Investigation of the First Case of Dengue Virus Infection Acquired in Western Australia in Seven Decades: Evidence of Importation of Infected Mosquitoes?

In October 2013, a locally-acquired case of dengue virus (DENV) infection was reported in Western Australia (WA) where local dengue transmission has not occurred for over 70 years. Laboratory testing confirmed recent DENV infection and the case demonstrated a clinically compatible illness. The infection was most likely acquired in the Pilbara region in the northwest of WA. Follow up investigations did not detect any other locally-acquired dengue cases or any known dengue vector species in the local region, despite intensive adult and larval mosquito surveillance, both immediately after the case was notified in October 2013 and after the start of the wet season in January 2014. The mechanism of infection with DENV in this case cannot be confirmed. However, it most likely followed a bite from a single infected mosquito vector that was transiently introduced into the Pilbara region but failed to establish a local breeding population. This case highlights the public health importance of maintaining surveillance efforts to ensure that any incursions of dengue vectors into WA are promptly identified and do not become established, particularly given the large numbers of viraemic dengue fever cases imported into WA by travellers returning from dengue-endemic regions.     

Earth's Oldest (∼ 3.5 Ga) Fossils and the `Early Eden Hypothesis': Questioning the Evidence

We question the biogenicity of putative bacterial and cyanobacterial 'microfossils' from 3465 Ma Apex cherts of the Warrawoona Group in Western Australia. They are challenged on the basis of integrated multidisciplinary evidence obtained from field and fabric mapping plus new high-resolution research into their context, sedimentology, filament morphology, 'septation' and arrangement. They cannot be distinguished from (and are reinterpreted as) secondary artefacts of amorphous carbon that formed during devitrification of successive generations of carbonaceous hydrothermal dyke vein quartz. Similar structures occur within associated carbonaceous volcanic glass. The null hypothesis of an abiotic or prebiotic origin for such ancient carbonaceous matter is sustained until mutually supporting contextural, morphological and geochemical evidence for a bacterial rather than abiotic origin is forthcoming.     

Behaviour of Dinosaurian Track-Makers in the Winton Formation (Cretaceous,Albian–Cenomanian) at Lark Quarry,Western Queensland,Australia: Running or Swimming?

A remarkable assemblage of dinosaur trackways in the Winton Formation (Albian–Cenomanian) at Lark Quarry, in western Queensland, Australia, has long been regarded as evidence of a stampede involving small theropods, whose tracks were classified in the ichnogenus Skartopus, and small ornithopods, whose tracks represented a second ichnogenus, Wintonopus. However, one recently-published study has claimed that existing interpretation of Lark Quarry is incorrect: it maintains that all the track-makers were ornithopods, that the ichnogenus Skartopus is a variant form of Wintonopus, and that most of the Lark Quarry track-makers were not running but more probably swimming downstream in a current of water. Those iconoclastic claims are investigated here and shown to be untenable. They derive from overgeneralized interpretation of the Lark Quarry track assemblage and invoke ad hoc auxiliary hypotheses which are either untestable or demonstrably incorrect. Closer inspection of the evidence underpinning those claims corroborates the existing interpretation of Lark Quarry as the site of a dinosaurian stampede and confirms the validity of the original distinction between theropod tracks (Skartopus) and ornithopod tracks (Wintonopus).     

Legacy of Land-Use Evident in Soils of Western Australia’s Wheatbelt

Native regeneration of old-fields in the wheat-growing region of Western Australia is slow to non-existent. We compared the physio-chemical properties of three old-fields and three woodland remnants adjacent to each old-field to determine if current soil conditions are a barrier to regeneration. Of the variation in soil properties, 17.4% was described by spatial structure, 5.4% by land use (cultivation time and time since abandonment), 3.9% by soil type and 2.6% by vegetation and leaf litter cover. There were differences in individual soil properties between old-field and remnant soils at two sites. Soil compaction, probable erosion as evident by a higher percentage of coarse fragments, increased Colwell phosphate that we interpret as fertiliser residue and reduced organic carbon were evident in one old field, after 60 years of cultivation and 14 years abandonment. Increased Colwell phosphate was evident at the second old field, despite only 1 year in cultivation and 45 years in recovery. The third site showed no evidence of its 4 year period in cultivation 43 years ago despite similar farming practices and soil type to the second. Phosphate fertiliser residues could account for the dominance of non-native annual grasses in the re-assembly of wheatbelt old-fields.     

Biomarkers of exposure in fish inhabiting the Swan–Canning Estuary, Western Australia – a preliminary study

The estuarine portion of the Swan–Canning riversystem runs through the centre of Perth,Western Australia's capital city, with apopulation of approximately 1.4 million people. Little is known about impact of chemicalsentering the estuary via road runoff andstormwater drains on biota inhabiting thesystem. Black bream (Acanthopagrusbutcheri) were collected from seven sites inthe Swan–Canning estuary during August andSeptember 2000, at the end of the winter (wet)season. Serum sorbitol dehydrogenase (s-SDH)was unaffected by the sex of the fish and nosignificant differences were observed betweenthe sites indicating that the measuredethoxyresorufin-O-deethylase (EROD)activity was not hindered by hepatic tissuedamage. The black bream were in an advancedstage of gonad maturation, which affected ERODhepatic activity with lower EROD activity infemale compared to male fish. EROD activityand bile metabolite levels were significantlyhigher at the site closest to the Perth CentralBusiness District, while most downstream sitewas the least impacted, which may be due totidal flushing of the lower estuary by marinewaters. The ratio of naphthalene-type tobenzo(a) pyrene (B(a)P)-typemetabolites suggests that the source ofpetroleum hydrocarbons within the river systemis a mixture polycyclic aromatic hydrocarbons(PAHs) from pyrolytic origin and from unburntfuels. Biomarker levels in the black breamindicate that major roads and drains aresignificant contributors of mixed functionoxygenase (MFO) inducing chemicals includingpolycyclic aromatic hydrocarbons (PAH) into theSwan–Canning estuary and that there is noupstream or downstream gradient in biomarkerresponse.     

Evidence of plant–insect interaction in the Early Cretaceous Flora from the Crato Formation,Araripe Basin,Northeast Brazil

The analysis of insect-plant interaction can be provide paleoecological and paleoenvironmental important data for understanding the co-evolution between plants and insects. Since the appearance of the first evidence of leaves damaged by insects, these organisms have evolved together. In the Araripe Basin, the Crato Formation stands out by having abundance and diversity of fossils species of plants and insects. In this work they are documented interaction records in specimens of ferns, gymnosperms and angiosperms, showing a wide variety of types of interactions. Here we analyze 56 fossil specimens from the collections of the Museum of Paleontology and the Laboratory of Paleontology of the Universidade Regional do Cariri. The types of damage identified in this study is insect galls, leaf margin feeding (herbivory), leaf mines, oviposition of insects and skeletonization, which are present in 19 specimens. This analysis in search for evidences of plant–insect interaction contributes with new interaction patterns for the Crato Formation. Although the low sample rate, the new registers for plant-insect association were compared to records from different cretaceous basins. This suggests new possibilities in the studies for ecological relations and coevolutionary plant-insect during the Cretaceous. In addition, a new type of damage is identified in a pteridophyte.     

Peculiarities of Formation of the Wakefulness—Sleep Cycle in Ontogenesis of Rats

Electrophysiological changes in the wakefulness—sleep cycle were studied in early postnatal ontogenesis of rat pups. EEG was recorded and its spectral power was determined, as well as spatial-temporal synchronization between the brain cortex zones (visual and sensomotor) and hippocampus in the process of sleep at various periods of ontogenesis. These data were compared with the literature data on studying of cytoarchitectonics and ultrastructure of rat neocortex as well as on formation of neuronal activity and maturation of transmitter systems at the same periods. Based on time of formation of interneuronal and interstructural connections and of maturation of transmitter systems, 3 stages of functional development of sleep in ontogenesis were identified: the first stage—undifferentiated sleep, the interneuronal connections are absent; the second stage—partially differentiated sleep, interneuronal connections function and control from subcortical structures appears; the third stage—differentiated sleep, clear division into sleep phase, additional control from all three transmitter systems: noradrenergic, cholinergic, and serotoninergic, action of the latter providing inhibitory mechanisms in CNS.__________Translated from Zhurnal Evolyutsionnoi Biokhimii i Fiziologii, Vol. 41, No. 2, 2005, pp. 154–159.Original Russian Text Copyright © 2005 by Titkov, Aristakesyan, Oganesyan.     

New Discoveries of Phaeophycean Fossils in the Early Cambrian, Haikou,Kunming,Yunnan,Southwest China

The paper deals with the new phaeophycean fossils in the Early Cambrian from Chengjiang Biota at Ercai Village of Haikou, Kunming, Yunnan, Southwest China. Three new taxa, Punctariopsis latifolia gen. et sp. nov., P.simplex gen. et sp. nov. and Vendotaenia cf. antiqua Gnilovskaya are described here in detail. These new findings show that the Chengjiang Biota is high in species diversity of fossil algae and might offer new evidence for a better understanding of the Cambrian explosive biological evolution. The fossil genus described here is found to have a close relationship with the living Punctaria based on similar morphology. The results suggest that the Chengjiang Biota in Haikou area of Kunming was living in an intertidal and subtidal seawater environment.     

Mutagen Formation in the Nitrite—Piperic Acid Reaction

A morphological mutant of Neurospora crassa, which showed great changes in cell wall β-glucan structures, was obtained. The mutant lacked spore-forming ability. Chemical analysis indicated that the mutant cell walls had more carbohydrates and less proteins than the wild type. In the structural polymers of cell walls, heteroglycan and chitin were not apparently changed in their sugar composition and structures. On the other hand, the alkali-soluble β-glucan of this mutant showed significant changes in the chemical structure, particularly, the number and length of branches. The mutant glucan had about 2.5 times as many branches as that from wild type and the number of 1,3-linked glucose residues was greatly reduced.     

The role of bryozoans in fossil reefs—an example from the Middle Devonian of the Western Sahara

Stenolaemate bryozoans with their stable calcitic skeletons play a significant role in reef building. In the Middle Devonian Sabkhat Lafayrina reef complex (Western Sahara), bryozoans are abundant and diverse. Although they do not form part of the principal framework of reefs, bryozoans are involved significantly in reef growth, especially in the initial stage. In this way, bryozoans are important with respect to initiating reef growth. They contribute greatly to sediment stabilization, making it possible for principal reef builders to grow on hardened and stabilized substrates, and also play sediment-baffling and sediment-filling roles. The aim of this study is to document the diversity of bryozoans in a Middle Devonian reef complex and to estimate their potential for initiation and contribution to reef structures.     

On the Use of Distance in the Taxonomic Study of Critical Plant Groups—Case Studies of Western European Orchidaceae

Four distance coefficients are compared on four data sets composed of samples coming from western European populations of the genera Dactylorhiza, Orchis and Epipactis (Orchidaceae). The performance of the distance coefficients is evaluated through: (a) the quality of clusters obtained by five classical methods (as compared to a priori classification), (b) the Mantel statistic with respect to an a priori distance matrix resulting from previous knowledge, (c) the result obtained with the k-means method, and (d) principal coordinate diagrams. It appears that: (a) the Mahalanobis distance based on the pooled dispersion matrix performs best on the whole; (b) a distance based on the recently developed Common Principal Component model, used with a log transformation, also provides useful information and performs best on the largest data set; (c) the Gölz and Reinhard taxonomic distance, widely used among orchidologists, is attractive for its simplicity, yet good performance and the valuable information it provides, despite its theoretical shortcomings. A brief taxonomic discussion is made on the results obtained for the Dactylorhiza samples, especially about samples whose identification was in doubt.     

Microbial–meiofaunal interrelationships in coastal sediments of the Red Sea

Population density and biomass of bacteria and meiofauna were investigated seasonally in the sediments of the north-western bank of Red Sea. Samples of sediments were collected seasonally from three different stations to determine microphytobenthic biomass (chlorophyll a), protein, lipid, carbohydrate, and total organic matter concentrations. These investigations revealed that microbial components tended to increase their dominancy, whereas sensitive meiofauna were extremely reduced during the entire study period. Thus a very low density of the total meiofauna (with an annual average of 109 ± 26 ind./10 cm²) was recorded whilst the benthic microbial population densities exhibited higher values (ranging from 0.31 ± 0.02 × 10⁸ to 43.67 ± 18.62 × 10⁸/g dry sediment). These changes in the relative importance analysis of benthic microbial components versus meiofaunal ones seem to be based on the impact of organic matter accumulation on the function and structure of these benthic communities. Proteins, lipids and carbohydrates showed very low concentration values, and the organic matter mostly consisted of carbohydrates, reflecting lower nutritional values for benthic fauna in general and meiofauna in particular. The distribution of microbial and meiofaunal communities seems to be dependent on the quality of the organic matter rather than on its quantity. Total organic matter concentrations varied between 5.8 and 7.6 mg/g, with organic carbon accounting for only 32% of the total organic matter. Chlorophyll a attained very low values, fluctuating between 0.11 and 0.56 μg/g, indicating the oligotrophy of the studied area. The very low concentration of chlorophyll a in the Red Sea sediment suggests that the sedimentary organic matter, heterotrophic bacteria and/or protozoa constitute an alternative resource that is consumed by meiofauna when algae are less abundant. Protozoa, therefore, represent the “missing link in bacteria–meiofauna interaction in the Red Sea marine sediment ecosystem.     

Growth rates in outbreak populations of the corallivorous gastropod Drupella cornus (Röding 1798) at Ningaloo Reef,Western Australia

Mark and recapture experiments were used to estimate the size-at-age relationship of the coral-eating gastropod Drupella cornus at Ningaloo Reef, Western Australia. Animals 15 mm long increased in length by 5.2 mm in six months at a site in an early stage of an outbreak, but by only 3.8 mm at a site within an established outbreak. Snails larger than 35 mm grew very little. Based on observed growth rates fitted to a Richards function growth equation, snails 28 mm long judged to be reproductively mature would be 2.5 to 3.5 years old, suggesting that local outbreaks represent no more than one or two generations of recruits. Indirect evidence indicates that growth is more rapid in the earlier than in later stages of outbreaking populations. The growth and timing of life-history transitions of D. cornus are not unusual among other muricid species.     

Unprecedented Mass Bleaching and Loss of Coral across 12° of Latitude in Western Australia in 2010–11

Background

Globally, coral bleaching has been responsible for a significant decline in both coral cover and diversity over the past two decades. During the summer of 2010–11, anomalous large-scale ocean warming induced unprecedented levels of coral bleaching accompanied by substantial storminess across more than 12° of latitude and 1200 kilometers of coastline in Western Australia (WA).

Methodology/Principal Findings

Extreme La-Niña conditions caused extensive warming of waters and drove considerable storminess and cyclonic activity across WA from October 2010 to May 2011. Satellite-derived sea surface temperature measurements recorded anomalies of up to 5°C above long-term averages. Benthic surveys quantified the extent of bleaching at 10 locations across four regions from tropical to temperate waters. Bleaching was recorded in all locations across regions and ranged between 17% (±5.5) in the temperate Perth region, to 95% (±3.5) in the Exmouth Gulf of the tropical Ningaloo region. Coincident with high levels of bleaching, three cyclones passed in close proximity to study locations around the time of peak temperatures. Follow-up surveys revealed spatial heterogeneity in coral cover change with four of ten locations recording significant loss of coral cover. Relative decreases ranged between 22%–83.9% of total coral cover, with the greatest losses in the Exmouth Gulf.

Conclusions/Significance

The anomalous thermal stress of 2010–11 induced mass bleaching of corals along central and southern WA coral reefs. Significant coral bleaching was observed at multiple locations across the tropical-temperate divide spanning more than 1200 km of coastline. Resultant spatially patchy loss of coral cover under widespread and high levels of bleaching and cyclonic activity, suggests a degree of resilience for WA coral communities. However, the spatial extent of bleaching casts some doubt over hypotheses suggesting that future impacts to coral reefs under forecast warming regimes may in part be mitigated by southern thermal refugia.     

Kuku—Yalanji Rainforest Aboriginal People and Carbohydrate Resource Management in the Wet Tropics of Queensland, Australia

Carbohydrate food sources have emerged as a critical factor limiting occupation of rainforests by hunter—gatherer peoples globally. In the wet tropics bioregion of northeastern Australia, Kuku–Yalanji aboriginal people occupied the rainforests through a hunter–gatherer subsistence economy prior to European occupation. Collaborative environmental research between a researcher at the James Cook University and Kuku–Yalanji people has established that their fire management protected carbohydrate resources in the fire-sensitive rainforests and their margins, and ensured ongoing access to the critical dry season carbohydrate resource, Cycas media, growing in patches of fire-prone open forest on each clan estate. Carbohydrate resources in the wet season were obtained predominantly from seeds of rainforest tree nuts, a high proportion of which are wet tropics endemic species. Several of the genera utilized by aboriginal people in the wet tropics bioregion also occur in the rainforests of eastern Cape York Peninsula, where they were not utilized as foods. It is hypothesized that use of rainforest seeds for carbohydrate is a cultural adaptation that occurred in the wet tropics bioregion, stimulated by the unique availability of the substantial number of large-seeded rainforest trees that are wet tropics endemics. The implications of these data for concepts about the impact of aboriginal fires on Australian rainforests are considered. Aboriginal fires imposed a fine patterning on the vegetation at the local scale, with little effect on the vegetation at the regional scale, which is determined by environmental factors.     

Sauropod and Small Theropod Tracks from the Lower Jurassic Ziliujing Formation of Zigong City,Sichuan, China,with an Overview of Triassic–Jurassic Dinosaur Fossils and Footprints of the Sichuan Basin

A dinosaur footprint assemblage from the Lower Jurassic Ziliujing Formation of Zigong City, Sichuan, China, comprises about 300 tracks of small tridactyl theropods and large sauropods preserved as concave epireliefs (natural molds). The theropod footprints show similarities with both the ichnogenera Grallator and Jialingpus. Three different morphotypes are present, probably related to different substrate conditions and extramorphological variation. A peculiar preservational feature in a morphotype that reflects a gracile trackmaker with extremely slender digits, is the presence of a convex epirelief that occurs at the bottom of the concave digit impressions. It is possibly the result of sediment compaction underweight load when the pes penetrated the substrate, being a resistant residue during exhumation and weathering. The sauropod tracks belong to a trackway with eight imprints consisting of poorly preserved pes and manus tracks and a better preserved set, probably all undertracks. The narrow-gauge trackway pattern resembles the ichnogenus Parabrontopodus well known from the Jurassic but other features such as the minor heteropody are different. The assemblage enriches the dinosaur record from the famous Zigong locality and the evidence from the Lower Jurassic in this area that was restricted to a few skeletal remains and footprints. Furthermore it proves the presence of small theropods, whereas skeletons of the group, well- known from the Middle-Upper Jurassic of Zigong, are of medium to large size only. Remarkable is the dominance of saurischians in these assemblages, which is characteristic of Jurassic dinosaur communities whereas the Cretaceous record shows an increase of ornithopod groups. An overview of the dinosaur trace and body fossil record of the Sichuan Basin supports this view. The paleoenvironment can be designated as a low-latitude tropical freshwater lake as it is indicated by bivalve shells.     

Occurrence of the Root Rot Pathogen,Fusarium commune,in Forest Nurseries of?the Midwestern and Western United States

Fusarium commune can cause damping‐off and root rot of conifer seedlings in forest nurseries, and this pathogen has been previously reported from Oregon, Idaho, and Washington, USA. We collected Fusarium isolates from additional nurseries in the midwestern and western USA to more fully determine occurrence of this pathogen. We used DNA sequences of the mitochondrial small subunit gene to identify F. commune. In addition to confirming the occurrence of F. commune in Oregon, Idaho, and Washington, USA, we also discovered that F. commune is even more widespread with this first report of F. commune occurring in Nevada, Montana, Nebraska, and Michigan, USA.