The role of endophytic bacteria during seed piece decay and potato tuberization

Healthy potato tubers (Solanum tuberosum L.) cv. Kennebec were found to be internally colonized by non-pathogenic bacterial populations originating from root zone soil. These endophytic bacteria were categorized, on the basis of bioassays, as plant growth promoting (PGP), plant growth retarding (PGR) and plant growth neutral (PGN). Genera isolated from tubers included Pseudomonas, Bacillus, Xanthomonas, Agrobacterium, Actinomyces and Acinetobacter. The PGP and PGR isolates were similarly distributed throughout these genera. Bacterial populations increased in the root zone soil directly adjacent to the seed piece during and immediately following seed piece decay. Bacteria sampled at this time were capable of promoting tuber number and weight. The proportions of PGP, PGR and PGN bacteria in the root zone were altered as endophytic bacteria were released from the decaying seed piece. The study indicates that endophytic bacteria present in the seed tubers may play an important role in seed piece decay, tuberization and plant growth.     

The Role of Polyphenol Oxidase and Peroxidase in Potato Tuber Resistance to Soft Rot Caused by Erwinia carotovora

Tubers from somatic hybrids produced by protoplast fusion between Solanum brevidens, a diploid, non-tuber-bearing wild species, and a tetraploid S. tuberosum showed resistance to decay caused by soft rot Erwinia. Tubers of the S. tuberosum fusion parent and potato cultivar Russet Burbank are susceptible to bacterial soft rot. Tubers of somatic hybrids indicated higher levels of activities of polyphenol oxidase and peroxidase than tubers of the parental line of S. tuberosum and cultivar Russet Burbank. This is true for intact tubers and also for injured or inoculated tubers. Polish commercial potato cultivars indicated a higher susceptibility to soft rot than somatic hybrids. However, there were some differences in susceptibility to soft rot between Polish commercial potato cultivars, only slight differences were observed in the activities of the polyphenol oxidase and peroxidase between Polish cultivars. A relation between soft rot resistance and the activity of each enzyme was not found for intact, injured or inoculated tissue of commercial cultivars. On the contrary, the activities of both enzymes were significantly higher in the periderm than in the medullary tissue of somatic hybrids, the parental line and the commercial cultivars.     

Susceptibility of eight potato cultivars to tuber infection by Phytophthora erythroseptica and Pythium ultimum and its relationship to mefenoxam-mediated control of pink rot and leak

In addition to cultural practices, the application of the fungicide mefenoxam is an important disease management tactic used to control both pink rot and leak on potato tubers grown in the USA. Mefenoxam resistance has been identified in many of the potato growing regions, and therefore resistance management strategies are very important for retaining this fungicide as a tool to manage these storage rot diseases. The relationship between mefenoxam efficacy and cultivar susceptibility to pink rot and leak was assessed in post‐harvest inoculation studies. Mefenoxam was applied to potato (Solanum tuberosum) cultivars known to express varying levels of susceptibility to pink rot and leak caused by Phytophthora erythroseptica and Pythium ultimum, respectfully. Tubers harvested from plants treated with in‐furrow and foliar applications of mefenoxam were inoculated with isolates sensitive to the fungicide. Incidence and severity of both diseases ranged widely among cultivars. Russet Norkotah was the most susceptible to infection by P. erythroseptica, while cvs Pike and Atlantic were the most resistant. Cultivars Dark Red Norland, Russet Norkotah, Goldrush and Russet Burbank were most susceptible to infection by P. ultimum whereas Snowden was most resistant. Control of pink rot differed significantly among cultivars following mefenoxam treatment, ranging from 28% (cv. Goldrush) to 67% (cv. Snowden) and generally provided the greatest level of disease control on susceptible and moderately susceptible cultivars such as Russet Norkotah and Snowden, respectively. In contrast, the impact of mefenoxam on leak development was minimal and disease control did not differ significantly among the cultivars. The fungicide failed to control leak in the susceptible cvs Atlantic and Pike and control ranged from 1.7% to 5.2% in cvs Goldrush, Russet Norkotah, Dark Red Norland, Russet Burbank and Kennebec. The greatest level of leak control was achieved with the moderately resistant cv., Snowden, at 12.7%. Cultivars most likely to benefit from mefenoxam treatments should be targeted as part of a pink rot management programme. Judicious use of the fungicide, when matched with the level of cultivar susceptibility, may prove to be an efficient and effective approach to reduce infection rates and possibly manage mefenoxam resistance thereby maintaining longevity of the compound.     

Yield and cooking qualities of somaclonal variants of cv. Russet Burbank selected for resistance to common scab disease of potato

We previously obtained somaclonal variants of the important French fry processing cultivar Russet Burbank with significantly enhanced resistance to common scab disease. In this study we have shown the commercial merit of a proportion of these variants through comparison of relative yield and tuber quality with the parent cultivar Russet Burbank. Whilst we showed a weak negative correlation between tuber yield (as assessed by weight of tubers per plant) and relative disease resistance within selected variants, we identified several with equivalent yields to the parent cultivar. Furthermore, two disease-resistant variants (TC-RB8 and NZ-24B) consistently yielded more tuber mass than the parent. The majority of our Russet Burbank variants showed equivalent tuber quality characteristics (occurrence of defects, tuber specific gravity and dry matter content, and flesh colour) and cooking qualities (fry colour and presence of dark end defects) to the parent cultivar. Independent testing by a commercial French fry processor confirmed these quality characteristics. We present data demonstrating that highly common scab disease-resistant somaclonal variants of Russet Burbank have commercially acceptable tuber yield and quality characteristics, comparable to the industry standard and parent Russet Burbank cultivar. We also demonstrate the value of in vitro cell selection techniques for potato cultivar improvement.     

The potential benefits from cultivar specific red clover -potato crop rotations

The aim of this study was to determine if endophytic bacteria could contribute to cultivar specific interactions between red clover (Trifolium pratense L.) and potatoes (Solanum tuberosum L.) in crop rotations. Endophytic bacteria were isolated from the roots of four red clover cultivars (AC Charlie, Altaswede, Marino and Tempus) grown in the field. Populations of bacteria from each cultivar were similar. The most abundant genus was Rhizobium, but species of Curtobacterium, Pseudomonas, and Xanthomonas were common to all cultivars. Plantlets of two potato cultivars, Russet Burbank and Shepody, were inoculated individually with the seven bacterial isolates most frequently recovered from each red clover cultivar, and grown in Magenta vessels for 6 wk. Significant differences were found for plant height, and wet weights of roots, shoots and their total. Potato cultivars differed for root wet weight only, while red clover cultivar, as a source of bacteria, had a significant effect on all traits except plant height. Differences among bacteria were significant for all traits except shoot wet weight. There was a significant interaction of potato cultivar by red clover cultivar. The potato cultivar Russet Burbank did best with bacteria from the red clover cultivar, Marino; and Shepody, with bacteria from Altaswede.     

Somaclonal variation in tuber disc-derived populations of potato. II. Differential effect of genotype

Three somaclonal populations of potato (Solanum tuberosum L.), each comprised of at least 1,000 plants, were regenerated from the cultivars Kennebec, Russet Burbank, and Superior. The frequency of formation of adventitious meristems from tuber disc explants varied significantly between these potato genotypes. Only 1.0–1.3% of each somaclonal population exhibited morphological aberrations. Regenerated populations of Kennebec and Superior, when compared to respective control populations over three asexual generations, were similarly enriched with somaclones having more elongated tubers, a higher total tuber number and weight, a higher cull tuber number and weight, and earlier maturity. Somaclones of Russet Burbank also produced more elongated tubers, a higher total tuber number, and a higher cull tuber number and weight but, in contrast, these somaclones were lower in total tuber weight, lower in U.S. 1 tuber number and weight, shorter in stem length, and lower in vigor. Of the three cultivars, Russet Burbank somaclones possessed the greatest variability for most traits. Besides this significant genotype effect, quantitative traits differed amongst each other in respect of relative changes resulting from somaclonal variation. Observed differences among genotypes and quantitative traits will undoubtedly affect the success or failure of plant improvement programs attempting to utilize somaclonal variation.Research supported by a grant from NPI, 417 Wakara Way, Salt Lake City, UT 84108, USA     

Characterization of Pratylenchus penetrans from Ten Geographically Isolated Populations Based on Their Reaction on Potato

Single female cuhures of Pratylenchus penetrans were established from soil and root samples collected from 10 geographically isolated locations in North America. The resultant isolates were used to evaluate nematode egression from and multiplication on roots of potato clones to distinguish intraspecific differences among isolates. The 10 nematode isolates were statistically separated into four groups based on percentage of nematodes that egressed from the P. penetrans-resistant potato done L 118-2. The Cornell (CR), Wisconsin (WI), Long Island (LI), and Adirondack (AD) isolates, selected as representative isolates of each of the four groups, exhibited 53%, 39%, 25%, and 10% egression from L118-2, respectively. Reproduction of these four isolates was measured on three potato cultivars (Russet Burbank, Butte, and Hudson) and two breeding lines (NY85 and L118-2). The LI and AD isolates reproduced well on all five potato clones. The CR isolate reproduced well on Russet Burbank and NY85 but significantly less on Butte, Hudson, and L118-2. Reproduction of the WI isolate was less than the LI and AD isolates but more than the CR isolate on all potato clones tested except Russet Burbank. Reproduction of the WI isolate on Russet Burbank was less than the other three isolates. Based on these results, four distinct intraspecific variants of P. penetrans are proposed: Cornell, Wisconsin, Long Island, and Adirondack.     

Microbial populations,fungal species diversity and plant pathogen levels in field plots of potato plants expressing theBacillus thuringiensis var.tenebrionis endotoxin

The environmental release of genetically engineered (transgenic) plants may be accompanied by ecological effects including changes in the plant-associated microflora. A field release of transgnic potato plants that produce the insecticidal endotoxin ofBacillus thuringiensis var.tenebrionis (Btt) was monitored for changes in total bacterial and fungal populations, fungal species diversity and abundance, and plant pathogen levels. The microflora on three phenological stages of leaves (green, yellow and brown) were compared over the growing season (sample days 0, 21, 42, 63 and 98) for transgenic potato plants, commercial Russet Burbank potato plants treated with systemic insecticide (Di-Syston) and commercial Russet Burbank potato plants treated with microbialBtt (M-Trak). In addition, plant and soil assays were performed to assess disease incidence ofFusarium spp.,Pythium spp.,Verticillium dahliae, potato leaf roll virus (PLRV) and potato virus Y (PVY). Few significant differences in phylloplane microflora among the plant types were observed and none of the differences were persisent. Total bacterial populations on brown leaves on sample day 21 and on green leaves on sample day 42 were significantly higher on the transgenic potato plants. Total fungal populations on gree leaves on sample day 63 were significantly different among the three plant types; lowest levels were on the commerical potato plants treated with systemic insecticide and highest levels were on the commercial potato plants treated with microbialBtt. Differences in fungal species assemblages and diversity were correlated with sampling dates, but relatively consistent among treatments.Alternaria alternata, a common saprophyte on leaves and in soil and leaf litter, was the most commonly isolated fungus species for all the plant treatments. Rhizosphere populations of the soilborne pathogensPythium spp.,Fusarium spp. andV. dahliae did not differ between the transgenic potato plants and the commercial potato plants treated with systemic insecticide. The incidence of tuber infection at the end of the growing season by the plant pathogenV. dahliae was highest for the transgenic potato plants but this difference was related to longer viability of the transgenic potato plants. This difference in longevity between the transgenic potato plants and the commercial + systemic insecticide potato plants also made comparison of the incidence of PVY and PLRV problematic. Our results indicate that under field conditions the microflora of transgenicBtt-producing potato plants differed minimally from that of chemically and microbially treated commerical potato plants.     

Reaction of Six Solanum tuberosum Cultivars to Pratylenchus penetrans

Six potato cultivars - Superior, Yukon Gold, Monona, Norchip, Kennebec, and Russet Burbank - were grown in Tioga loamy sand in tile microplots noninfested or infested with 9,800-11,500 P. penetrans/kg soil. At midseason, soil nematode population densities on Superior potatoes were 39,800/kg compared with 17,500-25,800/kg on the other cultivars. At harvest, 118 or 139 days after planting depending on maturity date, the final soil P. penetrans population density was 24,400/kg with Superior and 34,100-51,500/kg with the other cultivars. No differences occurred in the rate of nematode build-up in soil on the six potato cultivars. The nematode suppressed yield of marketable tubers of Superior by 73% and of Yukon Gold by 25%. Losses for Russet Burbank (61%), Kennebec (55%), Monona (46%), and Norchip (43%) were intermediate.     

Simultaneous detection of major blackleg and soft rot bacterial pathogens in potato by multiplex polymerase chain reaction

A multiplex polymerase chain reaction (PCR) assay for simultaneous, fast and reliable detection of the main soft rot and blackleg potato pathogens in Europe has been developed. It utilises three pairs of primers and enables detection of three groups of pectinolytic bacteria frequently found in potato, namely: Pectobacterium atrosepticum, Pectobacterium carotovorum subsp. carotovorum together with Pectobacterium wasabiae and Dickeya spp. in a multiplex PCR assay. In studies with axenic cultures of bacteria, the multiplex assay was specific as it gave positive results only with strains of the target species and negative results with 18 non‐target species of bacteria that can possibly coexist with pectinolytic bacteria in a potato ecosystem. The developed assay could detect as little as 0.01 ng µL^–1 of Dickeya sp. genomic DNA, and down to 0.1 ng µL^–1 of P. atrosepticum and P. carotovorum subsp. carotovorum genomic DNA in vitro. In the presence of competitor genomic DNA, isolated from Pseudomonas fluorescens cells, the sensitivity of the multiplex PCR decreased tenfold for P. atrosepticum and Dickeya sp., while no change was observed for P. carotovorum subsp. carotovorum and P. wasabiae. In spiked potato haulm and tuber samples, the threshold level for target bacteria was 10¹ cfu mL^–1 plant extract (10² cfu g^–1 plant tissue), 10² cfu mL^–1 plant extract (10³ cfu g^–1 plant tissue), 10³ cfu mL^–1 plant extract (10⁴ cfu g^–1 plant tissue), for Dickeya spp., P. atrosepticum and P. carotovorum subsp. carotovorum/P. wasabiae, respectively. Most of all, this assay allowed reliable detection and identification of soft rot and blackleg pathogens in naturally infected symptomatic and asymptomatic potato stem and progeny tuber samples collected from potato fields all over Poland.     

Relative Susceptibility of Selected Cultivars,of Potato to Pratylenchus penetrans

Pratylenchus penetrans suppressed the tuber yields of potato cultivars ''Katahdin'', ''Kennebec'', and ''Superior'', but did not affect yields of ''Russet Burbank''. In comparison with noninfested controls, all initial nematode densities (P_i) of P. penetrans (P_i = 38, 81, 164, 211/ 100 cm³ of soil) suppressed yields of Superior; a moderate P_i (81/100 cm³ soil) suppressed yields of Kennebec; and on Katahdin, a moderate P_i enhanced yields, but higher P_i''s caused a marked loss. In general, yields were related to the tolerance of the cultivars to nematode colonization. Highest nematode densities were found in the roots of Russet Burbank; the next highest, in succeeding order, were found in roots of Kennebec, Katahdin, and Superior. Symptoms of nematode invasion were confined to losses of tuber yield and root weight.     

Influence of verticillium wilt resistant and susceptible potato genotypes on populations of antagonistic rhizosphere and rhizoplane bacteria and free nitrogen fixers

Summary Verticillium wilt resistant A 66 107-51 and susceptible Russet Burbank potatoes differentially influenced populations of rhizosphere and rhizoplane bacteria. Although differences in total bacteria between the two genotypes were not significantly different, selective differences were evident. These included increases in bacteria antagonistic in vitro toward Verticillium dahliae strain RB 5, and bacteria capable of fixing nitrogen that were more commonly associated with the wilt-resistant potato. Bacteria that were antagonistic to V. dahliae were predominantly Bacillus spp. Other antagonists were species of Pseudomonas, Gluconobacter, Flavobacterium, and Streptomyces. Nitrogen-fixing bacteria were Azotobacter and Azomonas spp. The suppression of Verticillium wilt in Russet Burbank during the growing season following the planting of A 66 107-51 may, in part, be explained by the above findings.     

Genetically improved potatoes: protection from damage by Colorado potato beetles

Russet Burbank potato plants have been genetically improved to resist insect attack and damage by Colorado potato beetles (Leptinotarsa decemlineata (Say)) by the insertion of a cryIIIA gene encoding the insect control protein of Bacillus thuringiensis var. tenebrionis. A modified gene that dramatically improved plant expression of this protein was utilized. Its expression in Russet Burbank potato plants resulted in protection from damage by all insect stages in the laboratory and in dramatic levels of protection at multiple field locations. Analysis of these genetically modified potatoes indicated that they conform to the standards for Russet Burbank potatoes in terms of agronomic and quality characteristics including taste.     

同一生境下白及与黄花白及内生菌群差异的初步研究

为揭示白及与黄花白及内生菌群落特征异同的内在机制,该文运用末端限制性酶切片段长度多态性分析技术对白及和黄花白及叶、茎、块茎、根等组织中内生细菌16S rDNA、内生真菌ITS区进行检测,分析内生菌丰度及多样性指数,运用主成分分析、聚类分析和相关性分析对比白及与黄花白及内生菌差异.结果表明:(1)白及和黄花白及各组织内生...     

Effect of Pot Size and Timing of Plant Growth Regulator Treatments on Growth and Tuber Yield in Greenhouse-Grown Norland and Russet Burbank Potatoes

The effects of pot size, timing of the application of paclobutrazol (PTZ) and gibberellic acid (GA₃), and the counteractive effect of these two compounds on growth and tuber yield of greenhouse-grown Norland and Russet Burbank potatoes were investigated. Plants were grown either in 1.5-liter pots (15 cm deep) or 3.0-liter pots (18 cm deep) and received a foliar application of either 1.5 mm PTZ or 9 × 10⁻³ mm GA₃ at early or late stolon initiation. Some plants that had been foliar treated with 1.5 mm PTZ at early stolon initiation were foliar treated with 9 × 10⁻³ mm GA₃ at late stolon initiation. PTZ reduced haulm length in both cultivars significantly, particularly when the treatment was applied at early stolon initiation, but the late treatment reduced haulm length only when growing in 3.0-liter pots. Irrespective of the timing of treatment, GA₃ increased haulm length in Norland growing in both pot sizes, but the treatment increased haulm length in Russet Burbank only when applied at late stolon initiation. GA₃ applied after PTZ did not overcome the growth-inhibiting effect of the PTZ treatment. The PTZ treatment effectively increased usable tuber number/plant (UTN) in Norland, but PTZ had no effect on UTN in Russet Burbank. PTZ reduced usable tuber weight/plant (UTW) only in Norland growing in 1.5-liter pots. By contrast, GA₃ increased UTN only when treated at late stolon initiation of 1.5-liter pot-grown Norland, whereas the same treatment was effective when applied only at early stolon initiation for Russet Burbank. For Norland, the increase in UTN by early applied PTZ was reduced by the subsequent application of GA₃. The use of 3.0-liter pots for minituber production in both Norland and Russet Burbank appears to have no advantage over growing in 1.5-liter pots, particularly when PTZ or GA₃ is used to enhance tuberization. Received May 30, 1997; accepted February 3, 1998     

Microbial population dynamics on Golden Delicious apples from bud to harvest and effect of fungicide applications

The microbial population dynamics on apples cv. Golden Delicious were analysed every 15 days between bud and harvest in a fully replicated experiment in northern Spain in 1994 and 1995. The total microbial populations varied with developmental stage, and with prevailing climatic conditions. The predominant mycroflora were the filamentous fungi Cladosporium and Alternaria spp. and white and pink yeasts. Other genera isolated included mainly species of Epicoccum, Fusarium and Acremonium. However, the most important post-harvest pathogens Penicillium expansum and Botrytis cinerea were seldom isolated from ripening apples. Maximum total filamentous fungal populations occurred after fruit set and during early ripening [2 × 10⁴cfu (colony-forming units) g^-1 approximately] while those of bacteria were maximum at bud stage (3.5 × 10⁵and 3.0 × 10⁴ cfu g^-1 in 1994 and 1995 respectively). White yeasts were more numerous than pink yeasts. Endophytic infection of apple buds by Alternaria spp., responsible for core rot, was found in almost all bud tissue. By contrast, Cladosporium spp. were initially isolated later from 12.5–50% of tissue samples during blooming and fruit set. The impact of a four-spray fungicide regime during apple development significantly decreased the total filamentous fungal populations in both years, and that of Cladosporium spp. in 1994. However, bacterial populations were often higher on apples from fungicide-treated plots. Fungicide sprays decreased populations of Cladosporium, Alternaria and white yeasts for a maximum of up to 15–30 days after application. Fungicide application had little effect on endophytic infection of apples by Alternaria spp. between bud and harvest.     

Effect of Burkholderia (Pseudomonas) cepacia and soil type on the control of crown rot in wheat

A rifampicin-resistant isolate of Burkholderia (Pseudomonas) cepacia (A3R) reduced crown rot (Fusarium graminearum Group 1) symptoms significantly (P 0.05) in wheat in glasshouse and field experiments and increased grain yield significantly (P 0.05) in one of two field experiments. In glasshouse experiments, applying the bacteria as a soil drench (2.5 × 109 cfu/g soil) was more effective than coating the bacteria on wheat seed (3.4 × 107cfu/seed). In field experiments, the bacteria were applied as a soil drench at the rate of 1.8 x 10¹⁰ cfu/m row. In both the glasshouse and the field, disease severity in the bacteria-inoculated treatments was significantly less in a silt loam than in a sandy loam. The silt loam had a large proportion of fine clay and silt particles (51.7%), which may have favoured the biocontrol activity and survival of the introduced B. cepacia. In a glasshouse experiment, control by B. cepacia was significantly greater in the silt loam than in the sandy loam, which in turn was greater than in a loamy sand. The loamy sand appeared to favour crown rot development but not the activity or survival of the bacterial antagonist. The latter was reflected by the relative populations of the rifampicin-resistant bacteria re-isolated from the various soils during a 5-week period after application of the bacteria (silt loam > sandy loam > loamy sand). This study further confirms that soil type can influence the populations and the level of biocontrol activity of some bacterial antagonists.     

Population dynamics of Erwinia carotovora subsp. atroseptica on the surface of intact and wounded seed potatoes during storage

Population dynamics of Erwinia carotovora subsp. atroseptica (Eca) on the tuber surface during storage (2–4°C) and pregermination, were studied by plating extracts of 6 mm² point samples on crystal violet pectate medium. To investigate the effect of harvest damage on Eca survival, intact, skinned (epidermis removed), and peeled (complete peel removed) tubers from a dry (pF 3.4) and from a wet (pF 2.0) soil were inoculated either immediately after harvesting or after air drying for 4 h. Eca numbers on intact tuber surface decreased rapidly after inoculation, whereas at the skinned and peeled surface numbers were significantly increased 2 d after harvest. Tubers peeled and inoculated with Eca were rotted by 2 d after harvest while tubers peeled and dried before inoculation did not rot; however, populations were significantly increased 2 d after harvest. For all treatments Eca numbers per point sample decreased to below detection limits 180 d after harvest. Examination of 600 mm² surface samples of the various treatments 222 d after harvest showed that Eca populations were still present. The number of tubers contaminated with colony-forming units (cfu) of Eca was significantly lower for intact surface inoculated tubers from dry soil than for those of the other treatments. Drying for 4 h before inoculation resulted in a significant reduction of the number of Eca cfu positive tubers compared to all other treatments. The ELISA OD values of the 600 mm² surface samples at day 222 were almost all positive and showed only a slight difference between the average of the tubers containing culturable Eca cells and those without culturable Eca cells.     

Carbohydrate and Ethane Release with <Emphasis Type="Italic">Erwinia carotovora</Emphasis> Subspecies <Emphasis Type="Italic">betavasculorum</Emphasis><Emphasis Type="Italic">–</Emphasis>Induced Necrosis

Erwinia carotovora subspecies betavasculorum, also known as E. betavasculorum and Pectobacterium betavasculorum, is a soil bacterium that has the capacity to cause root rot necrosis of sugarbeets. The qualitatively different pathogenicity exhibited by the virulent E. carotovora strain and two avirulent strains, a Citrobacter sp. and an Enterobacter cloacae, was examined using digital analysis of photographic evidence of necrosis as well as for carbohydrate, ethane, and ethylene release compared with uninoculated potato tuber slices. Visual scoring of necrosis was superior to digital analysis of photographs. The release of carbohydrates and ethane from potato tuber slices inoculated with the soft rot necrosis-causing Erwinia was significantly greater than that of potato tuber slices that had not been inoculated or that had been inoculated with the nonpathogenic E. cloacae and Citrobacter sp. strains. Interestingly, ethylene production from potato slices left uninoculated or inoculated with the nonpathogenic Citrobacter strain was 5- to 10-fold higher than with potato slices inoculated with the pathogenic Erwinia strain. These findings suggest that (1) carbohydrate release might be a useful measure of the degree of pathogenesis, or relative virulence; and that (2) bacterial suppression of ethylene formation may be a critical step in root rot disease formation.     

不同栽培方式的铁皮石斛根、茎中内生细菌多样性及其抑菌活性研究

【目的】分析树干仿生栽培和大棚种植的铁皮石斛根、茎中内生细菌的组成与分布,并挖掘潜在的微生物资源及功能。【方法】利用Illumina MiSeq高通量测序技术,对不同栽培方式铁皮石斛根、茎中免培养内生细菌丰富度及多样性进行比较分析;通过传统的内生菌分离法以及16S rRNA基因测序技术对可培养内生细菌进行分离鉴定;采用滤纸片法筛选拮抗石斛病原菌的内生菌株。【结果】高通量测序分析中内生细菌以Pseudomonas(30.52%)为主,其次是Mycobacterium(10.22%)以及Brachybacterium(8.32%),树干仿生栽培石斛内生细菌组成丰富度及多样性高于大棚种植,石斛根中内生细菌组成丰富度及多样性高于石斛茎。可培养内生细菌中Bacillus(18.37%)所占比例最高,其次是Curtobacterium (8.16%),同时筛选得到8株具有抑制石斛病原菌活性的菌株。【结论】铁皮石斛中蕴含着丰富的内生细菌资源,菌群组成和分布受其不同栽培方式和组织部位的影响。此外,筛选得到8株具有抑制病原菌活性的菌株,表明铁皮石斛内生细菌代谢产物具有抗菌活性。本试验对铁皮石斛内生细菌多...