Ultrasonic Vocalizations Emitted by Flying Squirrels

Anecdotal reports of ultrasound use by flying squirrels have existed for decades, yet there has been little detailed analysis of their vocalizations. Here we demonstrate that two species of flying squirrel emit ultrasonic vocalizations. We recorded vocalizations from northern (Glaucomys sabrinus) and southern (G. volans) flying squirrels calling in both the laboratory and at a field site in central Ontario, Canada. We demonstrate that flying squirrels produce ultrasonic emissions through recorded bursts of broadband noise and time-frequency structured frequency modulated (FM) vocalizations, some of which were purely ultrasonic. Squirrels emitted three types of ultrasonic calls in laboratory recordings and one type in the field. The variety of signals that were recorded suggest that flying squirrels may use ultrasonic vocalizations to transfer information. Thus, vocalizations may be an important, although still poorly understood, aspect of flying squirrel social biology.     

Patterns of variation in the acoustic calling signals of Chloriona planthoppers (Homoptera: Delphacidae) coexisting on the common reed Phragmites australis

Populations of the Tour species of Chloriona commonly found in the Netherlands C dorsata, C. glaucescens, C. smaragdula and C. vasconica –were cultured in the laboratory on Phragmites australis, their exclusive host plant in the field. The low frequency substrate-transmitted signals produced during the calling phase of mating behaviour were digitally analysed for the males and females of each species. Variables selected to cover most aspects of the call were measured, and variation was quantified within species and statistically tested among species using univariate and multivariate techniques. The calls of the males were more complex in structure than those of the females, with two different phase patterns recognized, and were species-specific. C. glaucescens and C vasconica were also separated on variables of the female call, but C dorsata and C. smaragdula completely overlapped. No significant differences were found between the calls of the long-winged and.short-winged female morphs of C. smaragdula. A possible role for variation in calling signals, and responses to them, in the evolution and maintenance of reproductive isolation in Chlonona is discussed.     

Elephant calling patterns as indicators of group size and composition: the basis for an acoustic monitoring system

The paper gives evidence that the vocal activity of elephants varies with group size, composition and reproductive status, and that elephants' calling patterns could therefore provide the basis for a remote monitoring system. We examined a 3‐week set of array‐based audio recordings of savanna elephants (Loxodonta africana), searching for diagnostic acoustic parameters. An acoustic array made it possible to locate recorded sounds and attribute the calls to particular elephants or elephant groups. Simultaneous video recordings made it possible to document visible behaviour and roughly correlate it with vocalizations. We compared several measures of call density in elephant groups containing up to 59 individuals, and found that rates of calling increased with increasing numbers of elephants. We divided all call events into three structural types (single‐voice low‐frequency calls, multiple‐voice clustered low‐frequency calls, and single‐voice high frequency calls), and found that the incidence of these varies predictably with group composition. These results suggest the value of a network of listening systems in remote areas for the collection of information on elephant abundance and population structure.     

Call differences and calling site segregation in anuran species from central Amazonian floating meadows

Summary The acoustic behaviour of 15 sympatric and synchronically breeding species of frogs in an area of floating meadows near Manaus (Brazil) was studied for a period of 8 months. The calling positions of each species can be identified with certain physiognomic types of vegetation.Sound analyses were used to compare the mating calls. The main variables are dominant frequency, call duration and pulse repetition rate. Each of the 15 species has a distinct mating call and differs from the acoustic behaviour of each other one. Eleven species are separated in their dominant frequency ranges within their specific calling sites. Species sharing emphasised frequency ranges within identical calling sites differ greatly in at least two temporal variables.The roles of calling position, spectral, and temporal features of mating calls in species recognition and premating reproductive isolation are discussed.     

Long Recording Sequences: How to Track the Intra-Individual Variability of Acoustic Signals

Recently developed acoustic technologies - like automatic recording units - allow the recording of long sequences in natural environments. These devices are used for biodiversity survey but they could also help researchers to estimate global signal variability at various (individual, population, species) scales. While sexually-selected signals are expected to show a low intra-individual variability at relatively short time scale, this variability has never been estimated so far. Yet, measuring signal variability in controlled conditions should prove useful to understand sexual selection processes and should help design acoustic sampling schedules and to analyse long call recordings. We here use the overall call production of 36 male treefrogs (Hyla arborea) during one night to evaluate within-individual variability in call dominant frequency and to test the efficiency of different sampling methods at capturing such variability. Our results confirm that using low number of calls underestimates call dominant frequency variation of about 35% in the tree frog and suggest that the assessment of this variability is better by using 2 or 3 short and well-distributed records than by using samples made of consecutive calls. Hence, 3 well-distributed 2-minutes records (beginning, middle and end of the calling period) are sufficient to capture on average all the nightly variability, whereas a sample of 10 000 consecutive calls captures only 86% of it. From a biological point of view, the call dominant frequency variability observed in H. arborea (116Hz on average but up to 470 Hz of variability during the course of the night for one male) challenge about its reliability in mate quality assessment. Automatic acoustic recording units will provide long call sequences in the near future and it will be then possible to confirm such results on large samples recorded in more complex field conditions.     

Discrimination of sinusoidally frequency-modulated sound signals mimicking species-specific communication calls in the FM-bat Phyllostomus discolor

In the lesser spear-nosed bat, Phyllostomus discolor, maternal directive calls are characterized by an individual type of sinusoidal frequency modulation (= SFM) pattern. Beside modulation frequency, modulation depth, carrier frequency, and number of modulation cycles per call contribute to the mother's vocal signature. Since juvenile P. discolor learn to adapt their isolation calls to the corresponding call characteristics of the own mother or even to playback of a computer-stored directive call, if hand-reared in the absence of conspecifics, the bats' auditory system ought to be able to resolve interindividual differences in communication call structure. However, quantitative psychoacoustic data on the discrimination of SFM signals in this species are not available. Thus, in the present study, lesser spear-nosed bats were trained in a two-alternative forced-choice procedure to discriminate between two alternatingly presented SFM sound signals differing in modulation frequency. Other characteristics of acoustic stimuli were identical and designed to mimick the fundamental of species-specific calls. By gradually reducing the difference in modulation frequency between both stimuli within the behavioural relevant range until the animals' performance dropped below the 75%-correct level, a considerable auditory spectro-temporal resolution has been revealed. Particularly in comparison to the overall interindividual variation of this call parameter (minimal modulation frequency = 49 Hz, maximum = 100 Hz), the determined average difference limen for modulation frequency of 2.42 ± 0.29 Hz seems substantial and sufficient for labelling individuals. Accepted: 30 November 1996     

Acoustic Competition in Male Midwife Toads Alytes obstetricans and Alytes cisternasii: Response to Neighbor Size and Calling Rate. Implications for Female Choice

Effects of neighbor on male calling behavior was studied through playback experiments of synthetic calls to males of two species of midwife toads. The responses of resident males were scored considering two temporal parameters (call duration and calling rate) and one spectral parameter (dominant frequency). The sounds used for the playback tests included two levels of fundamental frequency (correlated with male size) and two levels of call repetition rate. In both species, resident males only changed their calling rate in the presence of an intruder, and the response was different for synthetic calls with two levels of dominant frequencies and with two calling rates. Resident size was not significantly correlated with the magnitude of the change in the calling rate. On the other hand, resident calling rate was significantly and positively correlated with the magnitude of the increase in calling rate of the stimulus. The maximum relative increase in calling rate was observed in A. cisternasii. In phonotaxis tests, females are preferentially attracted to calls emitted at a higher rate confirming the importance of changes in calling rate for female attraction.     

Maternal vocalizations of mallard ducks (Anas platyrhynchos)

While incubating, brooding and calling their young out of the nest, female mallard ducks (Anas platyrhynchos) utter a species-typical maternal vocalization that their young find highly attractive. To determine the characteristic acoustic features of these calls, we recorded the vocalizations of seven hens in the field. The pre-exodus and nest exodus calls of these hens were similar with respect to frequency modulation, presence of a low-frequency impulsive sound, note duration, and repetition rate. The exodus call differs from the pre-exodus call in having more notes per burst and more harmonics, with a corresponding upward shift in dominant frequency. Repetition rate and frequency modulation may be the critical acoustic features of the auditory basis of species identification in mallard ducklings.     

Vasotocin maintains multiple call types in the gray treefrog, Hyla versicolor.

The neuropeptide arginine vasotocin (AVT) influences vocalizations in some anuran amphibians but it is unknown whether AVT alters all vocal behaviors of a species similarly. We first characterized the vocal repertoire of male gray treefrogs (Hyla versicolor). Three different call types were distinguished by unique sets of temporal and spectral features. Second, we examined the effects of AVT on each call type by injecting frogs with either AVT (100 microg; intraperitoneal) or saline and recording subsequent behavior. In the field, AVT maintained advertisement calling, whereas calling ceased in saline-injected animals. Advertisement call rate in AVT-injected males fell significantly and dominant frequency of the call was significantly higher. In the laboratory, AVT induced advertisement calling in males that were not initially vocalizing and dominant frequency was also significantly higher in these males. AVT maintained aggressive calling similarly but the characteristics of aggressive calls were not altered by AVT. There were no significant differences in release call behavior between AVT- and saline-injected groups; however, release call duration decreased significantly in AVT-injected animals, compared with preinjection values for the same animals. The effects of AVT on vocal behavior in this species are therefore not the same for each call type. AVT may act at more general motivational levels in the central nervous system and other neural or endocrine factors may control choice of call type and direct motor output.     

Reliability and the adaptive utility of discrimination among alarm callers

Unlike individually distinctive contact calls, or calls that aid in the recognition of young by their parents, the function or functions of individually distinctive alarm calls is less obvious. We conducted three experiments to study the importance of caller reliability in explaining individual-discriminative abilities in the alarm calls of yellow-bellied marmots (Marmota flaviventris). In our first two experiments, we found that calls from less reliable individuals and calls from individuals calling from a greater simulated distance were more evocative than calls from reliable individuals or nearby callers. These results are consistent with the hypothesis that marmots assess the reliability of callers to help them decide how much time to allocate to independent vigilance. The third experiment demonstrated that the number of callers influenced responsiveness, probably because situations where more than a single caller calls, are those when there is certain to be a predator present. Taken together, the results from all three experiments demonstrate the importance of reliability in explaining individual discrimination abilities in yellow-bellied marmots. Marmots' assessment of reliability acts by influencing the time allocated to individual assessment and thus the time not allocated to other activities.     

An endangered bird calls less when invasive birds are calling

Novel noises can affect various animal behaviours, and changes to vocal behaviour are some of the most documented. The calls of invasive species are an important source of novel noise, yet their effects on native species are poorly understood. We examined the effects of invasive bird calls on the vocal activity of an endangered Australian finch to investigate whether: 1) native finch calling behaviour was affected by novel invasive bird calls, and 2) the calls of the finches overlapped in frequency with those of invasive birds. We exposed a wild population of black‐throated finch southern subspecies Poephila cincta cincta to the vocalisations of two invasive birds, nutmeg mannikins Lonchura punctulata and common mynas Acridotheres tristis, a synthetic ‘pink' noise, and a silent control. To determine whether the amount of black‐throated finch calling differed in response to treatments, we recorded and quantified black‐throated finch vocalisations, and assessed the amount of calling using a generalised linear mixed model followed by pairwise comparisons. We also measured, for both black‐throated finches and the stimulus noises: dominant, minimum and maximum frequency, and assessed the degree of frequency overlap between black‐throated finch calls and stimulus noises. Compared to silent controls, black‐throated finches called less when exposed to common myna calls and pink noise, but not to nutmeg mannikin calls. We also found that pink noise overlapped most in frequency with black‐throated finch calls. Common myna calls also somewhat overlapped the frequency range of black‐throated finch calls, whereas nutmeg mannikin calls overlapped the least. It is possible that masking interference is the mechanism behind the reduction in calling in response to common myna calls and pink noise, but more work is needed to resolve this. Regardless, these results indicate that the calls of invasive species can affect the behaviour of native species, and future research should aim to understand the scope and severity of this issue.     

The rôle of call frequency and the auditory papillae in phonotactic behavior in male Dart-poison frogs <Emphasis Type="Italic">Epipedobates femoralis</Emphasis> (Dendrobatidae)

Territorial males of the pan-Amazonian Dart-poison frog, Epipedobates femoralis, are known to present stereotypic phonotactic responses to the playback of conspecific and synthetic calls. Fixed site attachment and a long calling period within an environment of little temperature change render this terrestrial and diurnal pan-Amazonian frog a rewarding species for field bioacoustics. In experiments at the field station Aratai, French Guiana, we tested whether the prominent frequency modulation of the advertisement-call notes is critical for eliciting phonotactic responses. Substitution of the natural upward sweep by either a pure tone within the species frequency range or a reverse sweep did not alter the males' phonotactic behavior. Playbacks with artificial advertisement calls embedded in high levels of either low-pass or high-pass masking noise designed to saturate nerve fibers from either the amphibian papilla or basilar papilla showed that male phonotactic behavior in this species is subserved by activation of the basilar papilla of the inner ear.     

Calling is an honest indicator of paternal genetic quality in poison frogs

Several competing hypotheses have been put forward to explain why females of many species mate preferentially with males possessing the most conspicuous signals (e.g., ornaments, displays, or songs). We performed a laboratory experiment using two species of poison frogs, Dendrobates leucomelas and Epipedobates tricolor, to test the hypothesis that male calling performance is an honest indicator of parental quality. Our analyses are based on data from behavioral observations of mating activities of captive-reared individuals (and their offspring) that were housed in terraria for four consecutive breeding seasons. Male mating success increased with male calling rate and chirp duration in both species, suggesting that females preferred males with more elaborate calls. Because calling performance improved with age in D. leucomelas, female poison frogs that prefer males with more elaborate calls in the wild may end up mating with older males that have already proven their ability to survive. Females that mated with good callers obtained higher quality offspring. Eggs fertilized by males with high calling rates and long chirp durations had higher hatching success and produced tadpoles that were more likely to metamorphose into surviving frogs. As a consequence, females that mated with males with high calling performance obtained more surviving offspring per egg, compared to females that mated with poor callers. Collectively, our findings comply with the notion that female poison frogs prefer to mate with good callers because calling performance is a reliable predictor of offspring quality. The possible influence of maternal allocation and reasons for the strong effect size compared to previous studies are discussed.     

The challenge of small and rare species in marine biodiversity surveys: microgastropod diversity in a complex tropical coastal environment

Although molluscs feature prominently in the semi-popular and academic literature on marine biodiversity, field surveys largely ignore the small and rare species that form the majority of marine molluscan diversity. As a result of a massive effort to sample the benthic molluscs of a complex tropical coastal environment, 23,238 gastropod specimens representing 259 species of Triphoridae—a family with most adult species ranging from 2 to 10 mm—were obtained from a 45,000 hectares study area off the island of Espiritu Santo, Vanuatu. Most species are represented by fewer than 20 specimens and, despite the intensity of the sampling effort, 13% of the species are unique singletons. Spatial heterogeneity was high: out of 416 sampling events, 187 contained triphorids, and 42% of the species occurred at fewer than 5 stations. Most species were small (68% below 5 mm) or very small (22% below 3 mm). A faunal turnover was documented at around 10 m, and another at around 60 m, at the onset of the “twilight zone” that is particularly difficult to sample. On the order of 70% of the species are probably new to science. When dealing with taxonomically difficult groups a morphospecies segregation approach is operationally appropriate to detect patterns of richness, rarity and spatial turn-over. Very few, if any, conservation surveys have the human and funding resources to carry out baseline surveys of the intensity that generated the results presented here. However, as species numbers are often used to promote the conservation interest of a reef, a bay or a stretch of coast, it is essential to know how the numbers were generated: absolute numbers of species are meaningless unless sampling effort and techniques, area surveyed, and size classes targeted are described. This is very rarely the case, even in the academic literature.     

Embryonic Calls as Care-soliciting Signals in Budgerigars,Melopsittacus undulatus

Embryonic calls occur 1–3 d before hatching among precocial and some altricial birds. In precocial species, calls may synchronize hatching among siblings or, in semi-precocial species, elicit parental attention to, and often thermoregulation of, the hatching egg. Much less is known about the functional significance of calls in fully altricial species. In this study, naturalistic observations and laboratory experiments were used to document factors affecting calling and the parental responses to calls in one altricial species, the budgerigar Melopsittacus undulatus. Budgerigar chicks hatch asynchronously and vocalize 24–48 h before hatching. Embryonic calling rates increase at higher egg temperatures, and also as embryos near hatching. Parents easily locate a calling egg in their clutch, even among a large brood of much older, vocalizing nestlings. Furthermore, they actively assist in the last stages of hatching by helping to break the shell along the crack in the egg. Both observational and experimental evidence suggests that embryonic vocalizations are distinctive signals that increase parental attention and care, and may stimulate hatching assistance to a calling egg.     

Resequencing studies of nonmodel organisms using closely related reference genomes: optimal experimental designs and bioinformatics approaches for population genomics

Decreasing costs of next‐generation sequencing (NGS) experiments have made a wide range of genomic questions open for study with nonmodel organisms. However, experimental designs and analysis of NGS data from less well‐known species are challenging because of the lack of genomic resources. In this work, we investigate the performance of alternative experimental designs and bioinformatics approaches in estimating variability and neutrality tests based on the site‐frequency‐spectrum (SFS) from individual resequencing data. We pay particular attention to challenges faced in the study of nonmodel organisms, in particular the absence of a species‐specific reference genome, although phylogenetically close genomes are assumed to be available. We compare the performance of three alternative bioinformatics approaches – genotype calling, genotype–haplotype calling and direct estimation without calling genotypes. We find that relying on genotype calls provides biased estimates of population genetic statistics at low to moderate read depth (2–8×). Genotype–haplotype calling returns more accurate estimates irrespective of the divergence to the reference genome, but requires moderate depth (8–20×). Direct estimation without calling genotypes returns the most accurate estimates of variability and of most SFS tests investigated, including at low read depth (2–4×). Studies without species‐specific reference genome should thus aim for low read depth and avoid genotype calling whenever individual genotypes are not essential. Otherwise, aiming for moderate to high depth at the expense of number of individuals, and using genotype–haplotype calling, is recommended.     

Individual Variation in Advertisement Calls of Territorial Male Green Frogs, Rana clamitans: Implications for Individual Discrimination

Individuals of many territorial species discriminate between familiar territorial neighbors and unfamiliar strangers based on individual differences in acoustic signals. Many anuran amphibians are territorial and use primarily acoustic communication during social interactions, but evidence for acoustically mediated individual discrimination is available only for one species. As a first step in research designed to investigate individual discrimination in a second species of territorial frog, we examined patterns of within-male and among-male variability in 198 advertisement calls of 20 male green frogs, Rana clamitans . The aim was to determine which acoustic properties could be used by males to recognize their territorial neighbors and to estimate limits of reliability afforded by these properties for identifying different neighbors. All of the call properties that we examined exhibited significant inter-individual variation. Discriminant function analyses assigned between 52% and 100% of calls to the correct individual, depending on sample size and the call properties included in the model. This suggests that there is sufficient among-male variability to statistically identify individuals by their advertisement calls. The call properties of fundamental frequency and dominant frequency contributed the most towards discrimination among individuals. Based on their natural history and behavior and the results reported here, we suggest that male green frogs likely discriminate between strangers and adjacently territorial neighbors based on individual variation in advertisement calls.     

Long‐Distance Calling by the Willow Tit,Poecile montanus,Facilitates Formation of Mixed‐Species Foraging Flocks

The occurrence of mixed‐species foraging flocks is a worldwide phenomenon in terrestrial bird communities. Previous studies suggest that individuals participating in flocks might derive benefits in terms of improved feeding efficiency and/or reduced risk of predation. However, very little is known about how individuals establish mixed‐species flocks. Here, I provide the first experimental evidence that long‐distance calling by the willow tit, Poecile montanus, facilitates the establishment of mixed‐species flocks at a foraging patch. Observations at experimental foraging patches showed that willow tits that find a food source produce long‐distance calls, particularly when they are isolated from conspecific flockmates. The probability of long‐distance calling was negatively correlated with the number of heterospecific foraging individuals near the food source. A playback experiment confirmed that calls attract both conspecific and heterospecific members of foraging flocks. This study demonstrates that willow tits use long‐distance calls to attract conspecific flockmates to foraging patches, and these calls can also facilitate the formation of mixed‐species flocks on patches.     

Weddell seals do not lengthen calls in response to conspecific masking

Some mammalian and avian species alter their vocal communication signals to reduce masking by background noises (including conspecific calls). A preliminary study suggested that Weddell seals (Leptonychotes weddellii) increase the durations of some underwater call types when overlapped by another calling seal. The present study examined the durations and overlapping sequences of Weddell seal calls recorded in Eastern Antarctica. The calling rate, call type (13 major categories), total duration, numbers of elements per call and overlapping order of 100–200 consecutive calls per recording location were measured. In response to increased conspecific calling rates, the call durations and numbers of elements (within repeated-element call types) did not change or became shorter. Calls that were not overlapped were 3.8?±?6.1 s long, the first call in a series of overlapped calls was 14.4?±?15.7 s and subsequent calls in an overlapping series were 6.5?±?10.3 s. The mean durations of non-overlapped and overlapped calls matched random distributions. Weddell seals do not appear to be adjusting the durations or timing of their calls to purposefully avoid masking each other’s calls. The longer a call is, the more likely it is to overlap another call by chance. An implication of this is that Weddell seals may not have the behavioural flexibility to reduce masking by altering the temporal aspects of their calls or calling behaviours as background noises (natural and from shipping) increase.