Photosynthetic glow peaks and their relationship with the free energy changes

This paper is concerned with relating thermoluminescence to the total free-energy change, G, involved in detrapping a particular electron-hole pair as a photosynthetic sample is warmed from an initial low temperature. It extends a mathematical discussion of four possible mechanisms introduced in an earlier paper [DeVault, Govindjee and Arnold, Proc Nat'l Acad Sci USA 80: 983–987 (1983)]; here, particular attention is paid to the dependence of the absolute temperature of the maximum of a glow-peak, T _m , on the total free-energy change, G. The conclusion from the cases studied is that T _m =G/(k _B W) where G is evaluated at T _m , W is a complicated function of temperature and of thermodynamic parameters in the steps of the mechanism, and k _B is the Boltzmann constant. If the rate limiting step in the mechanism of detrapping is not preceded by any step in which G is appreciably negative, W is likely to have a value of about 33 and T _m is approximately proportional to G. Otherwise W can become much smaller and more strongly dependent on temperature and T _m is no longer proportional to G. These conclusions are of significance in lending theoretical support to the practice of inferring redox midpoint potential changes from shifts in T _m .     

Growth and Respiration in Plants from Various Adaptation Groups as Affected by Mineral Nutrient Deficiency

The effect of the deficiency in mineral nutrients was investigated in plant species representing various adaptation groups (stress-tolerant, competitive, and ruderal plants). Dry and fresh weight, as well as the length of shoots and underground organs, were determined in 20- to 50-day-old seedlings. The ratio between the dry weights of shoot and root (SRR), relative growth rate (RGR), the rate of total dark respiration (R), gross photosynthesis (P _g), and the proportion of the respiratory expenditures to gross photosynthesis (R/P _g) were calculated. When affected by a deficiency in mineral nutrients, the weight of the whole plant decreased. In resistant species of clover (Trifolium pratense L.) and alfalfa (Medicago sativa L.), this reduction was insignificant, whereas, in the ruderal species amaranth (Amaranthus retroflexus L.), it was at its highest. In all the species investigated, the ratio R/P _g was 38–46%. Under stress conditions, this index increased. Given a deficiency in mineral nutrients, the changes in SRR, RGR, and R/P _g were greater in amaranth, suggesting that this plant species is less tolerant to stress. The correlation between RGR and R observed in amaranth under normal conditions indicates that the major energy expenditures are associated with growth. Under stress conditions, such a correlation was not observed. In more resistant species of clover and alfalfa, a weak positive correlation between RGR and R was observed both under normal and stress conditions. In these species, the deficiency in mineral nutrients probably brought about a reduction in the growth component of total dark respiration and a rise in the adaptation component. The complex of indices (R/P _g, RGR, and SRR) and the extent of their variation in the seedlings describe the potential productivity and resistance of particular species to a deficiency in mineral nutrients and may characterize the adaptation type of the plants.     

Foam behavior of biological media

Summary The surface tension and foaminess of (a) unlimited, (b) substrate limited, and (c) oxygen transfer limited growth media of Hansenula polymorpha were measured using methanol, ethanol or glucose as a substrate.The time dependence of can be described by the Avrami-Überreiter relationship: log (2.3 log V)=n log t+log b, where V = (_O – _eq/(_t – _eq, and _O, _t and _eq are at t_M=0, t_M=t and t_M (equilibrium value).The constants n and b are functions of the fermentation time t_F as long as the growth is unlimited but they are constant in the state of limited growth. With glucose substrate, the foaminess can be presented as a definite function of the time, t_DG, which is necessary to attain _eq. With alcohol as a substrate no definite (t_DG) function was found.Symbols b constant in Eq. (1) - n constant in Eq. (1) - S substrate concentration - T temperature - t_M time h (measured from the beginning of the determination of the surface tension ) - t_F cultivation time h (measured from the time of inoculation) - t_DG time (min) necessary to attain the equilibrium surface tension ) - X dry biomass concentration (gl^–1) - V (_O – _eq)/(_t – _eq) - V_S equilibrium volume of the foam (cm³) - V_G volumetric gas flow rate during the estimation of (cm³ s^–1) - vvm volumetric gas flow rate with regard to the volume of the medium (min^–1) - w_SG superficial gas velocity (cm s^–1) - _m maximum specific growth rate (h^–1) - V_S/V_G foaminess (s) - surface tension, mMm^–1 (milli Newton m^–1) - _O at t_M=0 - _eq equilibrium surface tension ( at t_M) - _t at t_M=t - HP probes from Hansenula polymorpha cultivation - NLG non limited growth - OTLG oxygen transfer limited growth - SLG substrate limited growth     

Assessment of the Respiratory Costs of Adaptation in Plant Species That Differ in Their Responses to Insufficient and Excessive Mineral Nutrition

The effects of insufficient and excessive mineral nutrition on the relative growth rate (RGR); the rate of total dark respiration (R); gross photosynthesis (Pg); and the contents of endogenous IAA, ABA, and cytokinins (CK) were studied in 20–60-day-old seedlings of plant species that differed in their responses to these factors: beet root (Amaranthus retroflexusL.), orchard-grass (Dactylis glomerataL.), and common wheat (Triticum aestivumL.). The changes in the level of mineral nutrition lowered the RGR and Pgvalues and the IAA/ABA and CK/ABA ratios and increased the Rand R/Pgvalues and ABA content, especially in A. retroflexusand T. aestivum. The authors propose a new way to assess the respiratory cost of adaptation to stress based on the relation between the RGR and the R/Pgvalues. The adaptation component of Ris shown to relate to the ABA content.     

Elevated CO2 and the magnitude and seasonal dynamics of root production and loss in t Betula papyrifera

The impact of elevated atmospheric CO₂ on belowground plant growth is poorly understood relative to its effects on aboveground growth. We carried out a study of the seasonal dynamics of gross root production and death to determine how elevated CO₂ affected the dynamics of net and gross root production through a full growing season. We quantified gross root production and root loss from sequential, in situ images of fine roots of t Betula papyrifera in ambient (375 ppm.) and elevated (700 ppm) CO₂ atmospheres from 2 weeks following germination through leaf senescence. We found that elevated CO₂ led to increases in the magnitude of cumulative gross production (P) and cumulative gross loss (L) of roots. However, the effect of elevated CO₂ on these processes was seasonally dependent. Elevated CO₂ led to greater levels of enhancement in P early in the growing season, prior to maximum standing root length (NP). In contrast, elevated CO₂ led to greater levels of enhancement in L in the last half of the growing season, after maximum NP had been reached. This difference in the timing of when elevated CO₂ affects P and L led to a transitory, early enhancement in NP. By the end of the growing season, there was no significant effect of elevated CO₂ on NP, and P was 87% greater than NP for ambient CO₂ and 117% greater in elevated CO₂. We conclude that static assessments of belowground productivity may greatly underestimate gross fine root productivity and turnover and this bias can be exaggerated with elevated CO₂.     

Studies on the chemical composition of isolated soil solution and the cation absorption by plants

Summary The effects were studied of varying amounts and forms of N fertilizers on the chemical composition of soil solution and on the uptake of N, K, Na, Ca and Mg by barley.In isolated soil solution the concentrations as well as the ratios of individual cations depended on form and amount of added nitrogen. The concentration of cations increased proportionally with applications of nitrate+sulphate. Cation-activity ratios in isolated soil solution were governed by the ratios of corresponding exchangeable cations. During the entire growth period the absorption by the plants of individual as well as of cations was independent of their concentrations in soil solution. So long as NH₄ ions were present in the soil solution, plants with NH₄ addition contained less cations than those with NO₃ addition. Thereafter the amounts of cations in the plant were closely correlated with N absorption, but not affected by form of applied N. The ratios K/(Ca+Mg) and Ca/Mg in the plant were closely correlated with corresponding activity ratios but independent of concentration ratios of these ions in isolated soil solution. It is postulated that uptake of cations is governed by N-metabolic processes in the plant, whereas ratios of absorbed cations are influenced by cation-activity ratios in the soil solution.     

Distribution of greenhouse gases, nitrite, and δ13C of dissolved inorganic carbon in Lake Biwa: Implications for hypolimnetic metabolism

The vertical distribution of dissolved greenhouse gases (CH₄,CO₂ and N₂O), NO ,and ¹³C of CO₂ in Lake Biwa during a stagnantperiod was precisely determined. CO₂ as well as NO was accumulated in the hypolimnion, whereas NO and CH₄concen\-trations were generally higher in theepilimnion than in the hypolimnion. In August, NO andCH₄ were ephemerally accumulated at the thermocline. Theconcentration of CH₄ always exceeded equilibrium with respectto air/water exchange. N₂O was rather uniformly distributed inboth time and space, and remained near equilibrium with respect toair/water exchange. All of these observations are similar to otherstratified, oligotrophic lakes, in which the hypolimnia were welloxygenated. The ¹³C of CO₂ became morenegative with increasing depth, and showed a strong negativecorrelation with apparent oxygen utilization. From the data, the ¹³Cvalue of organic matter decomposed into CO₂ inthe hypolimnion was calculated by isotope mass-balance, and found tobe in a similar range to ¹³C of phytoplankton and benthic algaeand distinctively higher than ¹³C of both terrestrial andsedimentary organic matters. This suggests that autochthonous organicmatter was the major source of CO₂.     

Comparison of Some Photosynthetic Characters Between Two Hybrid Rice Combinations Differing in Yield Potential

Photosynthetic characteristics of two hybrid rice combinations, Peiai 64S/E32 and Shanyou 63, were compared at the panicle differentiation stage. As compared with Shanyou 63, the new combination Peiai 64S/E32 showed a significantly higher net photosynthetic rate (P _N), apparent quantum yield of carbon assimilation (_c), carboxylation efficiency (CE), and photorespiratory rate (R _P) as well as leaf chlorophyll content, but a significantly lower dark respiration rate (R _D) and compensation irradiance (I _c). It also showed a slightly higher photochemical efficiency (F_v/F_m and F/F_m) of photosystem 2, a lower non-photochemical quenching (q_N), and a similar CO₂ compensation concentration () as compared to Shanyou 63.     

Distance-constraint approach to higher-order structures of globular proteins with empirically determined distances between amino acid residues

An analysis of higher-order structures of globular proteins by means of a distance-constraint approach is presented. Conformations are generated for each of 21 test proteins of small and medium sizes by optimizing an objective functionf=w _ij(d _ij–d _ij)², whered _ij is a distance between residuesi andj in a calculated conformation, d _ij is an assigned distance to the (ij) pair of residues which is determined based on the statistics of known three-dimensional structures of 14 proteins in the earlier study, andw _ij is a weighting factor. d _ij involves information about hydrophobicity and hydrophilicity of each amino acid residue and about connectivity of a polypeptide chain. In these calculations, only the amino acid sequence is used as input data specific to a calculated protein. With respect to higher-order structures regenerated in the optimized conformations, the following properties are analyzed: (a) N14 of a residue, defined as the number of residues surrounding the residue located within a sphere of radius of 14 Å; (b) root-mean-square differences of the global and local conformations from the corresponding X-ray conformations; (c) distance profiles in the short and medium ranges; and (d) distance maps. The effects of supplementary information about locations of secondary structures and disulfide bonds are also examined to discuss the potential ability of this methodology to predict the three-dimensional structures of globular proteins.     

Belastung des Kiebitzes (Vanellus vanellus) mit Dieldrin und anderen chlorierten Kohlenwasserstoffen

Zusammenfassung 45 Eier und 8 Kükenlebern des Kiebitzes aus den Jahren 1984 und 1986 wurden auf -, -, -HCH, HCB, DDT, Dieldrin, Endrin und PCB untersucht. Hohe Konzentrationen an Dieldrin wurden in den Eiern gefunden, während die Lebern von Kiebitzküken geringer belastet waren. Die geringen Konzentrationen der übrigen Pestizide und die mäßige an PCB entsprachen der niedrigen Trophieebene des Kiebitzes. Die Frage, ob die Belastung mit Dieldrin einen Einfluß auf den Rückgang von Kiebitzpopulationen in einigen Gebieten haben könnte, wird kurz diskutiert.

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The burden of Dieldrin and other chlorinated hydrocarbons on the Lapwing (Vanellus vanellus)

Summary -, -, -HCH, HCB DDT, Dieldrin, Endrin, and PCB were determined in 45 eggs and 8 livers of young Lapwings in 1984 and 1986. High concentrations of Dieldrin were found in eggs while those in livers of young Lapwings were lower. The low residues of the other pesticides and the moderate ones of PCB are in accordance with the low trophic level of the Lapwing. The probable influence of the Dieldrin burden on the decline of Lapwing populations in several regions is discussed briefly.

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Gefördert mit Hilfe von Forschungsmitteln des Landes Niedersachsen     

Hydrobiology and organic production in a marl lake of Kashmir Himalayan Valley

L. Naranbagh (alt. 1587 m) is a polymictic, shallow marl lake in the flood-plain valley of Kashmir, India. Macrofloral affinities resemble Potamogeton Type of Forsberg (1965) with alkaline waters, not rich in phosphorus. CaCO₃ precipitation coupled with decline in Ca²⁺ and alkalinity values are characteristic of the lake. Fluctuations in Mg²⁺, Na⁺, K⁺, and Cl^– were relatively conservative. The levels of PO _inf4 ^sup3– -P and NO _inf3 ^sup– -N indicate moderate fertility of the lake water.Persistence of a summer-autumn planktonic algal pulse is related to favourable irradiance, high water temperatures, and increased photosynthetic efficiency values. The most striking seasonality in photosynthetic rates (m^–2 h^–1) between winter minimum (3 mg C_assim) and summer maximum (75.4 mg C_assim) is determined by mainly climatic changes. Energy flow gave annual phytoplankton production of 51.95 × 10² KJ m^–2 for the ecosystem.The nutrient levels and productivity rates suggest mesotrophic status of L. Naranbagh in classic oligoeutrophic classification of lake types.     

Foam behavior of biological media

Summary The influence of the alcohol concentration on the foaminess, , of-BSA-solutions is considered. This effect is calculated by means of the function (C_BSA . f), where f=1 for pure protein solutions and f>1 for alcohol solutions. f is calculated by f = 2^TT_eff. Here, where T_T is the turbidity temperature change due to solvent structure effects and T_D, the temperature correction due to alcohol-protein interaction. The constants necessary to calculate T_T and T_D are tabulated. The agreement between the calculated and measured foaminess , as a function of the n-propanol concentration is satisfactory and for methanol or ethanol excellent.     

Influence of the pH on the photodynamic effect in lysozyme A comparative kinetic study with the sensitized photooxidation of isolated amino acids

Summary The kinetics of the eosin-sensitized photooxidation ([O₂(¹_g)]-mediated) of the protein lysozyme (Lyso) was investigated under two different pH conditions (pH 7 and pH 11). Rates of oxygen consumption and the fade in the protein fluorescence spectrum upon sensitized irradiation were monitored. Parallel studies on both denatured Lyso (absence of the four-S-S- bridges in the protein) and different mixtures of the photooxidizable amino acids of Lyso were also carried out. The mixtures maintained the same molar ratio as in the native protein, and were selected just in order to throw into relief the preferential amino acids that were being photooxidized at both pH values.Under work conditions Lyso was only photooxidizable at pH 7, whereas the opposite accounted for the denatured protein: only measurable oxygen consumption was detected at pH 11. Nevertheless, Lyso at pH 11, evidenced an important physical quenching of O₂(¹_g) due to the Tyr and Trp residues.The results for the native protein were interpreted on the basis of a previously described dark complex Eosin-Lyso, which selectively favours the photooxidation of the bounded protein. The Trp residues were the main reactive entities in the native protein. The photodinamic effect in denatured Lyso was characterized by the prevalence of Tyr residues as photooxidizable targets.In the discussion of the results, a comparisson with the photooxidation kinetics of the mixtures of free amino acids was made.Abbreviations O₂(³_g ^–) ground state triplet oxygen - O₂(¹_g) singlet molecular oxygen - Lyso lysozyme - LysoD denatured lysozyme - Eos eosin - FFA furfuryl alcohol - Trp tryptophan - Tyr tyrosine - Cys cysteine - Cis cystine - Met methionine - His histidine - AA amino acid - a.u. arbitrary units     

Occurrence of organochlorine contaminants in tissues of the coelacanth Latimeria chalumnae

Synopsis Gas chromatography coupled with electrolytic conductivity detection and electron capture negative chemical ionization mass spectrometry have been used to identify and quantify organochlorine xenobiotics in tissues from two specimens of the living coelacanth Latimeria chalumnae. Compounds identified include polychlorinated biphenyls (PCB), 4,4-DDT and its metabolites 4,4-DDD and 4,4-DDE. Levels of these compounds in the specimens were observed to be generally related to tissue lipid content. Highest concentrations of the xenobiotics were present in the lipid-rich swim bladder, followed by adipose tissue and liver. Levels ranged from 89 to 510 g kg^–1 for PCB and 210 to 840 g kg^–1 for -DDT (including DDD and DDE) on a wet-weight basis. Organochlorine concentrations in relatively lipid-poor tissues, i.e. muscle and kidney, were lower. Parent DDT contributed significantly to the -DDT burden. PCB congeners containing five to seven chlorines were most prevalent. Component distributions did not match those present in common commercial PCB formulations. However, major congeners observed were similar to those reported for other fishes.     

Carbon and nitrogen cycling in intertidal sediments near Doel,Scheldt Estuary

Carbon and nitrogen cycling in intertidal mud flat sediments in the Scheldt Estuary was studied using measurements of carbon dioxide, methane and nitrous oxide emission rates and pore-water profiles of CO₂, ammonium and nitrate. A comparison between chamber measured carbon dioxide fluxes and those based on CO₂ pore-water gradients using Fick's First law indicates that apparent diffusion coefficients are 2 to 28 times higher than bulk sediment diffusion coefficients based on molecular diffusion. Seasonal changes in gaseous carbon fluxes or CO₂ pore water concentrations cannot be used directly, or in a simple way, to determine seasonal rates of mineralization, because of marked seasonal changes in pore-water storage and exchange parameters.The annual amount of carbon delivered to the sediment is 42 mol m^–2, of which about 42% becomes buried, the remaining being emitted as methane (7%) or carbon dioxide (50%). Each year about 2.6 mol N m^–2 of particulate nitrogen reaches the sediment; 1.1 mol m^–2 is buried and 1.6 mol m^–2 is mineralized to ammonium. Only 0.42 mol m^–2 yr^–1 of the ammonium produced escapes from the sediments, the remaining being first nitrified (1.2 mol m^–2 yr^–1) and then denitrified (1.7 mol m^–2 yr^–1). Simple calculations indicate that intertidal sediments may account for about 14% and 30% of the total estuarine retention of nitrogen and carbon, respectively.     

Pyrite accumulation in salt marshes in the Eastern Scheldt,southwest Netherlands

Pore water composition, pyrite distribution and pyrite crystal morphology of sediments from salt marshes in the Eastern Scheldt, southwestern Netherlands, were examined from July 1984 to October 1986.Hydrology and marsh vegetation were the chief determinants of pyrite accumulation. In the bare sediments of pans in the low marsh, highly reducing conditions prevailed just below the surface. At these sites, practically all the incoming detrital pyrite (0.5–1% FeS₂) was preserved. The in-situ formation of pyrites was negligible in these anoxic sediments.All incoming detrital pyrite was oxidized in the surface layers (0–10 cm) of the medium-high marsh overgrown withSpartina anglica. Pyrite was formed at a rate of 2.6–3.8 mol S-FeS₂m^–2yr^–1 in a narrow range of depths (15–20cm), at the interface of the oxidizing and underlying reducing sediment. At this interface the concentration profiles of Fe²⁺ and dissolved S intersected. The role of the rhizosphere is discussed in connection with pyrite formation. No further pyrite formation occurred deeper in the sediment. This resulted in the build up of high concentrations of dissolved S and acid volatile sulfides (AVS). The decrease with depth in oxalate-extractable Fe indicated that most of the iron oxyhydroxides (70–80%) had been transformed to pyrite. Another 10–20% of oxalate-extractable Fe was present as AVS. The abundance of framboidal pyrite particles and the high concentrations of AVS and dissolved S indicated that the formation of pyrite occurred via iron monosulfide intermediatesThere was a linear relationship between the organic carbon and the S-FeS₂ content in theSpartina overgrown reducing sediment. The mean C/S ratio was 4.2.     

Monoclonal antibody specific for α2→8-linked oligo deaminated neuraminic acid (KDN) sequences in glycoproteins. Preparation and characterization of a monoclonal antibody and its application in immunohistochemistry

Two particular types of sialoglycoproteins have been detected in fish: polysialoglycoproteins containing 28-linked polysialic acid (8Neu5Gc2) _n present in unfertilized Salmonidae fish eggs, and glycoproteins bearing oligo/polymers of deaminated neuraminic acids (KDN) found in the vitelline envelope of the eggs and ovarian fluid. We report the preparation and characterization of a monoclonal antibody specifically recognizing oligo/polymers of KDN sequences in glycoproteins and its application in immunohistochemistry. Fusion of spleen cells from a BALB/c mouse immunized with a KDN-rich glycoprotein (KDN-gp) containing (8KDN2) _n 6(KDN23Gal13GlNAc13) GalNAc1 residues, with mouse myeloma cells yielded a hybrid cell line producing a monoclonal antibody that bound to KDN-gp, but not to KDN-gp depleted of KDN residues. The specificity of the monoclonal antibody, designated mAb.kdn8kdn, was determined by an enzyme-linked immunosorbent assay using KDN-gp samples that varied in KDN content. These antigens were prepared by the selective removal of KDN residues from the native KDN-gp. The mAb.kdn8kdn reacted most strongly with the intact KDN-gp and less strongly with KDN-gp samples containing decreased numbers of KDN residues. The mAb.kdn8kdn was shown specifically to recognize the 28-linked oligo/polyKDN sequences, (8KDN2) _n , and to be able to distinguish specifically (8KDN2) _n chains from (8Neu5Ac2) _n and (8Neu5Gc2) _n chains. The antibody was used successfully for the immunohistochemical detection of reactive KDN epitopes in sections of paraffin embedded rat pancreas. Several controls verified the specificity of the immunohistochemical staining, thus providing the first demonstration of (8KDN2) _n sequences in a mammalian tissue. The mAb.kdn8kdn can now be used to search further for glycoconjugates containing (8KDN2) _n chains and will facilitate studies on their biosynthesis, intracellular localization and function.     

Biogeochemical cycling of sulfur and iron in sediments of a south-east Asian mangrove,Phuket Island,Thailand

Benthic sulfate reduction and sediment pools of sulfur and iron were examined during January 1992 at 3 stations in the Ao Nam Bor mangrove, Phuket, Thailand. Patterns of sulfate reduction rates (0–53 cm) reflected differences in physical and biological conditions at the 3 stations, and highest rates were found at the vegetated site within the mangrove (Rhizophora apiculata) forest. Due to extended oxidation of mangrove sediments, a large portion of the added³⁵S-label was recovered in the chromium reducible pools (FeS₂ and S⁰) (41–91% of the reduced sulfur). Pyrite was the most important inorganic sulfur component, attaining pool sizes 50–100 times higher than acid volatile pools (FeS). HCl-extractable (0.5 M HCl) iron pools, including Fe(II)_HCl and Fe(III)_HCl, were generally low and Fe(III)_HCl was only present in the upper surface layers (0–5 cm). Maximum concentrations of dissolved Fe²⁺ (35–285 M) occurred just about the depth where dissolved H₂S accumulated. Furthermore Fe²⁺ and H₂S coexisted only where concentrations of both were low. There was an accumulation of organic sulfur in the deep sediment at 2 stations in the inner part of the mangrove. The reoxidation of reduced sulfides was rapid, and storage of sulfur was minor in the upper sediment layers, where factors like bioturbation, the presence of roots, or tidal mixing enhance oxidation processes.Author of correspondence.     

Daily activity and body temperature

Body temperature varies between 36 and 39° C in states ranging from sleep to high levels of sustained exercise, but it is not known whether this continuum of body temperature is related to a continuum of activity. Calorimetric studies of sedentary days were undertaken with four levels of food intake, men doing mild sustained exercise, and men and women walking and cycling vigorously. Steady states of metabolism were followed by slow exponential changes to steady states of heat loss (Q), followed in turn by changes in rectal temperature (T _re). Regression analysis showed a continuous, curvilinear relationship between Q andT _re from the low end of the activity spectrum (50 W) to progressively higher levels of exercise (600 W). These related continua of activity and body temperature appear to be the result of heat regulation.