained from this study can serve as a foundation for the selection of suitable biomass to be used as solid fuel, or as a reference on the fabrication of conversion systems for the selection of biomass solid fuel.     

Aspidosperma (Apocynaceae) plant cytotoxicity and activity towards malaria parasites. Part I: Aspidosperma nitidum (Benth) used as a remedy to treat fever and malaria in the Amazon

Infusions of Aspidosperma nitidum (Apocynaceae) wood bark are used to treat fever and malaria in the Amazon Region. Several species of this family are known to possess indole alkaloids and other classes of secondary metabolites, whereas terpenoids, an inositol and the indole alkaloids harmane-3 acid and braznitidumine have been described in A. nitidum . In the present study, extracts from the wood bark, leaves and branches of this species were prepared for assays against malaria parasites and cytotoxicity testing using human hepatoma and normal monkey kidney cells. The wood bark extracts were active against Plasmodium falciparum and showed a low cytotoxicity in vitro, whereas the leaf and branch extracts and the pure alkaloid braznitidumine were inactive. A crude methanol extract was subjected to acid-base fractionation aimed at obtaining alkaloid-rich fractions, which were active at low concentrations against P. falciparum and in mice infected with and sensitive Plasmodium berghei parasites. Our data validate the antimalarial usefulness of A. nitidum wood bark, a remedy that can most likely help to control malaria. However, the molecules responsible for this antimalarial activity have not yet been identified. Considering their high selectivity index, the alkaloid-rich fractions from the plant bark might be useful in the development of new antimalarials.     

Prevalence of Lyme Disease Borrelia spp. in Ticks from Migratory Birds on the Japanese Mainland

Borrelia sp. prevalence in ticks on migratory birds was surveyed in central Japan. In autumn, a total of 1,733 birds representing 40 species were examined for ticks. A total of 361 ticks were obtained from 173 birds of 15 species, and these ticks were immature Haemaphysalis flava (94.4%), Haemaphysalis longicornis, Ixodes columnae, Ixodes persulcatus, Ixodes turdus, and an unidentified Ixodes species. Of these, 27 juveniles of H. flava on Turdus pallidus, Turdus cardis, or Emberiza spodocephala, 2 juveniles of I. persulcatus on T. pallidus, and 1 female H. flava molted from a T. pallidus-derived nymph were positive for the presence of Borrelia by Barbour-Stoenner-Kelly culture passages. In spring, a total of 16 ticks obtained from 102 birds of 21 species were negative for the spirochete. Isolates from 15 ticks were characterized by 5S-23S rRNA intergenic spacer restriction fragment length polymorphism analysis; all isolates were identified as Borrelia garinii with pattern B/B′ based on the previous patterning. According to the intergenic spacer sequences, 2 of 15 isolates, strains Fi14f and Fi24f, were highly similar to B. garinii strains 935T of Korea and ChY13p of Inner Mongolia, China, respectively. These findings indicate that Lyme disease-causing B. garinii may have been introduced to Japan by migratory birds from northeastern China via Korea. Additionally, a case of transstadial transmission of B. garinii from nymph to adult H. flava suggests that the infected H. flava may transmit Borrelia to large animals.     

Orchids in the torrent: on the circumscription,conservation and rheophytic habit of Epipactis flava

The systematically difficult genus Epipactis (Orchidaceae) is often subdivided into two sections: Epipactis and Arthrochilium. Until now, the latter has attracted much less taxonomic attention than the former, but here we reassess the alleged distinction of two rare and nationally endangered taxa from tropical Asia (E. flava, E. atromarginata), based on morphological examination of live plants in situ in northern Thailand and of herbarium specimens from the entire range of the complex (Thailand, Laos and Vietnam). As the variation in vegetative and floral dimensions, flower colour and labellum morphology broadly overlaps between the two taxa, we merge them under the oldest valid name at species level, E. flava. Geomorphological features of our three study sites in Thailand and high shared occurrence of previously confirmed rheophytes among the accompanying species indicate that E. flava is itself rheophytic (a very rare feature in the Orchidaceae). Possible adaptations of E. flava to its rheophytic lifestyle are discussed. Among these, the formation of pure stands through dense clonal growth involving a creeping rhizome places E. flava as a ‘mat‐rooted rheophytic landplant’ (sensu van Steenis). Combining taxonomic, distributional and ecological data, we discuss the occurrence of this stream‐inhabiting Epipactis in a conservation context. © 2013 The Linnean Society of London, Botanical Journal of the Linnean Society, 2013, 172 , 358–370.     

Microbial Population Analysis of the Salivary Glands of Ticks; A Possible Strategy for the Surveillance of Bacterial Pathogens

Ticks are one of the most important blood-sucking vectors for infectious microorganisms in humans and animals. When feeding they inject saliva, containing microbes, into the host to facilitate the uptake of blood. An understanding of the microbial populations within their salivary glands would provide a valuable insight when evaluating the vectorial capacity of ticks. Three tick species (Ixodes ovatus, I. persulcatus and Haemaphysalis flava) were collected in Shizuoka Prefecture of Japan between 2008 and 2011. Each tick was dissected and the salivary glands removed. Bacterial communities in each salivary gland were characterized by 16S amplicon pyrosequencing using a 454 GS-Junior Next Generation Sequencer. The Ribosomal Database Project (RDP) Classifier was used to classify sequence reads at the genus level. The composition of the microbial populations of each tick species were assessed by principal component analysis (PCA) using the Metagenomics RAST (MG-RAST) metagenomic analysis tool. Rickettsia-specific PCR was used for the characterization of rickettsial species. Almost full length of 16S rDNA was amplified in order to characterize unclassified bacterial sequences obtained in I. persulcatus female samples. The numbers of bacterial genera identified for the tick species were 71 (I. ovatus), 127 (I. persulcatus) and 59 (H. flava). Eighteen bacterial genera were commonly detected in all tick species. The predominant bacterial genus observed in all tick species was Coxiella. Spiroplasma was detected in Ixodes, and not in H. flava. PCA revealed that microbial populations in tick salivary glands were different between tick species, indicating that host specificities may play an important role in determining the microbial complement. Four female I. persulcatus samples contained a high abundance of several sequences belonging to Alphaproteobacteria symbionts. This study revealed the microbial populations within the salivary glands of three species of ticks, and the results will contribute to the knowledge and prediction of emerging tick-borne diseases.     

Kinos of Eucalyptus species and their acid degradation products

The kinos of Eucalyptus astringens, E. lehmannii and E. platypus contain mainly polymerized leucocyanidin, appreciable amounts of dihydrokaempferol 3-rhamnoside and trace amounts of other components, The acid degradation products of different kinos contained components not present in the products from wood and bark. These include phloroglucinol and two other components whose properties are described.     

Defense mechanisms of conifers : relationship of monoterpene cyclase activity to anatomical specialization and oleoresin monoterpene content

Cell-free extracts from Pinus ponderosa Lawson (ponderosa pine) and Pinus sylvestris L. (Scotch pine) wood exhibited high levels of monoterpene synthase (cyclase) activity, whereas bark extracts of these species contained no detectable activity, and they inhibited cyclase activity when added to extracts from wood, unless polyvinylpyrrolidone was included in the preparation. The molecular mass of the polyvinylpyrrolidone added was of little consequence; however, polyvinylpolypyrrolidone (a cross-linked insoluble form of the polymer) was ineffective in protecting enzyme activity. Based on these observations, methods were developed for the efficient extraction and assay of monoterpene cyclase activity from conifer stem (wood and bark) tissue. The level of monoterpene cyclase activity for a given conifer species was shown to correlate closely with the monoterpene content of the oleoresin and with the degree of anatomical complexity of the specialized resin-secreting structures. Cyclase activity and monoterpene content were lowest in the stems of species containing only isolated resin cells, such as western red cedar (Thuja plicata D. Don). Increasing levels of cyclase activity and oleoresin monoterpenes were observed in advancing from species with multicellular resin blisters (true firs [Abies]) to those with organized resin passages, such as western larch (Larix occidentalis Nutt.), Colorado blue spruce (Picea pungens Engelm.) and Douglas-fir (Pseudotsuga menziesii [Mirb.] Franco). The highest levels of cyclase activity and oleoresin monoterpenes were noted in Pinus species that contain the most highly developed resin duct systems. The relationship between biosynthetic capacity, as measured by cyclase activity, monoterpene content, and the degree of organization of the secretory structures for a given species, may reflect the total number of specialized resin-producing cells per unit mass of stem tissue.     

Naphthoquinones and triterpenes from african Diospyros species

Investigation of the bark and/or wood of seventeen African species of Diospyros has revealed the presence of a number of triterpenes and naphthoquinones. The triterpenes lupeol, betulin and betulinic acid were detected in all samples but three other triterpenes were each found in only one species; betulinaldehyde in D. canaliculata, cerin in D. iturensis, and glutinol in D. zenkeri. Naphthoquinones were detected in fourteen of the seventeen species and the common dimeric compounds diospyrin, isodiospyrin and diosindigo-A were isolated. D. canaliculata differed from all other species in producing derivatives of plumbagin including its reduced form, isoshinanolone (1R,2R) and a novel stereoisomer which was given the trivial name epiisoshinanolone (1S,2R).     

Isolation and characterization of microsatellite loci in the threatened wild toad lily Tricyrtis flava (Liliaceae)

Twelve polymorphic microsatellite loci were isolated and characterized from the threatened toad lily Tricyrtis flava. The number of alleles ranged from three to 17, and the observed and expected heterozygosities ranged from 0.35 to 0.96 and from 0.50 to 0.93, respectively, in a population of T. flava. We also tested cross‐species amplifications of the markers in three other species of Trycyrtis sect. Flavae. Most of 12 markers developed for T. flava were successfully amplified in the species of sect. Flavae and will be useful for population genetic studies of these species.     

Detachment of hard ticks (Acari: Ixodidae) from hunted sika deer (Cervus nippon)

Ixodid ticks were collected from 13 sika deer, Cervus n. nippon, shot in the Boso Peninsula in central Japan from late February to early March 1999. Haemaphysalis megaspinosa was the most abundant species of the adults collected, although Haemaphysalis longicornis, H. flava, H. kitaokai, H. cornigera, Ixodes ovatus, and Amblyomma testudinarium were also collected. Males were more abundant than females for H. longicornis, H. megaspinosa, H. flava, and H. kitaokai. Ticks that had inserted their hypostome into its host skin (designated attached) were distinguished from those that were detached and on the host’s surface. A greater fraction of males than females of all four species were detached. Females were classified in three feeding stages (engorged, partially engorged, and unfed). More H. longicornis and H. megaspinosa unfed female ticks than engorged and partially-engorged female ticks were collected detached. Our results indicated that H. megaspinosa, H. longicornis, H. flava, and H. kitaokai male ticks detached sooner than female ticks after their host died.     

Asp-376-Glu substitution endows target-site resistance to AHAS inhibitors in Limnocharis flava,an invasive weed in tropical rice fields

Limnocharis flava (L.) Buchenau is a problematic weed in rice fields and water canals of Southeast Asia, and in Malaysia this invasive aquatic weed species has evolved multiple resistance to synthetic auxin herbicide and acetohydroxyacid synthase (AHAS) inhibitors. In this study, it was revealed that, a single nucleotide polymorphism (SNP) at amino acid position 376, where C was substituted to G at the third base of the same codon (GAC to GAG), resulting in Aspartate (Asp) substitution by Glutamate (Glu) was the contributing resistance mechanism in the L. flava population to AHAS inhibitors. In vitro assay further proved that, all the L. flava individuals carrying AHAS resistance mutation exhibited decreased-sensitivity to AHAS inhibitors at the enzyme level. In the bensulfuron-methyl whole-plant bioassay, high resistance indices (RI) of 328- and 437-fold were recorded in the absence and presence of malathion (the P450 inhibitor), respectively. Similarly, translocation and absorption of bensulfuron-methyl in both resistant and susceptible L. flava populations showed no remarkable differences, hence eliminated the possible co-existence of non-target-site resistance mechanism in the resistant L. flava. This study has confirmed another new case of a target-site resistant weed species to AHAS-inhibitors.     

Three new species of Cobaea (Polemoniaceae)

Revisionary work has revealed three new species ofCobaea:Cobaea flava of northern Peru,C. paneroi of central Mexico, andC. rotundiflora of Guatemala and extreme southeastern Mexico.Cobaea flava is most similar toC. campanulata and differs mainly in its pedicel pubescence, corolla coloration, and stamen position.Cobaea paneroi is among the large-flowered species (theCobaea scandens group) but is easily distinguished from these by its long-acuminate calyx segments.Cobaea rotundiflora most closely resemblesC. triflora. It differs mainly in its corolla coloration and wider, pubescent calyx segments.     

Association of Geosmithia fungi (Ascomycota: Hypocreales) with pine- and spruce-infesting bark beetles in Poland

Bark beetles (Coleoptera, Scolytinae) are known to be associated with fungi, particularly species of the orders Ophiostomatales and Microascales. However, very little is known about other ectosymbionts of phloeophagous bark beetles on Pinaceae. In this study, we examined the Geosmithia species associated with eight bark beetle species infesting Picea abies and Pinus sylvestris branches in Poland. Fungi were isolated from 1 731 samples collected from 14 study sites. We identified a total of 653 isolates that were sorted into nine taxa based on their phenotypic similarity and phylogeny of their ITS-LSU regions of rDNA, β-tubulin, elongation factor 1α and the second-largest subunit of the RNA polymerase II gene. They represented nine species without formal names. There were large quantitative and qualitative differences in the composition of Geosmithia communities between P. sylvestris and P. abies trees. The proportion of samples infested with Geosmithia species suggests that this association is more widespread among bark beetles infesting branches of P. sylvestris. In addition, these beetles were vectors of different Geosmithia species compared with than the beetles that colonize P. abies. In mixed-conifer forests, the Geosmithia communities were more diverse and richer than in pure spruce or pine stands, where the insects Pityogenes chalcographus and Pityophthorus pityographus with low host-specificity play a distributing role for various Geosmithia species. Among eight bark beetle species examined, only P. bidentatus, P. pityographus, P. chalcographus and Polygraphus poligraphus acted as effective vectors for Geosmithia species. The following hypothesis emerges from these studies: changes in the composition of ectosymbionts of pine- and spruce-infesting bark beetles in Central Europe run along a gradient of thickness of the wood substrata preferred by insects.     

Isoquinoline-derived alkaloids from the bark of Guatteria olivacea (Annonaceae)

Phytochemical investigation of the bark of Guatteria olivacea R. E. Fries (Annonaceae) led to the isolation and identification of ten isoquinoline-derived alkaloids, including three phenanthrenes, atherosperminine, argentinine, and atherosperminine N-oxide; three aporphines, asimilobine, puterine, and discoguattine; two oxoaporphines, liriodenine and oxoputerine; and two tetrahydroprotoberberines, corypalmine and discretine. All these alkaloids are described for the first time in G. olivacea and their chemotaxonomic significance was discussed. The structure elucidation of these isolated alkaloids was established by extensive analyses of 1D and 2D NMR spectroscopy in combination with MS. The NMR data for atherosperminine, argentinine, and atherosperminine N-oxide were reviewed.     

Production of alkanes (C7–C29) from different part of poplar tree via direct deoxy-liquefaction

Poplar leaves, poplar bark and poplar wood were deoxy-liquefied directly in an air-proof stainless steel reactor at different temperatures. The oils from leaves at 350 °C, from bark at 400 °C and from wood at 450 °C, at which the liquid product yields were the maximum, were analyzed by GC–MS. The oils obtained from three parts of poplar tree were quite different from each other in the relative contents of their compositions. The oil from leaves was rich in hydrocarbons (alkanes: C₇–C₂₉; aromatics) and poor in phenolics, while oil from wood was rich in phenolics and poor in hydrocarbons. The oil from bark was moderate. Relative contents of hydrocarbons in the leaves oil were as high as 60.01% but decreased to 29.71% in bark oil and 11.43% in wood oil. GC analysis of gases and FT-IR, GC–MS and elemental analysis of oils were performed in this study.     

Hard Ticks as Vectors Tested Negative for Severe Fever with Thrombocytopenia Syndrome in Ganghwa-do,Korea during 2019–2020

This study aimed to characterize the seasonal abundance of hard ticks that transmit severe fever with thrombocytopenia syndrome virus from April to November 2019 and 2020 on Ganghwa-do, Incheon Metropolitan City, Korea. The ticks were collected at grassland, grave site, copse and mountain road using a collection trap method. The ixodid hard ticks comprising three species (Haemaphysalis longicornis, H. flava, and Ixodes nipponensis) collected were 6,622 in 2019 and 3,811 in 2020. H. longicornis was the most frequent (97.9% in 2019 and 96.0% in 2020), followed by H. flava (2.0% and 3.0% in 2019 and 2020, respectively) and I. nipponensis (less than 0.1%). Our study demonstrated that seasonal patterns of the tick populations examined for two years were totally unsimilar. The hard ticks tested using RT-qPCR were all negative for severe fever with thrombocytopenia syndrome virus.     

Pattern of Substrate Preferences of Free Living Protists (Myxomycetes) on Decaying Wood

We have studied the influence of the stage of decomposition and acidity of wood, as well as the illumination of the microhabitat on the species composition, abundance, and occurrence of slime molds (Myxomycetes) of the xylobiontic (inhabitants of the wood) substrate complex of forest communities in Siberia (Altai krai, Altai Republic, and Novosibirsk oblast). This work is based on a study of 1777 samples of fruit bodies (sporophores) of myxomycetes. In the analysis of data for communities of Myxomycetes of the xylobiontic substrate complex, we recognize a successional series which clearly correlates with the stage of wood decomposition. The study of the distribution of the species composition of the slime mold on wood of various stages of decomposition shows that the maximum number of species is observed on dead trunks where the wood is of medium density and the bark can easily be separated (W3). The lowest specificity and diversity of species composition is observed on the fallen trunks of trees with very dense wood and dense bark (W1). These dead trees have low water-retaining capacity, tight bark, and almost intact wood containing large amounts of lignin, preventing the invasion of plasmodia and myxamoebae of Myxomycetes into the trunk. A study of the location of slime-mold colonies in relation to the illumination level shows that the greatest number of species is found on the front, side, and bottom parts of dead trunks of woody plants. The least specificity and the least variety of Myxomycetes species are found on apical parts of dead tree trunks facing the sun. The exception are species with large fruit bodies such as Fuligo septica and Reticularia splendens, which are most often observed on the upper parts of the sun facing trunks of woody plants. In the research area, the complex of species typical for wood of coniferous trees is described. It is noted that acidophilic slime molds of the genera Comatricha and Cribraria can be traced in xylobiontic and epiphytic–corticuloid substrate complexes.     

Occurrence of N-cyano alkaloids in asian Strychnos species

The isolation of N-cyano-sec.-pseudostrychnine and N-cyano-sec.-pseudobrucine from the leaves of Strychnos wallichiana Steud. ex. DC. is reported. N-Cyano-sec.-pseudostrychnine and a N-cyano-sec.-pseudo-colubrine have been found among the alkaloids obtained from the stem bark of S. ignatii Berg.