Winter and summer nitrous oxide and nitrogen oxides fluxes from a seasonally snow-covered subalpine meadow at Niwot Ridge,Colorado

The soil emission rates (fluxes) of nitrous oxide (N₂O) and nitrogen oxides (NO + NO₂ = NO _x ) through a seasonal snowpack were determined by a flux gradient method from near-continuous 2-year measurements using an automated system for sampling interstitial air at various heights within the snowpack from a subalpine site at Niwot Ridge, Colorado. The winter seasonal-averaged N₂O fluxes of 0.047–0.069 nmol m⁻² s⁻¹ were ~15 times higher than observed NO _x fluxes of 0.0030–0.0067 nmol m⁻² s⁻¹. During spring N₂O emissions first peaked and then dropped sharply as the soil water content increased from the release of snowpack meltwater, while other gases, including NO _x and CO₂ did not show this behavior. To compare and contrast the winter fluxes with snow-free conditions, N₂O fluxes were also measured at the same site in the summers of 2006 and 2007 using a closed soil chamber method. Summer N₂O fluxes followed a decreasing trend during the dry-out period after snowmelt, interrupted by higher values related to precipitation events. These peaks were up to 2–3 times higher than the background summer levels. The integrated N₂O-N loss over the summer period was calculated to be 1.1–2.4 kg N ha⁻¹, compared to ~0.24–0.34 kg N ha⁻¹ for the winter season. These wintertime N₂O fluxes from subniveal soil are generally higher than the few previously published data. These results are of the same order of magnitude as data from more productive ecosystems such as fertilized grasslands and high-N-cycling forests, most likely because of a combination of the relatively well-developed soils and the fact that subnivean biogeochemical processes are promoted by the deep, insulating snowpack. Hence, microbially mediated oxidized nitrogen emissions occurring during the winter can be a significant part of the N-cycle in seasonally snow-covered subalpine ecosystems.     

Process-level controls on CO<Subscript>2</Subscript> fluxes from a seasonally snow-covered subalpine meadow soil,Niwot Ridge,Colorado

Fluxes of CO₂ during the snow-covered season contribute to annual carbon budgets, but our understanding of the mechanisms controlling the seasonal pattern and magnitude of carbon emissions in seasonally snow-covered areas is still developing. In a subalpine meadow on Niwot Ridge, Colorado, soil CO₂ fluxes were quantified with the gradient method through the snowpack in winter 2006 and 2007 and with chamber measurements during summer 2007. The CO₂ fluxes of 0.71 μmol m⁻² s⁻¹ in 2006 and 0.86 μmol m⁻² s⁻¹ in 2007 are among the highest reported for snow-covered ecosystems in the literature. These fluxes resulted in 156 and 189 g C m⁻² emitted over the winter, ~30% of the annual soil CO₂ efflux at this site. In general, the CO₂ flux increased during the winter as soil moisture increased. A conceptual model was developed with distinct snow cover zones to describe this as well as the three other reported temporal patterns in CO₂ flux from seasonally snow-covered soils. As snow depth and duration increase, the factor controlling the CO₂ flux shifts from freeze–thaw cycles (zone I) to soil temperature (zone II) to soil moisture (zone III) to carbon availability (zone IV). The temporal pattern in CO₂ flux in each zone changes from periodic pulses of CO₂ during thaw events (zone I), to CO₂ fluxes reaching a minimum when soil temperatures are lowest in mid-winter (zone II), to CO₂ fluxes increasing gradually as soil moisture increases (zone III), to CO₂ fluxes decreasing as available carbon is consumed. This model predicts that interannual variability in snow cover or directional shifts in climate may result in dramatically different seasonal patterns of CO₂ flux from seasonally snow-covered soils.     

Leaf nitrogen dioxide uptake coupling apoplastic chemistry, carbon/sulfur assimilation, and plant nitrogen status

Emission and plant uptake of atmospheric nitrogen oxides (NO + NO₂) significantly influence regional climate change by regulating the oxidative chemistry of the lower atmosphere, species composition and the recycling of carbon and nutrients, etc. Plant uptake of nitrogen dioxide (NO₂) is concentration-dependent and species-specific, and covaries with environmental factors. An important factor determining NO₂ influx into leaves is the replenishment of the substomatal cavity. The apoplastic chemistry of the substomatal cavity plays crucial roles in NO₂ deposition rates and the tolerance to NO₂, involving the reactions between NO₂ and apoplastic antioxidants, NO₂-responsive germin-like proteins, apoplastic acidification, and nitrite-dependent NO synthesis, etc. Moreover, leaf apoplast is a favorable site for the colonization by microbes, which disturbs nitrogen metabolism of host plants. For most plant species, NO₂ assimilation in a leaf primarily depends on the nitrate (NO₃ ⁻) assimilation pathway. NO₂–N assimilation is coupled with carbon and sulfur (sulfate and SO₂) assimilation as indicated by the mutual needs for metabolic intermediates (or metabolites) and the NO₂-caused changes of key metabolic enzymes such as phosphoenolpyruvate carboxylase (PEPc) and adenosine 5′-phosphosulfate sulfotransferase, organic acids, and photorespiration. Moreover, arbuscular mycorrhizal (AM) colonization improves the tolerance of host plants to NO₂ by enhancing the efficiency of nutrient absorption and translocation and influencing foliar chemistry. Further progress is proposed to gain a better understanding of the coordination between NO₂–N, S and C assimilation, especially the investigation of metabolic checkpoints, and the effects of photorespiratory nitrogen cycle, diverse PEPc and the metabolites such as cysteine, O-acetylserine (OAS) and glutathione.     

Release and uptake of volatile inorganic and organic gases through the snowpack at Niwot Ridge,Colorado

Whole air drawn from four heights within the high elevation (3,340 m asl), deep, winter snowpack at Niwot Ridge, Colorado, were sampled into stainless steel canisters, and subsequently analyzed by gas chromatography for 51 volatile inorganic and organic gases. Two adjacent plots with similar snow cover were sampled, one over bare soil and a second one from within a snow-filled chamber where Tedlar/Teflon-film covered the ground and isolated it from the soil. This comparison allowed for studying effects from processes in the snowpack itself versus soil influences on the gas concentrations and fluxes within and through the snowpack. Samples were also collected from ambient air above the snow surface for comparison with the snowpack air. Analyzed gas species were found to exhibit three different kinds of behavior: (1) One group of gases, i.e., carbon dioxide (CO₂), chloroform (CHCl₃), dimethylsulfide (CH₃)₂S, carbondisulfide (CS₂), and dichlorobromomethane (CHBrCl₂), displayed higher concentrations inside the snow, indicating a formation of these species and release into the atmosphere. (2) A second group of compounds, including carbon monoxide (CO), carbonyl sulfide (COS), the hydrocarbons methane, ethane, ethyne, benzene, and the halogenated compounds methylchloride (CH₃Cl), methylbromide (CH₃Br), dibromomethane (CH₂Br₂), bromoform (CHBr₃), tetrachloromethane (CCl₄), CFC-11, CFC-12, HCFC-22, CFC-113, 1,2-dichloroethane, methylchloroform, HCFC-141b, and HCFC-142b, were found at lower concentrations in the snow, indicating that the snow and/or soil constitute a sink for these gases. (3) For 21 other gases absolute concentrations, respectively concentration gradients, were too low to unequivocally identify their uptake or release behavior. For gases listed in the first two groups, concentration gradients were incorporated into a snowpack gas diffusion model to derive preliminary estimates of fluxes at the snow-atmosphere interface. The snowpack gradient flux technique was found to offer a highly sensitive method for the study of these surface gas exchanges. Microbial activities below this deep, winter snowpack appear to be the driving mechanism behind these gas sources and sinks. Flux results were applied to a simple box model to assess the potential contribution of the snowpack uptake rates to atmospheric lifetimes of these species.     

Storage and release of solutes from a subalpine seasonal snowpack: soil and stream water response, Niwot Ridge, Colorado

Much of the research on the chemistry of snow and surface waters of the western US, Europe, and Asia has been conducted in high-elevation catchments above treeline. Here we provide information on the solute content of the seasonal snowpack at the Soddie site on Niwot Ridge, Colorado, a subalpine site near treeline. We focus on the storage and release of both inorganic and organic solutes to the soils underneath the snowpack, and subsequent effects on the chemical and nutrient content of the underlying soil solution and the adjacent headwater stream. The concentration of inorganic nitrogen (N) stored in the seasonal snowpack at the Soddie site of about 11 μeq L⁻¹ was on the upper end of values reported for the northern hemisphere when compared to most areas of the Alps, Himalayas, and Tien Shan mountain ranges, but consistent with other reports of snowpacks in the Rocky Mountains. The storage of inorganic N in the snowpack at maximum accumulation averaged about 17 meq m⁻², or 170 eq ha⁻¹ (on the order of 2 kg-N ha⁻¹). Solutes were released from storage in the form of an ionic pulse, with a maximum concentration factor of about four. In contrast to the seasonal snowpack, the dominant form of N in the soil solution was dissolved organic N. Thus, soils underlying the seasonal snowpack appear to assimilate inorganic N released from storage in the snowpack and convert it to organic N. A two component mixing model suggests that the majority of streamflow was this year’s snowmelt that had infiltrated the subsurface and undergone subsequent biological and geochemical reactions. The inorganic N in surface waters at the headwaters of Como creek were always near or below detection limits, suggesting that this area at treeline is still N-limited.     

Winter production of CO2 and N2O from alpine tundra: environmental controls and relationship to inter-system C and N fluxes

Fluxes of CO₂ and N₂O were measured from both natural and experimentally augmented snowpacks during the winters of 1993 and 1994 on Niwot Ridge in the Colorado Front Range. Consistent snow cover insulated the soil surface from extreme air temperatures and allowed heterotrophic activity to continue through much of the winter. In contrast, soil remained frozen at sites with inconsistent snow cover and production did not begin until snowmelt. Fluxes were measured when soil temperatures under the snow ranged from –5°C to 0°C, but there was no significant relationship between flux for either gas and temperature within this range. While early developing snowpacks resulted in warmer minimum soil temperatures allowing production to continue for most of the winter, the highest CO₂ fluxes were recorded at sites which experienced a hard freeze before a consistent snowpack developed. Consequently, the seasonal flux of CO₂ –C from snow covered soils was related both to the severity of freeze and the duration of snow cover. Over-winter CO₂ –C loss ranged from 0.3 g C m⁻² season⁻¹ at sites characterized by inconsistent snow cover to 25.7 g C m⁻² season⁻¹ at sites that experienced a hard freeze followed by an extended period of snow cover. In contrast to the pattern observed with C loss, a hard freeze early in the winter did not result in greater N₂O–N loss. Both mean daily N₂O fluxes and the total over-winter N₂O–N loss were related to the length of time soils were covered by a consistent snowpack. Over-winter N₂O–N loss ranged from less 0.23 mg N m⁻² from the latest developing, short duration snowpacks to 16.90 mg N m⁻² from sites with early snow cover. These data suggest that over-winter heterotrophic activity in snow-covered soil has the potential to mineralize from less than 1% to greater than 25% of the carbon fixed in ANPP, while over-winter N₂O fluxes range from less than half to an order of magnitude higher than growing season fluxes. The variability in these fluxes suggests that small changes in climate which affect the timing of seasonal snow cover may have a large effect on C and N cycling in these environments. Received: 5 April 1996 / Accepted: 25 November 1996     

Effect of Reduced Winter Precipitation and Increased Temperature on Watershed Solute Flux, 1988–2002, Northern Michigan

Since 1987 we have studied weekly change in winter (December–April) precipitation, snowpack, snowmelt, soil water, and stream water solute flux in a small (176-ha) Northern Michigan watershed vegetated by 65–85 year-old northern hardwoods. Our primary study objective was to quantify the effect of change in winter temperature and precipitation on watershed hydrology and solute flux. During the study winter runoff was correlated with precipitation, and forest soils beneath the snowpack remained unfrozen. Winter air temperature and soil temperature beneath the snowpack increased while precipitation and snowmelt declined. Atmospheric inputs declined for H⁺, NO₃⁻, NH₄⁺, dissolved inorganic nitrogen (DIN), and SO₄²⁻. Replicated plot-level results, which could not be directly extrapolated to the watershed scale, showed 90% of atmospheric DIN input was retained in surface shallow (<15 cm deep) soils while SO₄²⁻ flux increased 70% and dissolved organic carbon (DOC) 30-fold. Most stream water base cation (C_B), HCO₃⁻, and Cl⁻ concentrations declined with increased stream water discharge, K⁺, NO₃⁻, and SO₄²⁻ remained unchanged, and DOC and dissolved organic nitrogen (DON) increased. Winter stream water solute outputs declined or were unchanged with time except for NO₃⁻ and DOC which increased. DOC and DIN outputs were correlated with the percentage of winter runoff and stream discharge that occurred when subsurface flow at the plot-level was shallow (<25 cm beneath Oi). Study results suggest that the percentage of annual runoff occurring as shallow lateral subsurface flow may be a major factor regulating solute outputs and concentrations in snowmelt-dominated ecosystems.     

Process improvement in amino acid N-carboxyanhydride synthesis by N-carbamoyl amino acid nitrosation

Amino acid N-carboxyanhydrides (NCA), convenient monomer for polypeptide synthesis, are easily prepared in high purity as the result of N-carbamoyl amino acids (CAA) nitrosation by gaseous NOx (4:1 NO + O₂ mixture, or NOCl) in toluene. Removal of polar side products is then efficiently carried out during subsequent work-up and crystallisation so that the resulting NCA obtained in good yield is suitable for controlled, primary amine-initiated polymerisation.     

An automated system for continuous measurements of trace gas fluxes through snow: an evaluation of the gas diffusion method at a subalpine forest site,Niwot Ridge,Colorado

An experimental system for sampling trace gas fluxes through seasonal snowpack was deployed at a subalpine site near treeline at Niwot Ridge, Colorado. The sampling manifold was in place throughout the entire snow-covered season for continuous air sampling with minimal disturbance to the snowpack. A series of gases (carbon dioxide, water vapor, nitrous oxide, nitric oxide, ozone, volatile organic compounds) was determined in interstitial air withdrawn at eight heights in and above the snowpack at ~hourly intervals. In this paper, carbon dioxide data from 2007 were used for evaluation of this technique. Ancillary data recorded inlcuded snow physical properties, i.e., temperature, pressure, and density. Various vertical concentration gradients were determined from the multiple height measurements, which allowed calculation of vertical gas fluxes through the snowpack using Fick’s 1st law of diffusion. Comparison of flux results obtained from different height inlet combinations show that under most conditions fluxes derived from individual gradient intervals agree with the overall median of all data within a factor of 1.5. Winds were found to significantly influence gas concentration and gradients in the snowpack. Under the highest observed wind conditions, concentration gradients and calculated fluxes dropped to as low as 13% of non-wind conditions. Measured differential pressure amplitude exhibited a linear relationship with wind speed. This suggests that wind speed is a sound proxy for assessing advection transport in the snow. Neglecting the wind-pumping effect resulted in considerable underestimation of gas fluxes. An analysis of dependency of fluxes on wind speeds during a 3-week period in mid-winter determined that over this period actual gas fluxes were most likely 57% higher than fluxes calculated by the diffusion method, which omits the wind pumping dependency. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Biological and physical influences on the carbon isotope content of CO<Subscript>2</Subscript> in a subalpine forest snowpack,Niwot Ridge,Colorado

Considerable research has recently been devoted to understanding biogeochemical processes under winter snow cover, leading to enhanced appreciation of the importance of many winter ecological processes. In this study, a comprehensive investigation of the stable carbon isotope composition (δ¹³C) of CO₂ within a high-elevation subalpine forest snowpack was conducted. Our goals were to study the δ¹³C of biological soil respiration under snow in winter, and to assess the relative importance of diffusion and advection (ventilation by wind) for gas transport within snow. In agreement with other studies, we found evidence of an active microbial community under a roughly 1-m deep snowpack during winter and into spring as it melted. Under-snow CO₂ mole fractions were observed up to 3,500 μmol mol⁻¹, and δ¹³C of CO₂ varied from ~−22 to ~−8‰. The δ¹³C of soil respiration calculated from mixing relationships was −26 to −24‰, and although it varied in time, it was generally close to that of the bulk organic horizon (−26.0‰). Subnivean CO₂ and δ¹³C were quite dynamic in response to changes in soil temperature, liquid water availability, and wind events. No clear biologically-induced isotopic changes were observed during periods when microbial activity and root/rhizosphere activity were expected to vary, although such changes cannot be eliminated. There was clear evidence of isotopic enrichment associated with diffusive transport as predicted by theory, but simple diffusive enrichment (4.4‰) was not observed. Instead, ventilation of the snowpack by sustained wind events in the forest canopy led to changes in the diffusively-enriched gas profile. The isotopic influence of diffusion on gases in the snowpack and litter was greatest at greater depths, due to the decreased relative contribution of advection at depth. There were highly significant correlations between the apparent isotopic content of respiration from the soil with wind speed and pressure. In summary, physical factors influencing gas transport substantially modified and potentially obscured biological factors in their effects on δ¹³C of CO₂ within this subalpine forest snowpack.     

Nitric oxide and antioxidant status in glucose and oxygen deprived neonatal and adult rat brain synaptosomes

Nitric oxide (NO) has been implicated in the process of cerebral ischemia/reperfusion injury. We have examined the production of NO, as reflected by nitrite (NO₂ ⁻)+nitrate (NO₃ ⁻) accumulation, from synaptosomes isolated from neonatal or adult rat brain and subjected to a period of glucose and oxygen deprivation. There was a significant increase in the amount of NO₂ ⁻+NO₃ ⁻ production from adult synaptosomes under these conditions, whereas there was no difference compared to control in the production of NO₂ ⁻+NO₃ ⁻ from the neonatal synaptosomes. The total antioxidant status of the synaptosomes at these different stages of brain development was found to be the same. These data suggest that the vulnerability of the adult brain to ischemia/reperfusion injury may be associated with the production of NO from nerve terminals. The ratios of antioxidant capacity to NO production under such conditions have been shown here to be different between the neonatal and adult nerve terminals. Thus the well documented resistance of neonatal brain to ischemia/reperfusion injury may involve the neonatal nerve terminal being under less oxidative stress than the adult.     

Microbial activity under alpine snowpacks, Niwot Ridge, Colorado

Experiments were conducted during 1993 at Niwot Ridge in the Colorado Front Range to determine if the insulating effect of winter snow cover allows soil microbial activity to significantly affect nitrogen inputs and outputs in alpine systems. Soil surface temperatures under seasonal snowpacks warmed from –14 °C in January to 0 °C by May 4th. Snowmelt began in mid-May and the sites were snow free by mid June. Heterotrophic microbial activity in snow-covered soils, measured as C0₂ production, was first identified on March 4, 1993. Net C0₂ flux increased from 55 mg CO₂-C m^–2 day^–1 in early March to greater than 824 mg CO₂-C m-2 day^–1 by the middle of May. Carbon dioxide production decreased in late May as soils became saturated during snowmelt. Soil inorganic N concentrations increased before snowmelt, peaking between 101 and 276 mg kg^–1 soil in May, and then decreasing as soils became saturated with melt water. Net N mineralization for the period of March 3 to May 4 ranged from 2.23 to 6.63 g N m^–2, and were approximately two orders of magnitude greater than snowmelt inputs of 50.4 mg N m^–2 for NH₄ ⁺ and 97.2 mg N m^–2 for NO₃ ^–. Both NO₃ ^– and NH₄ ⁺ concentrations remained at or below detection limits in surface water during snowmelt, indicating the only export of inorganic N from the system was through gaseous losses. Nitrous oxide production under snow was first observed in early April. Production increased as soils warned, peaking at 75 g N₂O-N m^–2 day^–1 in soils saturated with melt water one week before the sites were snow free. These data suggest that microbial activity in snow-covered soils may play a key role in alpine N cycling before plants become active.     

The effect of soil freezing on N cycling: comparison of two headwater subcatchments with different vegetation and snowpack conditions in the northern Hokkaido Island of Japan

Climate change models predict that the snowpacks of temperate forests will develop later and be shallower resulting in a higher propensity for soil freezing. In the northern most island of Japan, Hokkaido, snowpack depth decreases from west to east. This snowpack depth gradient provided a unique opportunity to test the effects of variable snowpack and soil freezing on N biogeochemistry. The Shibecha Northern Catchment in Shibecha Experimental Forest, eastern Hokkaido had deciduous trees and a mean annual snowpack of 0.7 m while the M3 catchment in Uryu Experimental Forest, western Hokkaido had mixed deciduous and coniferous tree species and a mean annual snowpack of 2.0 m. We conducted a field study (October 2004–April 2005) to determine if differences in Shibecha and Uryu soil extractable N, N mineralization, and nitrification were controlled by the variability in soil freezing during winter or tree species composition that affected the quality of the forest floor. The mixed deciduous and coniferous trees forming the Uryu forest floor had a higher C:N ratio (25.0 vs. 22.4 at Shibecha), higher lignin:N ratio (15 vs. 8.8), and higher lignin concentrations (0.28 vs. 0.18 g lignin g⁻¹). These differences in forest floor quality contributed to higher net N mineralization and nitrification in Shibecha compared to Uryu. In Shibecha, soil remained frozen for the entire study. For Uryu, except for an early period with cold temperatures and no snow, the soil generally remained unfrozen. As a result of the early winter cold period and soil freezing, extractable soil NH₄⁺ did not change but NO₃⁻ increased. Reciprocal 0–5 cm mineral soil transplants made between Shibecha and Uryu and incubated during winter at 0, 5, and 30 cm suggested that soil freezing resulted in greater net N mineralization yet lower nitrification regardless of the soil origin. The effect of soil freezing should be considered when evaluating differences in N dynamics between temperate ecosystems having a propensity for soil freezing.     

Nitrogen dynamics in Lake Okeechobee: forms,functions, and changes

Total nitrogen (TN) in Lake Okeechobee, a large, shallow, turbid lake in south Florida, has averaged between 90 and 150 μM on an annual basis since 1983. No TN trends are evident, despite major storm events, droughts, and nutrient management changes in the watershed. To understand the relative stability of TN, this study evaluates nitrogen (N) dynamics at three temporal/spatial levels: (1) annual whole lake N budgets, (2) monthly in-lake water quality measurements in offshore and nearshore areas, and (3) isotope addition experiments lasting 3 days and using ¹⁵N-ammonium (¹⁵NH₄ ⁺) and ¹⁵N-nitrate (¹⁵NO₃ ⁻) at two offshore locations. Budgets indicate that the lake is a net sink for N. TN concentrations were less variable than net N loads, suggesting that in-lake processes moderate these net loads. Monthly NO₃ ⁻ concentrations were higher in the offshore area and higher in winter for both offshore and nearshore areas. Negative relationships between the percentage of samples classified as algal blooms (defined as chlorophyll a > 40 μg l⁻¹) and inorganic N concentrations suggest N-limitation. Continuous-flow experiments over intact sediment cores measured net fluxes (μmol N m⁻² h⁻¹) between 0 and 25 released from sediments for NH₄ ⁺, 0–60 removed by sediments for NO₃ ⁻, and 63–68 transformed by denitrification. Uptake rates in the water column (μmol N m⁻² h⁻¹) determined by isotope dilution experiments and normalized for water depth were 1,090–1,970 for NH₄ ⁺ and 59–119 for NO₃ ⁻. These fluxes are similar to previously reported results. Our work suggests that external N inputs are balanced in Lake Okeechobee by denitrification.     

Spatial variation in taxonomic distinctness of ciliated protozoan communities at genus-level resolution and relationships to marine water quality in Jiaozhou Bay,northern China

Taxonomic distinctness of ciliated protozoan communities at genus-level resolution was studied over a 12-month period (June 2007–May 2008) in Jiaozhou Bay, northern China. Samples were collected biweekly from three different depths at each of five sites. A range of physico-chemical parameters were also measured in order to determine water quality. Multivariate and univariate analyses showed that (1) spatial patterns of ciliated protozoan communities were significantly different among the five sampling sites (P < 0.05); (2) there were no significant differences among the three depths at each site (P > 0.05); (3) the taxonomic patterns of ciliate communities at genus-level resolution were significantly correlated with the spatial variation of environmental variables, in particular nitrate nitrogen (NO₃-N), sum of NO₃-N and nitrite nitrogen (NO _n -N), and soluble reactive phosphate (SRP); (4) the Margalef’s index did not show a significant correlation with chemical parameters although it was higher for the less eutrophic than the more eutrophic sites (P > 0.05); (5) the average taxonomic distinctness (Δ⁺) and variation in taxonomic distinctness (Λ⁺) of the ciliate communities at genus-level resolution were significantly negatively correlated with the combination of NO _n -N and SRP; (6) the paired taxonomic biodiversity indices (Δ⁺ and Λ⁺) showed a clear decreasing trend of departure from the expected taxonomic breadth in response to water quality. These results suggest that spatial patterns and taxonomic distinctness (especially the paired Δ⁺ and Λ⁺) of ciliated protozoan communities at genus-level resolution can be used as potential indicators for assessing marine water quality while minimizing costs in terms of the time and resources needed for sample analysis.     

White on green: under-snow microbial processes and trace gas fluxes through snow,Niwot Ridge,Colorado Front Range

The importance of snow and related cryospheric processes as an ecological factor has been recognized since at least the beginning of the twentieth century. Even today, however, many observations remain anecdotal. The research to date on cold-lands ecosystems results in scientists being unable to evaluate to what extent changes in the cryosphere will be characterized by abrupt changes in local and global biogeochemical cycles, and how these changes in seasonality may affect the rates and timing of key ecological processes. Studies of gas exchanges through snow have revealed that snow plays an important role in modulating wintertime soil biogeochemical processes, and that these can be the driving processes for gas exchange at the snow surface. Previous research has primarily focused on carbon dioxide, and resulted from episodic experiments at a number of snow-covered sites. Here we report new insights from several field sites on Niwot Ridge in the Colorado Rocky Mountains, including a dedicated snow gas flux research facility established at the 3340 m Soddie site. A novel in situ experimental system was developed at this site to continuously sample trace gases from above and within the snowpack for the duration of seasonal snow cover. The suite of chemical species investigated includes carbon dioxide, nitrous oxide, nitrogen oxides, ozone, and volatile inorganic and organic gases. Wintertime measurements have been supplemented by soil chamber experiments and eddy covariance measurements to allow assessment of the contribution of wintertime fluxes to annual biogeochemical budgets. This research has resulted in a plethora of new insight into the physics of gas transport through the snowpack, and the magnitude and the chemical and biogeochemical processes that control fluxes at the soil-snowpack and the snow-atmosphere interface. This article provides an overview of the history and evolution of this research, and highlights the findings from the ten articles that constitute this special issue.     

Nitrate reductase activity and nitrogen compounds in xylem exudate of Juglans nigra seedlings: relation to nitrogen source and supply

Nitrogen (N) limits plant productivity and its uptake and assimilation may be regulated by N source, N availability, and nitrate reductase activity (NRA). Knowledge of how these factors interact to affect N uptake and assimilation processes in woody angiosperms is limited. We fertilized 1-year-old, half-sib black walnut (Juglans nigra L.) seedlings with ammonium (NH₄ ⁺) [as (NH₄)₂SO₄], nitrate (NO₃ ⁻) (as NaNO₃), or a mixed N source (NH₄NO₃) at 0, 800, or 1,600 mg N plant⁻¹ season⁻¹. Two months following final fertilization, growth, in vivo NRA, plant N status, and xylem exudate N composition were assessed. Specific leaf NRA was higher in NO₃ ⁻-fed and NH₄NO₃-fed plants compared to observed responses in NH₄ ⁺-fed seedlings. Regardless of N source, N addition increased the proportion of amino acids (AA) in xylem exudate, inferring greater NRA in roots, which suggests higher energy cost to plants. Root total NRA was 37% higher in NO₃ ⁻-fed than in NH₄ ⁺-fed plants. Exogenous NO₃ ⁻ was assimilated in roots or stored, so no difference was observed in NO₃ ⁻ levels transported in xylem. Black walnut seedling growth and physiology were generally favored by the mixed N source over NO₃ ⁻ or NH₄ ⁺ alone, suggesting NH₄NO₃ is required to maximize productivity in black walnut. Our findings indicate that black walnut seedling responses to N source and level contrast markedly with results noted for woody gymnosperms or herbaceous angiosperms.     

Nitric oxide promotes in vitro organogenesis in <Emphasis Type="Italic">Linum usitatissimum</Emphasis> L.

The effects of nitric oxide (NO) on caulogenesis, shoot organogenesis and rhizogenesis from hypocotyl explants of Linum usitatissimum were investigated. Exogenously supplied NO donors, 5 μM sodium nitroprusside (SNP), 2 μM S-nitroso-N-acetylpenicillamine (SNAP) and 2 μM 3-morpholinosydnonimine (SIN-1), significantly promoted shoot differentiation from the hypocotyl explants of L. usitatissimum excised from its in vitro raised seedlings. Potassium ferrocyanide, a structural analogue of SNP, lacking NO group, did not promote shoot organogenesis. Likewise, products of NO, \textNO₂ ^- {\text{NO}}_{2}^{ - } and \textNO₃ ^- {\text{NO}}_{3}^{ - } supplied as 5 μM NaNO₂ and 5 μM NaNO₃ did not enhance shoot differentiation. Another source of NO, a mixture of sodium nitrite (SN) provided along with ascorbic acid (AsA), also caused significant promotion in the average number of shoots per responding explant. SNP also augmented the rhizogenic response of the microshoots in terms of percentage of responding explants, number of roots per responding explant and average root length. The NO scavengers, 2-(4-carboxy-phenyl)-4, 4, 5, 5-tetramethylimideazoline-1-oxyl-3-oxide (cPTIO) or methylene blue (MB), provided along with SNP, SNAP, SIN-1 or SN + AsA, at concentrations equimolar to the optimum concentration of the donors, reversed the promotory influence, thereby, confirming the role of NO in promotion of in vitro morphogenesis. However, NO scavengers individually did not affect the observed morphogenic processes. Morphological and histological studies of hypocotyl segments cultured on BM or BM + SNP for 4, 8 and 12 days demonstrated that SNP enhanced shoot differentiation by inducing a higher number of shoot primordia, each of which develops into a single shoot.     

Effects of macro elements and nitrogen source on biomass accumulation and bacoside A production from adventitious shoot cultures of <Emphasis Type="Italic">Bacopa monnieri</Emphasis> (L.)

The present work deals with optimization of adventitious shoot culture of Bacopa monnieri for the production of biomass and bacoside A and has investigated the effects of macro elements (NH₄NO_3, KNO_3, CaCl_2, MgSO₄ and KH₂PO₄) and nitrogen source [NH₄ ⁺/NO₃ ⁻] of Murashige and Skoog (Physiol Plant 15:473–497, 1962) medium (MS) on accumulation of biomass and bacoside A content. Optimum number of adventitious shoots (99.33 shoots explant⁻¹), fresh weight (1.841 g) and dry weight (0.150 g) were obtained in the medium with 2.0× strength of NH₄NO₃. The highest production of bacoside A content was also recorded in the medium of 2.0× NH₄NO₃, which produced 17.935 mg g⁻¹ DW. The number of adventitious shoot biomass and bacoside A content were optimum when the NO₃ ⁻ concentration was higher than that of NH₄ ⁺. Maximum number of shoots (70.00 shoots explant⁻¹), biomass (fresh weight 1.137 g and dry weight 0.080 g) and also bacoside A content (27.106 mg g⁻¹ DW) were obtained at NH₄ ⁺/NO₃ ⁻ ratio of 14.38/37.60 mM. Overall, MS medium supplemented with 2.0× NH₄NO₃ is recommended for most efficient bacoside A production.     

Nutrient fluxes in a snow-dominated, semi-arid forest: Spatial and temporal patterns

We tested five hypotheses regarding the potential effects of precipitation change on spatial and temporal patterns of water flux, ion flux, and ion concentration in a semiarid, snowmelt-dominated forest in Little Valley, Nevada. Variations in data collected from 1995 to 1999 were used to examine the potential effects of snowpack amount and duration on ion concentrations and fluxes. Soil solution NO₃ ^–, NH₄ ⁺, and ortho-phosphate concentrations and fluxes were uniformly low, and the variations in concentration bore no relationship to snowmelt water flux inputs of these ions. Weathering and cation exchange largely controlled the concentrations and fluxes of base cations from soils in these systems; however, soil solution base cation concentrations were affected by cation concentrations during snowmelt episodes. Soil solution Cl^– and SO₄ ^2– concentrations closely followed the patterns in snowmelt water, suggesting minimal buffering of either ion by soils. In contrast to other studies, the highest concentration and the majority of ion flux from the snowpack in Little Valley occurred in the later phases of snowmelt. Possible reasons for this include sublimation of the snowpack and dry deposition of organic matter during the later stages of snowmelt. Our comparison of interannual and spatial patterns revealed that variation in ion concentration rather than water flux is the most important driver of variation in ion flux. Thus, it is not safe to assume that changes in total precipitation amount will cause concomitant changes in ion inputs to this system.